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Search of human proteins with 239753673
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
(380 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 788 0.0
gi|239748304 PREDICTED: hypothetical protein XP_002346608 [Homo ... 402 e-112
gi|239742202 PREDICTED: hypothetical protein XP_002342450 [Homo ... 345 5e-95
gi|157785645 SPEG complex locus [Homo sapiens] 49 6e-06
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 46 6e-05
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|156416026 zinc finger protein 219 [Homo sapiens] 44 2e-04
gi|156415998 zinc finger protein 219 [Homo sapiens] 44 2e-04
gi|156415996 zinc finger protein 219 [Homo sapiens] 44 2e-04
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 43 4e-04
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ... 43 4e-04
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 43 4e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 43 4e-04
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 43 5e-04
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 43 5e-04
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 43 5e-04
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 43 5e-04
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 42 7e-04
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ... 42 7e-04
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 42 7e-04
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 42 7e-04
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ... 42 7e-04
gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo... 42 0.001
>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 380
Score = 788 bits (2034), Expect = 0.0
Identities = 380/380 (100%), Positives = 380/380 (100%)
Query: 1 MPCSRPAPRQWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD 60
MPCSRPAPRQWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD
Sbjct: 1 MPCSRPAPRQWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD 60
Query: 61 PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR 120
PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR
Sbjct: 61 PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR 120
Query: 121 GRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGAR 180
GRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGAR
Sbjct: 121 GRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGAR 180
Query: 181 RPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLEL 240
RPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLEL
Sbjct: 181 RPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLEL 240
Query: 241 EGARMGERLHRRQGAPETACIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVAAG 300
EGARMGERLHRRQGAPETACIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVAAG
Sbjct: 241 EGARMGERLHRRQGAPETACIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVAAG 300
Query: 301 SSPPAGRFSMWPRDAQRLLHLCQAAPHGLRGHRGRCSNEGVREDSGPCFPENTCFSQPVS 360
SSPPAGRFSMWPRDAQRLLHLCQAAPHGLRGHRGRCSNEGVREDSGPCFPENTCFSQPVS
Sbjct: 301 SSPPAGRFSMWPRDAQRLLHLCQAAPHGLRGHRGRCSNEGVREDSGPCFPENTCFSQPVS 360
Query: 361 RRLFAFRMLVYICDNQSTFH 380
RRLFAFRMLVYICDNQSTFH
Sbjct: 361 RRLFAFRMLVYICDNQSTFH 380
>gi|239748304 PREDICTED: hypothetical protein XP_002346608 [Homo
sapiens]
Length = 285
Score = 402 bits (1033), Expect = e-112
Identities = 198/198 (100%), Positives = 198/198 (100%)
Query: 1 MPCSRPAPRQWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD 60
MPCSRPAPRQWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD
Sbjct: 1 MPCSRPAPRQWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD 60
Query: 61 PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR 120
PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR
Sbjct: 61 PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR 120
Query: 121 GRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGAR 180
GRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGAR
Sbjct: 121 GRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGAR 180
Query: 181 RPAPGARRSRPRLLRPAS 198
RPAPGARRSRPRLLRPAS
Sbjct: 181 RPAPGARRSRPRLLRPAS 198
Score = 32.3 bits (72), Expect = 0.73
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 24/96 (25%)
Query: 182 PAPGARRSRPRL---LRPASPPPRPAPRRRSTAPRHEG----------------GRPGRG 222
PA RR R L PA+ PR APRRR P G G PG
Sbjct: 61 PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPG-A 119
Query: 223 RTRRQPHLAGAGCARL---ELEGARMGERLHRRQGA 255
R R P GA ARL E+ A ER HR GA
Sbjct: 120 RGRLAPARGGAARARLLAVEVRVAVQSER-HRHVGA 154
>gi|239742202 PREDICTED: hypothetical protein XP_002342450 [Homo
sapiens]
Length = 272
Score = 345 bits (884), Expect = 5e-95
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 29 ASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAARPRSAPR 88
ASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAARPRSAPR
Sbjct: 16 ASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAARPRSAPR 75
Query: 89 RRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSER 148
RRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSER
Sbjct: 76 RRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSER 135
Query: 149 HRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPAS 198
HRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPAS
Sbjct: 136 HRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPAS 185
Score = 32.3 bits (72), Expect = 0.73
Identities = 36/96 (37%), Positives = 38/96 (39%), Gaps = 24/96 (25%)
Query: 182 PAPGARRSRPRL---LRPASPPPRPAPRRRSTAPRHEG----------------GRPGRG 222
PA RR R L PA+ PR APRRR P G G PG
Sbjct: 48 PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPG-A 106
Query: 223 RTRRQPHLAGAGCARL---ELEGARMGERLHRRQGA 255
R R P GA ARL E+ A ER HR GA
Sbjct: 107 RGRLAPARGGAARARLLAVEVRVAVQSER-HRHVGA 141
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 49.3 bits (116), Expect = 6e-06
Identities = 71/246 (28%), Positives = 93/246 (37%), Gaps = 36/246 (14%)
Query: 60 DPAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGA 119
+PA RG LR G + +A PR+ PR GRG + L +R P+ PGA
Sbjct: 1998 EPAAGASPRRGELRRGSSAESALPRAGPREL-----GRGLHKAASVELPQRRSPS--PGA 2050
Query: 120 RGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGA 179
RL ARGG E +Q+ R R L P + GP S G
Sbjct: 2051 T-RL--ARGGLGEG-----EYAQRLQALRQR-----LLRGGPEDGKVSGLRGPLLESLGG 2097
Query: 180 RRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLE 239
R P R+ P PP + ++ +G RGR RR AG A LE
Sbjct: 2098 RARDPRMARAASSEAAPHHQPPLENRGLQKSSSFSQGEAEPRGRHRR----AG---APLE 2150
Query: 240 LEGARMGERLHRRQGAPETACIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVAA 299
+ AR+G R R Q +P +S A +P P + P AE +
Sbjct: 2151 IPVARLGAR--RLQESP-------SLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSD 2201
Query: 300 GSSPPA 305
PPA
Sbjct: 2202 APQPPA 2207
Score = 32.7 bits (73), Expect = 0.56
Identities = 39/142 (27%), Positives = 49/142 (34%), Gaps = 32/142 (22%)
Query: 108 SERHVPAGIPGARGRLAPARGGAARARLL-------------------AVEVRVAVQSER 148
SER P G PGA A G A R L +E+R A + R
Sbjct: 441 SERGAPWGTPGASQEELRAPGSVAERRRLFQQKAASLDERTRQRSPASDLELRFAQELGR 500
Query: 149 -HRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASP----PPRP 203
R +LV + P PG P +R S P+ R SP PP P
Sbjct: 501 IRRSTSREELVRSHESLRATLQRAPSPREPG--EPPLFSRPSTPKTSRAVSPAAAQPPSP 558
Query: 204 APRRRSTAPRHEGGRPGRGRTR 225
+ + G PGR R+R
Sbjct: 559 SSAEK------PGDEPGRPRSR 574
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 47.4 bits (111), Expect = 2e-05
Identities = 54/169 (31%), Positives = 69/169 (40%), Gaps = 21/169 (12%)
Query: 93 GPGGRGPQAEVPLVLSERHVPAGIPGARGRLA--PARGGAARARLLAVEVRVAVQSERHR 150
GP GR P +PL AG+ G PA G ARA A R Q++R
Sbjct: 264 GPPGRLPDP-IPLPTRAPRTSAGLAGVGSGAPGEPAEPGRARAPRSAPSSREPRQTKRR- 321
Query: 151 HVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLL------RPASPPPRPA 204
V + +A A TGP P A + A G+ S PR L R A P P
Sbjct: 322 -------VGSRARAGAGAVTGP---CPAAAQGARGSWPS-PRCLPSDGGAREAPPTSAPH 370
Query: 205 PRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGARMGERLHRRQ 253
PRR + +P R GR Q + G A+L L G+R HR++
Sbjct: 371 PRRPAGSPPALADREGRRSLVPQTSIQGQNFAQLSLARPWAGKRGHRQR 419
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 45.8 bits (107), Expect = 6e-05
Identities = 74/258 (28%), Positives = 85/258 (32%), Gaps = 65/258 (25%)
Query: 56 GQHV---DPAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHV 112
G HV PAGA G AA P A R R PGG GPQ P V
Sbjct: 59 GNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRAR---PGGGGPQRPGPPSPRRPLV 115
Query: 113 PAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGP 172
PAG +L P G+A + P P AA AA GP
Sbjct: 116 PAGPAPPAAKLRPPPEGSAGS-----------------------CAPVPAAAAVAA--GP 150
Query: 173 RHASPGARRPA-PGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLA 231
A G +PA P A +R A P P P P G PG G+ A
Sbjct: 151 EPAPAGPAKPAGPAALAAR------AGPGPGPGPG--------PGPGPGPGKP------A 190
Query: 232 GAGCARLELEGARMGERLHRRQGAPETACIHLQVSISKNASELNPKFPQCH----LINGP 287
G G A+ A + H A VS+ N P+ +I P
Sbjct: 191 GPGAAQTLNGSAALLNSHHAAAPA---------VSLVNNGPAALLPLPKPAAPGTVIQTP 241
Query: 288 GFAEAKGPMVAAGSSPPA 305
F A P A SPPA
Sbjct: 242 PFVGAAAPPAPAAPSPPA 259
Score = 41.2 bits (95), Expect = 0.002
Identities = 68/243 (27%), Positives = 80/243 (32%), Gaps = 58/243 (23%)
Query: 18 SPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFA 77
SP +A A + PG P P G R R G P R R + G A
Sbjct: 66 SPAGAAGAGPAAPAEGAPGAAPEPPPAG----RARPGGGGPQRPGPPSPR-RPLVPAGPA 120
Query: 78 PAAARPRSAPRRRILG---------------PGGRGPQAEV-PLVLSERHVPAGIPG--- 118
P AA+ R P P GP P L+ R P PG
Sbjct: 121 PPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGP 180
Query: 119 --ARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLV--------PAPRQAAQ-- 166
G PA GAA+ + A+ + H AV LV P P+ AA
Sbjct: 181 GPGPGPGKPAGPGAAQT----LNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGT 236
Query: 167 ----------AADTGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEG 216
AA P SP A PAP A + P PPP PAP + P H
Sbjct: 237 VIQTPPFVGAAAPPAPAAPSPPAA-PAPAAPAAAP-------PPPPPAPATLARPPGHPA 288
Query: 217 GRP 219
G P
Sbjct: 289 GPP 291
Score = 40.4 bits (93), Expect = 0.003
Identities = 48/169 (28%), Positives = 56/169 (33%), Gaps = 27/169 (15%)
Query: 139 EVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPAS 198
EVR A HV + +P AA A P +PGA P A R+RP P
Sbjct: 49 EVRAAAAGALGNHV----VSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQR 104
Query: 199 PPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGARMGERLHRRQGAPET 258
P P P+PRR G P + R P + CA + A PE
Sbjct: 105 PGP-PSPRRPLVP---AGPAPPAAKLRPPPEGSAGSCAPVPAAAA--------VAAGPEP 152
Query: 259 ACIHLQVSISKNASELNPKFPQCHLIN-GPGFAEAKGPMVAAGSSPPAG 306
A A P P GPG GP G PAG
Sbjct: 153 A----------PAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAG 191
Score = 35.0 bits (79), Expect = 0.11
Identities = 68/248 (27%), Positives = 84/248 (33%), Gaps = 53/248 (21%)
Query: 6 PAPRQWVLRPLP-------SPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQH 58
PAP LRP P +PV +AA V+ A + P P P +R G
Sbjct: 119 PAPPAAKLRPPPEGSAGSCAPVPAAAAVA-AGPEPAPAGPAKPAGPAALAARAGPGPGPG 177
Query: 59 VDPA---GAGRRWRGG----LRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERH 111
P G G+ G L G A + +AP ++ GP A +PL
Sbjct: 178 PGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVN---NGPAALLPLPK---- 230
Query: 112 VPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTG 171
PA PG + P G AA A A PAP AA AA
Sbjct: 231 -PAA-PGTVIQTPPFVGAAAPPAPAAPSPPAA---------------PAP--AAPAAAPP 271
Query: 172 PRHASPGARRPAPGARRSRPRLLRPASPPPR-----------PAPRRRSTAPRHEGGRPG 220
P +P PG + P PA PPP PAP + P G+PG
Sbjct: 272 PPPPAPATLARPPG-HPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG 330
Query: 221 RGRTRRQP 228
G P
Sbjct: 331 PGAAAAAP 338
Score = 33.5 bits (75), Expect = 0.33
Identities = 34/125 (27%), Positives = 41/125 (32%), Gaps = 11/125 (8%)
Query: 76 FAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARL 135
F AAA P A P P A P P A LA G A
Sbjct: 243 FVGAAAPPAPAAPSPPAAPAPAAPAA----------APPPPPPAPATLARPPGHPAGPPT 292
Query: 136 LAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLR 195
A V ++ GA PAP A +G A PAPG + P+ +
Sbjct: 293 AAPAVPPPAAAQNGGSAGAAP-APAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVV 351
Query: 196 PASPP 200
A+PP
Sbjct: 352 QAAPP 356
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 44.7 bits (104), Expect = 1e-04
Identities = 62/232 (26%), Positives = 83/232 (35%), Gaps = 19/232 (8%)
Query: 10 QWVLRPLPSP-VLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRW 68
QW R P+P S+A + +S PG P R SR+R A PA A R
Sbjct: 28 QWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAA------PAAAPRLL 81
Query: 69 RGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARG 128
L G APA + R R +A P R P P + R
Sbjct: 82 PRVLAG--APARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHT 139
Query: 129 GAARARLLAVEVRVAVQSE-RHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGAR 187
RA A +R + R + + P P ++ + GP P R P PG
Sbjct: 140 RYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDH 199
Query: 188 RSRPRLLR--PASPPPRPAPRR------RSTAPRHEGGRPGRGRTRRQPHLA 231
R LR P+ PP P R + T P+ + P TRR+ +A
Sbjct: 200 PRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQPPPPPCA-TRREEDMA 250
Score = 29.3 bits (64), Expect = 6.1
Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 18/95 (18%)
Query: 6 PAPRQWVLRPLPSPVLS-----------AAMVSRASLQSKPGIPPIPVRRGHCCSRVRVA 54
P R+W RP PSP L A+ L+ PG P R C S A
Sbjct: 115 PTGRRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPA 174
Query: 55 DGQHVDPAGAGRRWRGGLRGGFAPAAARPRSAPRR 89
+ AG RG P A RP PRR
Sbjct: 175 RSRTPGEAGPP-------RGDPRPRAPRPGDHPRR 202
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 44.3 bits (103), Expect = 2e-04
Identities = 81/281 (28%), Positives = 97/281 (34%), Gaps = 59/281 (20%)
Query: 32 QSKPGIPPIPVRRGHCCSRVRVADGQHVDPAG---AGRRWRGGLRGGFAPA--AARPRSA 86
+SKP P RRG + + G H P A RRW R P +A PR
Sbjct: 109 RSKPSPPVSGTRRGKT-GQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHG 167
Query: 87 P-----RRRILGPGGRG-----------------------PQAEVPLVL-SERHVPAGIP 117
P RR P GRG P+ V +L S + A P
Sbjct: 168 PHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRP 227
Query: 118 GARGRLAPARGGAARARLLAVEVRVAVQSE---RHRHVGAVQLV------PAPRQAAQAA 168
R R A G R R + Q R AV L P P Q +
Sbjct: 228 APRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGS 287
Query: 169 DTGPRHASP--GARRPA--PGARRSRPRLLRPASPPPRPAPRRRST------APRHEGGR 218
+ PR A+P G+R P+ P RR R R R + P PR S A R GG
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGE 347
Query: 219 PGRGRTRRQPHLAG-----AGCARLELEGARMGERLHRRQG 254
R R RRQ G AG A G R R R++G
Sbjct: 348 ERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRG 388
Score = 32.3 bits (72), Expect = 0.73
Identities = 59/229 (25%), Positives = 80/229 (34%), Gaps = 33/229 (14%)
Query: 1 MPCSRPAPRQWVLRPLPSPVLSAAMVSRASL--QSKPGIPPIPVRRGHCCSRVRVADGQH 58
+P +P + W R S A S ASL +KP P P R
Sbjct: 188 VPRGQPEQQAWEQR---SSHFLAPEGSVASLLPSAKPARAPRPAPRAR------------ 232
Query: 59 VDPAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPG 118
+ A AG R RGG A +A+ P R+L + V L S P +
Sbjct: 233 -EEAAAGSRGRGGAERPAARGSAQ--QPPLARLL------LASAVSLAASLARSPPPLQP 283
Query: 119 ARGRLAPARGGAARARLLAVEVRVAVQSERHR--HVGAVQLVPAPRQAAQAADT-GPRHA 175
G +P R A A A + + R R A +P PR ++ + G R
Sbjct: 284 RLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRR 343
Query: 176 SPGARRPAPGARRS----RPRLLRPASPPPRPAPRRRSTAPRHEGGRPG 220
G R G R+ P + + P R RR + R GG PG
Sbjct: 344 RGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 392
Score = 28.9 bits (63), Expect = 8.0
Identities = 39/142 (27%), Positives = 52/142 (36%), Gaps = 37/142 (26%)
Query: 194 LRPASPP---PRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGARMGERLH 250
L P++ P PRPAPR R A GR G R + ARL L A
Sbjct: 215 LLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASA------- 267
Query: 251 RRQGAPETACIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVA---AGSSPPAGR 307
+ L S++++ L P+ A P +A AGS P+
Sbjct: 268 ----------VSLAASLARSPPPLQPR-----------LGSASPPRLAAPLAGSRAPS-- 304
Query: 308 FSMWPRDAQRLLHLCQAAPHGL 329
S +PR +R A HGL
Sbjct: 305 LSPFPRRCRRRAERSPAG-HGL 325
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 44.3 bits (103), Expect = 2e-04
Identities = 81/281 (28%), Positives = 97/281 (34%), Gaps = 59/281 (20%)
Query: 32 QSKPGIPPIPVRRGHCCSRVRVADGQHVDPAG---AGRRWRGGLRGGFAPA--AARPRSA 86
+SKP P RRG + + G H P A RRW R P +A PR
Sbjct: 109 RSKPSPPVSGTRRGKT-GQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSAPPRHG 167
Query: 87 P-----RRRILGPGGRG-----------------------PQAEVPLVL-SERHVPAGIP 117
P RR P GRG P+ V +L S + A P
Sbjct: 168 PHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPARAPRP 227
Query: 118 GARGRLAPARGGAARARLLAVEVRVAVQSE---RHRHVGAVQLV------PAPRQAAQAA 168
R R A G R R + Q R AV L P P Q +
Sbjct: 228 APRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGS 287
Query: 169 DTGPRHASP--GARRPA--PGARRSRPRLLRPASPPPRPAPRRRST------APRHEGGR 218
+ PR A+P G+R P+ P RR R R R + P PR S A R GG
Sbjct: 288 ASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGE 347
Query: 219 PGRGRTRRQPHLAG-----AGCARLELEGARMGERLHRRQG 254
R R RRQ G AG A G R R R++G
Sbjct: 348 ERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRG 388
Score = 32.3 bits (72), Expect = 0.73
Identities = 59/229 (25%), Positives = 80/229 (34%), Gaps = 33/229 (14%)
Query: 1 MPCSRPAPRQWVLRPLPSPVLSAAMVSRASL--QSKPGIPPIPVRRGHCCSRVRVADGQH 58
+P +P + W R S A S ASL +KP P P R
Sbjct: 188 VPRGQPEQQAWEQR---SSHFLAPEGSVASLLPSAKPARAPRPAPRAR------------ 232
Query: 59 VDPAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPG 118
+ A AG R RGG A +A+ P R+L + V L S P +
Sbjct: 233 -EEAAAGSRGRGGAERPAARGSAQ--QPPLARLL------LASAVSLAASLARSPPPLQP 283
Query: 119 ARGRLAPARGGAARARLLAVEVRVAVQSERHR--HVGAVQLVPAPRQAAQAADT-GPRHA 175
G +P R A A A + + R R A +P PR ++ + G R
Sbjct: 284 RLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRR 343
Query: 176 SPGARRPAPGARRS----RPRLLRPASPPPRPAPRRRSTAPRHEGGRPG 220
G R G R+ P + + P R RR + R GG PG
Sbjct: 344 RGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPG 392
Score = 28.9 bits (63), Expect = 8.0
Identities = 39/142 (27%), Positives = 52/142 (36%), Gaps = 37/142 (26%)
Query: 194 LRPASPP---PRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGARMGERLH 250
L P++ P PRPAPR R A GR G R + ARL L A
Sbjct: 215 LLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASA------- 267
Query: 251 RRQGAPETACIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVA---AGSSPPAGR 307
+ L S++++ L P+ A P +A AGS P+
Sbjct: 268 ----------VSLAASLARSPPPLQPR-----------LGSASPPRLAAPLAGSRAPS-- 304
Query: 308 FSMWPRDAQRLLHLCQAAPHGL 329
S +PR +R A HGL
Sbjct: 305 LSPFPRRCRRRAERSPAG-HGL 325
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 43.9 bits (102), Expect = 2e-04
Identities = 44/140 (31%), Positives = 55/140 (39%), Gaps = 26/140 (18%)
Query: 99 PQAEVPLVLSERHVPAGIPGARGR-----LAPARGGAARARLLAVEVRVAVQSERHRHVG 153
P+A P + S + P R R L RG A + A+ R E +
Sbjct: 21 PRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRA- 79
Query: 154 AVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPP-----PRPAPRRR 208
P +AA+ P G A G RS+PR RP PP PRPAP RR
Sbjct: 80 ------VPARAARGPPKRPAGGQTGGVEAASGEERSQPR--RPRRPPPAPRRPRPAPGRR 131
Query: 209 ST----AP---RHEGGRPGR 221
+ AP R +GGR GR
Sbjct: 132 KSLYEAAPLLTREKGGRSGR 151
Score = 35.0 bits (79), Expect = 0.11
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 171 GPRHASPGARRPAPGARRSRPR------LLRPASPPPRPAPRRRSTAPRHEGGRPGRGRT 224
GP AS G RP R+R R L P +P P PA R+ PR R R
Sbjct: 25 GPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARA 84
Query: 225 RRQPHLAGAGCARLELEGARMGERLHRRQ 253
R P AG +E A ER R+
Sbjct: 85 ARGPPKRPAGGQTGGVEAASGEERSQPRR 113
Score = 32.7 bits (73), Expect = 0.56
Identities = 44/165 (26%), Positives = 53/165 (32%), Gaps = 37/165 (22%)
Query: 63 GAGRRWRGGLRGGFAPAAARPRSAPRR-RILGPGGRGPQ----------AEVPLVLSERH 111
G +R GG GG A+ RS PRR R P R P+ PL+ E+
Sbjct: 87 GPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKG 146
Query: 112 VPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTG 171
+G G RG + G AR VG A G
Sbjct: 147 GRSGRRGDRGGSGWSHGHTAR-------------------VGGT----GDSSAGLTTFPG 183
Query: 172 PRHASPGARRPAPGARRSRPRLLRPASPPPRPAPR---RRSTAPR 213
R P R +P L R P P +PR R APR
Sbjct: 184 SSRGGFSGREEEPRRERRQPSLQRSTPPAPTYSPRSDPRDPAAPR 228
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 43.9 bits (102), Expect = 2e-04
Identities = 44/140 (31%), Positives = 55/140 (39%), Gaps = 26/140 (18%)
Query: 99 PQAEVPLVLSERHVPAGIPGARGR-----LAPARGGAARARLLAVEVRVAVQSERHRHVG 153
P+A P + S + P R R L RG A + A+ R E +
Sbjct: 21 PRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRA- 79
Query: 154 AVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPP-----PRPAPRRR 208
P +AA+ P G A G RS+PR RP PP PRPAP RR
Sbjct: 80 ------VPARAARGPPKRPAGGQTGGVEAASGEERSQPR--RPRRPPPAPRRPRPAPGRR 131
Query: 209 ST----AP---RHEGGRPGR 221
+ AP R +GGR GR
Sbjct: 132 KSLYEAAPLLTREKGGRSGR 151
Score = 35.0 bits (79), Expect = 0.11
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 171 GPRHASPGARRPAPGARRSRPR------LLRPASPPPRPAPRRRSTAPRHEGGRPGRGRT 224
GP AS G RP R+R R L P +P P PA R+ PR R R
Sbjct: 25 GPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARA 84
Query: 225 RRQPHLAGAGCARLELEGARMGERLHRRQ 253
R P AG +E A ER R+
Sbjct: 85 ARGPPKRPAGGQTGGVEAASGEERSQPRR 113
Score = 32.7 bits (73), Expect = 0.56
Identities = 44/165 (26%), Positives = 53/165 (32%), Gaps = 37/165 (22%)
Query: 63 GAGRRWRGGLRGGFAPAAARPRSAPRR-RILGPGGRGPQ----------AEVPLVLSERH 111
G +R GG GG A+ RS PRR R P R P+ PL+ E+
Sbjct: 87 GPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKG 146
Query: 112 VPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTG 171
+G G RG + G AR VG A G
Sbjct: 147 GRSGRRGDRGGSGWSHGHTAR-------------------VGGT----GDSSAGLTTFPG 183
Query: 172 PRHASPGARRPAPGARRSRPRLLRPASPPPRPAPR---RRSTAPR 213
R P R +P L R P P +PR R APR
Sbjct: 184 SSRGGFSGREEEPRRERRQPSLQRSTPPAPTYSPRSDPRDPAAPR 228
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 43.9 bits (102), Expect = 2e-04
Identities = 44/140 (31%), Positives = 55/140 (39%), Gaps = 26/140 (18%)
Query: 99 PQAEVPLVLSERHVPAGIPGARGR-----LAPARGGAARARLLAVEVRVAVQSERHRHVG 153
P+A P + S + P R R L RG A + A+ R E +
Sbjct: 21 PRARGPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRA- 79
Query: 154 AVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPP-----PRPAPRRR 208
P +AA+ P G A G RS+PR RP PP PRPAP RR
Sbjct: 80 ------VPARAARGPPKRPAGGQTGGVEAASGEERSQPR--RPRRPPPAPRRPRPAPGRR 131
Query: 209 ST----AP---RHEGGRPGR 221
+ AP R +GGR GR
Sbjct: 132 KSLYEAAPLLTREKGGRSGR 151
Score = 35.0 bits (79), Expect = 0.11
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 171 GPRHASPGARRPAPGARRSRPR------LLRPASPPPRPAPRRRSTAPRHEGGRPGRGRT 224
GP AS G RP R+R R L P +P P PA R+ PR R R
Sbjct: 25 GPAIASAGYSRPPSPVGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARA 84
Query: 225 RRQPHLAGAGCARLELEGARMGERLHRRQ 253
R P AG +E A ER R+
Sbjct: 85 ARGPPKRPAGGQTGGVEAASGEERSQPRR 113
Score = 32.7 bits (73), Expect = 0.56
Identities = 44/165 (26%), Positives = 53/165 (32%), Gaps = 37/165 (22%)
Query: 63 GAGRRWRGGLRGGFAPAAARPRSAPRR-RILGPGGRGPQ----------AEVPLVLSERH 111
G +R GG GG A+ RS PRR R P R P+ PL+ E+
Sbjct: 87 GPPKRPAGGQTGGVEAASGEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKG 146
Query: 112 VPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTG 171
+G G RG + G AR VG A G
Sbjct: 147 GRSGRRGDRGDSGWSHGHTAR-------------------VGGT----GDSSAGLTTFPG 183
Query: 172 PRHASPGARRPAPGARRSRPRLLRPASPPPRPAPR---RRSTAPR 213
R P R +P L R P P +PR R APR
Sbjct: 184 SSRGGFSGREEEPRRERRQPSLQRSTPPAPTYSPRSDPRDPAAPR 228
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 43.9 bits (102), Expect = 2e-04
Identities = 76/274 (27%), Positives = 96/274 (35%), Gaps = 54/274 (19%)
Query: 69 RGGLRGGFAPAAARPRSAPRRRILGPGGRG----PQAEVPLVLSERHVPAGIPGARGRLA 124
RG G A RP P G + Q E L++ P G GA G+
Sbjct: 442 RGRSLGSLASLHPRPGEGPGHSASAAGAQARSTATQEENGLLVGGTR-PEGGRGATGKDC 500
Query: 125 PARGGAAR-ARLLAVEVRVAVQSERHR---------HVGAVQLVPAPRQAAQAADTGPRH 174
P G + R A L V +RV ++ G+++ Q + GP
Sbjct: 501 PFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGP-- 558
Query: 175 ASPGARRPAPGARRSRPRLLRPASPPPRPAP---RRRSTAPRHEGGRPGR-------GRT 224
P P P R S P+ A P P+PA S P G PG GRT
Sbjct: 559 -GPPPEPPPPSQRGSAPQ--SGAKPSPQPATWVEGASSPRPPSSGAGPGSRRKPASPGRT 615
Query: 225 RRQPHLAGAGCARLELEGARMGER-----LHR------RQGAPETACIHLQVSISKNASE 273
R A L L GE LHR GAPE +HLQV S+ A
Sbjct: 616 LRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARG 675
Query: 274 LNPKFPQCHLINGPGFAEAKGP--MVAAGSSPPA 305
P PQ A+A P V +G +PP+
Sbjct: 676 RRP--PQ---------ADASPPYARVPSGETPPS 698
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 43.9 bits (102), Expect = 2e-04
Identities = 76/274 (27%), Positives = 96/274 (35%), Gaps = 54/274 (19%)
Query: 69 RGGLRGGFAPAAARPRSAPRRRILGPGGRG----PQAEVPLVLSERHVPAGIPGARGRLA 124
RG G A RP P G + Q E L++ P G GA G+
Sbjct: 442 RGRSLGSLASLHPRPGEGPGHSASAAGAQARSTATQEENGLLVGGTR-PEGGRGATGKDC 500
Query: 125 PARGGAAR-ARLLAVEVRVAVQSERHR---------HVGAVQLVPAPRQAAQAADTGPRH 174
P G + R A L V +RV ++ G+++ Q + GP
Sbjct: 501 PFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGP-- 558
Query: 175 ASPGARRPAPGARRSRPRLLRPASPPPRPAP---RRRSTAPRHEGGRPGR-------GRT 224
P P P R S P+ A P P+PA S P G PG GRT
Sbjct: 559 -GPPPEPPPPSQRGSAPQ--SGAKPSPQPATWVEGASSPRPPSSGAGPGSRRKPASPGRT 615
Query: 225 RRQPHLAGAGCARLELEGARMGER-----LHR------RQGAPETACIHLQVSISKNASE 273
R A L L GE LHR GAPE +HLQV S+ A
Sbjct: 616 LRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARG 675
Query: 274 LNPKFPQCHLINGPGFAEAKGP--MVAAGSSPPA 305
P PQ A+A P V +G +PP+
Sbjct: 676 RRP--PQ---------ADASPPYARVPSGETPPS 698
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 43.9 bits (102), Expect = 2e-04
Identities = 76/274 (27%), Positives = 96/274 (35%), Gaps = 54/274 (19%)
Query: 69 RGGLRGGFAPAAARPRSAPRRRILGPGGRG----PQAEVPLVLSERHVPAGIPGARGRLA 124
RG G A RP P G + Q E L++ P G GA G+
Sbjct: 442 RGRSLGSLASLHPRPGEGPGHSASAAGAQARSTATQEENGLLVGGTR-PEGGRGATGKDC 500
Query: 125 PARGGAAR-ARLLAVEVRVAVQSERHR---------HVGAVQLVPAPRQAAQAADTGPRH 174
P G + R A L V +RV ++ G+++ Q + GP
Sbjct: 501 PFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGP-- 558
Query: 175 ASPGARRPAPGARRSRPRLLRPASPPPRPAP---RRRSTAPRHEGGRPGR-------GRT 224
P P P R S P+ A P P+PA S P G PG GRT
Sbjct: 559 -GPPPEPPPPSQRGSAPQ--SGAKPSPQPATWVEGASSPRPPSSGAGPGSRRKPASPGRT 615
Query: 225 RRQPHLAGAGCARLELEGARMGER-----LHR------RQGAPETACIHLQVSISKNASE 273
R A L L GE LHR GAPE +HLQV S+ A
Sbjct: 616 LRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARG 675
Query: 274 LNPKFPQCHLINGPGFAEAKGP--MVAAGSSPPA 305
P PQ A+A P V +G +PP+
Sbjct: 676 RRP--PQ---------ADASPPYARVPSGETPPS 698
>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
sapiens]
Length = 756
Score = 43.1 bits (100), Expect = 4e-04
Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 16/83 (19%)
Query: 153 GAVQLVPAPRQAAQAADTG-PRHASPGARRPAPGAR---------------RSRPRLLRP 196
GA QL P P + A G P SPG PAPGA PR P
Sbjct: 28 GAAQLAPGPAELRLGAPVGGPDPQSPGLDEPAPGAAADGGARWSAGPAPGLEGGPRDPGP 87
Query: 197 ASPPPRPAPRRRSTAPRHEGGRP 219
++PPPR PR + +P G P
Sbjct: 88 SAPPPRSGPRGQLASPDAPGPGP 110
Score = 36.6 bits (83), Expect = 0.038
Identities = 40/123 (32%), Positives = 48/123 (39%), Gaps = 20/123 (16%)
Query: 62 AGAGRRWRGG----LRGGF---APAAARPRSAPRRRILGPG--GRGPQAEVPLVLSERHV 112
A G RW G L GG P+A PRS PR ++ P G GP++E PL
Sbjct: 64 ADGGARWSAGPAPGLEGGPRDPGPSAPPPRSGPRGQLASPDAPGPGPRSEAPL------- 116
Query: 113 PAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQL---VPAPRQAAQAAD 169
P P P G A A R+ S HR G V + PAP A +
Sbjct: 117 PELDPLFSWTEEPEECGPASCPESA-PFRLQGSSSSHRARGEVDVFSPFPAPTAGELALE 175
Query: 170 TGP 172
GP
Sbjct: 176 QGP 178
>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
sapiens]
Length = 351
Score = 43.1 bits (100), Expect = 4e-04
Identities = 52/153 (33%), Positives = 59/153 (38%), Gaps = 42/153 (27%)
Query: 77 APA-AARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARL 135
APA AARP P RR P P V VL H P G+P LAP G
Sbjct: 166 APAPAARPSPDPGRRP-PPAAPAPVVHVGPVLPLLHDPVGVP-----LAPLGHGG----- 214
Query: 136 LAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSR-PRLL 194
V A ER R + R S R P+PGA RS+ P
Sbjct: 215 ----VDWAENKERPRRL--------------------RLRSQRFRPPSPGAARSQLPETA 250
Query: 195 RPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQ 227
R P PRPA RR+ P +PG GR R+
Sbjct: 251 RRPRPRPRPALPRRAREP-----QPGSGRRCRR 278
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 43.1 bits (100), Expect = 4e-04
Identities = 81/310 (26%), Positives = 110/310 (35%), Gaps = 32/310 (10%)
Query: 1 MPCSRPAPRQWVLRPLPSPVLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD 60
+P + P P L P P L +++S SL G + + R S R A
Sbjct: 487 LPAAVPEPD---LEEEPVPDLLGSILSGQSLLML-GSSDVIIHRDGSLSAKRAAPVSFQR 542
Query: 61 PAGAGRRWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR 120
+G+ R G +G P A P +P + GP G PQ+ PA GA
Sbjct: 543 NSGSLSRGEEGFKGCLQPRAL-PSGSPAQ---GPSGNRPQSTGLSCQGRSRTPARTAGAP 598
Query: 121 GRL-APARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGA 179
RL PA GA +AR L+ + P +A A+ R + P
Sbjct: 599 VRLDLPAAPGAVQARNLSNGSVPGFRQSHSPWFNGTNKHTLPLASA-ASKISSRDSKPPC 657
Query: 180 RRPAPGARRSRPRLLRPASPPPRPAPRRR--STAPRHEGGRPGRGRTRRQPHLAGAGCAR 237
R PG PP +PAPRR S PR R G RR A A
Sbjct: 658 RSVVPG-------------PPLKPAPRRTDISELPRIPKIRRDDGGGRRD--AAPAHGQS 702
Query: 238 LELEGARMGERLHRRQGAPETACIHLQVSISKNASELNPKFPQCHL-INGPGFAEAKGPM 296
+E+ A + RL R+G + AS P+ P H + P + G +
Sbjct: 703 IEIPSACI-SRLTGREGTGQPG---RGTRAESEASSRVPREPGVHTGSSRPPAPSSHGSL 758
Query: 297 VAAGSSPPAG 306
G S G
Sbjct: 759 APLGPSRGKG 768
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 43.1 bits (100), Expect = 4e-04
Identities = 56/219 (25%), Positives = 76/219 (34%), Gaps = 37/219 (16%)
Query: 27 SRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAARPRSA 86
S + SK + P RR S V D P R + G P A PR+
Sbjct: 1581 SSPEVDSKSRLSP---RRSRSGSSPEVKDKPRAAP-----RAQSGSDSSPEPKAPAPRAL 1632
Query: 87 PRRRILGPGGRG----PQAEVPLVLSERHVPAGIPGARG-----------RLAPARGGAA 131
PRR G +G P+ S H P RG R P R +
Sbjct: 1633 PRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSR 1692
Query: 132 RARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHA-SPGARRPAPGARRSR 190
+ L + R++ +S A + T PRH SP P P +
Sbjct: 1693 SSPELTRKARLSRRSRS-----------ASSSPETRSRTPPRHRRSPSVSSPEPAEKSRS 1741
Query: 191 PRLLRPASPP--PRPAPRRRSTAPRHEGGRPGRGRTRRQ 227
R R AS P + R RS +P+ G + R R+RR+
Sbjct: 1742 SRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE 1780
Score = 35.4 bits (80), Expect = 0.086
Identities = 62/238 (26%), Positives = 84/238 (35%), Gaps = 38/238 (15%)
Query: 41 PVRRGHCCSRVRV--ADGQHVDPAGAGRRWRGGLRGGFAPAA---ARPRSAPRR---RIL 92
P RRG S R + ++ G R R G +PA +R R+ RR R
Sbjct: 528 PQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSR 587
Query: 93 GPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHV 152
P R ++ P + R + P RGR + +R A R VR +S
Sbjct: 588 TPARRRSRSRTP---TRRRSRSRTPARRGR-SRSRTPARRRSRTRSPVRRRSRSRS---- 639
Query: 153 GAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAP 212
PA R + T R +R PA RR R R PA R R +
Sbjct: 640 ------PARRSGRSRSRTPARRGRSRSRTPA---RRGRSRSRTPARRSGRSRSRTPARRG 690
Query: 213 RHEGGRPGRGRTR------------RQPHLAG-AGCARLELEGARMGERLHRRQGAPE 257
R P RGR+R R P G +G + +R +R R +PE
Sbjct: 691 RSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPE 748
Score = 34.7 bits (78), Expect = 0.15
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 160 APRQAAQAADTGPRHASPGARRPAPGARRSR-PRL---------------LRPASPPPRP 203
+P A P+ ASP ++P PG RRSR PR + P P+P
Sbjct: 2648 SPSPAKPGPQALPKPASP--KKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQP 2705
Query: 204 APRRRSTAPRHEGGRPG-RGRTRRQPH 229
+PR + ++ G R G RG +R H
Sbjct: 2706 SPRDQQSSSSERGSRRGQRGDSRSPSH 2732
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 159 PAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPR---PAPRRRSTA---- 211
P P+Q +Q T PR + G+ +P +R R +SPPP+ P R+S +
Sbjct: 784 PCPKQKSQ---TPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSP 840
Query: 212 -PRHEGGRPGR 221
P+ + G P R
Sbjct: 841 HPKVKSGTPPR 851
Score = 30.4 bits (67), Expect = 2.8
Identities = 49/206 (23%), Positives = 66/206 (32%), Gaps = 35/206 (16%)
Query: 23 AAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAAR 82
+A R S+ G P P RG SR R + RR R G + R
Sbjct: 1747 SASSPRTKTTSRRGRSPSPKPRGLQRSRSR---SRREKTRTTRRRDRSGSSQSTSRRRQR 1803
Query: 83 PRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRV 142
RS R GG G + P + R R P +R+R
Sbjct: 1804 SRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTS------ 1857
Query: 143 AVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPR 202
PAP + +++ + H +R P RRSR R SP R
Sbjct: 1858 ----------------PAPWKRSRSRASPATHRRSRSRTPLISRRRSRSR----TSPVSR 1897
Query: 203 PAPRRRSTAPRHEGGRPGRGRTRRQP 228
R R++ R R R+R P
Sbjct: 1898 RRSRSRTSVTRR------RSRSRASP 1917
Score = 30.4 bits (67), Expect = 2.8
Identities = 72/287 (25%), Positives = 100/287 (34%), Gaps = 47/287 (16%)
Query: 27 SRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLR--GGFAPAAARPR 84
SR S S+P + P P+ R C + ++P G+ R L+ GG PR
Sbjct: 2112 SRMSCFSRPSMSPTPLDR---CRSPGM-----LEPLGSSRTPMSVLQQAGGSMMDGPGPR 2163
Query: 85 SAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAA-RARLLAVEVRVA 143
+R P Q+ + L L+ I R P+ A AR+ V V
Sbjct: 2164 IPDHQRTSVPENHA-QSRIALALT------AISLGTARPPPSMSAAGLAARMSQVPAPVP 2216
Query: 144 VQSERHRHVGAV-QLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPR 202
+ S R + +PA AA + A P A A + + ASP
Sbjct: 2217 LMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASP--- 2273
Query: 203 PAPRRRSTAPRHEGGRPGRGRTRRQPHLAGA----GCARLELEGARMGERLHRRQGAPET 258
R + AP R T +LAGA A L L G+ G P T
Sbjct: 2274 ----RTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGS----------GTPPT 2319
Query: 259 ACIHLQVSISKNASELNPKFPQCHLINGPGFAEAKGPMVAAGSSPPA 305
A + +S P+ P + GP A A P+ AGS A
Sbjct: 2320 AANY-------PSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAA 2359
Score = 29.3 bits (64), Expect = 6.1
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 150 RHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAP---- 205
RH G+ Q + A +Q P ASP R P + P+ S PP P P
Sbjct: 373 RHGGSPQPL-ATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVS 431
Query: 206 RRRSTAPRHEGGRPGRGRTR 225
R S++P P G R
Sbjct: 432 RHASSSPESPKPAPAPGSHR 451
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 42.7 bits (99), Expect = 5e-04
Identities = 60/215 (27%), Positives = 78/215 (36%), Gaps = 36/215 (16%)
Query: 52 RVADGQHVDPAGAGRRWRGGLRGGF----APAAARPRSAPRRRILGPGGRGPQAEVPLVL 107
++ G PA G R G R A AAA+ AP R+ P R P
Sbjct: 162 KLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGR------ 215
Query: 108 SERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQA 167
P +P A A A + RA L E ++ +H R+ AQ
Sbjct: 216 -----PGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERT------RRPAQR 264
Query: 168 ADTGPR-HASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRR 226
++G R H S GA P L P PP P + +A R G R +R
Sbjct: 265 LESGCRGHCSRGA-----------PALAPPKLSPPFPCLAQ--SASRAAGARRALSASRG 311
Query: 227 QPHLAGAGCARLELEGAR-MGERLHRRQGAPETAC 260
+ L G+G L L G R +RLH GA C
Sbjct: 312 RRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346
Score = 31.6 bits (70), Expect = 1.2
Identities = 43/156 (27%), Positives = 52/156 (33%), Gaps = 48/156 (30%)
Query: 155 VQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSR---------PRLLRPASPPPRPAP 205
V +P PR PR A PG R PGAR ++ L PA+ P P
Sbjct: 152 VARLPEPRVGKLGKGPPPRPAPPGT-RCCPGARAAQLLREAAAAAQGLRAPAARLPEPTR 210
Query: 206 R----------------------RRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGA 243
R RR+ P E P R R R+ P RLE
Sbjct: 211 RAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLE---- 266
Query: 244 RMGERLHRRQGAPETACIHLQVSISKNASELNPKFP 279
G R H +GAP A +L+P FP
Sbjct: 267 -SGCRGHCSRGAPALA-----------PPKLSPPFP 290
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 42.7 bits (99), Expect = 5e-04
Identities = 52/164 (31%), Positives = 61/164 (37%), Gaps = 30/164 (18%)
Query: 77 APAAARPRSAPRRRILGPGGRGPQAEVP------LVLSERHVPAGIPGARGRLAPARGGA 130
+PA P AP P R P A P L L+E H A L PARGG
Sbjct: 223 SPAPCLPPPAP------PAARTPSAHSPAHTHFTLTLAEAHTRA--------LTPARGGG 268
Query: 131 ARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSR 190
V R E + + PAP + R SPGARR GAR
Sbjct: 269 EGDPGPIVGGR----PENEDSLASQTSPPAPPAPVPST---ARARSPGARR---GARELA 318
Query: 191 PRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAG 234
PR R P R + RRR+ + + G R H AGAG
Sbjct: 319 PRAGRRRQPSGRTSWRRRARREQRDREPAVCGAWPRGSHAAGAG 362
Score = 38.9 bits (89), Expect = 0.008
Identities = 33/90 (36%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 162 RQAAQAADTGPRHASPGARR------PAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHE 215
R+ A G R A PG R A GA +PR R A PP AP + APR
Sbjct: 63 RRRQGAVIVGRRRACPGRGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRR 122
Query: 216 GGRPGRGRTRRQPHLAGA-GCARLELEGAR 244
G RR P LA A G E G R
Sbjct: 123 AHLTGGPPRRRPPRLAAAHGLPASEAPGLR 152
Score = 37.4 bits (85), Expect = 0.023
Identities = 79/296 (26%), Positives = 97/296 (32%), Gaps = 54/296 (18%)
Query: 67 RWRGGLRGGFAPAAARPRSAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGAR-GRLAP 125
R RGGL G A A + RR PG R P H+ G P R RLA
Sbjct: 80 RGRGGLPGAAALGAGAQQPRRRRLAQPPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAA 139
Query: 126 ARGGAA------RARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAAD---------T 170
A G A R +R+ + S R L PAP A
Sbjct: 140 AHGLPASEAPGLRPDSARTRLRLRLASARLPR----GLPPAPAAGLWRAGCTRLRPLLLQ 195
Query: 171 GPRHASPGARRPAPGARRSRPRLLRPASPP----PRPAPRRRSTAPRHEGGRPGRGRTRR 226
P SPG + +PG L PA P P PAP T H T
Sbjct: 196 PPPMLSPGLAQ-SPGVELHARTLSLPAPSPAPCLPPPAPPAARTPSAHSPAHTHFTLTLA 254
Query: 227 QPHLAGAGCARLELEGARMGERLHRRQGAPETACIHLQVSISKNASELNPKFPQCHLING 286
+ H AR G G+ G PE AS+ +P P +
Sbjct: 255 EAHTRALTPAR----GGGEGDPGPIVGGRPENE--------DSLASQTSPPAPPAPV--- 299
Query: 287 PGFAEAKGPMVAAGS---SPPAGR------FSMWPRDAQRLLH-----LCQAAPHG 328
P A A+ P G+ +P AGR + W R A+R +C A P G
Sbjct: 300 PSTARARSPGARRGARELAPRAGRRRQPSGRTSWRRRARREQRDREPAVCGAWPRG 355
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 42.7 bits (99), Expect = 5e-04
Identities = 60/215 (27%), Positives = 78/215 (36%), Gaps = 36/215 (16%)
Query: 52 RVADGQHVDPAGAGRRWRGGLRGGF----APAAARPRSAPRRRILGPGGRGPQAEVPLVL 107
++ G PA G R G R A AAA+ AP R+ P R P
Sbjct: 162 KLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGR------ 215
Query: 108 SERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQA 167
P +P A A A + RA L E ++ +H R+ AQ
Sbjct: 216 -----PGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERT------RRPAQR 264
Query: 168 ADTGPR-HASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRR 226
++G R H S GA P L P PP P + +A R G R +R
Sbjct: 265 LESGCRGHCSRGA-----------PALAPPKLSPPFPCLAQ--SASRAAGARRALSASRG 311
Query: 227 QPHLAGAGCARLELEGAR-MGERLHRRQGAPETAC 260
+ L G+G L L G R +RLH GA C
Sbjct: 312 RRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346
Score = 31.6 bits (70), Expect = 1.2
Identities = 43/156 (27%), Positives = 52/156 (33%), Gaps = 48/156 (30%)
Query: 155 VQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSR---------PRLLRPASPPPRPAP 205
V +P PR PR A PG R PGAR ++ L PA+ P P
Sbjct: 152 VARLPEPRVGKLGKGPPPRPAPPGT-RCCPGARAAQLLREAAAAAQGLRAPAARLPEPTR 210
Query: 206 R----------------------RRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGA 243
R RR+ P E P R R R+ P RLE
Sbjct: 211 RAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLE---- 266
Query: 244 RMGERLHRRQGAPETACIHLQVSISKNASELNPKFP 279
G R H +GAP A +L+P FP
Sbjct: 267 -SGCRGHCSRGAPALA-----------PPKLSPPFP 290
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 42.7 bits (99), Expect = 5e-04
Identities = 60/215 (27%), Positives = 78/215 (36%), Gaps = 36/215 (16%)
Query: 52 RVADGQHVDPAGAGRRWRGGLRGGF----APAAARPRSAPRRRILGPGGRGPQAEVPLVL 107
++ G PA G R G R A AAA+ AP R+ P R P
Sbjct: 162 KLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQGLRAPAARLPEPTRRAPGR------ 215
Query: 108 SERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQA 167
P +P A A A + RA L E ++ +H R+ AQ
Sbjct: 216 -----PGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERT------RRPAQR 264
Query: 168 ADTGPR-HASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRR 226
++G R H S GA P L P PP P + +A R G R +R
Sbjct: 265 LESGCRGHCSRGA-----------PALAPPKLSPPFPCLAQ--SASRAAGARRALSASRG 311
Query: 227 QPHLAGAGCARLELEGAR-MGERLHRRQGAPETAC 260
+ L G+G L L G R +RLH GA C
Sbjct: 312 RRGLLGSGSLALPLPGCREPRQRLHGSDGAAGARC 346
Score = 31.6 bits (70), Expect = 1.2
Identities = 43/156 (27%), Positives = 52/156 (33%), Gaps = 48/156 (30%)
Query: 155 VQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSR---------PRLLRPASPPPRPAP 205
V +P PR PR A PG R PGAR ++ L PA+ P P
Sbjct: 152 VARLPEPRVGKLGKGPPPRPAPPGT-RCCPGARAAQLLREAAAAAQGLRAPAARLPEPTR 210
Query: 206 R----------------------RRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGA 243
R RR+ P E P R R R+ P RLE
Sbjct: 211 RAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRPRKHPERTRRPAQRLE---- 266
Query: 244 RMGERLHRRQGAPETACIHLQVSISKNASELNPKFP 279
G R H +GAP A +L+P FP
Sbjct: 267 -SGCRGHCSRGAPALA-----------PPKLSPPFP 290
>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 42.4 bits (98), Expect = 7e-04
Identities = 40/122 (32%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 106 VLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAA 165
VL + P PG+ GR AR GA A + R +PAPR+ A
Sbjct: 121 VLGKGGPPLRSPGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCA-------IPAPRRPA 173
Query: 166 QAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGR--PGRGR 223
AA G SPGA P G ++P P S P +P RST P G GR
Sbjct: 174 AAARLGSAARSPGA--PPAGRSLAQP---HPQSCPLARSPAYRSTGPNDPASNFTEGTGR 228
Query: 224 TR 225
R
Sbjct: 229 QR 230
Score = 36.6 bits (83), Expect = 0.038
Identities = 30/81 (37%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 171 GPRHASPG-------ARRPA-----PGARRSRPRLLRPAS--PPPRPAPRRRSTAPRHEG 216
GP SPG ARR A P A+R P LRP + P RPA R +
Sbjct: 126 GPPLRSPGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSP 185
Query: 217 GRPGRGRTRRQPHLAGAGCAR 237
G P GR+ QPH AR
Sbjct: 186 GAPPAGRSLAQPHPQSCPLAR 206
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 42.4 bits (98), Expect = 7e-04
Identities = 57/215 (26%), Positives = 70/215 (32%), Gaps = 20/215 (9%)
Query: 28 RASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAARPRSAP 87
RA L++K + P G + + P GAG G G A R
Sbjct: 46 RAPLRAKRTVLSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCT 105
Query: 88 RRR----ILGPGGRGPQAEVPLVLSERHVPAGI----------PGARGRLAPARGGAARA 133
R R G GGRG ++ H P+ P RGR A R A
Sbjct: 106 RGRGRFPCAGSGGRGARSR------GCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALL 159
Query: 134 RLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRL 193
+A R A+ + H A + A R Q G R P R RP
Sbjct: 160 ICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPG 219
Query: 194 LRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQP 228
LR P A R T R GGR G R +P
Sbjct: 220 LRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRP 254
>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
sapiens]
Length = 250
Score = 42.4 bits (98), Expect = 7e-04
Identities = 40/122 (32%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 106 VLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAA 165
VL + P PG+ GR AR GA A + R +PAPR+ A
Sbjct: 74 VLGKGGPPLRSPGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCA-------IPAPRRPA 126
Query: 166 QAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGR--PGRGR 223
AA G SPGA P G ++P P S P +P RST P G GR
Sbjct: 127 AAARLGSAARSPGA--PPAGRSLAQP---HPQSCPLARSPAYRSTGPNDPASNFTEGTGR 181
Query: 224 TR 225
R
Sbjct: 182 QR 183
Score = 36.6 bits (83), Expect = 0.038
Identities = 30/81 (37%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 171 GPRHASPG-------ARRPA-----PGARRSRPRLLRPAS--PPPRPAPRRRSTAPRHEG 216
GP SPG ARR A P A+R P LRP + P RPA R +
Sbjct: 79 GPPLRSPGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSP 138
Query: 217 GRPGRGRTRRQPHLAGAGCAR 237
G P GR+ QPH AR
Sbjct: 139 GAPPAGRSLAQPHPQSCPLAR 159
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 42.4 bits (98), Expect = 7e-04
Identities = 51/149 (34%), Positives = 56/149 (37%), Gaps = 23/149 (15%)
Query: 95 GGRGPQAEVPLVLSERH-VPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVG 153
GG+ +A L H VP + A APAR LA R R G
Sbjct: 65 GGQHRRAVARLPAEPAHAVPHPVRPAARLRAPARDPVP----LAGRQRAGAAP---RGPG 117
Query: 154 AVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPRPA--PRRRSTA 211
PA R +AAD PG PAPG R L +P P PR A PRR
Sbjct: 118 GPARTPAVRAGRRAAD------GPGEEAPAPGRARFSG-LSQPRGPQPRAAVRPRRGGAL 170
Query: 212 PRHEGGRPGRG------RTRRQPHLAGAG 234
PR G P RG R RR L G G
Sbjct: 171 PRGTGAVPERGPGTEPQRGRRCSDLQGLG 199
Score = 29.3 bits (64), Expect = 6.1
Identities = 30/90 (33%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 147 ERHRHVGAVQLVPAP-RQAAQAADTGPRHASPGARRPAPGARRSRPRLLRPA-SPPPRPA 204
E+H V Q+ R+A P HA P RPA RL PA P P
Sbjct: 53 EQHHDVDKGQVTGGQHRRAVARLPAEPAHAVPHPVRPAA-------RLRAPARDPVPLAG 105
Query: 205 PRRRSTAPRHEGGRPGRGRTRRQPHLAGAG 234
+R APR GG P R R A G
Sbjct: 106 RQRAGAAPRGPGG-PARTPAVRAGRRAADG 134
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 42.4 bits (98), Expect = 7e-04
Identities = 57/215 (26%), Positives = 70/215 (32%), Gaps = 20/215 (9%)
Query: 28 RASLQSKPGIPPIPVRRGHCCSRVRVADGQHVDPAGAGRRWRGGLRGGFAPAAARPRSAP 87
RA L++K + P G + + P GAG G G A R
Sbjct: 46 RAPLRAKRTVLSSPSLGGGPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCT 105
Query: 88 RRR----ILGPGGRGPQAEVPLVLSERHVPAGI----------PGARGRLAPARGGAARA 133
R R G GGRG ++ H P+ P RGR A R A
Sbjct: 106 RGRGRFPCAGSGGRGARSR------GCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALL 159
Query: 134 RLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRSRPRL 193
+A R A+ + H A + A R Q G R P R RP
Sbjct: 160 ICIAPRPRPALPAALHIGARATAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPG 219
Query: 194 LRPASPPPRPAPRRRSTAPRHEGGRPGRGRTRRQP 228
LR P A R T R GGR G R +P
Sbjct: 220 LRSGDVPRGGARVERPTGRRGAGGRGGAQRIPPRP 254
>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
sapiens]
Length = 250
Score = 42.4 bits (98), Expect = 7e-04
Identities = 40/122 (32%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 106 VLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAA 165
VL + P PG+ GR AR GA A + R +PAPR+ A
Sbjct: 74 VLGKGGPPLRSPGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCA-------IPAPRRPA 126
Query: 166 QAADTGPRHASPGARRPAPGARRSRPRLLRPASPPPRPAPRRRSTAPRHEGGR--PGRGR 223
AA G SPGA P G ++P P S P +P RST P G GR
Sbjct: 127 AAARLGSAARSPGA--PPAGRSLAQP---HPQSCPLARSPAYRSTGPNDPASNFTEGTGR 181
Query: 224 TR 225
R
Sbjct: 182 QR 183
Score = 36.6 bits (83), Expect = 0.038
Identities = 30/81 (37%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 171 GPRHASPG-------ARRPA-----PGARRSRPRLLRPAS--PPPRPAPRRRSTAPRHEG 216
GP SPG ARR A P A+R P LRP + P RPA R +
Sbjct: 79 GPPLRSPGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSP 138
Query: 217 GRPGRGRTRRQPHLAGAGCAR 237
G P GR+ QPH AR
Sbjct: 139 GAPPAGRSLAQPHPQSCPLAR 159
>gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo
sapiens]
Length = 738
Score = 42.0 bits (97), Expect = 0.001
Identities = 52/161 (32%), Positives = 63/161 (39%), Gaps = 36/161 (22%)
Query: 8 PRQWVLRPL--PSP-----VLSAAMVSRASLQSKPGIPPIPVRRGHCCSRVRVADGQHVD 60
P W LR L PSP +L A V A+ + + P R +R+ A +
Sbjct: 4 PPAWPLRLLEPPSPAEPGRLLPVACVWAAASRVPGSLSPFTGLRP---ARLWGAGPALLW 60
Query: 61 PAGAGRRWRGGLRGGFAPAAAR---------------PRSAPRRRILGPGG-RGPQAEVP 104
GA RRWR G RGG P A+R P S GPG R P+A P
Sbjct: 61 GVGAARRWRSGCRGG-GPGASRGVLGLARLLGLWARGPGSCRCGAFAGPGAPRLPRARFP 119
Query: 105 LVLSE---------RHVPAGIPGARGRLAPARGGAARARLL 136
+ R PA PG +GRL PA G AR L
Sbjct: 120 GGPAAAAWAGDEAWRRGPAAPPGDKGRLRPAAAGLPEARKL 160
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,561,930
Number of Sequences: 37866
Number of extensions: 1262248
Number of successful extensions: 11977
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 1038
Number of HSP's that attempted gapping in prelim test: 9189
Number of HSP's gapped (non-prelim): 3223
length of query: 380
length of database: 18,247,518
effective HSP length: 104
effective length of query: 276
effective length of database: 14,309,454
effective search space: 3949409304
effective search space used: 3949409304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.