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Search of human proteins with 239754287
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754287 PREDICTED: hypothetical protein [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754287 PREDICTED: hypothetical protein [Homo sapiens] 511 e-145
gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo ... 511 e-145
gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo ... 511 e-145
gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo ... 511 e-145
gi|239740804 PREDICTED: hypothetical protein [Homo sapiens] 511 e-145
gi|239740753 PREDICTED: hypothetical protein [Homo sapiens] 511 e-145
gi|239513961 PREDICTED: hypothetical protein [Homo sapiens] 511 e-145
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 41 0.001
gi|37595553 ring finger protein 111 [Homo sapiens] 40 0.002
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 40 0.002
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 40 0.002
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 40 0.002
gi|4503657 forkhead box H1 [Homo sapiens] 39 0.004
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 39 0.004
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.004
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 39 0.005
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 39 0.005
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ... 38 0.009
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 38 0.009
gi|241982780 programmed cell death 6 interacting protein isoform... 37 0.012
gi|22027538 programmed cell death 6 interacting protein isoform ... 37 0.012
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 37 0.012
gi|146134388 YLP motif containing 1 [Homo sapiens] 37 0.016
gi|110349719 titin isoform N2-A [Homo sapiens] 37 0.020
gi|110349717 titin isoform novex-2 [Homo sapiens] 37 0.020
gi|110349713 titin isoform novex-1 [Homo sapiens] 37 0.020
gi|110349715 titin isoform N2-B [Homo sapiens] 37 0.020
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 37 0.020
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.020
>gi|239754287 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 511 bits (1317), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
Query: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
Query: 241 KSS 243
KSS
Sbjct: 241 KSS 243
>gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo
sapiens]
Length = 243
Score = 511 bits (1317), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
Query: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
Query: 241 KSS 243
KSS
Sbjct: 241 KSS 243
>gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo
sapiens]
Length = 243
Score = 511 bits (1317), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
Query: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
Query: 241 KSS 243
KSS
Sbjct: 241 KSS 243
>gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo
sapiens]
Length = 243
Score = 511 bits (1317), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
Query: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
Query: 241 KSS 243
KSS
Sbjct: 241 KSS 243
>gi|239740804 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 511 bits (1317), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
Query: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
Query: 241 KSS 243
KSS
Sbjct: 241 KSS 243
>gi|239740753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 511 bits (1317), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
Query: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
Query: 241 KSS 243
KSS
Sbjct: 241 KSS 243
>gi|239513961 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 511 bits (1317), Expect = e-145
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1 MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
Query: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61 PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
Query: 241 KSS 243
KSS
Sbjct: 241 KSS 243
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/116 (32%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 25 PPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIV 84
PPPP S P P+R R + P P P AP P PPP +R +V +
Sbjct: 288 PPPPPPPHNSGPPPPPAR--GRGAPPPPPSRAPTAAP--PPPPP--------SRPSVAVP 335
Query: 85 GSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP 140
+ PALPS+A S G P P + L G P PP PP P
Sbjct: 336 PPPPNRMYPPPPPALPSSAPS----GPP--PPPPSVLGVGPVAPPPPPPPPPPPGP 385
Score = 35.4 bits (80), Expect = 0.045
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
P P A PPPP + ++P P+R P P + P++AP P PPP +
Sbjct: 310 PPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMY-----PPPPPALPSSAPSGPPPPPPS 364
Query: 71 I 71
+
Sbjct: 365 V 365
Score = 29.3 bits (64), Expect = 3.2
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
P S P V + PPPP + P A PS + P P S P P PPP
Sbjct: 326 PPSRPSVAVP----PPPPNRMYPPPPPALPSSA--PSGPPPPPPSVLGVGPVAPPPPPPP 379
Query: 71 IPFP 74
P P
Sbjct: 380 PPPP 383
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Query: 12 SSLPCVGIAAVAEP---PPPFQNRRSI------PSARPSRQLRRNSSAPGPLSTPNTAPH 62
SS+ G + VA+P PPP + S P A +R L +SA P S N P
Sbjct: 616 SSIDGYGSSMVAQPQPQPPPQPSLSSCRHYMPPPYASLTRPLHHQASAC-PHSHGNPPPQ 674
Query: 63 TPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEP---ALPSAAESPGGLGSPHRPVQHN 119
T PP + PH + SH H P +AA P L H+P+ H+
Sbjct: 675 TQPPPQVDYVIPHPVHAFHSQISSHATSHPVAPPPPTHLASTAAPIPQHLPPTHQPISHH 734
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 39.7 bits (91), Expect = 0.002
Identities = 42/190 (22%), Positives = 65/190 (34%), Gaps = 28/190 (14%)
Query: 8 STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA--------PGPLSTPNT 59
S++P + + P P N S+ + L+ A P P S P
Sbjct: 144 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPG 203
Query: 60 APHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHN 119
P P P P +G+ P+A+++P +P PV H
Sbjct: 204 TPQLPTPGPTPSATAVPPQGS-------------------PTASQAPNQPQAPTAPVPHT 244
Query: 120 PLSWGEAV-PLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATK 178
+ A+ P PP PP P+ L L+ S+GQ A + + P + +
Sbjct: 245 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ 304
Query: 179 EGLTLQKTVP 188
G LQ P
Sbjct: 305 AGPLLQHPGP 314
Score = 36.6 bits (83), Expect = 0.020
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
P+S P G+ VA P PPF +P P S STP P T PPC+
Sbjct: 463 PASHPPTGLHQVA-PQPPFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCS 517
Query: 71 IPFPHAARGNVLIVGSHV-LQHLDRKEPALPSAAESPGGLGSPHRP 115
AA G + GS L + KE AL A E P P
Sbjct: 518 ---GAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 560
Score = 34.3 bits (77), Expect = 0.10
Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 21/155 (13%)
Query: 2 AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAP 61
A+++ LP +A PPP +P+ + + + S P P S P
Sbjct: 352 ALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKH-PPHLSGPSPFSMNANLP 410
Query: 62 HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGS----PHRPVQ 117
PPP P + + LQ + + +P LPS+ P GL P P
Sbjct: 411 ----PPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLTQSQNLPPPPAS 465
Query: 118 HNPLSWGEA-----------VPLGPPGDKPPAWPA 141
H P + VP GPP PP P+
Sbjct: 466 HPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPS 500
Score = 31.6 bits (70), Expect = 0.65
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 42/161 (26%)
Query: 21 AVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN--TAPHTPVP----------PP 68
A A P Q S + + + R P PL+ P+ P TP+P PP
Sbjct: 336 AAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 395
Query: 69 -----------CNIPFPHAARGNVLIVGSH-------VLQHLDRKEPALPSAAESPGGL- 109
N+P P A + + H LQ + + +P LPS+ P GL
Sbjct: 396 HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLT 454
Query: 110 ---GSPHRPVQHNPLSWGEAVPLGP-------PGDKPPAWP 140
P P H P + P P PG PP P
Sbjct: 455 QSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 495
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 39.7 bits (91), Expect = 0.002
Identities = 42/190 (22%), Positives = 65/190 (34%), Gaps = 28/190 (14%)
Query: 8 STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA--------PGPLSTPNT 59
S++P + + P P N S+ + L+ A P P S P
Sbjct: 698 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPG 757
Query: 60 APHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHN 119
P P P P +G+ P+A+++P +P PV H
Sbjct: 758 TPQLPTPGPTPSATAVPPQGS-------------------PTASQAPNQPQAPTAPVPHT 798
Query: 120 PLSWGEAV-PLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATK 178
+ A+ P PP PP P+ L L+ S+GQ A + + P + +
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ 858
Query: 179 EGLTLQKTVP 188
G LQ P
Sbjct: 859 AGPLLQHPGP 868
Score = 36.6 bits (83), Expect = 0.020
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
P+S P G+ VA P PPF +P P S STP P T PPC+
Sbjct: 1017 PASHPPTGLHQVA-PQPPFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCS 1071
Query: 71 IPFPHAARGNVLIVGSHV-LQHLDRKEPALPSAAESPGGLGSPHRP 115
AA G + GS L + KE AL A E P P
Sbjct: 1072 ---GAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 1114
Score = 34.3 bits (77), Expect = 0.10
Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 21/155 (13%)
Query: 2 AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAP 61
A+++ LP +A PPP +P+ + + + S P P S P
Sbjct: 906 ALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKH-PPHLSGPSPFSMNANLP 964
Query: 62 HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGS----PHRPVQ 117
PPP P + + LQ + + +P LPS+ P GL P P
Sbjct: 965 ----PPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLTQSQNLPPPPAS 1019
Query: 118 HNPLSWGEA-----------VPLGPPGDKPPAWPA 141
H P + VP GPP PP P+
Sbjct: 1020 HPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPS 1054
Score = 31.6 bits (70), Expect = 0.65
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 42/161 (26%)
Query: 21 AVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN--TAPHTPVP----------PP 68
A A P Q S + + + R P PL+ P+ P TP+P PP
Sbjct: 890 AAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 949
Query: 69 -----------CNIPFPHAARGNVLIVGSH-------VLQHLDRKEPALPSAAESPGGL- 109
N+P P A + + H LQ + + +P LPS+ P GL
Sbjct: 950 HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLT 1008
Query: 110 ---GSPHRPVQHNPLSWGEAVPLGP-------PGDKPPAWP 140
P P H P + P P PG PP P
Sbjct: 1009 QSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1049
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 39.7 bits (91), Expect = 0.002
Identities = 42/190 (22%), Positives = 65/190 (34%), Gaps = 28/190 (14%)
Query: 8 STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA--------PGPLSTPNT 59
S++P + + P P N S+ + L+ A P P S P
Sbjct: 698 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPG 757
Query: 60 APHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHN 119
P P P P +G+ P+A+++P +P PV H
Sbjct: 758 TPQLPTPGPTPSATAVPPQGS-------------------PTASQAPNQPQAPTAPVPHT 798
Query: 120 PLSWGEAV-PLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATK 178
+ A+ P PP PP P+ L L+ S+GQ A + + P + +
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ 858
Query: 179 EGLTLQKTVP 188
G LQ P
Sbjct: 859 AGPLLQHPGP 868
Score = 36.6 bits (83), Expect = 0.020
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
P+S P G+ VA P PPF +P P S STP P T PPC+
Sbjct: 1017 PASHPPTGLHQVA-PQPPFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCS 1071
Query: 71 IPFPHAARGNVLIVGSHV-LQHLDRKEPALPSAAESPGGLGSPHRP 115
AA G + GS L + KE AL A E P P
Sbjct: 1072 ---GAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 1114
Score = 34.3 bits (77), Expect = 0.10
Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 21/155 (13%)
Query: 2 AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAP 61
A+++ LP +A PPP +P+ + + + S P P S P
Sbjct: 906 ALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKH-PPHLSGPSPFSMNANLP 964
Query: 62 HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGS----PHRPVQ 117
PPP P + + LQ + + +P LPS+ P GL P P
Sbjct: 965 ----PPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLTQSQNLPPPPAS 1019
Query: 118 HNPLSWGEA-----------VPLGPPGDKPPAWPA 141
H P + VP GPP PP P+
Sbjct: 1020 HPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPS 1054
Score = 31.6 bits (70), Expect = 0.65
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 42/161 (26%)
Query: 21 AVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN--TAPHTPVP----------PP 68
A A P Q S + + + R P PL+ P+ P TP+P PP
Sbjct: 890 AAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 949
Query: 69 -----------CNIPFPHAARGNVLIVGSH-------VLQHLDRKEPALPSAAESPGGL- 109
N+P P A + + H LQ + + +P LPS+ P GL
Sbjct: 950 HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLT 1008
Query: 110 ---GSPHRPVQHNPLSWGEAVPLGP-------PGDKPPAWP 140
P P H P + P P PG PP P
Sbjct: 1009 QSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1049
>gi|4503657 forkhead box H1 [Homo sapiens]
Length = 365
Score = 38.9 bits (89), Expect = 0.004
Identities = 50/168 (29%), Positives = 62/168 (36%), Gaps = 33/168 (19%)
Query: 25 PPPPFQNRRSIPS-------ARPSRQLRRNSSAPGPLSTPNTA----PHTPVP------- 66
PPPP SI S P L SS P P T N+ P P+P
Sbjct: 159 PPPPPSEGFSIKSLLGGSGEGAPWPGLAPQSS-PVPAGTGNSGEEAVPTPPLPSSERPLW 217
Query: 67 PPCNIPFPHAARGNVL---IVGSHVLQHLDRKEPA-LPSAAESPGGLGSP-HR------- 114
P C +P P G + +G L R P L PGG S HR
Sbjct: 218 PLCPLPGPTRVEGETVQGGAIGPSTLSPEPRAWPLHLLQGTAVPGGRSSGGHRASLWGQL 277
Query: 115 PVQHNPLSWGEAV-PLGPPGDKPPAWPARKQSLWGLS-ESSGQLGALC 160
P + P+ V PL PP P P+ + WG++ E+ G G LC
Sbjct: 278 PTSYLPIYTPNVVMPLAPPPTSCPQCPSTSPAYWGVAPETRGPPGLLC 325
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 38.9 bits (89), Expect = 0.004
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 22/154 (14%)
Query: 11 PSSLPCVGIAAVAEPPPPFQ----NRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHT-PV 65
P++ P G + P P Q + +PS P+R R S P +S P + P P
Sbjct: 763 PAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPC 822
Query: 66 PPPCNIPFPHAARGNVLIVGSHVLQH-LDRKEPALPSAAESPGGLGSPHRPVQHNPLSWG 124
PPP P + G V+Q+ L PA A +PG P RP P
Sbjct: 823 PPPQAPP---------TLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEG-- 871
Query: 125 EAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGA 158
PL P PP+ + ++ SE+S +L A
Sbjct: 872 ---PLPPAPHLPPS--STSSAVASSSETSSRLPA 900
Score = 34.3 bits (77), Expect = 0.10
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 26 PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFP--HAARGNVLI 83
P + S+ P + ++ SA GP + + PPP P P A+G L
Sbjct: 687 PTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLG 746
Query: 84 VGSHVLQHLDRKEPALPSAA--ESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPA 141
+ Q P +P+AA + PG SP P Q PL +P P P P+
Sbjct: 747 PQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQ-APLGDSPHLPSPHPTRPPSRPPS 805
Query: 142 RKQSL 146
R QS+
Sbjct: 806 RPQSV 810
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.9 bits (89), Expect = 0.004
Identities = 32/107 (29%), Positives = 37/107 (34%), Gaps = 20/107 (18%)
Query: 45 RRNSSAPGPLSTPNTAPH---------TPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRK 95
RR ++ P P P AP TP PPP P AA R
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA-----------PRA 151
Query: 96 EPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPAR 142
A +A SPG R + PL+ P PP PPA P R
Sbjct: 152 AAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRR 198
Score = 36.2 bits (82), Expect = 0.027
Identities = 39/139 (28%), Positives = 51/139 (36%), Gaps = 33/139 (23%)
Query: 11 PSSLPCVGIAAV-----AEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPV 65
P P AA A PPPP + +A P+R AP + TAP +P
Sbjct: 115 PRGAPAAAAAAAPPPTPAPPPPP----APVAAAAPAR-------APRAAAAAATAPPSPG 163
Query: 66 PPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWGE 125
P P P A R L A P A +P + P P + P +
Sbjct: 164 PAQ---PGPRAQRAAPLA--------------APPPAPAAPPAVAPPAGPRRAPPPAVAA 206
Query: 126 AVPLGPPGDKPPAWPARKQ 144
P PP +PPA P ++Q
Sbjct: 207 REPPLPPPPQPPAPPQQQQ 225
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.5 bits (88), Expect = 0.005
Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 29/133 (21%)
Query: 25 PPPPFQNRRSIPSA-RPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC--NIPFPHAARGNV 81
PPPP N+ +PS RPS +S AP P P+ P+PP N P + N+
Sbjct: 284 PPPPQNNKPPVPSTPRPS----ASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL 339
Query: 82 LIVGSHVLQHLDRKEPALPSAAES----PGGLGSPHRPVQHNPLSWGEAVPLGPP----- 132
L P LPS S P P PV+ P G + PL PP
Sbjct: 340 ---------SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP---GRSGPLPPPPPVSR 387
Query: 133 -GDKPPAWPARKQ 144
G A PA Q
Sbjct: 388 NGSTSRALPATPQ 400
Score = 36.6 bits (83), Expect = 0.020
Identities = 44/153 (28%), Positives = 55/153 (35%), Gaps = 25/153 (16%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN---TAPHT---- 63
P P + PP P +NR +P RP + +S P STP ++PH
Sbjct: 147 PGRFPVPSPGHRSGPPEPQRNR--MPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSP 204
Query: 64 --------PVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPAL--PSAAESPGGL---- 109
P P P PFP RG L GS L P P +P
Sbjct: 205 PVPGGPRQPSPGPTPPPFP-GNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDK 263
Query: 110 -GSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPA 141
P PV + P EAVP PP + P P+
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296
Score = 30.4 bits (67), Expect = 1.5
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 33/129 (25%)
Query: 26 PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVG 85
PP ++ + P + PS R +PG S P +PPP
Sbjct: 130 PPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPP----------------- 172
Query: 86 SHVLQHLDRKEPALPSAAES-PGGLGSPHRPVQHNPLSWGE-AVPLGP----PGDKPPAW 139
P + S +S P + S RP+Q +P + G VP GP PG PP +
Sbjct: 173 ----------RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPF 222
Query: 140 PARKQSLWG 148
P + + G
Sbjct: 223 PGNRGTALG 231
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 38.5 bits (88), Expect = 0.005
Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 29/133 (21%)
Query: 25 PPPPFQNRRSIPSA-RPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC--NIPFPHAARGNV 81
PPPP N+ +PS RPS +S AP P P+ P+PP N P + N+
Sbjct: 284 PPPPQNNKPPVPSTPRPS----ASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL 339
Query: 82 LIVGSHVLQHLDRKEPALPSAAES----PGGLGSPHRPVQHNPLSWGEAVPLGPP----- 132
L P LPS S P P PV+ P G + PL PP
Sbjct: 340 ---------SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP---GRSGPLPPPPPVSR 387
Query: 133 -GDKPPAWPARKQ 144
G A PA Q
Sbjct: 388 NGSTSRALPATPQ 400
Score = 36.6 bits (83), Expect = 0.020
Identities = 44/153 (28%), Positives = 55/153 (35%), Gaps = 25/153 (16%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN---TAPHT---- 63
P P + PP P +NR +P RP + +S P STP ++PH
Sbjct: 147 PGRFPVPSPGHRSGPPEPQRNR--MPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSP 204
Query: 64 --------PVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPAL--PSAAESPGGL---- 109
P P P PFP RG L GS L P P +P
Sbjct: 205 PVPGGPRQPSPGPTPPPFP-GNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDK 263
Query: 110 -GSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPA 141
P PV + P EAVP PP + P P+
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296
Score = 30.4 bits (67), Expect = 1.5
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 33/129 (25%)
Query: 26 PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVG 85
PP ++ + P + PS R +PG S P +PPP
Sbjct: 130 PPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPP----------------- 172
Query: 86 SHVLQHLDRKEPALPSAAES-PGGLGSPHRPVQHNPLSWGE-AVPLGP----PGDKPPAW 139
P + S +S P + S RP+Q +P + G VP GP PG PP +
Sbjct: 173 ----------RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPF 222
Query: 140 PARKQSLWG 148
P + + G
Sbjct: 223 PGNRGTALG 231
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 38.1 bits (87), Expect = 0.007
Identities = 38/114 (33%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 45 RRNSSAPGPLSTPNTAPHTPVPPPC-NIPFPHAARGNVLIVGS----HVLQHLDRKEPAL 99
R +S APG TP T +P PP C P P A+ V G+ H R PAL
Sbjct: 21 RHSSRAPGT-RTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPAR--PAL 77
Query: 100 PSAAESPGGLG----------SPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARK 143
+PG G S P+ H PL G + G PG PP P+R+
Sbjct: 78 RGETPAPGRRGRATTRGEVQPSVRPPLSHRPLR-GGGMGRGRPGKGPPPNPSRR 130
>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
sapiens]
Length = 271
Score = 37.7 bits (86), Expect = 0.009
Identities = 43/130 (33%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 15 PCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFP 74
P + ++ P P + +SI +RP R +R PGP AP C P P
Sbjct: 91 PALPVSVAVPPCPACRGPQSISRSRPRRAVR---PRPGPWP---AAPSRGPVRSCRGPRP 144
Query: 75 HAARGN---VLIVGS-HVLQHLDRKEPALPSAAE---SPGGLGSPHRPVQHNPLSWGEAV 127
A G+ VL GS Q A PSA E S GLGSP + N + E+
Sbjct: 145 GRALGSLPLVLPAGSCGSCQEDSLGNQARPSALEIGASGVGLGSPAPSNRRNRYAPPES- 203
Query: 128 PLGPPGDKPP 137
P G P KPP
Sbjct: 204 PKGSPSAKPP 213
Score = 32.0 bits (71), Expect = 0.50
Identities = 40/163 (24%), Positives = 52/163 (31%), Gaps = 26/163 (15%)
Query: 36 PSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRK 95
PS +PS Q R+ P L AP +P +P A RG I S
Sbjct: 64 PSLKPSAQCVRSPGVPRSLGGLCRAPDPALPVSVAVPPCPACRGPQSISRSR-------- 115
Query: 96 EPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQ 155
P R V+ P W A GP P R L +G
Sbjct: 116 ----------------PRRAVRPRPGPWPAAPSRGPVRSCRGPRPGRALGSLPLVLPAGS 159
Query: 156 LGALCRRRTARKWRRPQLRRATKEGLTLQKTVPDLRHRRQYSP 198
G+ C+ + RP G+ L P R R +Y+P
Sbjct: 160 CGS-CQEDSLGNQARPSALEIGASGVGLGSPAPSNR-RNRYAP 200
Score = 28.1 bits (61), Expect = 7.2
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 12/73 (16%)
Query: 11 PSSLPCVGIAAVAEPPPPFQNRRS----------IPSARPSRQLRRNSSAPGPLSTPNTA 60
PS+L +G + V P NRR+ PSA+P R SA P STP
Sbjct: 174 PSALE-IGASGVGLGSPAPSNRRNRYAPPESPKGSPSAKPPRACSDTFSARQPASTPKAL 232
Query: 61 P-HTPVPPPCNIP 72
P P P +P
Sbjct: 233 PGGCPGDPELGLP 245
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 37.7 bits (86), Expect = 0.009
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 5 TDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTP 64
T ++ EPSS P + PP P R P ARP + P P P P
Sbjct: 2360 TPLALEPSSTP----GSKKSPPEPVDKRAKAPKARP--------APPQPSPAPPAFTSCP 2407
Query: 65 VPPP-CNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRP 115
P P +P P + L + R +P AAE G G P RP
Sbjct: 2408 APEPFAELPAPATS----LAPAPLITMPATRPKPKKARAAEESGAKG-PRRP 2454
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 37.4 bits (85), Expect = 0.012
Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 42/148 (28%)
Query: 5 TDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTP 64
T + P ++P A PPPP PSA + ++AP P TP +AP
Sbjct: 743 TPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAP--- 799
Query: 65 VPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWG 124
P A+G P P+ PG P P+ +NP ++G
Sbjct: 800 ---------PPQAQG-----------------PPYPTYPGYPGYCQMP-MPMGYNPYAYG 832
Query: 125 E-AVPLGP-----------PGDKPPAWP 140
+ +P P PG + P++P
Sbjct: 833 QYNMPYPPVYHQSPGQAPYPGPQQPSYP 860
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 37.4 bits (85), Expect = 0.012
Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 42/148 (28%)
Query: 5 TDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTP 64
T + P ++P A PPPP PSA + ++AP P TP +AP
Sbjct: 738 TPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAP--- 794
Query: 65 VPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWG 124
P A+G P P+ PG P P+ +NP ++G
Sbjct: 795 ---------PPQAQG-----------------PPYPTYPGYPGYCQMP-MPMGYNPYAYG 827
Query: 125 E-AVPLGP-----------PGDKPPAWP 140
+ +P P PG + P++P
Sbjct: 828 QYNMPYPPVYHQSPGQAPYPGPQQPSYP 855
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 37.4 bits (85), Expect = 0.012
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 2 AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA---PGPLSTPN 58
A++T +++ LP + + PPPP + I +++PS Q+ NS+A P ++ P
Sbjct: 1106 AIKTIATSDDELLPDRPL--LPPPPPPQGSGPGISNSQPS-QMHLNSAAAQSPMGMNLPG 1162
Query: 59 TAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRK---EPALPSAAESPGGLGSPHRP 115
P + PPP +P P +GS++ H + + P S +PGG S + P
Sbjct: 1163 QQPLSHEPPPAMLPSPTP-------LGSNIPLHPNAQGTGGPPQNSMMMAPGGPDSLNAP 1215
Query: 116 VQHNPLSWGEAVPLGPPGDKP 136
P S + +P P +P
Sbjct: 1216 CGPVPSS-SQMMPFPPRLQQP 1235
Score = 28.5 bits (62), Expect = 5.5
Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Query: 51 PGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPS---AAESPG 107
P PLSTP+ PPP P P A G+ D + P+ AA + G
Sbjct: 288 PLPLSTPSAGTPQSQPPPLPPP-PPPAPGSAPPALPPEGPPEDSSQDLAPNSVGAASTGG 346
Query: 108 GLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP 140
G G H + P + PL PPG P + P
Sbjct: 347 GTGGTH---PNTPTATTANNPL-PPGGDPSSAP 375
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 37.0 bits (84), Expect = 0.016
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 26 PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPP 68
PPP R P +P + R S+ P S P T P P+PPP
Sbjct: 1507 PPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPP 1549
Score = 34.3 bits (77), Expect = 0.10
Identities = 42/140 (30%), Positives = 53/140 (37%), Gaps = 11/140 (7%)
Query: 6 DVSTEPSSLPCVGIAAVAEPPPPFQNRRSI--PSARPSRQLRRNSSAPGPLSTPNTAPHT 63
+ S+ P P G + PPP + SI PSA P+R + P P+ P P
Sbjct: 1498 NTSSRPGMYPPPG--SYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPL 1555
Query: 64 PVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAES-----PGGLGSPHRPVQH 118
P PPP P A S E L S +S P P PV H
Sbjct: 1556 PPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPV-H 1614
Query: 119 NPLSWGEAVPLG-PPGDKPP 137
+ + VP+G PP KPP
Sbjct: 1615 SSIPPPGPVPMGMPPMSKPP 1634
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 10 EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
EP L V AV EPPPP + + +R P P P P P+P P
Sbjct: 10965 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 11020
Query: 70 NIPFPHA 76
P P A
Sbjct: 11021 PKPKPEA 11027
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 10 EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
EP L V AV EPPPP + + +R P P P P P+P P
Sbjct: 4660 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 4715
Query: 70 NIPFPHA 76
P P A
Sbjct: 4716 PKPKPEA 4722
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 10 EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
EP L V AV EPPPP + + +R P P P P P+P P
Sbjct: 4593 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 4648
Query: 70 NIPFPHA 76
P P A
Sbjct: 4649 PKPKPEA 4655
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 36.6 bits (83), Expect = 0.020
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 10 EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
EP L V AV EPPPP + + +R P P P P P+P P
Sbjct: 4468 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 4523
Query: 70 NIPFPHA 76
P P A
Sbjct: 4524 PKPKPEA 4530
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 36.6 bits (83), Expect = 0.020
Identities = 38/149 (25%), Positives = 46/149 (30%), Gaps = 21/149 (14%)
Query: 10 EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
EP G+ PP P R + PS + PGP P P P
Sbjct: 1286 EPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGA----AGPPGPKGPPGDDGPKGSPGPV 1341
Query: 70 NIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQH-NPLSWGEAVP 128
P G EP PG G P Q +P GE P
Sbjct: 1342 GFPGDPGPPG----------------EPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGP 1385
Query: 129 LGPPGDKPPAWPARKQSLWGLSESSGQLG 157
GPPG + P PA + G + G+ G
Sbjct: 1386 SGPPGKRGPPGPAGPEGRQGEKGAKGEAG 1414
Score = 33.1 bits (74), Expect = 0.22
Identities = 28/107 (26%), Positives = 36/107 (33%), Gaps = 18/107 (16%)
Query: 51 PGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLG 110
PGPL P VP P +G++ P P A GG G
Sbjct: 855 PGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGF-------------PGFPGANGEKGGRG 901
Query: 111 SPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLG 157
+P +P G+ P GP G++ P K G S G G
Sbjct: 902 TPGKPGPR-----GQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAG 943
Score = 30.0 bits (66), Expect = 1.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 97 PALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWG 148
P A + G +G P RP P G A G PG+K P PA + L G
Sbjct: 1089 PGERGPAGAAGPIGIPGRPGPQGPP--GPAGEKGAPGEKGPQGPAGRDGLQG 1138
Score = 27.7 bits (60), Expect = 9.4
Identities = 34/119 (28%), Positives = 39/119 (32%), Gaps = 22/119 (18%)
Query: 47 NSSAPGPLSTPN----TAPHTPV--PPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALP 100
NS GP P P P P P P P G + H Q R E
Sbjct: 935 NSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDG----LPGHPGQ---RGETGFQ 987
Query: 101 SAAESPG--GLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLG 157
PG G+ P P GE P+G G P P +Q L GL+ G G
Sbjct: 988 GKTGPPGPPGVVGPQGPT-------GETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKG 1039
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 36.6 bits (83), Expect = 0.020
Identities = 41/142 (28%), Positives = 55/142 (38%), Gaps = 18/142 (12%)
Query: 11 PSSLPCVGIAAVAEPPP------PFQNRRS---IPSARPSRQLRRNSSAPGPLSTPNTAP 61
P++L + A PPP PF S PSA P Q + +AP PL P + P
Sbjct: 428 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP-PLQVPPSPP 486
Query: 62 HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQ---H 118
+P P P P A + + LQ L + P P A +P P P
Sbjct: 487 ASPPMSPSATPPPQAPPP----LAAPPLQ-LAKPPPQAPPALATPPLQALPSPPASFPGQ 541
Query: 119 NPLSWGEAVPLGPPGDKPPAWP 140
P S ++P+ P PP P
Sbjct: 542 APFSPSASLPMSPLATPPPQAP 563
Score = 30.4 bits (67), Expect = 1.5
Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%)
Query: 7 VSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN-------- 58
+S+ P + P A ++ PP ++P+ S L + P PL+ P+
Sbjct: 299 LSSSPLATPSPSAALQSQAPP------TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQ 352
Query: 59 TAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQH 118
T P P PP + G+ + +H P ++P L P
Sbjct: 353 TLPSPPATPPSQAT---TSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 409
Query: 119 NPLSWGEAVPLGPPGDKPP 137
+P + PL P + P
Sbjct: 410 SPPASPPLSPLATPSPQAP 428
Score = 28.1 bits (61), Expect = 7.2
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 8 STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPP 67
+T P S P G A R S R R +++PGP+S+P A T P
Sbjct: 68 ATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPG 127
Query: 68 P 68
P
Sbjct: 128 P 128
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,088,445
Number of Sequences: 37866
Number of extensions: 867788
Number of successful extensions: 6806
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 557
Number of HSP's that attempted gapping in prelim test: 5326
Number of HSP's gapped (non-prelim): 1826
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.