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Search of human proteins with 239754405
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754405 PREDICTED: hypothetical protein [Homo sapiens]
(230 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754405 PREDICTED: hypothetical protein [Homo sapiens] 480 e-136
gi|239748958 PREDICTED: hypothetical protein XP_002346866 [Homo ... 477 e-135
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho... 38 0.008
gi|169213067 PREDICTED: hypothetical protein [Homo sapiens] 35 0.070
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 34 0.092
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 34 0.092
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 34 0.092
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 34 0.092
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 34 0.092
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 34 0.092
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 34 0.092
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 34 0.092
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 34 0.092
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 34 0.12
gi|122937440 multiple EGF-like-domains 9 [Homo sapiens] 34 0.12
gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b [... 33 0.16
gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a [H... 33 0.16
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 33 0.16
gi|22749325 zinc finger protein 48 [Homo sapiens] 33 0.16
gi|118402590 myosin XV [Homo sapiens] 33 0.20
gi|239508696 PREDICTED: hypothetical protein [Homo sapiens] 33 0.20
gi|32307166 Rho guanine exchange factor 15 [Homo sapiens] 33 0.20
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 33 0.20
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 33 0.27
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 32 0.35
gi|51093874 proline rich 19 [Homo sapiens] 32 0.35
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 32 0.35
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 32 0.46
>gi|239754405 PREDICTED: hypothetical protein [Homo sapiens]
Length = 230
Score = 480 bits (1236), Expect = e-136
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 1 MYSEIKSACRKQASSCFLKCNLATSRRALGRPIHLFPSPSFPGPRTAGPWRSAPRLHVQR 60
MYSEIKSACRKQASSCFLKCNLATSRRALGRPIHLFPSPSFPGPRTAGPWRSAPRLHVQR
Sbjct: 1 MYSEIKSACRKQASSCFLKCNLATSRRALGRPIHLFPSPSFPGPRTAGPWRSAPRLHVQR 60
Query: 61 GAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAP 120
GAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAP
Sbjct: 61 GAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAP 120
Query: 121 VLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGA 180
VLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGA
Sbjct: 121 VLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGA 180
Query: 181 RVGGLLLYLAFEFSLLQHKGRAGKGGCRTVLVFAQINVRKSGGEEASVGK 230
RVGGLLLYLAFEFSLLQHKGRAGKGGCRTVLVFAQINVRKSGGEEASVGK
Sbjct: 181 RVGGLLLYLAFEFSLLQHKGRAGKGGCRTVLVFAQINVRKSGGEEASVGK 230
>gi|239748958 PREDICTED: hypothetical protein XP_002346866 [Homo
sapiens]
Length = 230
Score = 477 bits (1227), Expect = e-135
Identities = 229/230 (99%), Positives = 229/230 (99%)
Query: 1 MYSEIKSACRKQASSCFLKCNLATSRRALGRPIHLFPSPSFPGPRTAGPWRSAPRLHVQR 60
MYSEIKSACRKQASSCFLKCNLATSRRALGRPIHLFPSPSFPG RTAGPWRSAPRLHVQR
Sbjct: 1 MYSEIKSACRKQASSCFLKCNLATSRRALGRPIHLFPSPSFPGRRTAGPWRSAPRLHVQR 60
Query: 61 GAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAP 120
GAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAP
Sbjct: 61 GAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAP 120
Query: 121 VLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGA 180
VLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGA
Sbjct: 121 VLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGA 180
Query: 181 RVGGLLLYLAFEFSLLQHKGRAGKGGCRTVLVFAQINVRKSGGEEASVGK 230
RVGGLLLYLAFEFSLLQHKGRAGKGGCRTVLVFAQINVRKSGGEEASVGK
Sbjct: 181 RVGGLLLYLAFEFSLLQHKGRAGKGGCRTVLVFAQINVRKSGGEEASVGK 230
>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
sapiens]
Length = 1288
Score = 37.7 bits (86), Expect = 0.008
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 113 PPGPSC------APVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAA 166
PP PS A +LR+ P LR + T+ PFL PG SRSP+ R P+ A
Sbjct: 869 PPMPSSLSAEAQAFLLRTFEPDPRLRASAQTLLGDPFLQPGKRSRSPSSPRHAPRPSDAP 928
Query: 167 RRPP 170
P
Sbjct: 929 SASP 932
>gi|169213067 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 34.7 bits (78), Expect = 0.070
Identities = 49/158 (31%), Positives = 57/158 (36%), Gaps = 32/158 (20%)
Query: 44 PRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTHAF 103
PR P R+APRL + + LR Q + R T A+G GGD R+P F
Sbjct: 116 PRPLRPSRAAPRLRGEEPSLLR----PQLSRRPRALRRSTRVPAAGKGGD--RRAP--VF 167
Query: 104 PFCVPLFPLPPGPSCAPVLRS---------CRSSPLLRVFSFT--------IPRSPFLSP 146
P VPL PPG S R R P + T + R P
Sbjct: 168 PTLVPLHHGPPGASGVGSERDRKFQLHQTPARGPPFPGISGMTRGPVVLSGVNRQHRWPP 227
Query: 147 GTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGARVGG 184
G G PA A RRP RAP R GG
Sbjct: 228 GASPSRSLGEAGGERPARALRRP--RAP-----GRAGG 258
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 34.3 bits (77), Expect = 0.092
Identities = 33/87 (37%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 104 PFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPG-TLSRSPAGSRDPG-N 161
P P LP P P L + R S R S + P P +PG S PA S P
Sbjct: 790 PRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLG 849
Query: 162 PAPAARR---PPLRAPSCHEGARVGGL 185
P PAAR P R S GA GGL
Sbjct: 850 PTPAARAAAPSPDRRDSASPGA-AGGL 875
Score = 28.9 bits (63), Expect = 3.9
Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 107 VPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAA 166
V LFP PP P + F + R P + P L R P PAPAA
Sbjct: 711 VGLFPPPPPPPQVTSAIATLQQAAAMSFCPQVAR-PLVGPLALGSPRLVRRPPPGPAPAA 769
Query: 167 RRPPLRAPSCHEGA 180
P P+ GA
Sbjct: 770 ASPGPPPPASPPGA 783
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 34.3 bits (77), Expect = 0.092
Identities = 45/150 (30%), Positives = 56/150 (37%), Gaps = 16/150 (10%)
Query: 37 PSPSFPG-PRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDT--FGEASGHGGD 93
PS PG P + GP R L V RG L A + G+L GH
Sbjct: 125 PSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGLRGHRAL 184
Query: 94 FLFRSPTHAFPFCVPLFPLP---------PGPSCA---PVLRSCRSSPLLRVFSFTIPRS 141
L SP + P P P P PS A P LRS + + +R+ PR
Sbjct: 185 SLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAP-PRP 243
Query: 142 PFLSPGTLSRSPAGSRDPGNPAPAARRPPL 171
P SPG + + +R G A PPL
Sbjct: 244 PISSPGPIIWVSSPARSLGPLLHALLHPPL 273
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 34.3 bits (77), Expect = 0.092
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 17/89 (19%)
Query: 108 PLFPLPPGPSCA---------PVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRS--PAGS 156
PL+P GP+ A PV R+ R LRV PR+P +P +R+ P +
Sbjct: 18 PLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRG--PRAPSPAPALPARARPPREN 75
Query: 157 RDPGNPAPAARRPPLRAPSCHEGARVGGL 185
R PA AAR PP R G + GG+
Sbjct: 76 RKRAVPARAARGPPKRP----AGGQTGGV 100
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 34.3 bits (77), Expect = 0.092
Identities = 47/160 (29%), Positives = 61/160 (38%), Gaps = 43/160 (26%)
Query: 23 ATSRRALGRPIHLFPSPSF---PGPRTAGPWRSA-PRLHVQRGA-------GLRGACKGQ 71
A S A G P++ +P P P GP RS PR ++ GA G R +C G+
Sbjct: 51 AVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGR 110
Query: 72 AAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAPVLRSCRSSPLL 131
A GRL A+ GG + P L PGP+ P R+SP
Sbjct: 111 AGSAGRLRCSAAALSAAQRGGPARAQVPP-------ALRTFSPGPASPP-----RASPGG 158
Query: 132 RVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPL 171
R PG+ +R +G A ARR PL
Sbjct: 159 R-------------PGSEARGRSG-------AECARRVPL 178
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 34.3 bits (77), Expect = 0.092
Identities = 45/150 (30%), Positives = 56/150 (37%), Gaps = 16/150 (10%)
Query: 37 PSPSFPG-PRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDT--FGEASGHGGD 93
PS PG P + GP R L V RG L A + G+L GH
Sbjct: 125 PSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGLRGHRAL 184
Query: 94 FLFRSPTHAFPFCVPLFPLP---------PGPSCA---PVLRSCRSSPLLRVFSFTIPRS 141
L SP + P P P P PS A P LRS + + +R+ PR
Sbjct: 185 SLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAP-PRP 243
Query: 142 PFLSPGTLSRSPAGSRDPGNPAPAARRPPL 171
P SPG + + +R G A PPL
Sbjct: 244 PISSPGPIIWVSSPARSLGPLLHALLHPPL 273
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 34.3 bits (77), Expect = 0.092
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 17/89 (19%)
Query: 108 PLFPLPPGPSCA---------PVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRS--PAGS 156
PL+P GP+ A PV R+ R LRV PR+P +P +R+ P +
Sbjct: 18 PLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRG--PRAPSPAPALPARARPPREN 75
Query: 157 RDPGNPAPAARRPPLRAPSCHEGARVGGL 185
R PA AAR PP R G + GG+
Sbjct: 76 RKRAVPARAARGPPKRP----AGGQTGGV 100
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 34.3 bits (77), Expect = 0.092
Identities = 47/160 (29%), Positives = 61/160 (38%), Gaps = 43/160 (26%)
Query: 23 ATSRRALGRPIHLFPSPSF---PGPRTAGPWRSA-PRLHVQRGA-------GLRGACKGQ 71
A S A G P++ +P P P GP RS PR ++ GA G R +C G+
Sbjct: 51 AVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGR 110
Query: 72 AAEPGRLAVWDTFGEASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAPVLRSCRSSPLL 131
A GRL A+ GG + P L PGP+ P R+SP
Sbjct: 111 AGSAGRLRCSAAALSAAQRGGPARAQVPP-------ALRTFSPGPASPP-----RASPGG 158
Query: 132 RVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPL 171
R PG+ +R +G A ARR PL
Sbjct: 159 R-------------PGSEARGRSG-------AECARRVPL 178
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 34.3 bits (77), Expect = 0.092
Identities = 45/150 (30%), Positives = 56/150 (37%), Gaps = 16/150 (10%)
Query: 37 PSPSFPG-PRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDT--FGEASGHGGD 93
PS PG P + GP R L V RG L A + G+L GH
Sbjct: 125 PSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSRPRALLHGLRGHRAL 184
Query: 94 FLFRSPTHAFPFCVPLFPLP---------PGPSCA---PVLRSCRSSPLLRVFSFTIPRS 141
L SP + P P P P PS A P LRS + + +R+ PR
Sbjct: 185 SLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAGAIPPLRSHKPTVAVRILPAP-PRP 243
Query: 142 PFLSPGTLSRSPAGSRDPGNPAPAARRPPL 171
P SPG + + +R G A PPL
Sbjct: 244 PISSPGPIIWVSSPARSLGPLLHALLHPPL 273
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 34.3 bits (77), Expect = 0.092
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 17/89 (19%)
Query: 108 PLFPLPPGPSCA---------PVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRS--PAGS 156
PL+P GP+ A PV R+ R LRV PR+P +P +R+ P +
Sbjct: 18 PLYPRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRG--PRAPSPAPALPARARPPREN 75
Query: 157 RDPGNPAPAARRPPLRAPSCHEGARVGGL 185
R PA AAR PP R G + GG+
Sbjct: 76 RKRAVPARAARGPPKRP----AGGQTGGV 100
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 33.9 bits (76), Expect = 0.12
Identities = 39/147 (26%), Positives = 51/147 (34%), Gaps = 18/147 (12%)
Query: 40 SFPGPRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSP 99
S GP PW + P + G R G+ AEPG L GE G ++
Sbjct: 7 SLDGPARGAPWPAEPAPFYEPG---RAGKPGRGAEPGAL------GEP-GAAAPAMYDDE 56
Query: 100 THAFPFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDP 159
+ A F + + + P L C +F+ G L P G P
Sbjct: 57 S-AIDFSAYIDSM----AAVPTLELCHDELFADLFNSNHKAG---GAGPLELLPGGPARP 108
Query: 160 GNPAPAARRPPLRAPSCHEGARVGGLL 186
P PAA R R P +G G LL
Sbjct: 109 LGPGPAAPRLLKREPDWGDGDAPGSLL 135
>gi|122937440 multiple EGF-like-domains 9 [Homo sapiens]
Length = 639
Score = 33.9 bits (76), Expect = 0.12
Identities = 38/158 (24%), Positives = 52/158 (32%), Gaps = 22/158 (13%)
Query: 39 PSFPGPRTAGPWRSAPRLHVQRGAGLRG-ACKGQAAEPGRLAVWDTFGEASGHGGDFLFR 97
PS P PR P APR R R A A P +W T G +S F+
Sbjct: 55 PSHPFPRATAPTAQAPRTGPPRATVHRPLAATSPAQSPETTPLWATAGPSS-----TTFQ 109
Query: 98 SPTHAFPFCVPL---------FPLPPGPSC-------APVLRSCRSSPLLRVFSFTIPRS 141
+P P P P P P+ AP + P P
Sbjct: 110 APLGPSPTTPPAAERTSTTSQAPTRPAPTTLSTTTGPAPTTPVATTVPAPTTPRTPTPDL 169
Query: 142 PFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEG 179
P S ++ +P + P +P P + P + P + G
Sbjct: 170 PSSSNSSVLPTPPATEAPSSPPPGHQWPVAKMPQKYLG 207
>gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b
[Homo sapiens]
Length = 610
Score = 33.5 bits (75), Expect = 0.16
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 153 PAGSRDPGNPAPAARRPPLRAP 174
PAG DP PAPAA RPP+ P
Sbjct: 44 PAGGGDPEAPAPAAERPPVPGP 65
>gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a [Homo
sapiens]
Length = 611
Score = 33.5 bits (75), Expect = 0.16
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 153 PAGSRDPGNPAPAARRPPLRAP 174
PAG DP PAPAA RPP+ P
Sbjct: 44 PAGGGDPEAPAPAAERPPVPGP 65
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 33.5 bits (75), Expect = 0.16
Identities = 33/95 (34%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 95 LFRSPTHAFPFC-VPLFPLPPGPSCAP-VLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRS 152
L RSP C VP+ P P PS P V + SSP +V S +P SP S S
Sbjct: 807 LQRSPETPLEICLVPVGPSPASPSPEPPVSKPVASSPTEQVPSQEMPLLARPSPPVQSVS 866
Query: 153 PAGSRDPGNPA------------PAARRPPLRAPS 175
PA P A P+ PPL+ PS
Sbjct: 867 PAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQPPS 901
>gi|22749325 zinc finger protein 48 [Homo sapiens]
Length = 618
Score = 33.5 bits (75), Expect = 0.16
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 100 THAFP--FCVPLFPLP---PGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPA 154
TH P F P +PLP P P P+ +SP L S + PF PG L P
Sbjct: 380 THMEPQDFSFPGYPLPALIPSPPPPPL----GTSPPLTPRSPSHSGEPFGLPG-LEPEPG 434
Query: 155 GSRDPGNPAPAARRPPLRAPSCHEGAR 181
G + P P A P + P C +G R
Sbjct: 435 GPQAGEPPPPLAGDKPHKCPECGKGFR 461
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 33.1 bits (74), Expect = 0.20
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 32/137 (23%)
Query: 40 SFPGPRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSP 99
+FPGPR P R G G + R W L SP
Sbjct: 737 AFPGPR--------PSFRGSRRRGAAFGFPGASPRASRRRAWSPLASPQPS----LRSSP 784
Query: 100 THAFPFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSR-- 157
+C PL PP P S R+ P F +P P P +L SPA R
Sbjct: 785 --GLGYCSPL--APPSPQL-----SLRTGPFQPPF---LP--PARRPRSLQESPAPRRAA 830
Query: 158 ----DPGNPAPAARRPP 170
PG+P P + RPP
Sbjct: 831 GRLGPPGSPLPGSPRPP 847
>gi|239508696 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 33.1 bits (74), Expect = 0.20
Identities = 45/149 (30%), Positives = 53/149 (35%), Gaps = 26/149 (17%)
Query: 33 IHLFPSPSFPGPRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEASGHGG 92
+H F PS PGP A W L G G+ A P + G AS
Sbjct: 210 VHSFLKPSSPGPGQASRWPLQDELLPSDGISRPQMVSGRWAPPRQ-------GWAS---- 258
Query: 93 DFLFRSPTHAFPFCVPLFPLPPGPSCAPV-----LRSCRSSPLL---RVFSFTIPRSPFL 144
R P A V L PGP+ V L SC + L R FS R+ L
Sbjct: 259 ----RRPPQA---QVVLKSGSPGPASQQVSKLFWLNSCPAPNRLCRPRTFSSQALRAHLL 311
Query: 145 SPGTLSRSPAGSRDPGNPAPAARRPPLRA 173
PG L S G R A + PL+A
Sbjct: 312 PPGGLYSSSTGWRTASAGPALASQGPLQA 340
>gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]
Length = 841
Score = 33.1 bits (74), Expect = 0.20
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 104 PFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPA 163
P C P+F PP S P S+ + S T P SP +P + SP SR +P
Sbjct: 56 PMCTPIFWEPPAASLKPPALLPPSASRASLDSQTSPDSPSSTP---TPSPV-SRRSASPE 111
Query: 164 PAARRP 169
PA R P
Sbjct: 112 PAPRSP 117
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 33.1 bits (74), Expect = 0.20
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 36 FPSPSFPGPRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGE---ASGHGG 92
+P+P+ PGP GP+ P + GA AA G L W + A G GG
Sbjct: 102 YPAPTVPGPGPTGPY-PTPNMPFPELPRPYGAPTDPAA-AGPLGPWGSMSSGPWAPGMGG 159
Query: 93 DFLFRSPTHAFPFCVPLFPLPPGPSCAP 120
+ + + P P P P P AP
Sbjct: 160 QYPTPNMPYPSPGPYPAPPPPQAPGAAP 187
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 32.7 bits (73), Expect = 0.27
Identities = 36/112 (32%), Positives = 43/112 (38%), Gaps = 22/112 (19%)
Query: 87 ASGHGGDFLFRSPTHAFPFCVPLFPLPPGPSCAPVLRS------C--RSSPLL------- 131
+ G GG + A P V PL PGP AP+ RS C R S +
Sbjct: 365 SEGDGGAAAGAAAAGARPVSVAGSPLSPGPVRAPLSRSHTLSGGCGGRGSKVALLPAGGA 424
Query: 132 ----RVFSFTIPRSP--FLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCH 177
R S + SP SPG+LS S +G P P PPL P H
Sbjct: 425 LQHSRSMSMPVAHSPPAATSPGSLS-SSSGHGSGSYPPPPGPHPPLPHPLHH 475
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 32.3 bits (72), Expect = 0.35
Identities = 42/133 (31%), Positives = 48/133 (36%), Gaps = 28/133 (21%)
Query: 42 PGPRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTH 101
P P A P APR +R A R + AA+P R + G G GGD P
Sbjct: 50 PAPAAAHP--PAPR---ERPAAARLSALA-AAQPRRRSP----GPQGGGGGDIASPLPPA 99
Query: 102 AFPFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGN 161
P P P P P P + SSP R + P P L P L
Sbjct: 100 LQPRGAPAVPAAPSPGPLP---ARPSSPPPRPSLPSGPHRPVLPPSAL------------ 144
Query: 162 PAPAARRPPLRAP 174
AA RPPL P
Sbjct: 145 ---AAPRPPLARP 154
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 32.3 bits (72), Expect = 0.35
Identities = 42/133 (31%), Positives = 48/133 (36%), Gaps = 28/133 (21%)
Query: 42 PGPRTAGPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDFLFRSPTH 101
P P A P APR +R A R + AA+P R + G G GGD P
Sbjct: 50 PAPAAAHP--PAPR---ERPAAARLSALA-AAQPRRRSP----GPQGGGGGDIASPLPPA 99
Query: 102 AFPFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGN 161
P P P P P P + SSP R + P P L P L
Sbjct: 100 LQPRGAPAVPAAPSPGPLP---ARPSSPPPRPSLPSGPHRPVLPPSAL------------ 144
Query: 162 PAPAARRPPLRAP 174
AA RPPL P
Sbjct: 145 ---AAPRPPLARP 154
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 32.3 bits (72), Expect = 0.35
Identities = 43/166 (25%), Positives = 49/166 (29%), Gaps = 32/166 (19%)
Query: 38 SPSFPGPRTA---GPWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEASGHGGDF 94
SP GP+ G W H+ G G A E +A GE GG F
Sbjct: 67 SPVLRGPQAPLRPGGWAPDGLKHLWAPTGRPGVPNTAAGEDADVAACPRRGEEEEGGGGF 126
Query: 95 LFRSPTHAFPFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSP-------- 146
P C P P P S S+P R P SP
Sbjct: 127 ----PHFGVRSCAPPGRCPAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRP 182
Query: 147 ----GTLSRSPAG-------------SRDPGNPAPAARRPPLRAPS 175
LS PAG + GNP PAA P +PS
Sbjct: 183 PSPPAGLSTEPAGPGTAPRPFLPGQPAEVDGNPPPAAPEAPAASPS 228
>gi|51093874 proline rich 19 [Homo sapiens]
Length = 356
Score = 32.3 bits (72), Expect = 0.35
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 127 SSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPPLRAPSCHEGARVGGLL 186
SS L S T+P P SPG SRD N P P PS E + VG LL
Sbjct: 91 SSGTLVPGSPTLPAKPSPSPGRAQEPAPRSRDKENQVPGGSGP--GPPSSPELSGVGQLL 148
Query: 187 LYLAFEFSLLQ 197
L + SL Q
Sbjct: 149 AELQCQLSLPQ 159
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 32.3 bits (72), Expect = 0.35
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 111 PLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRSPAGSRDPGNPAPAARRPP 170
P PGP+ P R+ R++PL P +P P PAG R PA AAR PP
Sbjct: 159 PPSPGPA-QPGPRAQRAAPLAAP-----PPAPAAPPAVAP--PAGPRRAPPPAVAAREPP 210
Query: 171 LRAP 174
L P
Sbjct: 211 LPPP 214
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 32.0 bits (71), Expect = 0.46
Identities = 41/134 (30%), Positives = 47/134 (35%), Gaps = 11/134 (8%)
Query: 39 PSFPGPRTAG-PWRSAPRLHVQRGAGLRGACKGQAAEPGRLAVWDTFGEAS-----GHGG 92
P FPG + G P S+P + AG GA + E L FGE G GG
Sbjct: 37 PDFPGNSSPGLPSSSSPGRDLGAPAGSMGAA---SCEDEELEFKLVFGEEKEAPPLGAGG 93
Query: 93 DFLFRSPTHAFPFCVPLFPLPPGPSCAPVLRSCRSSPLLRVFSFTIPRSPFLSPGTLSRS 152
A P C PP AP+ P R + P P SPGT
Sbjct: 94 LGEELDSEDAPPCCRLALGEPPPYGAAPI--GIPRPPPPRPGMHSPPPRPAPSPGTWESQ 151
Query: 153 PAGSRDPGNPAPAA 166
PA S G P A
Sbjct: 152 PARSVRLGGPGGGA 165
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,807,868
Number of Sequences: 37866
Number of extensions: 740904
Number of successful extensions: 3750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 3590
Number of HSP's gapped (non-prelim): 333
length of query: 230
length of database: 18,247,518
effective HSP length: 99
effective length of query: 131
effective length of database: 14,498,784
effective search space: 1899340704
effective search space used: 1899340704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.