Guide to the Human Genome
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Search of human proteins with 239753986

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753986 PREDICTED: similar to hCG1989907 [Homo sapiens]
         (229 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753986 PREDICTED: similar to hCG1989907 [Homo sapiens]          465   e-131
gi|239748521 PREDICTED: hypothetical protein XP_002346713 [Homo ...   464   e-131
gi|239742492 PREDICTED: hypothetical protein XP_002342529 [Homo ...   464   e-131
gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo ...    40   0.002
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]        37   0.011
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]         37   0.011
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ...    37   0.014
gi|28875797 small protein rich in arginine and glycine [Homo sap...    37   0.018
gi|110611170 ADAM metallopeptidase with thrombospondin type 1 mo...    36   0.024
gi|4506321 protein tyrosine phosphatase, receptor type, N precur...    36   0.024
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ...    35   0.041
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ...    35   0.041
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ...    35   0.041
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]            35   0.041
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ...    35   0.053
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             35   0.053
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]               35   0.053
gi|157743247 F-box protein 45 [Homo sapiens]                           35   0.053
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]            34   0.091
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]            34   0.091
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]            34   0.091
gi|6912372 forkhead box D3 [Homo sapiens]                              34   0.091
gi|13994190 frizzled 8 [Homo sapiens]                                  34   0.091
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]            34   0.12 
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]      33   0.16 
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]            33   0.20 
gi|194018511 keratin 77 [Homo sapiens]                                 33   0.26 
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            33   0.26 
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]            33   0.26 
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]            33   0.26 

>gi|239753986 PREDICTED: similar to hCG1989907 [Homo sapiens]
          Length = 229

 Score =  465 bits (1197), Expect = e-131
 Identities = 229/229 (100%), Positives = 229/229 (100%)

Query: 1   MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
           MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS
Sbjct: 1   MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60

Query: 61  PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
           PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA
Sbjct: 61  PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120

Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
           RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR
Sbjct: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180

Query: 181 HLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
           HLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL
Sbjct: 181 HLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229


>gi|239748521 PREDICTED: hypothetical protein XP_002346713 [Homo
           sapiens]
          Length = 229

 Score =  464 bits (1193), Expect = e-131
 Identities = 228/229 (99%), Positives = 228/229 (99%)

Query: 1   MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
           MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS
Sbjct: 1   MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60

Query: 61  PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
           PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA
Sbjct: 61  PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120

Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
           RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR
Sbjct: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180

Query: 181 HLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
           HLQLCFQ GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL
Sbjct: 181 HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229


>gi|239742492 PREDICTED: hypothetical protein XP_002342529 [Homo
           sapiens]
          Length = 229

 Score =  464 bits (1193), Expect = e-131
 Identities = 228/229 (99%), Positives = 228/229 (99%)

Query: 1   MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
           MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS
Sbjct: 1   MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60

Query: 61  PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
           PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA
Sbjct: 61  PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120

Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
           RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR
Sbjct: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180

Query: 181 HLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
           HLQLCFQ GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL
Sbjct: 181 HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229


>gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo
           sapiens]
          Length = 522

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 57  PVCSPWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQP---G 113
           PVC+ W C R +V   L P+       +    +RP+  +  + +  +    LP  P    
Sbjct: 329 PVCTRWCCRRLEVCAKLLPQTPQAWGLSPVKARRPVCTRWWMASREERLKALPHSPHCLS 388

Query: 114 YRGRRPARGLLHL 126
            RGR P RGL H+
Sbjct: 389 LRGRAPGRGLFHV 401


>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
          Length = 217

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLG 227
           G G G R G  G G R GRGGGGG  R G R  G R  G
Sbjct: 179 GRGGGGRGGGRGGGFRGGRGGGGGGFR-GGRGGGFRGRG 216



 Score = 30.8 bits (68), Expect = 1.0
 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 192 PGARAGAPGCGCRRGRGGG-GGRSRSGARTAGHR 224
           P    G P  G R GRGGG GG  R G R  G R
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFR 194



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/36 (44%), Positives = 16/36 (44%)

Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHR 224
           G G G R G  G G R G  GGG R   G    G R
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFR 205


>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
          Length = 217

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLG 227
           G G G R G  G G R GRGGGGG  R G R  G R  G
Sbjct: 179 GRGGGGRGGGRGGGFRGGRGGGGGGFR-GGRGGGFRGRG 216



 Score = 30.8 bits (68), Expect = 1.0
 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 192 PGARAGAPGCGCRRGRGGG-GGRSRSGARTAGHR 224
           P    G P  G R GRGGG GG  R G R  G R
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFR 194



 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/36 (44%), Positives = 16/36 (44%)

Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHR 224
           G G G R G  G G R G  GGG R   G    G R
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFR 205


>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
           sapiens]
          Length = 944

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 116 GRRPARGL-LHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVL 174
           GRR   G  L LQ + L   S L  +  +  L  G     RR++ L   GR R    G  
Sbjct: 650 GRRIGPGARLVLQEQLLAAESLLAAIAAVHQLHRGLR---RRQKELRHHGRGRGRRGG-- 704

Query: 175 RRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
           RR RA  L++  Q G      AG PG G R GRGGG        R    +++G +
Sbjct: 705 RRGRAVGLEVPLQVGVAHEDLAGLPGLGGR-GRGGGTRGGGGAVRALVQQQVGGV 758


>gi|28875797 small protein rich in arginine and glycine [Homo
           sapiens]
          Length = 248

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 51/167 (30%), Positives = 66/167 (39%), Gaps = 36/167 (21%)

Query: 65  VRRKVAVSLSPEQQVGSDEAEQAPQRPLPA--QQLVGAAAQP--QHRLPEQPGYRGRRPA 120
           V+  + +  S +Q++G    +    RP+ A  +  +G    P  Q  LP + G RG R  
Sbjct: 65  VQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIIQRGLP-RGGLRGGRAT 123

Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
           R LL                           G   R + LL GGR+ A  +G LRR   R
Sbjct: 124 RTLLRG-------------------------GMSLRGQNLLRGGRAVAPRMG-LRRGGVR 157

Query: 181 HLQLCFQAGTGPGA--RAGAPGCG---CRRGRGGGGGRSRSGARTAG 222
                 + G G GA  R G  G G     RGRGG GGR R   R  G
Sbjct: 158 GRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRGRGRGRGRG 204


>gi|110611170 ADAM metallopeptidase with thrombospondin type 1
           motif, 17 preproprotein [Homo sapiens]
          Length = 1095

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 37/105 (35%), Positives = 40/105 (38%), Gaps = 8/105 (7%)

Query: 108 LPEQPGYRGRRPARGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSR 167
           LP  PG R RR  R      P A R     R LLL LP  G  L    RR    L     
Sbjct: 53  LPAAPGPRRRRRPR----TPPAAPRARPGERALLLHLPAFGRDLYLQLRRDLRFLSRGFE 108

Query: 168 ASLLGVLRRRRARHLQLCFQAGT---GPGARAGAPGCGCRRGRGG 209
               G  RRR  R  +LCF +G     PG+      CG   G  G
Sbjct: 109 VEEAGAARRR-GRPAELCFYSGRVLGHPGSLVSLSACGAAGGLVG 152


>gi|4506321 protein tyrosine phosphatase, receptor type, N precursor
           [Homo sapiens]
          Length = 979

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 73  LSPEQQVGSDEAEQAPQRPLPAQQLV------GAAAQPQHRLPEQP-GYRGRRPARGLLH 125
           L P +    D +  AP+RP PA +L+      G+A   QHRLP+ P G  G   +  L  
Sbjct: 116 LRPPEPRPRDRSGLAPKRPGPAGELLLQDIPTGSAPAAQHRLPQPPVGKGGAGASSSLSP 175

Query: 126 LQPRALRRPSFLRFLLL 142
           LQ   L  P  L  LLL
Sbjct: 176 LQAELL--PPLLEHLLL 190


>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
           sapiens]
          Length = 334

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALRRPSFLRFLLLLLPLCGGCL--GRWRRRR 158
           P+   P +   RGRR A GL+   HL     R        L+ +PL    L  GR     
Sbjct: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPST 187

Query: 159 RLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSR--- 215
           R       +A+LLG   R        C       GA AGA G    +GRG   G  R   
Sbjct: 188 RACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERPPH 243

Query: 216 -SGARTAGHRRLGA 228
             G R A    +GA
Sbjct: 244 VQGRRPAPRGAVGA 257


>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
           sapiens]
          Length = 286

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 29/68 (42%), Positives = 30/68 (44%), Gaps = 14/68 (20%)

Query: 163 GGRSRASLLGVLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGART-A 221
           GG + A  LG  R            AG G G   G  G G RRGRGGG    R G R  A
Sbjct: 160 GGGAEAQFLGGGRS----------SAGGGGGGGGGGGGRGSRRGRGGG---ERGGPRAQA 206

Query: 222 GHRRLGAL 229
             RRL AL
Sbjct: 207 VRRRLSAL 214


>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
           sapiens]
          Length = 329

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALRRPSFLRFLLLLLPLCGGCL--GRWRRRR 158
           P+   P +   RGRR A GL+   HL     R        L+ +PL    L  GR     
Sbjct: 123 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPST 182

Query: 159 RLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSR--- 215
           R       +A+LLG   R        C       GA AGA G    +GRG   G  R   
Sbjct: 183 RACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERPPH 238

Query: 216 -SGARTAGHRRLGA 228
             G R A    +GA
Sbjct: 239 VQGRRPAPRGAVGA 252


>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALRRPSFLRFLLLLLPLCGGCL--GRWRRRR 158
           P+   P +   RGRR A GL+   HL     R        L+ +PL    L  GR     
Sbjct: 123 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPST 182

Query: 159 RLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSR--- 215
           R       +A+LLG   R        C       GA AGA G    +GRG   G  R   
Sbjct: 183 RACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERPPH 238

Query: 216 -SGARTAGHRRLGA 228
             G R A    +GA
Sbjct: 239 VQGRRPAPRGAVGA 252


>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
           sapiens]
          Length = 284

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 23/43 (53%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 188 AGTGPGARAGAPGCGCRRGRGGGGGRSRSGART-AGHRRLGAL 229
           AG G G   G  G G RRGRGGG    R G R  A  RRL AL
Sbjct: 173 AGGGGGGGGGGGGRGSRRGRGGG---ERGGPRAQAVRRRLSAL 212



 Score = 30.8 bits (68), Expect = 1.0
 Identities = 16/35 (45%), Positives = 16/35 (45%)

Query: 191 GPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRR 225
           GPGA  GA   G  R   GGGG    G    G RR
Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRR 190


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 12/79 (15%)

Query: 149 GCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR------------HLQLCFQAGTGPGARA 196
           G  GR RRRRR     RS AS      RRR R              +    +G+G GA  
Sbjct: 381 GGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPG 440

Query: 197 GAPGCGCRRGRGGGGGRSR 215
             P  G  RG GG G R++
Sbjct: 441 PGPEPGSERGHGGHGKRAK 459


>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
          Length = 540

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 191 GPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
           GPG RAG  G   +    GGGG  RS A TAG R + AL
Sbjct: 2   GPGERAGGGGDAGKGNAAGGGGGGRS-ATTAGSRAVSAL 39


>gi|157743247 F-box protein 45 [Homo sapiens]
          Length = 286

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 18/37 (48%), Positives = 19/37 (51%)

Query: 188 AGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHR 224
           A   PGA A + G GC  G  G G  S SGA  AG R
Sbjct: 2   AAPAPGAGAASGGAGCSGGGAGAGAGSGSGAAGAGGR 38


>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 173 VLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGA 228
           V+  + AR LQ    +  G G  A  PG G     GGGGG   SG R+A  RR GA
Sbjct: 2   VVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSA-QRRAGA 56


>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 173 VLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGA 228
           V+  + AR LQ    +  G G  A  PG G     GGGGG   SG R+A  RR GA
Sbjct: 2   VVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSA-QRRAGA 56


>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 173 VLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGA 228
           V+  + AR LQ    +  G G  A  PG G     GGGGG   SG R+A  RR GA
Sbjct: 2   VVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSA-QRRAGA 56


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 188 AGTGPGARAGAPGC-GCRRGRGGGGGRSRSGARTAGHRRLGAL 229
           AG GPG   GAP   GC+ G GG  G +  G   AG    G L
Sbjct: 88  AGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAGGL 130


>gi|13994190 frizzled 8 [Homo sapiens]
          Length = 694

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 17/132 (12%)

Query: 92  LPAQQLVGAAAQPQHRLPEQPGYRGRRPARGLLHLQPRALRRPSFLRFLL--LLLPLCGG 149
           +PA  +V      QH    +P +        L  LQP   RRP +  F+L   +  + G 
Sbjct: 542 VPAAVVVACLFYEQHN---RPRWEATHNCPCLRDLQPDQARRPDYAVFMLKYFMCLVVGI 598

Query: 150 CLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGARA----GAPGCGCRR 205
             G W    + L   RS  +      +  A         G G GA A    G PG G   
Sbjct: 599 TSGVWVWSGKTLESWRSLCTRCCWASKGAA--------VGGGAGATAAGGGGGPGGGGGG 650

Query: 206 GRGGGGGRSRSG 217
           G GGGGG    G
Sbjct: 651 GPGGGGGPGGGG 662


>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 334

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 43/136 (31%), Positives = 51/136 (37%), Gaps = 17/136 (12%)

Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALR----RPSFLRFLLLLLPLCGGCLGRWRR 156
           P+   P +   RGRR A GL+   HL     R    RP  L  + L  PL     GR   
Sbjct: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLL--LEGRSEP 185

Query: 157 RRRLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSR- 215
             R       +A+LLG   R        C       GA AGA G    +GRG   G  R 
Sbjct: 186 STRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERP 241

Query: 216 ---SGARTAGHRRLGA 228
               G R A    +GA
Sbjct: 242 PHVQGRRPAPRGAVGA 257


>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
          Length = 453

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 17/36 (47%), Positives = 20/36 (55%)

Query: 187 QAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAG 222
           + GT  G R  AP   C  GRGGG   +RSG+R  G
Sbjct: 128 RVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGG 163


>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 15/126 (11%)

Query: 89  QRPLPAQQLVGAAAQPQHRLP------EQPGYRGRRPARGLLHLQPRALRRPSFLR---- 138
           QR   A++++     P+ RLP      E PG+   R   GL    P+  R  S+ R    
Sbjct: 244 QRAAGAERVLNNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCRE 303

Query: 139 ----FLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGA 194
                +L L       L R   RRR   GG +    + +  R R   L+     GT   A
Sbjct: 304 QGHPAVLALQSPAPPSLARAAARRRGP-GGATEPGFVTLAFRSRLPLLRSPGPEGTSDAA 362

Query: 195 RAGAPG 200
           RA APG
Sbjct: 363 RAPAPG 368


>gi|194018511 keratin 77 [Homo sapiens]
          Length = 578

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 158 RRLLLGGRSRASLLGVLRRR---RARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRS 214
           R+LL G  SR S  G L+       ++ Q+    G G G   G+ G G   G G GGGRS
Sbjct: 467 RQLLEGEESRMS--GELQSHVSISVQNSQVSVNGGAGGGGSYGSGGYGGGSGGGYGGGRS 524

Query: 215 RSGARTAG 222
             G    G
Sbjct: 525 YRGGGARG 532



 Score = 28.5 bits (62), Expect = 5.0
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 186 FQAGTGPGARAGAPGCGCRRGRGGGGGRSRSG 217
           ++ G   G   G  G GC  G G  GG  RSG
Sbjct: 525 YRGGGARGRSGGGYGSGCGGGGGSYGGSGRSG 556


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 155 RRRRRLLLGGRSRASLLGVLR-RRRARHLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGR 213
           RRRR    G   + + +G+   +RR +  +L    G   G  A + G G  + RG GG +
Sbjct: 690 RRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRG---GGGAKSRGSGGAKSRGSGGAK 746

Query: 214 SRSGARTAGHRRLG 227
           SRSG + A  +  G
Sbjct: 747 SRSGKKAAASKSHG 760


>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 15/126 (11%)

Query: 89  QRPLPAQQLVGAAAQPQHRLP------EQPGYRGRRPARGLLHLQPRALRRPSFLR---- 138
           QR   A++++     P+ RLP      E PG+   R   GL    P+  R  S+ R    
Sbjct: 244 QRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCRE 303

Query: 139 ----FLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGA 194
                +L L       L R   RRR   GG +    + +  R R   L+     GT   A
Sbjct: 304 QGHPAVLALQSPAPPSLARAAARRRGP-GGATEPGFVTLAFRSRLPLLRSPGPEGTSDAA 362

Query: 195 RAGAPG 200
           RA APG
Sbjct: 363 RAPAPG 368


>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 15/126 (11%)

Query: 89  QRPLPAQQLVGAAAQPQHRLP------EQPGYRGRRPARGLLHLQPRALRRPSFLR---- 138
           QR   A++++     P+ RLP      E PG+   R   GL    P+  R  S+ R    
Sbjct: 244 QRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCRE 303

Query: 139 ----FLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQAGTGPGA 194
                +L L       L R   RRR   GG +    + +  R R   L+     GT   A
Sbjct: 304 QGHPAVLALQSPAPPSLARAAARRRGP-GGATEPGFVTLAFRSRLPLLRSPGPEGTSDAA 362

Query: 195 RAGAPG 200
           RA APG
Sbjct: 363 RAPAPG 368


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.140    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,087,511
Number of Sequences: 37866
Number of extensions: 552354
Number of successful extensions: 6427
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 5652
Number of HSP's gapped (non-prelim): 772
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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