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Search of human proteins with 239754081
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
(355 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 744 0.0
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 744 0.0
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 744 0.0
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 64 2e-10
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 62 1e-09
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 60 2e-09
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 59 9e-09
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 59 9e-09
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 3e-08
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 56 4e-08
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 55 1e-07
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 54 3e-07
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 54 3e-07
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 54 3e-07
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 53 5e-07
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 52 6e-07
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 52 6e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 8e-07
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 52 8e-07
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 52 8e-07
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 1e-06
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 51 1e-06
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 50 3e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 50 3e-06
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 50 4e-06
gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform... 49 5e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 49 5e-06
gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I... 49 5e-06
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 744 bits (1922), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK 60
MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK
Sbjct: 1 MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK 60
Query: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS 120
ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS
Sbjct: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS 120
Query: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG
Sbjct: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
Query: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV
Sbjct: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
Query: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
Query: 301 HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV
Sbjct: 301 HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 744 bits (1922), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK 60
MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK
Sbjct: 1 MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK 60
Query: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS 120
ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS
Sbjct: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS 120
Query: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG
Sbjct: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
Query: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV
Sbjct: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
Query: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
Query: 301 HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV
Sbjct: 301 HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 744 bits (1922), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK 60
MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK
Sbjct: 1 MSHTCCQVTLPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK 60
Query: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS 120
ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS
Sbjct: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGS 120
Query: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG
Sbjct: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
Query: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV
Sbjct: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
Query: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS
Sbjct: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
Query: 301 HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV
Sbjct: 301 HNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 63.9 bits (154), Expect = 2e-10
Identities = 91/289 (31%), Positives = 104/289 (35%), Gaps = 42/289 (14%)
Query: 73 RGPSPAHPWTTPQPGPPHQPG----FNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGA 128
R P+P P PQP PG A +P LPA P T A G + AGA
Sbjct: 12 RTPAPGCPEVAPQPEGTDAPGPAVCSPTARAPPPILPAPQRPP--TRAREWEGAAWAAGA 69
Query: 129 GNSRAGGGLTKYNSAHSSSRVP---RPRLPSQRRGA-----SCGLGPGPESRAARQGLGG 180
+ G L + RVP R P GA SCG PGP R A G
Sbjct: 70 --TGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK 127
Query: 181 RSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV 240
R A A R P R R A LP + G G + P RH R
Sbjct: 128 RPA-AAARAAPPRQR-----------SLARCLPRSVGSCVRPSVGPSL--PRRHCR-RHC 172
Query: 241 AAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
R L PP + RL S PL A P+LSP RRCR +S PA
Sbjct: 173 RCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRA-PSLSPFP-RRCRRRAERS--PAG 228
Query: 301 H------NAQRAARHIPSRPRASGLRARA-ARRPGLDPGPAPYPLTPAA 342
H + R + +R R G R RR G G P P PAA
Sbjct: 229 HGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAA 277
Score = 38.1 bits (87), Expect = 0.012
Identities = 60/248 (24%), Positives = 78/248 (31%), Gaps = 52/248 (20%)
Query: 84 PQPGPPHQPGFNPASSPRLPLP-ADSEPDAYTSAPR-----------GSG---PTYCAGA 128
P+P PP QP AS PRL P A S + + PR G G P +
Sbjct: 182 PKP-PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRG 240
Query: 129 GN-----SRAGGGLTKYNSAHSSSRVPRPRLPS---------QRRGA----SCGLGPGPE 170
G R GG + + P +P+ +RR A G GPG
Sbjct: 241 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVS 300
Query: 171 SRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARG 230
R QG G R RG RP P GA G +A + A
Sbjct: 301 PREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIF--AAGPRLSAPSAEAEEV 358
Query: 231 PARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL----------------ARPPLRFP 274
P H ++R GR SP +S +R P +
Sbjct: 359 PGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSVNSHPSRSPYNWS 418
Query: 275 PARPALSP 282
P P++ P
Sbjct: 419 PPSPSVPP 426
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 61.6 bits (148), Expect = 1e-09
Identities = 95/345 (27%), Positives = 132/345 (38%), Gaps = 44/345 (12%)
Query: 19 SPLHPTPS-EALSCWPSPPGEAYSLPELPFKKSKPFL--PQSKQKADTETIGSSGGSRGP 75
S P+PS E S P PP L E +P P S++ + + S R P
Sbjct: 346 SATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSP 405
Query: 76 SPAHPWTTPQPGPPHQPGFNPASSPRLPLP------ADSEPDAYTSAPR-GSGPTYCAGA 128
P P PQ + SSP P P A S P++ AP GS +
Sbjct: 406 -PKSPEKLPQSS-------SSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSP 457
Query: 129 GNSRAGGGLTKYNSAHS---SSRVPRPRLPSQ-RRGASCGLGPGPESRAARQGLGGRSAR 184
+ G K + +HS S R+ R R P+ +RG S P + + R +R
Sbjct: 458 TSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSR 517
Query: 185 ARTRRGPHRTRRPEPGPHHTGARQAGPLPG--------TRGRTRAAGTG-SAARGPARHL 235
+ R G R+ P G ++ PG RGR+R+A G S +R PA
Sbjct: 518 SAQRWGRSRS------PQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRG 571
Query: 236 RGGSVAAAAAARCLGLSPP---GRSRLFSPRSSLARPPLRFPPARPALSPSARR---RCR 289
R S A R +P RSR + R S +R P R +R + +P+ RR R
Sbjct: 572 RSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSR-SRTPARRRSRTRSP 630
Query: 290 VNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPA 334
V SR + + R+ P+R S R A R PA
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPA 675
Score = 55.8 bits (133), Expect = 6e-08
Identities = 78/327 (23%), Positives = 117/327 (35%), Gaps = 36/327 (11%)
Query: 30 SCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPP 89
S P E+ S P+ K P +S+ + E S S P + ++P+
Sbjct: 1550 SASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLS--PRRSRSGSSPEVKD- 1606
Query: 90 HQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRV 149
P ++PR +DS P+ APR P +S+ G + +S+ SS
Sbjct: 1607 -----KPRAAPRAQSGSDSSPEPKAPAPRAL-PRRSRSGSSSKGRGPSPEGSSSTESSPE 1660
Query: 150 PRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQA 209
P+ + RRG+ P +SR + RS+ TR+ R +R A
Sbjct: 1661 HPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRR----------SRSA 1710
Query: 210 GPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARP 269
P TR RT P RH R SV++ A S R SPR+
Sbjct: 1711 SSSPETRSRT-----------PPRHRRSPSVSSPEPAE-KSRSSRRRRSASSPRTKTTSR 1758
Query: 270 PLRFPPARP-----ALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAA 324
R P +P + S S R + R + +S + R + SR R + R +
Sbjct: 1759 RGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGS 1818
Query: 325 RRPGLDPGPAPYPLTPAALRPGTSPHP 351
P T + R G S P
Sbjct: 1819 GYHSRSPARQESSRTSSRRRRGRSRTP 1845
Score = 52.0 bits (123), Expect = 8e-07
Identities = 73/287 (25%), Positives = 108/287 (37%), Gaps = 22/287 (7%)
Query: 51 KPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEP 110
+P P + GSS RGPSP +T + P H P A P EP
Sbjct: 1623 EPKAPAPRALPRRSRSGSSSKGRGPSPEGSSST-ESSPEHPPKSRTARRGSRSSP---EP 1678
Query: 111 DAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGP- 169
+ P + + +A L++ + + SSS R R P + R + P P
Sbjct: 1679 KTKSRTPPRRRSSRSSPELTRKAR--LSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPA 1736
Query: 170 -ESRAARQGLGGRSARARTRRGPHRTRRPEPGPHH-TGARQAGPLPGTRGRTRAAGTGSA 227
+SR++R+ S R +T R R P P P +R TR R +GS+
Sbjct: 1737 EKSRSSRRRRSASSPRTKTTS--RRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSS 1794
Query: 228 ARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRR 287
R R S + R G RS R +R R R P++R+R
Sbjct: 1795 QSTSRRRQRSRSRSRVTRRRRGGSGYHSRS---PARQESSRTSSRRRRGRSRTPPTSRKR 1851
Query: 288 CR-----VNWNQS---SRPASHNAQRAARHIPSRPRASGLRARAARR 326
R W +S + PA+H R+ + SR R+ + +RR
Sbjct: 1852 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRR 1898
Score = 45.1 bits (105), Expect = 1e-04
Identities = 96/371 (25%), Positives = 140/371 (37%), Gaps = 61/371 (16%)
Query: 13 ASCTLTSPLHPTPSEALS----CWPSPPGEAYSLPELPFKKSKPFLPQ-SKQKADTETIG 67
+S T +SP HP S P P ++ + P +S P L + ++ + +
Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 1711
Query: 68 SSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPT-YCA 126
SS +R +P +P P +P SS R + S P T++ RG P+
Sbjct: 1712 SSPETRSRTPPRHRRSPSVSSP-EPAEKSRSSRRRR--SASSPRTKTTSRRGRSPSPKPR 1768
Query: 127 GAGNSRAGGGLTKYN---------SAHSSSRV-----PRPRLPSQRRGASCGLGPGP--- 169
G SR+ K S+ S+SR R R+ +RRG S P
Sbjct: 1769 GLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQ 1828
Query: 170 -ESRAARQGLGGRS---------ARARTRRGPHRTRRPEPGPH-HTGARQAGPLPGTR-G 217
SR + + GRS +R+RT P + R P H +R PL R
Sbjct: 1829 ESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRS 1888
Query: 218 RTRAAGTG---SAARGPARHLRGGSVAAAAAAR-CLGLSPP---GRSRLFSP----RSSL 266
R+R + S +R R S A+ + R +PP RSR +P RS
Sbjct: 1889 RSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRS 1948
Query: 267 ARPPL-------RFPP-----ARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRP 314
PP+ R PP +R SP RRR R + +R S + SR
Sbjct: 1949 RTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRS 2008
Query: 315 RASGLRARAAR 325
R S + R +R
Sbjct: 2009 RTSPVTRRRSR 2019
Score = 44.7 bits (104), Expect = 1e-04
Identities = 62/240 (25%), Positives = 84/240 (35%), Gaps = 31/240 (12%)
Query: 138 TKYNSAHSSSRVP-----RPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPH 192
T S SR P R R P +RR S P S +R R R+R+R
Sbjct: 608 TPARRGRSRSRTPARRRSRTRSPVRRRSRS--RSPARRSGRSRSRTPARRGRSRSRTPAR 665
Query: 193 RTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHL--RGGSVAAAAAARCLG 250
R R P R P RGR+R+ T R +R L RG S + R G
Sbjct: 666 RGRSRSRTPARRSGRSRSRTPARRGRSRSR-TPRRGRSRSRSLVRRGRSHSRTPQRR--G 722
Query: 251 LSPPGRSRLFSPRSSLARPPLRFPP-----------ARPALSPSARRRCRVNWNQS---- 295
S R R+S R P +R SP ++ + R++ +S
Sbjct: 723 RSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGS 782
Query: 296 ---SRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPA-ALRPGTSPHP 351
+ S R +R S+P+A R P P TP+ +SPHP
Sbjct: 783 SPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHP 842
Score = 44.3 bits (103), Expect = 2e-04
Identities = 77/363 (21%), Positives = 126/363 (34%), Gaps = 44/363 (12%)
Query: 2 SHTCCQVTLPAASCTLTSPLHPTPS-EALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQK 60
S T ++ + LTSP P + E +S SPP L + ++ P P S+ +
Sbjct: 2365 SLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPP-----LLDRARSRTPPSAP-SQSR 2418
Query: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYT-SAPRG 119
+E S G +P+ P P P + S L A + P A + S G
Sbjct: 2419 MTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSG 2478
Query: 120 SGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLG 179
+ T + AG+ + HS P +Q+ A L P E R++
Sbjct: 2479 AVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSS 2538
Query: 180 GRSARARTRRGPHRT------------------------RRPEPGPHHTGARQAG----P 211
S+ + + + R P P P A + G P
Sbjct: 2539 SSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEP 2598
Query: 212 LPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPL 271
P R R ++ + S++ + S ++++++ S S SP + P
Sbjct: 2599 TPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQA 2658
Query: 272 RFPPARPALSPSARRRCR-----VNWNQSSRPASHNAQRAARHIPS---RPRASGLRARA 323
PA P P RR R ++ + SR S++ R P R + S R
Sbjct: 2659 LPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERG 2718
Query: 324 ARR 326
+RR
Sbjct: 2719 SRR 2721
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/295 (21%), Positives = 98/295 (33%), Gaps = 31/295 (10%)
Query: 61 ADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSE----------- 109
A T T +G R PSPA P +PG P P A +
Sbjct: 284 AKTHTTALAG--RSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKD 341
Query: 110 ------------PDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQ 157
P+ ++ P PT + + L + P P++
Sbjct: 342 KKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTR 401
Query: 158 RRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRG 217
R P+S ++ +R P+P P R+ P ++
Sbjct: 402 DRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKN 461
Query: 218 RT--RAAGTGSAARGPARHL-RGGSVAAAAAARCLGLSPP--GRSRLFSPRSSLARPPLR 272
R+ RA S + P+R + R S A A R +P G SR SP+ +R R
Sbjct: 462 RSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQR 521
Query: 273 FPPAR-PALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARR 326
+ +R P +R R W++S R+AR S R+ R R+ R
Sbjct: 522 WGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSR 576
Score = 38.5 bits (88), Expect = 0.009
Identities = 64/285 (22%), Positives = 103/285 (36%), Gaps = 33/285 (11%)
Query: 98 SSPRLPLPADSEPDAYTSAP-----RGSGPTYCAGAG---NSRAGGGLTKYNSAHSSSRV 149
+SPR+PL A TS P R P + RA ++ A S S +
Sbjct: 2381 TSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLL 2440
Query: 150 P------RPRLPSQRRGASCGLGPGPESRAARQGLG-GRSARARTRRGPHRTRR--PEPG 200
P R +PS S L A Q L G A + G H P PG
Sbjct: 2441 PPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPG 2500
Query: 201 PHH---------TGARQAGPLPGTR-GRTRAAGTGSAARGPARHLRGGSVAAAAAARCLG 250
H TGA+Q L + + R + + S++ + S ++++++
Sbjct: 2501 VPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSS 2560
Query: 251 LSPPGRSRLFSPRSSLARPPLRFPPARPAL------SPSARRRCRVNWNQSSRPASHNAQ 304
G S P +L R P P + A+ P+ +R R + + SS +S ++
Sbjct: 2561 SDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSS 2620
Query: 305 RAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSP 349
++ S +S + ++ P+P P AL SP
Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASP 2665
Score = 37.7 bits (86), Expect = 0.016
Identities = 70/311 (22%), Positives = 106/311 (34%), Gaps = 41/311 (13%)
Query: 71 GSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGN 130
G+R P+ + G P P+SS PA A PR + T
Sbjct: 2299 GARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPAS----ANLVGPRSAHATAPVNIAG 2354
Query: 131 SRAGGGLT-------KYNSAHSSSRVPRPRLPSQRRGASCGLGPGP---ESRAARQGLGG 180
SR L + A S + + PR+P G P +R+
Sbjct: 2355 SRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAP 2414
Query: 181 RSARARTRRGPHRTRRPEPGPHHTGARQA-----GPLPGT---RGRTRAAGTGSAARGPA 232
+R + R P + R P + A P+P + R A T A +
Sbjct: 2415 SQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAG--S 2472
Query: 233 RHLRGGSVAAAAAAR-----CLGLSPPGRSRLFSPRSSLARPPL----RFPPARPALSPS 283
+ L G+VA ++ L + PG P S + PP + P A AL P+
Sbjct: 2473 QSLSSGAVATTTSSAGDHNGMLSVPAPG-----VPHSDVGEPPASTGAQQPSALAALQPA 2527
Query: 284 ARRRCRVNWNQSSRPASHNAQRAARHIPSRPRAS---GLRARAARRPGLDPGPAPYPLTP 340
RR + + SS +S ++ ++ S +S G L P+P P
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPK 2587
Query: 341 AALRPGTSPHP 351
A+R G P P
Sbjct: 2588 EAVREGRPPEP 2598
Score = 34.7 bits (78), Expect = 0.13
Identities = 77/330 (23%), Positives = 113/330 (34%), Gaps = 42/330 (12%)
Query: 55 PQSKQKADTETIGSSGGSRGPSPAHPW----TTPQPGPPHQPGFNPA----SSPRLPLPA 106
P ++ + T + G SR P + T+P P + +PA S R PL +
Sbjct: 1825 PARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLIS 1884
Query: 107 DSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP-------RPRLPSQRR 159
+ TS R+ + + S SR P R R P+ RR
Sbjct: 1885 RRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRR 1944
Query: 160 GASCGLGPGPE--------------SRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTG 205
+ P SR+ + R +R+RT R R P
Sbjct: 1945 RSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRR 2004
Query: 206 ARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSS 265
++ P TR R+R+ T A R +R R + + L+ RSR +PR++
Sbjct: 2005 RSRSRTSPVTRRRSRSR-TPPAIRRRSRS-RTPLLPRKRSRSRSPLAIRRRSRSRTPRTA 2062
Query: 266 LARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGL---RAR 322
+ L SP A RR + + S R S H SR L R
Sbjct: 2063 RGKRSL-------TRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMS 2115
Query: 323 AARRPGLDPGPAPYPLTPAALRP-GTSPHP 351
RP + P P +P L P G+S P
Sbjct: 2116 CFSRPSMSPTPLDRCRSPGMLEPLGSSRTP 2145
Score = 33.9 bits (76), Expect = 0.23
Identities = 47/216 (21%), Positives = 70/216 (32%), Gaps = 31/216 (14%)
Query: 126 AGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARA 185
+G+ +A S SSS P+ + + R + P P+ ++ G R
Sbjct: 799 SGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKS------GTPPRQ 852
Query: 186 RTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAA 245
+ P + P ++ P P + RT P+RH
Sbjct: 853 GSITSPQANEQSVT-PQRRSCFESSPDPELKSRT-----------PSRH----------- 889
Query: 246 ARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQR 305
C G SPP PR S +R P + +SP R + SR S R
Sbjct: 890 -SCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPR 948
Query: 306 AARHI-PSRPRASGLRARAARRPGLDPGPAPYPLTP 340
+R + P S L R + P P TP
Sbjct: 949 RSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETP 984
Score = 32.7 bits (73), Expect = 0.51
Identities = 71/308 (23%), Positives = 106/308 (34%), Gaps = 56/308 (18%)
Query: 38 EAYSLPELPFKKSKP-FLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNP 96
EA +P + P F P+ K+ +++ +S GS P + G GF+
Sbjct: 1294 EAVEVPSMASSWGGPHFSPEHKELSNSPLRENSFGS----PLEFRNSGPLGTEMNTGFSS 1349
Query: 97 ASSPRL------PLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP 150
L L D D + R SG + + ++ G++ S S
Sbjct: 1350 EVKEDLNGPFLNQLETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDA 1409
Query: 151 RPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAG 210
PR PS+ R +S S + GL R P R R +G
Sbjct: 1410 VPRTPSRERSSSA------SSPEMKDGL---------PRTPSRRSR------------SG 1442
Query: 211 PLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPP-GRSRLFSPRSSLARP 269
PG R G+G+ P+RH GS + + + +P GRS S A P
Sbjct: 1443 SSPGLRD-----GSGT----PSRHSLSGS---SPGMKDIPRTPSRGRSECDSSPEPKALP 1490
Query: 270 PLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGL 329
P +R SP +C + S S Q+ P G R+R+ L
Sbjct: 1491 QTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTP-----LGQRSRSGSSQEL 1545
Query: 330 DPGPAPYP 337
D P+ P
Sbjct: 1546 DVKPSASP 1553
Score = 30.8 bits (68), Expect = 1.9
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPP----GEAYSLPELPFKKSKPF---LPQSKQKADT 63
P A SP P P E S P P ++ SL P ++ +P P+ +Q + +
Sbjct: 2656 PQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSS 2715
Query: 64 ET---IGSSGGSRGPSPAHPWTTPQPGP 88
E G G SR PS TP P P
Sbjct: 2716 ERGSRRGQRGDSRSPSHKRRRETPSPRP 2743
Score = 30.0 bits (66), Expect = 3.3
Identities = 45/198 (22%), Positives = 67/198 (33%), Gaps = 37/198 (18%)
Query: 19 SPLHPTPSEALSCWPSP---PGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGP 75
S L P AL PSP P EA P +P + K+++ + + SS S
Sbjct: 2566 SSLPVQPEVALKRVPSPTPAPKEAVREGRPP----EPTPAKRKRRSSSSSSSSSSSSSSS 2621
Query: 76 SPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGG 135
S + ++ + +SS P PA P A P+ + P
Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQAL---PKPASPK------------ 2666
Query: 136 GLTKYNSAHSSSRVPRPRL------------PSQRRGASCGLGPGPESRAARQGLGGRSA 183
K SR PR + P +RR S P + ++ + R
Sbjct: 2667 ---KPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQ 2723
Query: 184 RARTRRGPHRTRRPEPGP 201
R +R H+ RR P P
Sbjct: 2724 RGDSRSPSHKRRRETPSP 2741
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 60.5 bits (145), Expect = 2e-09
Identities = 89/327 (27%), Positives = 119/327 (36%), Gaps = 77/327 (23%)
Query: 56 QSKQKADTETIG------SSGGSRGPSPAHPWTTPQP----GPPHQP-----GFNPASSP 100
+ K++ TE+ G SSG S PS + ++ + P H+ G +S
Sbjct: 238 KEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGS 297
Query: 101 RLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRG 160
R P P+ + S R G +GA R G SAHS P P R
Sbjct: 298 RSPSPSGGS--GWGSPQRNGGSGQRSGAHGGRPG-------SAHSPPDKPSSPSPRVRDK 348
Query: 161 ASCGL---------GPGPESRAARQGLGGRSA-----RARTRRGPHRTRRPEPGPHHTGA 206
A+ P P S + QG GGR+A R R RR R+R P G
Sbjct: 349 AAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGR 408
Query: 207 RQAGPLPGTRGRTRA---------AGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRS 257
R+ P P RG +R+ +G+G A GP PG
Sbjct: 409 RRPRPAP-PRGSSRSLSRARSSSDSGSGRGAPGPG-------------------PEPGSE 448
Query: 258 RLFSPRSSLA--RPPLRFPPARPALSPSAR-RRCRVNWNQSSR-PASHNAQRAARHIPSR 313
R A RPP R PA + SP A RR SSR P H ++ PS+
Sbjct: 449 RGHGGHGKRAKERPP-RARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSK 507
Query: 314 PRASGLRARAARRPGLDPGPAPYPLTP 340
R+R+A + P +P P P
Sbjct: 508 S-----RSRSAEKRPHSPSRSPSPKKP 529
Score = 32.7 bits (73), Expect = 0.51
Identities = 62/236 (26%), Positives = 85/236 (36%), Gaps = 62/236 (26%)
Query: 46 PFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLP-- 103
P + S L +++ +D+ GS G+ GP P +PG G + + P
Sbjct: 415 PPRGSSRSLSRARSSSDS---GSGRGAPGPGP-------EPGSERGHGGHGKRAKERPPR 464
Query: 104 -LPADSEPDAYTSAPRGSGPTYCAGAGNSRAGG------------GLTKYNSA----HSS 146
PA + P RG GP G +SR+ G ++ SA HS
Sbjct: 465 ARPASTSPSPGAHGRRG-GPE---GKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSP 520
Query: 147 SRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRS---ARARTRRGPH----------R 193
SR P P+ P R G E+ A R RS R R R P R
Sbjct: 521 SRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSAR 580
Query: 194 TR-----RPEP--------GPHHTGARQAGPLPG-TRG--RTRAAGTGSAARGPAR 233
R RP P + T + P PG + G +R+ GT S R P+R
Sbjct: 581 KRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPGHSHGSYSSRSHGTRSRTRSPSR 636
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 58.5 bits (140), Expect = 9e-09
Identities = 87/309 (28%), Positives = 107/309 (34%), Gaps = 46/309 (14%)
Query: 46 PFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLP 105
PF P + + K G+ G G + P P P SPR P
Sbjct: 97 PFLSLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREP-- 154
Query: 106 ADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGL 165
P SAP GP + ++ + + S RVPR + Q
Sbjct: 155 ---TPPGRLSAPPRHGP-------HPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSH 204
Query: 166 GPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTG 225
PE A + ARA P P P AG G G R A G
Sbjct: 205 FLAPEGSVASLLPSAKPARA-----------PRPAPRAREEAAAGS-RGRGGAERPAARG 252
Query: 226 SAARGP-ARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPP----ARPAL 280
SA + P AR L +V+ AA+ L SPP PR A PP P P+L
Sbjct: 253 SAQQPPLARLLLASAVSLAAS---LARSPPP----LQPRLGSASPPRLAAPLAGSRAPSL 305
Query: 281 SPSARRRCRVNWNQSSRPASH------NAQRAARHIPSRPRASGLRARA-ARRPGLDPGP 333
SP RRCR +S PA H + R + +R R G R RR G G
Sbjct: 306 SPFP-RRCRRRAERS--PAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGS 362
Query: 334 APYPLTPAA 342
P P PAA
Sbjct: 363 PPIPAGPAA 371
Score = 39.3 bits (90), Expect = 0.005
Identities = 65/226 (28%), Positives = 76/226 (33%), Gaps = 44/226 (19%)
Query: 155 PSQRRGASCGLGPGPESRAARQGLGGRSARAR------------TRRGPHRTRRPEPGPH 202
P Q RG S P P R+G G+ R RR H R P P
Sbjct: 103 PHQERGRS---KPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGR 159
Query: 203 HTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSP 262
+ + GP P + R A G RG R RG A R S +P
Sbjct: 160 LSAPPRHGPHPQSFRRPSAHPPG---RGSGRVPRGQPEQQAWEQRS--------SHFLAP 208
Query: 263 RSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRP-------- 314
S+A P A+PA +P R R SR + AAR +P
Sbjct: 209 EGSVAS---LLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLA 265
Query: 315 RASGLRARAARR-PGLDP--GPAPYPLTPAAL----RPGTSPHPGR 353
A L A AR P L P G A P A L P SP P R
Sbjct: 266 SAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRR 311
Score = 37.4 bits (85), Expect = 0.021
Identities = 73/320 (22%), Positives = 100/320 (31%), Gaps = 77/320 (24%)
Query: 34 SPPGEAYSL--PELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPG---- 87
+P G SL P + +P P+++++A + G G R PA + QP
Sbjct: 207 APEGSVASLLPSAKPARAPRP-APRAREEAAAGSRGRGGAER---PAARGSAQQPPLARL 262
Query: 88 ----------------PPHQPGFNPASSPRLPLP-ADSEPDAYTSAPR-----------G 119
PP QP AS PRL P A S + + PR G
Sbjct: 263 LLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAG 322
Query: 120 SG---PTYCAGAGN-----SRAGGGLTKYNSAHSSSRVPRPRLPS---------QRRGA- 161
G P + G R GG + + P +P+ +RR A
Sbjct: 323 HGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAAR 382
Query: 162 ---SCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGR 218
G GPG R QG G R RG RP P GA G
Sbjct: 383 QWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIF--AAGP 440
Query: 219 TRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL------------ 266
+A + A P H ++R GR SP +S
Sbjct: 441 RLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSV 500
Query: 267 ----ARPPLRFPPARPALSP 282
+R P + P P++ P
Sbjct: 501 NSHPSRSPYNWSPPSPSVPP 520
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 58.5 bits (140), Expect = 9e-09
Identities = 87/309 (28%), Positives = 107/309 (34%), Gaps = 46/309 (14%)
Query: 46 PFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLP 105
PF P + + K G+ G G + P P P SPR P
Sbjct: 97 PFLSLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREP-- 154
Query: 106 ADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGL 165
P SAP GP + ++ + + S RVPR + Q
Sbjct: 155 ---TPPGRLSAPPRHGP-------HPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSH 204
Query: 166 GPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTG 225
PE A + ARA P P P AG G G R A G
Sbjct: 205 FLAPEGSVASLLPSAKPARA-----------PRPAPRAREEAAAGS-RGRGGAERPAARG 252
Query: 226 SAARGP-ARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPP----ARPAL 280
SA + P AR L +V+ AA+ L SPP PR A PP P P+L
Sbjct: 253 SAQQPPLARLLLASAVSLAAS---LARSPPP----LQPRLGSASPPRLAAPLAGSRAPSL 305
Query: 281 SPSARRRCRVNWNQSSRPASH------NAQRAARHIPSRPRASGLRARA-ARRPGLDPGP 333
SP RRCR +S PA H + R + +R R G R RR G G
Sbjct: 306 SPFP-RRCRRRAERS--PAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGS 362
Query: 334 APYPLTPAA 342
P P PAA
Sbjct: 363 PPIPAGPAA 371
Score = 39.3 bits (90), Expect = 0.005
Identities = 65/226 (28%), Positives = 76/226 (33%), Gaps = 44/226 (19%)
Query: 155 PSQRRGASCGLGPGPESRAARQGLGGRSARAR------------TRRGPHRTRRPEPGPH 202
P Q RG S P P R+G G+ R RR H R P P
Sbjct: 103 PHQERGRS---KPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGR 159
Query: 203 HTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSP 262
+ + GP P + R A G RG R RG A R S +P
Sbjct: 160 LSAPPRHGPHPQSFRRPSAHPPG---RGSGRVPRGQPEQQAWEQRS--------SHFLAP 208
Query: 263 RSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRP-------- 314
S+A P A+PA +P R R SR + AAR +P
Sbjct: 209 EGSVAS---LLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLA 265
Query: 315 RASGLRARAARR-PGLDP--GPAPYPLTPAAL----RPGTSPHPGR 353
A L A AR P L P G A P A L P SP P R
Sbjct: 266 SAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRR 311
Score = 37.4 bits (85), Expect = 0.021
Identities = 73/320 (22%), Positives = 100/320 (31%), Gaps = 77/320 (24%)
Query: 34 SPPGEAYSL--PELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPG---- 87
+P G SL P + +P P+++++A + G G R PA + QP
Sbjct: 207 APEGSVASLLPSAKPARAPRP-APRAREEAAAGSRGRGGAER---PAARGSAQQPPLARL 262
Query: 88 ----------------PPHQPGFNPASSPRLPLP-ADSEPDAYTSAPR-----------G 119
PP QP AS PRL P A S + + PR G
Sbjct: 263 LLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAG 322
Query: 120 SG---PTYCAGAGN-----SRAGGGLTKYNSAHSSSRVPRPRLPS---------QRRGA- 161
G P + G R GG + + P +P+ +RR A
Sbjct: 323 HGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAAR 382
Query: 162 ---SCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGR 218
G GPG R QG G R RG RP P GA G
Sbjct: 383 QWRKRGGGPGVSPREGAQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIF--AAGP 440
Query: 219 TRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL------------ 266
+A + A P H ++R GR SP +S
Sbjct: 441 RLSAPSAEAEEVPGGHTASNPTYEPLSSRRTKAPSEGRDSPSSPATSTHYLDRESGLGSV 500
Query: 267 ----ARPPLRFPPARPALSP 282
+R P + P P++ P
Sbjct: 501 NSHPSRSPYNWSPPSPSVPP 520
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 56.6 bits (135), Expect = 3e-08
Identities = 95/353 (26%), Positives = 119/353 (33%), Gaps = 55/353 (15%)
Query: 23 PTPSEALSCWPS----PPGEAY--SLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPS 76
PTPS P PP E S+ LPF K P P KQ S S
Sbjct: 865 PTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSS-------S 917
Query: 77 PAHPWTTPQP-GPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGG 135
P TP P G P P A +P P + T +P+ + PT A S GG
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWA-PTPPAATPPSPKGG 976
Query: 136 GLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTR 195
T S + P PS + G + P P+ + S + P
Sbjct: 977 PATP--SPKGAPTPPAATPPSPKGGPAT---PSPKGAPTPPAVTPPSPKGSPAATPFPKG 1031
Query: 196 RPEP----GPHHTGARQAGPLPGTRGRTRAAGTGSAARGPAR-HLRGGSVAAAAAARC-- 248
P P G+ A PLP T AA S GPA L+G AA
Sbjct: 1032 ASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPK 1091
Query: 249 --------LGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPAS 300
G P + SP+ LA PP + P PA +P + P
Sbjct: 1092 GGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPS-------------PKG 1138
Query: 301 HNAQRAARHIPSRPRASGLRARAARRPGL-DPGPAPYPLTPAALRPGTSPHPG 352
A + P+ P A+ + + GL P P P TPAA P SP G
Sbjct: 1139 GLATPPPKGAPTTPAAT----PPSPKGGLATPPPKGAPTTPAATPP--SPKGG 1185
Score = 47.0 bits (110), Expect = 3e-05
Identities = 79/357 (22%), Positives = 119/357 (33%), Gaps = 59/357 (16%)
Query: 9 TLPAASCTLTSPLHP-TPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIG 67
T P+ L +P H P+ A+ PSP G + P K P P +
Sbjct: 1270 TPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPP----KGAPTPPAATP-------- 1317
Query: 68 SSGGSRGPSP-AHPWTTPQPGPPHQPGFNPAS---SPRLPLPADSEPDAYTSAPRGSGPT 123
PSP P T P G P P P S +P LP S T+ GPT
Sbjct: 1318 -------PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPT 1370
Query: 124 YCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSA 183
A + + G +T PS +RG + G + A L + A
Sbjct: 1371 PPAATPSHKGGPAMTP---------------PSPKRGPAIPSPKGDPTSPAVIPLSPKKA 1415
Query: 184 RAR--TRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVA 241
A TR G + + P P +A T + GPA G
Sbjct: 1416 PATPVTREGAATPSKGDLTP---------PAVTPVSLKKAPATSAPKGGPATPSSKGDPT 1466
Query: 242 AAAAARCLGLSPPGRSRL---FSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRP 298
A PP ++ SP+ + A P P PA+ PS+ + + P
Sbjct: 1467 LPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDP 1526
Query: 299 ASHNAQRAARHIPS--RPRAS----GLRARAARRPGLDPGPAPYPLTPAALRPGTSP 349
+ A ++ P+ P+ + + + ++ P P P TP++ + P
Sbjct: 1527 IAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPP 1583
Score = 43.9 bits (102), Expect = 2e-04
Identities = 88/369 (23%), Positives = 129/369 (34%), Gaps = 42/369 (11%)
Query: 11 PAASCTLTS-PLHPTPSEALSCWPSPPGEAYSL------PELPFKKSKPFLPQSKQKADT 63
P TLT+ PL PT SE PSP L PE+P P LP + T
Sbjct: 689 PVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGT 748
Query: 64 ETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPR--LPLPADS-EPDAYTSAPRGS 120
+ + G S + A ++P+ P G + +S + L ADS P + +P+
Sbjct: 749 KKV--DGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTK 806
Query: 121 -GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLG 179
PT AG G L+ S +S +P L Q S P + +
Sbjct: 807 RPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPT 866
Query: 180 GRSARARTRRG----PHRTRR--------PEPGPHHTGARQAGPLPGTRGRTRAAGTGSA 227
+ + +G P T P+ GP +QA L T + A A
Sbjct: 867 PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPA 926
Query: 228 ARG-PARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARR 286
+G PA G+ AA +PP SP+ A P ++ P PA +P + +
Sbjct: 927 PKGIPASPSPKGAPTPPAA------TPP------SPKGGPATPSPKWAPTPPAATPPSPK 974
Query: 287 RCRVNWNQSSRP----ASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAA 342
+ P A+ + + PS A A P P P+P +
Sbjct: 975 GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAST 1034
Query: 343 LRPGTSPHP 351
T P P
Sbjct: 1035 PPAATPPSP 1043
Score = 37.4 bits (85), Expect = 0.021
Identities = 70/326 (21%), Positives = 104/326 (31%), Gaps = 59/326 (18%)
Query: 18 TSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSP 77
T P P+ + PSP G + P K P P + + GG PSP
Sbjct: 1142 TPPPKGAPTTPAATPPSPKGGLATPPP----KGAPTTPAATPPSP------KGGLATPSP 1191
Query: 78 AHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGL 137
TTP PP G SP+ A + P A +P+G T
Sbjct: 1192 KGAPTTPAATPPSPKGGLATPSPK---GAPTTPAATPPSPKGGLAT-------------- 1234
Query: 138 TKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRP 197
S + P PS + G + P P+ S + PH+ P
Sbjct: 1235 ---PSPKGAPTTPAATPPSPKGGPAT---PPPKGAPTPPAATPPSLKGGLATPPHK-GAP 1287
Query: 198 EPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRS 257
P + + GP + A T AA P+ G+ A ++PP
Sbjct: 1288 NPAVVTPPSPKGGP---ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPP--- 1341
Query: 258 RLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRAS 317
SP+ + P PA +PS++ + P+S PS
Sbjct: 1342 ---SPKGT---------PTLPATTPSSK-------GGPTTPSSKEGPTPPAATPSHKGGP 1382
Query: 318 GLRARAARRPGLDPGPAPYPLTPAAL 343
+ + +R P P P +PA +
Sbjct: 1383 AMTPPSPKRGPAIPSPKGDPTSPAVI 1408
Score = 35.4 bits (80), Expect = 0.078
Identities = 86/381 (22%), Positives = 133/381 (34%), Gaps = 61/381 (16%)
Query: 12 AASCTLTSPLHPT---PSEAL----SCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTE 64
A + TL S P P EAL PSP P +P K P P SK+ +
Sbjct: 1528 APTATLLSKKTPATLAPKEALIPPAMTVPSPK----KTPAIPTPKEAPATPSSKEASSPP 1583
Query: 65 TIGSSGGSRGPSPAH---PWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSG 121
+ S PSP P P P P +P P E T AP+G+
Sbjct: 1584 AVTPSTYKGAPSPKELLIPPAVTSPSPKEAP------TPPAVTPPSPEKGPATPAPKGTP 1637
Query: 122 PTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPR--LPSQRRGASCG---LGPGPESRAARQ 176
+ + + + + VP+ LP+++ + + P PES
Sbjct: 1638 TSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPI-- 1695
Query: 177 GLGGRSARARTRRGPHRTRR--------PEP-------GPHHTGARQAGPLPGTRGRTRA 221
A TR+GP + P+P GP T A A LP + ++
Sbjct: 1696 ------ITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVA-PAPLLPVQKDSSKT 1748
Query: 222 AGTGSAARGPARHL-----RGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARP----PLR 272
A A+ P L + + AAA + P S +P ++ P P+
Sbjct: 1749 AKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVP 1808
Query: 273 FPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG 332
P + PS+ + ++ PA + IP P + G+ ++ P
Sbjct: 1809 TLPPKQQFLPSSPGLVLESPSKPLAPADED--ELLPLIPPEPISGGVPFQSVLVNMPTPK 1866
Query: 333 PAPYPL-TPAALRPGTSPHPG 352
A P+ TP+A +P T + G
Sbjct: 1867 SAGIPVPTPSAKQPVTKNNKG 1887
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 56.2 bits (134), Expect = 4e-08
Identities = 74/277 (26%), Positives = 109/277 (39%), Gaps = 29/277 (10%)
Query: 20 PLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSR--GPSP 77
P +PSE+ S + S P ++ K S +D E ++ + G +
Sbjct: 299 PYKRSPSES-----SSESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASGVTT 353
Query: 78 AHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGL 137
P PQPG P PG N ++ R + S + TS+ R S + + SR GGG
Sbjct: 354 GKPPAPPQPGGP-APGRNASARRRSSSSSSSSSASRTSSSRSSSRS----SSRSRRGGGY 408
Query: 138 TKYNSAHSSSRV---PRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRT 194
+ + H+ SR R R S+R S G +R G R +R+ RRG +
Sbjct: 409 YR-SGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDG--HRYSRSPARRGGYGP 465
Query: 195 RRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPP 254
RR H+G R G R + + S + P+R + +R SP
Sbjct: 466 RRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRS------RSLTRSRSHSPSPS 519
Query: 255 -----GRSRLFSPRSSLARPPLRFPPARPALSPSARR 286
RSR SP S AR L P A PA+ ++
Sbjct: 520 QSRSRSRSRSQSPSPSPAREKLTRPAASPAVGEKLKK 556
Score = 51.2 bits (121), Expect = 1e-06
Identities = 75/284 (26%), Positives = 107/284 (37%), Gaps = 32/284 (11%)
Query: 80 PWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTK 139
P P P + S R P P E + ++ GS A A + A G T
Sbjct: 295 PTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASGVTTG 354
Query: 140 YNSAHSSSRVPRP-RLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPE 198
A P P R S RR +S SR + RS+ +R+RRG
Sbjct: 355 KPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSS-SRSRRG-------- 405
Query: 199 PGPHHTGARQAGPLPGTRGRTRAAG---TGSAARGPARHLRGGS----VAAAAAARCLGL 251
G ++ R A + R+R+ + S +RG RH GGS + + AR G
Sbjct: 406 -GGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRG-RRHSGGGSRDGHRYSRSPARRGGY 463
Query: 252 SPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIP 311
P RSR S + R+ L + R R +W+ S S + R+ H P
Sbjct: 464 GPRRRSR------SRSHSGDRYRRGGRGLRHHSSSRSRSSWSLSP-SRSRSLTRSRSHSP 516
Query: 312 SRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
S P S R+R+ + P+P P RP SP G ++
Sbjct: 517 S-PSQSRSRSRSRSQ-----SPSPSPAREKLTRPAASPAVGEKL 554
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 55.1 bits (131), Expect = 1e-07
Identities = 97/368 (26%), Positives = 131/368 (35%), Gaps = 58/368 (15%)
Query: 23 PTPSEALSCWPSPPGEAY--SLPELPFKKSK--PFLPQSKQKADTETIGSSGGSRGPSPA 78
P + LS SPP + S P P K++ P QS + + S G + G
Sbjct: 382 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTK 441
Query: 79 HPWTTPQPGPPHQPGFNPASSPRLPLPADSEPD------AYTSAP-----RGSGPTYCAG 127
H T + P +PA PR ++SE D A S R +
Sbjct: 442 HKGTEKRESP------SPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSD 495
Query: 128 AGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARART 187
+G+S + S + V R R S R AS P P R GR R R+
Sbjct: 496 SGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSAS----PSPRKRQKETSPRGR--RRRS 549
Query: 188 RRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAAR 247
P RR P P R+ P P R RT + + P R+ + R
Sbjct: 550 PSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRY-------SPPIQR 602
Query: 248 CLGLSPPGRSRLFSP------RSSLARPPLR----FPPARPALSPSARRR---CRVNWNQ 294
SPP + R SP R+S + PP R PP + SP +RR +
Sbjct: 603 RYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRK 662
Query: 295 SSRPA-----SHNAQRAARHIPS-RPRASGLRARAAR-RPGLDPGP----APYPLTPAAL 343
S P+ + + Q RH PS RPRA + R G P +P P T
Sbjct: 663 GSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIR 722
Query: 344 RPGTSPHP 351
R +P P
Sbjct: 723 RVSRTPEP 730
Score = 48.5 bits (114), Expect = 9e-06
Identities = 77/323 (23%), Positives = 111/323 (34%), Gaps = 69/323 (21%)
Query: 19 SPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPA 78
SP H T S + S P + LPE K +P + ++ +D +
Sbjct: 200 SPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKV------------ 247
Query: 79 HPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLT 138
P+P P +P P + P+ + + T S++
Sbjct: 248 -----PKPEP-------------IPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTR 289
Query: 139 KYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPE 198
+ +H+ PR R S+ R S P P R S R RT RR
Sbjct: 290 SRSPSHTR---PRRRHRSRSRSYSPRRRPSPRRRP--------SPRRRT-----PPRRMP 333
Query: 199 PGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSR 258
P P H +R R R R++ + S + + R S R SPP ++R
Sbjct: 334 PPPRHRRSRSP-----VRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRT--SSPPRKTR 386
Query: 259 LFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASG 318
SP S + P R P+ PA P R S P N R +R S R SG
Sbjct: 387 RLSP--SASPPRRRHRPSPPATPPPKTR-------HSPTPQQSNRTRKSRVSVSPGRTSG 437
Query: 319 LRARAARRPGLD----PGPAPYP 337
+ + G + P PAP P
Sbjct: 438 ---KVTKHKGTEKRESPSPAPKP 457
Score = 45.4 bits (106), Expect = 8e-05
Identities = 79/327 (24%), Positives = 116/327 (35%), Gaps = 70/327 (21%)
Query: 46 PFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLP 105
P + + P P+ +QK +T G S P P +P P PP + P PR P
Sbjct: 525 PSRSASPS-PRKRQK-ETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 582
Query: 106 ADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYN-SAHSSSRVPRPRLPSQRRGASCG 164
+ P + +PR P +Y+ S R P P +RR +
Sbjct: 583 SPP-PRRRSPSPRRYSPPI------------QRRYSPSPPPKRRTASPPPPPKRRASP-- 627
Query: 165 LGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGT 224
P P+ R + S + R P RR P + + G P R
Sbjct: 628 -SPPPKRRVSH------SPPPKQRSSPVTKRR---SPSLSSKHRKGSSPSRSTRE----- 672
Query: 225 GSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLR-----FPPARPA 279
AR P + R SP R R +P++S + PP+R P R +
Sbjct: 673 ---ARSPQPNKRH--------------SPSPRPR--APQTSSSPPPVRRGASSSPQRRQS 713
Query: 280 LSPSARRRCRVNWN---QSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGP--- 333
SPS R RV+ + + A+ + ++ R + S SG AA++P P P
Sbjct: 714 PSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQS 773
Query: 334 -------APYPLTPAALRPGTSPHPGR 353
+P A P SP P R
Sbjct: 774 QSPSTNWSPAVPVKKAKSPTPSPSPPR 800
Score = 31.6 bits (70), Expect = 1.1
Identities = 48/205 (23%), Positives = 69/205 (33%), Gaps = 27/205 (13%)
Query: 146 SSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTG 205
SSR R R S RR S P P R++ + + +R+ R ++R P P P
Sbjct: 161 SSREKRERSRSPRRRKS--RSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKE 218
Query: 206 ARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSS 265
P P + ++ SV A + + L P + P+
Sbjct: 219 KTPELPEPSVK------------------VKEPSVQEATSTSDI-LKVPKPEPIPEPKEP 259
Query: 266 LARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAAR 325
+ + P +R R + SR SH R R SR R+ R R
Sbjct: 260 SPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHT--RPRRRHRSRSRSYSPR----R 313
Query: 326 RPGLDPGPAPYPLTPAALRPGTSPH 350
RP P+P TP P H
Sbjct: 314 RPSPRRRPSPRRRTPPRRMPPPPRH 338
Score = 28.5 bits (62), Expect = 9.6
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 48 KKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPAD 107
KK+ PQS ++ + S GS P+ P P P P N SP +P+
Sbjct: 734 KKAASPSPQSVRRVSSSR--SVSGSPEPAAKKPPAPPSPVQSQSPSTN--WSPAVPVKKA 789
Query: 108 SEPDAYTSAPRGS 120
P S PR S
Sbjct: 790 KSPTPSPSPPRNS 802
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 53.5 bits (127), Expect = 3e-07
Identities = 88/339 (25%), Positives = 112/339 (33%), Gaps = 68/339 (20%)
Query: 50 SKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPG----PPHQPGFN------PASS 99
+KPF P S G PSP H P+P PP +P P
Sbjct: 138 AKPFSPPS----------GPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPV 187
Query: 100 PRLPLPADSEPDAYTSAPRGSG----------PTYCAGAGNSRAGGGLTKYNSAHSSSRV 149
P P P S P S P G P + G + GG + + + SS
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 150 PRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPG-PHHTGARQ 208
RP LP A P P + R A P + P P P + + Q
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP--PPQNNKPPVPSTPRPSASSQ 305
Query: 209 AGPLPGTRGR-------TRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRS-RLF 260
A P P R ++G R P R+L + ++ L PGRS L
Sbjct: 306 APPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL-------SLSSSTPPLPSPGRSGPLP 358
Query: 261 SPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHN--AQRAARHIPSRPRASG 318
P S PP+R PP R P P S N RA P P SG
Sbjct: 359 PPPSERPPPPVRDPPGRSGPLP------------PPPPVSRNGSTSRALPATPQLPSRSG 406
Query: 319 LRA-RAARRPGLDP-----GPAPYPLTPAALRPGTSPHP 351
+ + R+ RP L P G P P ++R G P
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSP 445
Score = 44.3 bits (103), Expect = 2e-04
Identities = 54/191 (28%), Positives = 65/191 (34%), Gaps = 34/191 (17%)
Query: 20 PLHPTPSEALSCWPSPPGEAY-SLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPA 78
PL PTPS AL P PP + P + + P PQ+ + T S S+ P P
Sbjct: 251 PLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 310
Query: 79 HPWTTPQPGP-----------PHQPGFN---PASSPRLPLPADSEP-------------- 110
P + P P P P P N +S+P LP P S P
Sbjct: 311 PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVR 370
Query: 111 -DAYTSAPRGSGPTYCAGAGNSR---AGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLG 166
S P P SR A L + S PRP LP R A
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAP-P 429
Query: 167 PGPESRAARQG 177
P P S + R G
Sbjct: 430 PPPPSTSIRNG 440
Score = 36.2 bits (82), Expect = 0.046
Identities = 75/284 (26%), Positives = 92/284 (32%), Gaps = 60/284 (21%)
Query: 67 GSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAP---RGSGPT 123
G GGS G GPP G A P+L A+ + D+ S P G +
Sbjct: 86 GGGGGSFGGG----------GPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRS 135
Query: 124 YCAGAGNSRAGGGLTKYNSAHSSSRVPRP---RLPSQRR--GASCGLGPGPESRAARQGL 178
A + +G G S S P P R+P R G+ P P R
Sbjct: 136 TSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQ 195
Query: 179 GGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGG 238
R + P R+P PGP P PG RG L GG
Sbjct: 196 SSPHNRG-SPPVPGGPRQPSPGP------TPPPFPGNRGTA---------------LGGG 233
Query: 239 SVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRF----PPARPALSPSARRRCRVNWNQ 294
S+ SP S FS R L P R PP P P R ++
Sbjct: 234 SIRQ---------SPLSSSSPFSNRPPLPPTPSRALDDKPPPPP---PPVGNRPSIHREA 281
Query: 295 SSRPASHNAQRAARHIPSRPRAS-GLRARAARRPGLDPGPAPYP 337
P N + +PS PR S +A P PGP P P
Sbjct: 282 VPPPPPQNNKPP---VPSTPRPSASSQAPPPPPPPSRPGPPPLP 322
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 53.5 bits (127), Expect = 3e-07
Identities = 88/339 (25%), Positives = 112/339 (33%), Gaps = 68/339 (20%)
Query: 50 SKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPG----PPHQPGFN------PASS 99
+KPF P S G PSP H P+P PP +P P
Sbjct: 138 AKPFSPPS----------GPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPV 187
Query: 100 PRLPLPADSEPDAYTSAPRGSG----------PTYCAGAGNSRAGGGLTKYNSAHSSSRV 149
P P P S P S P G P + G + GG + + + SS
Sbjct: 188 PSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFS 247
Query: 150 PRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPG-PHHTGARQ 208
RP LP A P P + R A P + P P P + + Q
Sbjct: 248 NRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP--PPQNNKPPVPSTPRPSASSQ 305
Query: 209 AGPLPGTRGR-------TRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRS-RLF 260
A P P R ++G R P R+L + ++ L PGRS L
Sbjct: 306 APPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL-------SLSSSTPPLPSPGRSGPLP 358
Query: 261 SPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHN--AQRAARHIPSRPRASG 318
P S PP+R PP R P P S N RA P P SG
Sbjct: 359 PPPSERPPPPVRDPPGRSGPLP------------PPPPVSRNGSTSRALPATPQLPSRSG 406
Query: 319 LRA-RAARRPGLDP-----GPAPYPLTPAALRPGTSPHP 351
+ + R+ RP L P G P P ++R G P
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSP 445
Score = 44.3 bits (103), Expect = 2e-04
Identities = 54/191 (28%), Positives = 65/191 (34%), Gaps = 34/191 (17%)
Query: 20 PLHPTPSEALSCWPSPPGEAY-SLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPA 78
PL PTPS AL P PP + P + + P PQ+ + T S S+ P P
Sbjct: 251 PLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 310
Query: 79 HPWTTPQPGP-----------PHQPGFN---PASSPRLPLPADSEP-------------- 110
P + P P P P P N +S+P LP P S P
Sbjct: 311 PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVR 370
Query: 111 -DAYTSAPRGSGPTYCAGAGNSR---AGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLG 166
S P P SR A L + S PRP LP R A
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAP-P 429
Query: 167 PGPESRAARQG 177
P P S + R G
Sbjct: 430 PPPPSTSIRNG 440
Score = 36.2 bits (82), Expect = 0.046
Identities = 75/284 (26%), Positives = 92/284 (32%), Gaps = 60/284 (21%)
Query: 67 GSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAP---RGSGPT 123
G GGS G GPP G A P+L A+ + D+ S P G +
Sbjct: 86 GGGGGSFGGG----------GPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRS 135
Query: 124 YCAGAGNSRAGGGLTKYNSAHSSSRVPRP---RLPSQRR--GASCGLGPGPESRAARQGL 178
A + +G G S S P P R+P R G+ P P R
Sbjct: 136 TSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQ 195
Query: 179 GGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGG 238
R + P R+P PGP P PG RG L GG
Sbjct: 196 SSPHNRG-SPPVPGGPRQPSPGP------TPPPFPGNRGTA---------------LGGG 233
Query: 239 SVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRF----PPARPALSPSARRRCRVNWNQ 294
S+ SP S FS R L P R PP P P R ++
Sbjct: 234 SIRQ---------SPLSSSSPFSNRPPLPPTPSRALDDKPPPPP---PPVGNRPSIHREA 281
Query: 295 SSRPASHNAQRAARHIPSRPRAS-GLRARAARRPGLDPGPAPYP 337
P N + +PS PR S +A P PGP P P
Sbjct: 282 VPPPPPQNNKPP---VPSTPRPSASSQAPPPPPPPSRPGPPPLP 322
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 53.5 bits (127), Expect = 3e-07
Identities = 97/373 (26%), Positives = 130/373 (34%), Gaps = 79/373 (21%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPPGEAYSL-PELPFKKSKPFLPQSKQKADTETIGSS 69
P + T P H + L SPP +A+ PE P ++ + A + G
Sbjct: 84 PGVATTPLGPEHMAQASTLGL--SPPSQAFPAHPEAPAAAARAAALVAHPGAGSYPCG-- 139
Query: 70 GGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEP--DAYTSAPRGSGPTYCAG 127
GGS G P+ P PP P P SP P P P YT+ G G + +G
Sbjct: 140 GGSSGAQPSAP-------PPPAPPLPPTPSPPPPPPPPPPPALSGYTTTNSGGGGS--SG 190
Query: 128 AGNSRAGGGLTKYN-SAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARAR 186
G+SR + +A +++ P QR G P P +A G + +
Sbjct: 191 KGHSRDFVLRRDLSATAPAAAMHGAPLGGEQRSGTGSPQHPAPPPHSA----GMFISASG 246
Query: 187 TRRGPHRTRRPE--PGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRG------- 237
T GP + P P H T G G+ R G +AA A L G
Sbjct: 247 TYAGPDGSGGPALFPALHDTPGAPGGHPHPLNGQMR-LGLAAAAAAAAAELYGRAEPPFA 305
Query: 238 --------GSVAAAAAARCLGLSPPGRSRLFSPRSSLAR----PPLRF--PPARPALSPS 283
G+VAAAAAA G + + ++ A P L+ PP P P+
Sbjct: 306 PRSGDAHYGAVAAAAAAALHGYGAVNLNLNLAAAAAAAAAGPGPHLQHHAPPPAPPPPPA 365
Query: 284 ARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRP---------------- 327
PA H Q H P P A+G R R+P
Sbjct: 366 --------------PAQHPHQ----HHPHLPGAAGAFLRYMRQPIKQELICKWIDPDELA 407
Query: 328 GLDPGPAPYPLTP 340
GL P P P P P
Sbjct: 408 GLPPPPPPPPPPP 420
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 52.8 bits (125), Expect = 5e-07
Identities = 81/330 (24%), Positives = 113/330 (34%), Gaps = 55/330 (16%)
Query: 55 PQSKQKADTETIGSSGGSRGPSPAHPWTTPQP-GPPHQPGFNPASSPRLPL---PADSEP 110
P + KA+ ++ + P PA P P P PP P + P P PA S P
Sbjct: 500 PDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTP 559
Query: 111 DAYTSAP----RGSGPTYCAGAGNSRAGG---GLTKYNSAHSSSRVPRPRLPSQRRGASC 163
+A G G T +G+ A L VP P P +
Sbjct: 560 TPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPK 619
Query: 164 GLGPGPESRAARQGLG---------GRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPG 214
G G GP + QGLG R R + + + ++ + H G+ P+P
Sbjct: 620 GDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPP 679
Query: 215 TRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSL-------- 266
+ + G A + P A LG PP F PR +
Sbjct: 680 SPPQPVTLGAVPAPQAPP------PPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPR 733
Query: 267 ---ARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARA 323
RPPL F P P + PS + + S +++ RH P+ R G
Sbjct: 734 LLQGRPPLDFYP--PGVHPSG-----LVPRERSDSGGSSSEPFDRHAPAMLRERG----- 781
Query: 324 ARRPGLDPGPA----PYPLTPAALRPGTSP 349
P +DP A + TPA RP TSP
Sbjct: 782 --TPPVDPKLAWVGDVFTATPAEPRPLTSP 809
Score = 28.5 bits (62), Expect = 9.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 67 GSSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLP 105
G+S S P+P W P +PG PA P LP P
Sbjct: 378 GNSPNSEPPTPKTAWAETSRPPETEPG-PPAPKPPLPPP 415
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 52.4 bits (124), Expect = 6e-07
Identities = 77/269 (28%), Positives = 94/269 (34%), Gaps = 47/269 (17%)
Query: 67 GSSGGSRGPSPAHPWTTPQPGPPHQ-PGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYC 125
G +G RGP A P GPP Q PG P P P P A S +
Sbjct: 339 GHAGRPRGPEAARPCAR---GPPSQEPG------PPRPWPCALRPRPRLRAALPSRRLFS 389
Query: 126 AGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAAR-QGLGGRSAR 184
GA L H VP + A L PE R Q +G S
Sbjct: 390 RGAAQQ-----LPCCYKLHPGRHVPLRPFKEKHSEARRRL---PEPRQLHLQPVGANSVE 441
Query: 185 ARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSA-ARGPA----RHLRGGS 239
RR R RPEPGP GAR P P T A+ GS+ A+ P+ R GG+
Sbjct: 442 RAARR---RRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGGA 498
Query: 240 VAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPA 299
V A + LG L S PLR P + P R
Sbjct: 499 VGARSPGDVLG----SGGGLIGSDSLPPADPLRLSHPEPGVVPFQNLR------------ 542
Query: 300 SHNAQRAARHIPSRPRASGLRARAARRPG 328
+QR R+ PS R G+ ++ +PG
Sbjct: 543 ---SQRDLRN-PSHQRKPGVHVTSSVQPG 567
Score = 36.6 bits (83), Expect = 0.035
Identities = 55/165 (33%), Positives = 63/165 (38%), Gaps = 19/165 (11%)
Query: 199 PGPHHTGARQAGP-LPGTRGRTRAAGTGS-AARGPARHLRGGSVAAAAAARC---LGLSP 253
P P QAGP PG GR R ARGP G A R L +
Sbjct: 323 PCPAAEPVSQAGPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPRLRAAL 382
Query: 254 PGRSRLFSPRSSLARP------PLRFPPARPALSP--SARRRCRVNWNQSSRPASHNA-Q 304
P R RLFS ++ P P R P RP ARRR +P N+ +
Sbjct: 383 PSR-RLFSRGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQPVGANSVE 441
Query: 305 RAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSP 349
RAAR +RP R A P PGP P P A G+SP
Sbjct: 442 RAARRRRTRPEPGPARRGARAEP---PGP-PTLQDPPASHLGSSP 482
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 52.4 bits (124), Expect = 6e-07
Identities = 77/269 (28%), Positives = 94/269 (34%), Gaps = 47/269 (17%)
Query: 67 GSSGGSRGPSPAHPWTTPQPGPPHQ-PGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYC 125
G +G RGP A P GPP Q PG P P P P A S +
Sbjct: 339 GHAGRPRGPEAARPCAR---GPPSQEPG------PPRPWPCALRPRPRLRAALPSRRLFS 389
Query: 126 AGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAAR-QGLGGRSAR 184
GA L H VP + A L PE R Q +G S
Sbjct: 390 RGAAQQ-----LPCCYKLHPGRHVPLRPFKEKHSEARRRL---PEPRQLHLQPVGANSVE 441
Query: 185 ARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSA-ARGPA----RHLRGGS 239
RR R RPEPGP GAR P P T A+ GS+ A+ P+ R GG+
Sbjct: 442 RAARR---RRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGGA 498
Query: 240 VAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPA 299
V A + LG L S PLR P + P R
Sbjct: 499 VGARSPGDVLG----SGGGLIGSDSLPPADPLRLSHPEPGVVPFQNLR------------ 542
Query: 300 SHNAQRAARHIPSRPRASGLRARAARRPG 328
+QR R+ PS R G+ ++ +PG
Sbjct: 543 ---SQRDLRN-PSHQRKPGVHVTSSVQPG 567
Score = 36.6 bits (83), Expect = 0.035
Identities = 55/165 (33%), Positives = 63/165 (38%), Gaps = 19/165 (11%)
Query: 199 PGPHHTGARQAGP-LPGTRGRTRAAGTGS-AARGPARHLRGGSVAAAAAARC---LGLSP 253
P P QAGP PG GR R ARGP G A R L +
Sbjct: 323 PCPAAEPVSQAGPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPRLRAAL 382
Query: 254 PGRSRLFSPRSSLARP------PLRFPPARPALSP--SARRRCRVNWNQSSRPASHNA-Q 304
P R RLFS ++ P P R P RP ARRR +P N+ +
Sbjct: 383 PSR-RLFSRGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQPVGANSVE 441
Query: 305 RAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSP 349
RAAR +RP R A P PGP P P A G+SP
Sbjct: 442 RAARRRRTRPEPGPARRGARAEP---PGP-PTLQDPPASHLGSSP 482
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 52.0 bits (123), Expect = 8e-07
Identities = 62/249 (24%), Positives = 81/249 (32%), Gaps = 39/249 (15%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSG 70
P AS + SPL P +A +PP +A P F PF P + + +
Sbjct: 772 PPASLPM-SPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS--LPMSPLATPP 828
Query: 71 GSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPR-------GSGPT 123
P A P P PP P P P PD S PR G P
Sbjct: 829 PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP-----GPDTSVSGPRLTLALAPGPPPP 883
Query: 124 YCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGP---------------G 168
++ +G L ++S+ +S+ S G + P G
Sbjct: 884 PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 943
Query: 169 PESRAARQGLGGRSARARTRRGP---------HRTRRPEPGPHHTGARQAGPLPGTRGRT 219
P A +G G GP + T PE GA GP PGT G
Sbjct: 944 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 1003
Query: 220 RAAGTGSAA 228
AAG G+ A
Sbjct: 1004 AAAGAGAGA 1012
Score = 43.1 bits (100), Expect = 4e-04
Identities = 106/397 (26%), Positives = 141/397 (35%), Gaps = 74/397 (18%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPPGEA----YSLP--ELPFKKSKPFL--PQSKQKAD 62
P + TL SP PS+A +PP +A ++P ++P + P L P S
Sbjct: 351 PPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALS 410
Query: 63 TETIGSSGGSRGPSPAHPWTTPQP-------GPPHQPGFNPASSPRL--PLPADSEPDAY 113
+ +S GS H + T P P +P P SP L PL + P
Sbjct: 411 SLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQ 470
Query: 114 TS-APRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPES- 171
TS +P S + +A L ++ S + P L +Q A L P S
Sbjct: 471 TSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASL 530
Query: 172 ---------RAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAA 222
A L SA T PH P P P QA P P T T
Sbjct: 531 TTPPLENLPSLAPPPLQTASAPLTT---PHLETPPCPAP---CPLQAPPSPLT---TPPP 581
Query: 223 GTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSS----LARPPLRFPPARP 278
T S+ P + A A+ GL P S L +P LA PPL+ PP+ P
Sbjct: 582 ETPSSIATPPPQ----APPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPP 637
Query: 279 AL---------SPSARRRCRVNWNQS--SRPASHNAQRAARHIPSRPRASGLRARAARRP 327
A SP A V+ Q+ S P S Q P P AS + +A P
Sbjct: 638 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ-----APFSPPASPPVSPSATPP 692
Query: 328 GLDP-------------GPAPYPLTPAALRPGTSPHP 351
P PA P++P+A P +P P
Sbjct: 693 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 729
Score = 42.0 bits (97), Expect = 8e-04
Identities = 80/325 (24%), Positives = 105/325 (32%), Gaps = 77/325 (23%)
Query: 59 QKADTETIGSSGGSRGPSPAHPWTTPQPGPPHQPGF---NPASSP-------RLPLPADS 108
+K E G GG+ P A P+ GP G NPAS P R P ++
Sbjct: 55 RKPLAERAGGIGGATIPESA-----PRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNT 109
Query: 109 EPDAYTSAPRGSGPTYCAGAGNSR---------AGGGLT---KYNSAHSSSR-------- 148
P +S R SG T G A G T K ++ + +R
Sbjct: 110 SPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP 169
Query: 149 -VPRPRLPSQRRGASCGLG---------PGPESRAARQGLGGRSARARTRRGPHRTRRPE 198
P P + + R A +G P P + R+ + S + T P RRP
Sbjct: 170 GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPS 229
Query: 199 PGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSR 258
G G Q P +R + +A + PAR A A P G
Sbjct: 230 AG----GGLQR---PASRSLSSSA---TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279
Query: 259 LFSPRSSLARPPLRFPP---ARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPR 315
L RPP PP A PAL P SS P + + + P P
Sbjct: 280 L--------RPPQVTPPRKDAAPALGP-----------LSSSPLATPSPSGTKARPVPPP 320
Query: 316 ASGLRARAARRPGLDPGPAPYPLTP 340
+ A P P P PL P
Sbjct: 321 DNAATPLPATLPPSPPLATPLPLAP 345
Score = 39.3 bits (90), Expect = 0.005
Identities = 103/370 (27%), Positives = 122/370 (32%), Gaps = 55/370 (14%)
Query: 10 LPAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSS 69
L AS LT+P TP P P P P P P S I +
Sbjct: 546 LQTASAPLTTPHLETP-------PCPAPCPLQAPPSPLTTPPPETPSS--------IATP 590
Query: 70 GGSRGPSPAHPWTTPQPGPPHQPGFNPA--SSPRLPLPA-DSEPDAYTSAPRGSGPTYCA 126
P+ A P P PP P P + P L LP + P S P T
Sbjct: 591 PPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSP 650
Query: 127 GAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGP---GPESRAARQGLGGRSA 183
A N+ A L S S V P P S P P S AA S
Sbjct: 651 QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 710
Query: 184 RARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAA 243
A P T P+ P A PL + +A P R V
Sbjct: 711 PASPPMSPSATPPPQAPP----PLAAPPLQVPPSPPASPPMSPSATPPPR------VPPL 760
Query: 244 AAARCLGLSPPGRSRLFSPRSSLARPPLRFPP--ARPAL----SPSARRRCRVNWNQS-S 296
AA L + P + L P S LA+PP + PP A P L SP A + ++ S S
Sbjct: 761 LAAPPLQVPPSPPASL--PMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS 818
Query: 297 RPASHNAQRAAR----------HIPSRPRASGLRARAARRPGLDPGP---APYPLTPAAL 343
P S A + +P P AS +A RRP PGP P AL
Sbjct: 819 LPMSPLATPPPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPP-TPGPDTSVSGPRLTLAL 876
Query: 344 RPGTSPHPGR 353
PG P P R
Sbjct: 877 APGPPPPPSR 886
Score = 34.7 bits (78), Expect = 0.13
Identities = 51/192 (26%), Positives = 63/192 (32%), Gaps = 31/192 (16%)
Query: 180 GRSARARTRRGPHR-TRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGG 238
G +AR R P T RP P P P T R G A R G
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRP-------PPPVTPAALRVLGAAGAVGRKPLAERAG 63
Query: 239 SVAAAAAARCLGLSPPGRSRLFSPRSSLARPPL-----RFPPAR-----PALSPSARRRC 288
+ A + P RS S R+ +RPP R PPA+ P SP
Sbjct: 64 GIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA--- 120
Query: 289 RVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG-----PAPYPLTPAAL 343
+ ++RP Q+ R A G A +R L G P P TP+
Sbjct: 121 ----SGTTRPGP-LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 175
Query: 344 RPGTSPHPGREV 355
S G EV
Sbjct: 176 MARRSRAAGTEV 187
Score = 32.0 bits (71), Expect = 0.87
Identities = 38/131 (29%), Positives = 49/131 (37%), Gaps = 14/131 (10%)
Query: 236 RGGSVAAAAAARCLGL---SPPGRSRLFSPRSSLARPPLRFPPARPALS--PSARRRCRV 290
+ G+ A AAR GL PPG R P + LR A A+ P A R +
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPR---PPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 291 NWNQSSRPA-----SHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYP-LTPAALR 344
A + +A ++R+ SRP ASG RA PGP P R
Sbjct: 66 GGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTR 125
Query: 345 PGTSPHPGREV 355
PG G +
Sbjct: 126 PGPLGQKGLRI 136
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 52.0 bits (123), Expect = 8e-07
Identities = 81/282 (28%), Positives = 100/282 (35%), Gaps = 33/282 (11%)
Query: 73 RGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSR 132
R P P T PQP P S P P+P + +AP G G S
Sbjct: 12 RPPDPNSVRTVPQPETRLDHN-RPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSP 70
Query: 133 AG--GGLTKYNSAHSSSRVPRPR---LPSQRRGASCGLG-PGPESRAARQGLGGRSARAR 186
+ ++ R P PR L R + G G G ++R + GL + R R
Sbjct: 71 PAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPR 130
Query: 187 TRRGPHRTRRPEPGPHHTGARQA-------GPLPGTRGRTRAAGTGSAARGPARHLRGGS 239
R P R RP PG G R A P P R R R +G GS A+ P + G
Sbjct: 131 APRTPLRPERPAPGV--PGGRVAPCTCTSGSPSPRPR-RLRVSGRGSPAQLPPTYQLLGY 187
Query: 240 VAAAAAARCLGLSPPG--------RSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVN 291
A A SP G RS+ PPL PAR P A R R
Sbjct: 188 HRAPPRA-----SPGGWNTETLNTEDARRRARSATQAPPLALVPARSRARP-AHLRVRAA 241
Query: 292 WNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGP 333
+S R +RH+ S R G R + R LD P
Sbjct: 242 -GRSRHRVLLALSRESRHL-SGARERGRAGRYSNRRNLDSLP 281
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 52.0 bits (123), Expect = 8e-07
Identities = 88/349 (25%), Positives = 124/349 (35%), Gaps = 60/349 (17%)
Query: 33 PSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSP-----AHPWTTPQPG 87
PSP + P P P+ Q T SSGG GP P P T+ PG
Sbjct: 463 PSPEAGGTTGPWTSTTSEVPRPPEPSQGPSTT---SSGGGTGPHPPSGTTLRPPTSSTPG 519
Query: 88 PP--------HQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTK 139
P HQP + + P P S+P P G G T + + +GG
Sbjct: 520 GPPGAENSTSHQPATPGGDTAQTPKPGTSQP-----MPPGVG-TSTSHQPATPSGGTAQT 573
Query: 140 YNSAHSSSRVPRPRLPSQRRGASCGLGPG--PE---SRAARQGLGGRSARARTRRGPHRT 194
S P + + A+ G G PE S+ G+G ++ T G
Sbjct: 574 PEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTA 633
Query: 195 RRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLG---- 250
+ PEPG + P+P ++ T S+ GP+ R V AA LG
Sbjct: 634 QTPEPG-------TSQPMPLSK------STPSSGGGPSEDKRFSVVDMAALGGVLGALLL 680
Query: 251 LSPPGRSRL----FSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRA 306
L+ G + L + PR P + + + + NW P +H+ + A
Sbjct: 681 LALLGLAVLVHKHYGPRLKCCSGKAPEPQPQGFDNQAFLPDHKANWAPVPSP-THDPKPA 739
Query: 307 ARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTSPHPGREV 355
+P+ P G PG AP P PAA R G SP R +
Sbjct: 740 EAPMPAEPAPPG---------PASPGGAPEP--PAAARAGGSPTAVRSI 777
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 51.6 bits (122), Expect = 1e-06
Identities = 81/282 (28%), Positives = 100/282 (35%), Gaps = 33/282 (11%)
Query: 73 RGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSR 132
R P P T PQP P S P P+P + +AP G G S
Sbjct: 12 RPPDPNSVRTVPQPETRLDHN-RPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSP 70
Query: 133 AG--GGLTKYNSAHSSSRVPRPR---LPSQRRGASCGLG-PGPESRAARQGLGGRSARAR 186
+ ++ R P PR L R + G G G ++R + GL + R R
Sbjct: 71 PAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPR 130
Query: 187 TRRGPHRTRRPEPGPHHTGARQA-------GPLPGTRGRTRAAGTGSAARGPARHLRGGS 239
R P R RP PG G R A P P R R R +G GS A+ P + G
Sbjct: 131 APRTPLRPERPAPGV--PGGRVAPCTCTSGSPSPRPR-RLRVSGRGSPAQLPPTYQLLGY 187
Query: 240 VAAAAAARCLGLSPPG--------RSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVN 291
A A SP G RS+ PPL PAR P A R R
Sbjct: 188 HRAPPRA-----SPGGWNTETLNTEDARRRARSATQAPPLALVPARSRARP-AHLRVRAA 241
Query: 292 WNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGP 333
+S R +RH+ S R G R + R LD P
Sbjct: 242 -GRSRHRVLLALSRESRHL-SGARERGRAGRYSTRRNLDSLP 281
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 51.6 bits (122), Expect = 1e-06
Identities = 81/282 (28%), Positives = 100/282 (35%), Gaps = 33/282 (11%)
Query: 73 RGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSR 132
R P P T PQP P S P P+P + +AP G G S
Sbjct: 12 RPPDPNSVRTVPQPETRLDHN-RPMSRPIFPVPLARRTELPGAAPAGEPRRGDPGVAPSP 70
Query: 133 AG--GGLTKYNSAHSSSRVPRPR---LPSQRRGASCGLG-PGPESRAARQGLGGRSARAR 186
+ ++ R P PR L R + G G G ++R + GL + R R
Sbjct: 71 PAPEDSDARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGAQTREGKMGLPDSARRPR 130
Query: 187 TRRGPHRTRRPEPGPHHTGARQA-------GPLPGTRGRTRAAGTGSAARGPARHLRGGS 239
R P R RP PG G R A P P R R R +G GS A+ P + G
Sbjct: 131 APRTPLRPERPAPGV--PGGRVAPCTCTSGSPSPRPR-RLRVSGRGSPAQLPPTYQLLGY 187
Query: 240 VAAAAAARCLGLSPPG--------RSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVN 291
A A SP G RS+ PPL PAR P A R R
Sbjct: 188 HRAPPRA-----SPGGWNTETLNTEDARRRARSATQAPPLALVPARSRARP-AHLRVRAA 241
Query: 292 WNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGP 333
+S R +RH+ S R G R + R LD P
Sbjct: 242 -GRSRHRVLLALSRESRHL-SGARERGRAGRYSTRRNLDSLP 281
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 51.6 bits (122), Expect = 1e-06
Identities = 83/310 (26%), Positives = 98/310 (31%), Gaps = 68/310 (21%)
Query: 67 GSSGGSRGPSPAHP-----WTTPQPGP----------PHQPGFNPASSPRLPL-PADSEP 110
GS G+ G PA P P+P P P +PG SPR PL PA P
Sbjct: 65 GSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPG---PPSPRRPLVPAGPAP 121
Query: 111 DAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPE 170
A P G SA S + VP A+ + GPE
Sbjct: 122 PAAKLRPPPEG--------------------SAGSCAPVP----------AAAAVAAGPE 151
Query: 171 SRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGP-LPGTRGRTRAAGTGSAAR 229
A A R GP P PGP + AGP T + A A
Sbjct: 152 PAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAA 211
Query: 230 GPARHLRGGSVAA------AAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPS 283
PA L AA AA + +PP P + PP PA PA +P
Sbjct: 212 APAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP- 270
Query: 284 ARRRCRVNWNQSSRPASHNAQRAARHIPSRPRAS-GLRARAARRPGLDPGPAPYPLTPAA 342
PA R H P A+ + AA + G G AP P A
Sbjct: 271 ----------PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAG 320
Query: 343 LRPGTSPHPG 352
G S PG
Sbjct: 321 GPAGVSGQPG 330
Score = 39.3 bits (90), Expect = 0.005
Identities = 76/297 (25%), Positives = 99/297 (33%), Gaps = 45/297 (15%)
Query: 10 LPAASCTLTSPLHPTPS-EALSCWPSPPGEAYSL-PE-LPFKKSKPFLPQSKQKADTETI 66
+PA + L P P A SC P P A + PE P +KP P +
Sbjct: 115 VPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAA-------LA 167
Query: 67 GSSGGSRGPSPAHPWTTPQPGPPHQPGF-------------NPASSPRLPLPADSEPDAY 113
+G GP P P P PG P PG + A++P + L ++ P A
Sbjct: 168 ARAGPGPGPGPG-PGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL-VNNGPAAL 225
Query: 114 TSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRA 173
P+ + P G +A S P P P+ A P P + A
Sbjct: 226 LPLPKPAAPGTVIQTPPF-VGAAAPPAPAAPSPPAAPAPAAPA---AAPPPPPPAPATLA 281
Query: 174 ARQG--LGGRSAR------ARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTG 225
G G +A A + G P P P G PG A G
Sbjct: 282 RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPG 341
Query: 226 SAARGPARHLRGGSVAAAAAARCLGLSPP---GRSRLFSPRSSLARP-PLRFPPARP 278
A P R ++ AA AA+ L S P S + P A P P PP P
Sbjct: 342 VKAESPKRVVQ----AAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAP 394
Score = 38.5 bits (88), Expect = 0.009
Identities = 54/209 (25%), Positives = 69/209 (33%), Gaps = 24/209 (11%)
Query: 23 PTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWT 82
P P+ + +PP + P P S P P A P P P
Sbjct: 229 PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPA-----------AAPPPPPPAP 277
Query: 83 TPQPGPPHQPGFNPASSPRLPLPA-----DSEPDAYTSAPRGSGPTYCAG-AGNSRAGGG 136
PP P P ++P +P PA S A AP GP +G G A
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAA 337
Query: 137 LTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRR 196
A S RV + P+ + A+ GP S AA +G A P
Sbjct: 338 PAPGVKAESPKRVVQAAPPAAQTLAA----SGPASTAASMVIGPTMQGALP--SPAAVPP 391
Query: 197 PEPG-PHHTGARQAGPLPGTRGRTRAAGT 224
P PG P AG + + RT A T
Sbjct: 392 PAPGTPTGLPKGAAGAVTQSLSRTPTATT 420
Score = 37.7 bits (86), Expect = 0.016
Identities = 52/180 (28%), Positives = 58/180 (32%), Gaps = 32/180 (17%)
Query: 169 PESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAA 228
PE RAA G G + + G P GA A P P GR R G G
Sbjct: 48 PEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAE---GAPGAAPEPPPAGRARPGGGGPQR 104
Query: 229 RGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRC 288
GP R V A A L PP S S P A P +P+
Sbjct: 105 PGPPSPRRP-LVPAGPAPPAAKLRPPPEG---SAGSCAPVPAAAAVAAGPEPAPAG---- 156
Query: 289 RVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAALRPGTS 348
PA P+ P A RA PG PGP P P PA PG +
Sbjct: 157 ---------PAK----------PAGPAALAARAGPGPGPGPGPGPGPGPGKPAG--PGAA 195
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 51.2 bits (121), Expect = 1e-06
Identities = 87/348 (25%), Positives = 106/348 (30%), Gaps = 47/348 (13%)
Query: 44 ELPFKKSKPFLPQ-SKQKADTETIGSSG--------GSRGPS-----------PAHPWTT 83
E+P + P P S+ D ET G G G RGP+ P P
Sbjct: 85 EVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPP 144
Query: 84 PQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSA 143
PGPP PG +P+L D + S P GP+ G G +
Sbjct: 145 GPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGP 204
Query: 144 HSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGP-HRTRRPEPG-- 200
P P RG PGP + G G+ R R P + R PG
Sbjct: 205 PGEPGEPGASGPMGPRGP-----PGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA 259
Query: 201 --PHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSV---AAAAAARCLGLSPPG 255
P G R L G +G AG P + G + G P
Sbjct: 260 GLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
Query: 256 RSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPR 315
+R + A PP PA P P A Q P + R P P
Sbjct: 320 GARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQG--PRGSEGPQGVRGEPGPPG 377
Query: 316 ASGLRARAARRPGLD-----------PGPAPYPLTPAALRPGTSPHPG 352
+G A A PG D PG A P P A P PG
Sbjct: 378 PAG-AAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPG 424
Score = 35.4 bits (80), Expect = 0.078
Identities = 50/160 (31%), Positives = 55/160 (34%), Gaps = 9/160 (5%)
Query: 67 GSSG--GSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTY 124
GS G GS G T P GPP PG A P PA D + P +GP
Sbjct: 1022 GSPGRDGSPGAKGDRGETGPA-GPPGAPGAPGAPGP--VGPAGKSGDRGETGP--AGPAG 1076
Query: 125 CAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGP-GPESRAARQGLGGRSA 183
G +R G + R RG S GP GP QG G S
Sbjct: 1077 PVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASG 1136
Query: 184 RARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAG 223
A R P P + GP PG RGRT AG
Sbjct: 1137 PAGPRGPPGSAGAPGKDGLNGLPGPIGP-PGPRGRTGDAG 1175
Score = 33.5 bits (75), Expect = 0.30
Identities = 43/155 (27%), Positives = 54/155 (34%), Gaps = 22/155 (14%)
Query: 71 GSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRG-SGPTYCAGAG 129
G+RGPS P PGP G A + A EP P G GP AG
Sbjct: 413 GARGPSGPQGPGGP-PGPKGNSGEPGAPGSKGDTGAKGEP-----GPVGVQGPPGPAGEE 466
Query: 130 NSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRR 189
R G + +P P P +R G PG + A +G G R
Sbjct: 467 GKRGARG------EPGPTGLPGP--PGERGGPGSRGFPGADGVAGPKGPAGE-------R 511
Query: 190 GPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGT 224
G P+ P G LPG +G T + G+
Sbjct: 512 GSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS 546
Score = 32.7 bits (73), Expect = 0.51
Identities = 50/190 (26%), Positives = 61/190 (32%), Gaps = 32/190 (16%)
Query: 60 KADTETIGSSG--GSRGPSPAHPWTTPQPGPPHQPGFN-PASSPRLPLPADSEPDAYTSA 116
K T + GS G G GP P +PGPP PG A P P + + +
Sbjct: 538 KGLTGSPGSPGPDGKTGP-PGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAG 596
Query: 117 PRG-SGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLG--------- 166
RG GP G G + P P P+ RG G
Sbjct: 597 ERGVPGPPGAVGPAGKDGEAG---------AQGPPGPAGPAGERGEQGPAGSPGFQGLPG 647
Query: 167 ----PGPESRAARQGLGGR-----SARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRG 217
PG + QG+ G + AR RG R + P G R A PG G
Sbjct: 648 PAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDG 707
Query: 218 RTRAAGTGSA 227
AG A
Sbjct: 708 AKGDAGAPGA 717
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 50.1 bits (118), Expect = 3e-06
Identities = 102/382 (26%), Positives = 131/382 (34%), Gaps = 62/382 (16%)
Query: 7 QVTLPAASCTLTSPLHPT--PSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTE 64
Q L AA+ T + + T P + + PPG L L ++ L + Q
Sbjct: 779 QAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGSG--LGNLGAGQTPRHLKRL-QSLIPS 835
Query: 65 TIGSSGGSRGPSPAHPWTTPQPGPPHQPGFN-PAS-SPRLPLPADSEPDAYTSAPRGSGP 122
+GS+ + PS ++ GF+ PA SP LP + S P +P S P
Sbjct: 836 ALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGACGSP--SAP 893
Query: 123 TYCAG-AGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASC--GLGPGPESRAARQGLG 179
T AG A + AG G S S P L + GA P P AR GLG
Sbjct: 894 TPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLG 953
Query: 180 GRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGS 239
P +R P P Q G PG A G S P R S
Sbjct: 954 ---LPEHFLPPPPSSRSPSSSPG-----QLGQPPGELSLGLATGPLSTPETPPRQPEPPS 1005
Query: 240 VAAAAAARCL--------GLSPPGRS------------RLFSPRSSLARPPLRFPP---- 275
+ A A+ GLSPPG S R SL PP PP
Sbjct: 1006 LVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQV 1065
Query: 276 ----ARPALSPSARRRCRVNWNQSSRPA-----SHNAQRAARH--------IPSRPRASG 318
P L+P R + +S+PA + +RA+ H P PRA G
Sbjct: 1066 PQRRGTPPLTPG-RLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGG 1124
Query: 319 LRARAARRPGLDPGPAPYPLTP 340
+ GL P PY P
Sbjct: 1125 GSGGSGSSGGLGPPGRPYGAIP 1146
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 50.1 bits (118), Expect = 3e-06
Identities = 81/273 (29%), Positives = 101/273 (36%), Gaps = 58/273 (21%)
Query: 131 SRAGGGLTKYNSAHSSSRVPRPRLPSQRR--GASCGLGPGPESRAARQGLGGRSA-RART 187
+RA G LT S R P P P+ R GA+ +G P + A G+GG + +
Sbjct: 19 ARAPGLLTP--RPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAG-GIGGATIPESAP 75
Query: 188 RRGPHRTRRP---------------EPGPHHTGARQAGPL-PGTRGR--TRAAGTGSAAR 229
R GP RT RP PGP + R +G PG G+ R + + AR
Sbjct: 76 RAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVAR 135
Query: 230 GPARHLRGGSVAAAAAARCLGLSPPG--------RSRLFSPRSSLARPPLRFPPARP--- 278
G A S +A A R PG RSR L RP P ARP
Sbjct: 136 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPA---PSARPRPP 192
Query: 279 -----------------ALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRA 321
SP+ARRR RPAS + +A + S P SG A
Sbjct: 193 TEGPRKSVSSASEHSTTEPSPAARRRPSAG-GGLQRPASRSLSSSATPL-SSPARSGPSA 250
Query: 322 RAARRPGLDPGPAPYPLTPAALRPGTSPHPGRE 354
R R P P P ALRP P ++
Sbjct: 251 RGTPRAPAHPS-QPKPKGLQALRPPQVTPPRKD 282
Score = 49.3 bits (116), Expect = 5e-06
Identities = 60/233 (25%), Positives = 78/233 (33%), Gaps = 38/233 (16%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSG 70
P AS +P P+ S +S +PP +A + P + P P S
Sbjct: 495 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS------------- 541
Query: 71 GSRGPSPAHPWTTPQPGPPHQ---PGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAG 127
P+ P P PGP P A +P P P P + S P +G + A
Sbjct: 542 ----PTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 597
Query: 128 AGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASC---GLGPGPESRAARQGLGGRSAR 184
+ G Y+S P P A+C GP A +G G
Sbjct: 598 STPEELRG----YDSGPEGGAAASP--PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 651
Query: 185 ARTRRGP---------HRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAA 228
GP + T PE GA GP PGT G AAG G+ A
Sbjct: 652 WPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGA 704
Score = 40.8 bits (94), Expect = 0.002
Identities = 65/264 (24%), Positives = 84/264 (31%), Gaps = 35/264 (13%)
Query: 11 PAASCTLTSP---LHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIG 67
P A L +P L P +A +PP +A P F PF P + +
Sbjct: 460 PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS--LPMSPLA 517
Query: 68 SSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPR-------GS 120
+ P A P P PP P P P PD S PR G
Sbjct: 518 TPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP-----GPDTSVSGPRLTLALAPGP 572
Query: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
P ++ +G L ++S+ +S+ P + RG G G +
Sbjct: 573 PPPPSRSPSSTLSGPDLAGHSSSATST-------PEELRGYDSGPEGGAAASPPPDAELA 625
Query: 181 RSARARTRRGPH-------RTRRPEPGPHHTGARQAGPLPG---TRGRTRAA-GTGSAAR 229
A RGP P P P TG A L T G A G+
Sbjct: 626 ACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDP 685
Query: 230 GPARHLRGGSVAAAAAARCLGLSP 253
GP+ GG AA A A SP
Sbjct: 686 GPSPGTSGGKAAAGAGAGASSRSP 709
Score = 39.3 bits (90), Expect = 0.005
Identities = 78/329 (23%), Positives = 113/329 (34%), Gaps = 52/329 (15%)
Query: 61 ADTETIGSSGGSRGPSPAHPWTT-------PQPGPPHQPGFNPASSPRLPLPADSEPDAY 113
A +T G + G+ P+ A P+P P +P P PR + + SE
Sbjct: 151 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR-PPTEGPRKSVSSASEHSTT 209
Query: 114 TSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRA 173
+P A AGGGL + S SS P++ ++ G P +
Sbjct: 210 EPSP--------AARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPS 261
Query: 174 ARQGLGGRSARARTRRGPHRTRRPEPGPHH-----TGARQAGPLPGTRGRTRAAGTGSAA 228
+ G ++ R P + P GP T + A P P + + A
Sbjct: 262 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPAT 321
Query: 229 RGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS--SLARPPLRFPPARPAL------ 280
GS A L P P++ +LA PPL+ PP+ PA
Sbjct: 322 PPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPL 381
Query: 281 ---SPSARRRCRVNWNQS--SRPASHNAQRAARHIPSRPRASGLRARAARRPGLDP---- 331
SP A V+ Q+ S P S Q P P AS + +A P P
Sbjct: 382 ATPSPQAPNALAVHLLQAPFSPPPSPPVQ-----APFSPPASPPVSPSATPPSQAPPSLA 436
Query: 332 ---------GPAPYPLTPAALRPGTSPHP 351
PA P++P+A P +P P
Sbjct: 437 APPLQVPPSPPASPPMSPSATPPPQAPPP 465
Score = 36.6 bits (83), Expect = 0.035
Identities = 78/326 (23%), Positives = 106/326 (32%), Gaps = 60/326 (18%)
Query: 55 PQSKQKADTETIGSSGGSRGPS-------PAHP----------WTTPQPGPPHQ---PGF 94
P S+ + + T SS GPS PAHP PQ PP + P
Sbjct: 228 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287
Query: 95 NPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRL 154
P SS L P+ S P + ++ P S+A L + S +P P L
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL 347
Query: 155 PSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPG 214
L P L A P + P P A L
Sbjct: 348 SP--------LATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQA 399
Query: 215 TRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFP 274
+ + PA S + +A +PP SLA PPL+ P
Sbjct: 400 PFSPPPSPPVQAPFSPPA------SPPVSPSATPPSQAPP----------SLAAPPLQVP 443
Query: 275 PARPA---LSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAA--RRPGL 329
P+ PA +SPSA Q+ P + + A+ P P A A P
Sbjct: 444 PSPPASPPMSPSATPP-----PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 498
Query: 330 DPGPAPY------PLTPAALRPGTSP 349
PG AP+ P++P A P +P
Sbjct: 499 FPGQAPFSPSASLPMSPLATPPPQAP 524
Score = 34.7 bits (78), Expect = 0.13
Identities = 92/366 (25%), Positives = 119/366 (32%), Gaps = 62/366 (16%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSG 70
P S T P P+ AL +PP S P P P P + + S
Sbjct: 345 PPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 404
Query: 71 GS---RGP--SPAHPWTTPQPGPPHQPGFNPASSPRL--PLPADSEPDAYTSAPRGSGPT 123
S + P PA P +P PP Q + A+ P P P S P + ++ P P
Sbjct: 405 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 464
Query: 124 YCAG-----------AGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPES- 171
A A + A L S +S P PS S P P++
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 524
Query: 172 ---RAARQGLGGRSARARTRRGPHRTRRPEP-----GPHHTGARQAGPLP-------GTR 216
A + + T + P R P P GP T A GP P T
Sbjct: 525 PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 584
Query: 217 GRTRAAGTGSAARGPARHLRG---GSVAAAAAARCLGLSPPGRSRLFSPR----SSLARP 269
AG S+A LRG G AAA SPP + L + S P
Sbjct: 585 SGPDLAGHSSSATSTPEELRGYDSGPEGGAAA------SPPPDAELAACHPAAWSRGPAP 638
Query: 270 PLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGL 329
PL F A A P W ++ P S A + + G + L
Sbjct: 639 PLAFRGAPGAPLP---------WPPATGPGS------ADGLCTIYETEGPESATPAPGAL 683
Query: 330 DPGPAP 335
DPGP+P
Sbjct: 684 DPGPSP 689
Score = 32.0 bits (71), Expect = 0.87
Identities = 38/126 (30%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 236 RGGSVAAAAAARCLGL---SPPGRSRLFSPRSSLARPPLRFPPARPALS--PSARRRCRV 290
+ G+ A AAR GL PPG R P + LR A A+ P A R +
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPR---PPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 291 NWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYP-LTPAALRPGTSP 349
+A RA SRP ASG RA PGP P RPG
Sbjct: 66 G----GATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 121
Query: 350 HPGREV 355
G +
Sbjct: 122 QKGLRI 127
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 49.7 bits (117), Expect = 4e-06
Identities = 54/190 (28%), Positives = 65/190 (34%), Gaps = 14/190 (7%)
Query: 165 LGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGT 224
+ PG + LG A + G P P G R G RG +
Sbjct: 43 MAPGAARGRGKPALGAHGAGCSSMGGAP----PPTDPGRAGLRSWGAAGSARGSEGRPSS 98
Query: 225 GSAA--RGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSP 282
A R P+R R + A RC +P R R R PLR L P
Sbjct: 99 RQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGR----GRRPLRGRVLLRQLDP 154
Query: 283 SARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAA 342
R R + + Q S R P R R GL+ AR PGL P P +PA
Sbjct: 155 FTRPRFPLQFFQGCPQPSRCLGRLE---PRRWRGHGLQPGGARAPGLQVPAPPGPASPAP 211
Query: 343 LRPGTSPHPG 352
L P PH G
Sbjct: 212 L-PARQPHKG 220
>gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform a
[Homo sapiens]
Length = 745
Score = 49.3 bits (116), Expect = 5e-06
Identities = 68/271 (25%), Positives = 99/271 (36%), Gaps = 38/271 (14%)
Query: 72 SRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNS 131
S PSP+H P Q F+ + P +P ++Y S T A N
Sbjct: 353 SSAPSPSHKVQRSVSANPKQRRFSDQAGPAIPTS-----NSY------SKKTQSNNAENK 401
Query: 132 RAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGP 191
R A S+++VP LP R + P P + + ++ R+R P
Sbjct: 402 RPEEDRESGRKASSTAKVPASPLPGLERKKTT---PTPSTNSVLS-----TSTNRSRNSP 453
Query: 192 HRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGL 251
R + + +PG+R T +A +A P +H + S A+ + GL
Sbjct: 454 LLERASLGQASIQNGKDSLTMPGSRASTASASAAVSAARPRQHQKSMS-ASVHPNKASGL 512
Query: 252 SPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIP 311
PP S PR S A P P SPSA N SS + + R +
Sbjct: 513 -PPTESNCEVPRPSTA------PQRVPVASPSAH-------NISSSGGAPDRTNFPRGVS 558
Query: 312 SRPRASGLRARAARRPGLDPGPAPYPLTPAA 342
SR + R R D PY +TPA+
Sbjct: 559 SRSTFHAGQLRQVR----DQQNLPYGVTPAS 585
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 49.3 bits (116), Expect = 5e-06
Identities = 60/233 (25%), Positives = 78/233 (33%), Gaps = 38/233 (16%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSG 70
P AS +P P+ S +S +PP +A + P + P P S
Sbjct: 534 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS------------- 580
Query: 71 GSRGPSPAHPWTTPQPGPPHQ---PGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAG 127
P+ P P PGP P A +P P P P + S P +G + A
Sbjct: 581 ----PTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 636
Query: 128 AGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASC---GLGPGPESRAARQGLGGRSAR 184
+ G Y+S P P A+C GP A +G G
Sbjct: 637 STPEELRG----YDSGPEGGAAASP--PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 690
Query: 185 ARTRRGP---------HRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAA 228
GP + T PE GA GP PGT G AAG G+ A
Sbjct: 691 WPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGA 743
Score = 40.8 bits (94), Expect = 0.002
Identities = 65/264 (24%), Positives = 84/264 (31%), Gaps = 35/264 (13%)
Query: 11 PAASCTLTSP---LHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIG 67
P A L +P L P +A +PP +A P F PF P + +
Sbjct: 499 PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSAS--LPMSPLA 556
Query: 68 SSGGSRGPSPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPR-------GS 120
+ P A P P PP P P P PD S PR G
Sbjct: 557 TPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP-----GPDTSVSGPRLTLALAPGP 611
Query: 121 GPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGG 180
P ++ +G L ++S+ +S+ P + RG G G +
Sbjct: 612 PPPPSRSPSSTLSGPDLAGHSSSATST-------PEELRGYDSGPEGGAAASPPPDAELA 664
Query: 181 RSARARTRRGPH-------RTRRPEPGPHHTGARQAGPLPG---TRGRTRAA-GTGSAAR 229
A RGP P P P TG A L T G A G+
Sbjct: 665 ACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDP 724
Query: 230 GPARHLRGGSVAAAAAARCLGLSP 253
GP+ GG AA A A SP
Sbjct: 725 GPSPGTSGGKAAAGAGAGASSRSP 748
Score = 39.7 bits (91), Expect = 0.004
Identities = 94/374 (25%), Positives = 129/374 (34%), Gaps = 74/374 (19%)
Query: 18 TSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSP 77
+ P TPS A++ G LP P ++P P + + S + PSP
Sbjct: 165 SGPTPGTPSPAMARRSRAAGTEVGLPR-PAPSARPRPPTEGPRKSVSS-ASEHSTTEPSP 222
Query: 78 AHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGL 137
A G +P SS PL S+P SGP+ G RA
Sbjct: 223 AARRRPSAGGGLQRPASRSLSSSATPL----------SSPARSGPS---ARGTPRA---- 265
Query: 138 TKYNSAHSSSRVPR-------PRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRG 190
AH S P+ P++ R+ A+ LGP S A SA +++
Sbjct: 266 ----PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS---PSAALQSQAP 318
Query: 191 PHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGT-----GSAARGPARHLRGGSVAAAAA 245
P T P + A PLP A + A P++ A
Sbjct: 319 P--TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQA 376
Query: 246 ARCLGLSPPGRSRLFSPRS----SLARPPLRFPPARPAL---------SPSARRRCRVNW 292
SPP S L +P +LA PPL+ PP+ PA SP A V+
Sbjct: 377 THSFLPSPP-LSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL 435
Query: 293 NQS--SRPASHNAQRAARHIPSRPRASGLRARAARRPGLDP-------------GPAPYP 337
Q+ S P S Q P P AS + +A P P PA P
Sbjct: 436 LQAPFSPPPSPPVQ-----APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP 490
Query: 338 LTPAALRPGTSPHP 351
++P+A P +P P
Sbjct: 491 MSPSATPPPQAPPP 504
Score = 34.7 bits (78), Expect = 0.13
Identities = 51/192 (26%), Positives = 63/192 (32%), Gaps = 31/192 (16%)
Query: 180 GRSARARTRRGPHR-TRRPEPGPHHTGARQAGPLPGTRGRTRAAGTGSAARGPARHLRGG 238
G +AR R P T RP P P P T R G A R G
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRP-------PPPVTPAALRVLGAAGAVGRKPLAERAG 63
Query: 239 SVAAAAAARCLGLSPPGRSRLFSPRSSLARPPL-----RFPPAR-----PALSPSARRRC 288
+ A + P RS S R+ +RPP R PPA+ P SP
Sbjct: 64 GIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA--- 120
Query: 289 RVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG-----PAPYPLTPAAL 343
+ ++RP Q+ R A G A +R L G P P TP+
Sbjct: 121 ----SGTTRPGP-LGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 175
Query: 344 RPGTSPHPGREV 355
S G EV
Sbjct: 176 MARRSRAAGTEV 187
Score = 34.7 bits (78), Expect = 0.13
Identities = 86/341 (25%), Positives = 110/341 (32%), Gaps = 60/341 (17%)
Query: 55 PQSKQKADTETIGSSGGSRGPS-------PAHP----------WTTPQPGPPHQ---PGF 94
P S+ + + T SS GPS PAHP PQ PP + P
Sbjct: 237 PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Query: 95 NPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVPRPRL 154
P SS L P+ S + AP PT A +S LT + P P
Sbjct: 297 GPLSSSPLATPSPSAA-LQSQAP----PTLPATPHSS----SLTCQLATPLPLAPPSPSA 347
Query: 155 PSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGAR-----QA 209
P + P G A P + P P A QA
Sbjct: 348 PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA 407
Query: 210 GPLPGTRGRTRAAGTGS--AARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRS--- 264
P P T S A A HL + + P S SP +
Sbjct: 408 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 467
Query: 265 -----SLARPPLRFPPARPA---LSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRA 316
SLA PPL+ PP+ PA +SPSA Q+ P + + A+ P P A
Sbjct: 468 SQAPPSLAAPPLQVPPSPPASPPMSPSATPP-----PQAPPPLAAPPLQLAKPPPQAPPA 522
Query: 317 SGLRARAA--RRPGLDPGPAPY------PLTPAALRPGTSP 349
A P PG AP+ P++P A P +P
Sbjct: 523 LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 563
Score = 34.7 bits (78), Expect = 0.13
Identities = 92/366 (25%), Positives = 119/366 (32%), Gaps = 62/366 (16%)
Query: 11 PAASCTLTSPLHPTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSG 70
P S T P P+ AL +PP S P P P P + + S
Sbjct: 384 PPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 443
Query: 71 GS---RGP--SPAHPWTTPQPGPPHQPGFNPASSPRL--PLPADSEPDAYTSAPRGSGPT 123
S + P PA P +P PP Q + A+ P P P S P + ++ P P
Sbjct: 444 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 503
Query: 124 YCAG-----------AGNSRAGGGLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPES- 171
A A + A L S +S P PS S P P++
Sbjct: 504 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 563
Query: 172 ---RAARQGLGGRSARARTRRGPHRTRRPEP-----GPHHTGARQAGPLP-------GTR 216
A + + T + P R P P GP T A GP P T
Sbjct: 564 PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 623
Query: 217 GRTRAAGTGSAARGPARHLRG---GSVAAAAAARCLGLSPPGRSRLFSPR----SSLARP 269
AG S+A LRG G AAA SPP + L + S P
Sbjct: 624 SGPDLAGHSSSATSTPEELRGYDSGPEGGAAA------SPPPDAELAACHPAAWSRGPAP 677
Query: 270 PLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGL 329
PL F A A P W ++ P S A + + G + L
Sbjct: 678 PLAFRGAPGAPLP---------WPPATGPGS------ADGLCTIYETEGPESATPAPGAL 722
Query: 330 DPGPAP 335
DPGP+P
Sbjct: 723 DPGPSP 728
Score = 32.0 bits (71), Expect = 0.87
Identities = 38/131 (29%), Positives = 49/131 (37%), Gaps = 14/131 (10%)
Query: 236 RGGSVAAAAAARCLGL---SPPGRSRLFSPRSSLARPPLRFPPARPALS--PSARRRCRV 290
+ G+ A AAR GL PPG R P + LR A A+ P A R +
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPR---PPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 291 NWNQSSRPA-----SHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYP-LTPAALR 344
A + +A ++R+ SRP ASG RA PGP P R
Sbjct: 66 GGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTR 125
Query: 345 PGTSPHPGREV 355
PG G +
Sbjct: 126 PGPLGQKGLRI 136
>gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I
subunit isoform b [Homo sapiens]
Length = 2188
Score = 49.3 bits (116), Expect = 5e-06
Identities = 94/364 (25%), Positives = 121/364 (33%), Gaps = 95/364 (26%)
Query: 23 PTPSEALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWT 82
P S A+S P P + E+PF + +L +A PSP P
Sbjct: 1873 PLSSTAVS--PDPENFLCEMEEIPFNPVRSWLKHDSSQAP------------PSPFSP-- 1916
Query: 83 TPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGLTKYNS 142
ASSP LP+PA+ A +++ + GP G G L K
Sbjct: 1917 -------------DASSPLLPMPAEFFHPAVSASQK--GPEKGTGTGT------LPKIAL 1955
Query: 143 AHSSSRVPRPR----LPSQRRGASCGLGPGPESRAA--RQGLGGRSARARTRRGPHRTRR 196
S + + PR L Q G+ L P S A + L + + R
Sbjct: 1956 QGSWASLRSPRVNCTLLRQATGSDTSLDASPSSSAGSLQTTLEDSLTLSDSPRRALGPPA 2015
Query: 197 PEPGPHHTGARQAGPLPGTRGRTRAAGTG-SAARGPARHLRGGSVAAAAAARCL------ 249
P PGP +AG P R R G G + RG H R S + + C
Sbjct: 2016 PAPGP------RAGLSPAARRRLSLRGRGLFSLRGLRAHQRSHSSGGSTSPGCTHHDSMD 2069
Query: 250 -----GLSPPGRSRLFSPRS---------SLARPPLRFPPARPALSPSARRRCRVNWNQS 295
G G S S SL PP PP P L+P
Sbjct: 2070 PSDEEGRGGAGGGGAGSEHSETLSSLSLTSLFCPPP--PPPAPGLTP------------- 2114
Query: 296 SRPASHNAQRAARHIPSRPRASGLRARAARRPGL-------DPGPAPYPLTPAALRPGTS 348
+R S + AA P RP A+ L AR P PG AP P+ L P
Sbjct: 2115 ARKFSSTSSLAA---PGRPHAAALAHGLARSPSWAADRSKDPPGRAPLPMGLGPLAPPPQ 2171
Query: 349 PHPG 352
P PG
Sbjct: 2172 PLPG 2175
Score = 30.0 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 28 ALSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSPAHPWTTPQPG 87
+L C P PP P F + + A + G +R PS A + PG
Sbjct: 2099 SLFCPPPPPPAPGLTPARKFSSTSSLAAPGRPHAAAL---AHGLARSPSWAADRSKDPPG 2155
Query: 88 PPHQP-GFNPASSPRLPLPADSEP 110
P G P + P PLP + EP
Sbjct: 2156 RAPLPMGLGPLAPPPQPLPGELEP 2179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,273,455
Number of Sequences: 37866
Number of extensions: 1504772
Number of successful extensions: 14362
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 1754
Number of HSP's that attempted gapping in prelim test: 9244
Number of HSP's gapped (non-prelim): 5636
length of query: 355
length of database: 18,247,518
effective HSP length: 103
effective length of query: 252
effective length of database: 14,347,320
effective search space: 3615524640
effective search space used: 3615524640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.