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Search of human proteins with 239753500
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens] 439 e-124
gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo ... 437 e-123
gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo ... 437 e-123
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 56 3e-08
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 47 9e-06
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 47 9e-06
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 47 9e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 9e-06
gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 47 1e-05
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 47 2e-05
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 47 2e-05
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 46 3e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 46 3e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 46 3e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 46 3e-05
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-05
gi|195963410 MEF2 activating motif and SAP domain containing tra... 45 4e-05
gi|32698970 MEF2 activating motif and SAP domain containing tran... 45 4e-05
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 45 5e-05
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 45 5e-05
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 45 5e-05
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 45 5e-05
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 45 5e-05
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|41281612 zinc finger protein 828 [Homo sapiens] 44 8e-05
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 1e-04
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 1e-04
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 44 1e-04
>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 439 bits (1129), Expect = e-124
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MRGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
MRGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG
Sbjct: 1 MRGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
Query: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT 120
SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT
Sbjct: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT 120
Query: 121 RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD 180
RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD
Sbjct: 121 RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD 180
Query: 181 LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC 213
LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC
Sbjct: 181 LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC 213
>gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo
sapiens]
Length = 213
Score = 437 bits (1124), Expect = e-123
Identities = 212/213 (99%), Positives = 212/213 (99%)
Query: 1 MRGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
MRGLRASGASP PRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG
Sbjct: 1 MRGLRASGASPRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
Query: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT 120
SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT
Sbjct: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT 120
Query: 121 RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD 180
RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD
Sbjct: 121 RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD 180
Query: 181 LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC 213
LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC
Sbjct: 181 LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC 213
>gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo
sapiens]
Length = 213
Score = 437 bits (1124), Expect = e-123
Identities = 212/213 (99%), Positives = 212/213 (99%)
Query: 1 MRGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
MRGLRASGASP PRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG
Sbjct: 1 MRGLRASGASPRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
Query: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT 120
SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT
Sbjct: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT 120
Query: 121 RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD 180
RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD
Sbjct: 121 RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRD 180
Query: 181 LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC 213
LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC
Sbjct: 181 LGLKEQEPVAVVEGAAWRRRLMSVAPAGCRAGC 213
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 55.8 bits (133), Expect = 3e-08
Identities = 72/236 (30%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 2 RGLRASGASPSPRSSPARSHPPAPLPF--PERLPR-------------PAAKEPAARTPA 46
RG A+ A+ +P +PA PPAP+ P R PR PA P A+ A
Sbjct: 116 RGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAA 175
Query: 47 RQVFPAAASAGREGSAAPDGARGSTPGLAASRE--LSPPPRAP-----RTVPAPHPRLSP 99
P A A A P G R + P A+RE L PPP+ P + P P P+ P
Sbjct: 176 PLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPP 235
Query: 100 ---ARRPG--AEPENKFVALR--------GSHKTRNREPGMLREAFKS-----APPTGSG 141
A R G A P + +R G TR R G+L E + G+
Sbjct: 236 EGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGAL 295
Query: 142 YCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGR--EPGEWRDLGLKEQEPVAVVEGA 195
P RPG R P A ++S+ E R E E D E E V EG+
Sbjct: 296 ALPRGDRPG---RAPPAASARPSRSKRGGEERVLEKEEEEDDDEDEDEEDDVSEGS 348
Score = 49.3 bits (116), Expect = 2e-06
Identities = 39/104 (37%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 2 RGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGS 61
RG +PR +PA + AP P P P PA AA PAR AAA+A
Sbjct: 104 RGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPA--PVAAAAPARAPRAAAAAA----- 156
Query: 62 AAPDGARGSTPGLAASR--ELSPPPRAPRTVPAPHPRLSPARRP 103
AP + PG A R L+ PP AP PA P P R P
Sbjct: 157 TAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAP 200
Score = 32.3 bits (72), Expect = 0.31
Identities = 28/91 (30%), Positives = 33/91 (36%), Gaps = 16/91 (17%)
Query: 33 PRPAAKEPAARTPARQVFPAAASAGREGSAAPD--------GARGSTPGLAASRELSPP- 83
PR A PA R AAA+A + AP A P AA+ +PP
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPS 161
Query: 84 -------PRAPRTVPAPHPRLSPARRPGAEP 107
PRA R P P +PA P P
Sbjct: 162 PGPAQPGPRAQRAAPLAAPPPAPAAPPAVAP 192
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 47.4 bits (111), Expect = 9e-06
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 8 GASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGA 67
G +P P+ +PA S PP P +P P+ K PA P+++ PA + R+ SAA
Sbjct: 435 GLAP-PQKAPAASAPPRKAP---AVPAPSQKAPAVPAPSQKA-PAIPAPSRKASAASASP 489
Query: 68 RGSTPGLAASRELSPPP--RAPRTVPAPHPRLSPARRPGAEPENKFVALRG-SHKTRNRE 124
R ++ + A + +PPP +AP P +SP P+ K + L S K
Sbjct: 490 RKAS-AVPAPPQKTPPPSQKAPSVPTIPQKAVSP-----TAPKKKSLLLPAPSQKALPTS 543
Query: 125 PGMLREAFKSAPPTGSGYCP--LSVRPGLWRRVPGGAFLLTAQS 166
P + A +PP G P V P +PG A L +QS
Sbjct: 544 PTEYQMAL--SPPASRGKLPGDFDVLP---TGIPGRAVLERSQS 582
Score = 33.5 bits (75), Expect = 0.14
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 5 RASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAART-PARQVFPAAASAGREGSAA 63
+AS AS SPR + A PAP P++ P P+ K P+ T P + V P A A
Sbjct: 481 KASAASASPRKASA---VPAP---PQKTPPPSQKAPSVPTIPQKAVSPTAPKKKSLLLPA 534
Query: 64 PDGARGSTPGLAASRELSPP 83
P T LSPP
Sbjct: 535 PSQKALPTSPTEYQMALSPP 554
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 47.4 bits (111), Expect = 9e-06
Identities = 37/103 (35%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 2 RGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAA--KEPAARTPARQVFPAAASAGRE 59
RG RA + PA PPAP P + P P A EPAA A AAA+A
Sbjct: 44 RGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPEALPAEPAAEAEAE----AAAAAAEP 99
Query: 60 GSAAPDGARGSTPGLAASRELS--------PPPRAPRTVPAPH 94
G + A G PG + E+ PP RAPR + PH
Sbjct: 100 GFDDEEAAEGGGPG---AEEVECPLCLVRLPPERAPRLLSCPH 139
Score = 30.0 bits (66), Expect = 1.5
Identities = 33/119 (27%), Positives = 40/119 (33%), Gaps = 24/119 (20%)
Query: 36 AAKEPAARTPARQ-------VFPAAASAGREGSAAPDGARGSTPGLAASRELSPPPRAPR 88
AA +P R+ R+ VF A+A GR A P + PPP A +
Sbjct: 18 AAPDPKCRSGGRRRRLTLHSVFSASAR-GRRARAKP--------------QAEPPPPAAQ 62
Query: 89 TVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLRE--AFKSAPPTGSGYCPL 145
PAP P + P A P EPG E A P CPL
Sbjct: 63 PPPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGGPGAEEVECPL 121
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 47.4 bits (111), Expect = 9e-06
Identities = 37/103 (35%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 2 RGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAA--KEPAARTPARQVFPAAASAGRE 59
RG RA + PA PPAP P + P P A EPAA A AAA+A
Sbjct: 44 RGRRARAKPQAEPPPPAAQPPPAPAPAAAQGPPPEALPAEPAAEAEAE----AAAAAAEP 99
Query: 60 GSAAPDGARGSTPGLAASRELS--------PPPRAPRTVPAPH 94
G + A G PG + E+ PP RAPR + PH
Sbjct: 100 GFDDEEAAEGGGPG---AEEVECPLCLVRLPPERAPRLLSCPH 139
Score = 30.0 bits (66), Expect = 1.5
Identities = 33/119 (27%), Positives = 40/119 (33%), Gaps = 24/119 (20%)
Query: 36 AAKEPAARTPARQ-------VFPAAASAGREGSAAPDGARGSTPGLAASRELSPPPRAPR 88
AA +P R+ R+ VF A+A GR A P + PPP A +
Sbjct: 18 AAPDPKCRSGGRRRRLTLHSVFSASAR-GRRARAKP--------------QAEPPPPAAQ 62
Query: 89 TVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLRE--AFKSAPPTGSGYCPL 145
PAP P + P A P EPG E A P CPL
Sbjct: 63 PPPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGGPGAEEVECPL 121
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.4 bits (111), Expect = 9e-06
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 20/178 (11%)
Query: 2 RGLRASGASPSPRSSPARSHPPAP--LPFPERLPRPAAKEPAARTPARQVFPAAASAGRE 59
+G A+ P S+P + PP+P P LP+ A PAA P+ + PA S +
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSL--K 1077
Query: 60 GSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPG-AEPENKFVALRGSH 118
G+ P A +P + P +P+ P P P+ + G A P +K G+
Sbjct: 1078 GAPTPPAATPPSP------KGGPATPSPKGAPMPPAATPPSPKGGLATPPHK-----GAP 1126
Query: 119 KTRNREPGMLREAFKSAPPTGSGYCPLSVRP----GLWRRVPGGAFLLTAQSQPAAEG 172
T P + + PP G+ P + P GL P GA A + P+ +G
Sbjct: 1127 TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184
Score = 44.7 bits (104), Expect = 6e-05
Identities = 50/185 (27%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 9 ASPSPRSSPA--RSHPPAP-----LPFPERLPRPAAKEPAA--RTPARQVFPAAASAGRE 59
A+PSP+ +P + PP+P P P+ P P A P + +PA FP AS
Sbjct: 978 ATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPA 1037
Query: 60 GS-AAPDGARGSTP-----GLAASRELSPPPRAPRT-----VPAPHPRLSPARRPG-AEP 107
+ +P G+ +TP + L P P T P P P+ + G A P
Sbjct: 1038 ATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097
Query: 108 ENKFVALRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQ 167
K + + + + G+ K AP T + P S + GL P GA A +
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAA-TPPSPKGGLATPPPKGAPTTPAATP 1156
Query: 168 PAAEG 172
P+ +G
Sbjct: 1157 PSPKG 1161
Score = 43.1 bits (100), Expect = 2e-04
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 24/186 (12%)
Query: 9 ASPSPRSSPA--RSHPPAP-----LPFPERLPRPAAKEPAA-----RTPARQ---VFPAA 53
ASPSP+ +P + PP+P P P+ P P A P + TP+ + PAA
Sbjct: 932 ASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAA 991
Query: 54 ASAGREGSAAPDGARG-------STPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAE 106
+G A +G + P S +P P+ T PA P SP P A
Sbjct: 992 TPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP-SPKGSPAAT 1050
Query: 107 PENKFVALRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQS 166
P K + + + G + K A PT P S + G P GA + A +
Sbjct: 1051 PLPKGAPTTPAATLPSPKGGPATPSLKGA-PTPPAATPPSPKGGPATPSPKGAPMPPAAT 1109
Query: 167 QPAAEG 172
P+ +G
Sbjct: 1110 PPSPKG 1115
Score = 39.7 bits (91), Expect = 0.002
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 9 ASPSPRSSPAR--SHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDG 66
A+PSP+ +P + PP+P P P A P A TP + A+ +G AP+
Sbjct: 1233 ATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP-SLKGGLATPPHKG--APNP 1289
Query: 67 ARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEP 107
A + P SPP AP T PA P SP PG P
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAP-TPPAATPP-SPKGSPGTPP 1328
Score = 38.1 bits (87), Expect = 0.006
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 9 ASPSPRSSPARSHPP-APLPFPERLPRPAAKEPAARTPARQVFPAAAS----AGREGSAA 63
A+P+P+ PA P AP P P P PA +P P AA+ G + +
Sbjct: 923 ATPAPKGIPASPSPKGAPTP-PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPS 981
Query: 64 PDGA---RGSTPGLAASRELSPPPRAPRTVPA---PHPRLSPARRP 103
P GA +TP +P P+ T PA P P+ SPA P
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP 1027
Score = 36.6 bits (83), Expect = 0.016
Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 18/151 (11%)
Query: 11 PSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPAR-----QVFPAAASAGREGSAAPD 65
PSP+ PA + PP P P P+ K A P + V + G ++ P
Sbjct: 1249 PSPKGGPA-TPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 66 GA---RGSTPGLAASRELSPPPRAPRTVPA---PHPRLSPARRPGAEPENKFVALRGSHK 119
GA +TP +PPP+ T PA P P+ +P P P +K G
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPT-LPATTPSSK-----GGPT 1361
Query: 120 TRNREPGMLREAFKSAPPTGSGYCPLSVRPG 150
T + + G A + G P S + G
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSPKRG 1392
Score = 36.2 bits (82), Expect = 0.021
Identities = 52/190 (27%), Positives = 69/190 (36%), Gaps = 22/190 (11%)
Query: 7 SGASPSPRSSPARSH-----------PPAPLPFPERLPRPAAKEPAARTPARQVFPA--- 52
S PSP+ +P S PP P P + P KE A TPA + PA
Sbjct: 855 SPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPA-TPAPKQAPALSM 913
Query: 53 AASAGREGSA--APDGARGSTPGLAASRELSPPPRAPRTVPA-PHPRLSPARRPGAEPEN 109
+S+ ++ A AP G S A + P +P+ PA P P+ +P P
Sbjct: 914 TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973
Query: 110 KFVALRGSHKTRNREPGMLREAFKSAPPTGS---GYCPLSVRPGLWRRVPGGA-FLLTAQ 165
K S K P + K P T S P +V P + P F A
Sbjct: 974 KGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS 1033
Query: 166 SQPAAEGREP 175
+ PAA P
Sbjct: 1034 TPPAATPPSP 1043
Score = 35.0 bits (79), Expect = 0.047
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Query: 11 PSPRSSPARSHPPAPLPF-------PERLPRPAAKEPAARTPARQVFPAAASAGREGSAA 63
P + S A S P P P P PA P + ++ AS +G A
Sbjct: 1704 PQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLA 1763
Query: 64 PDGARGSTPGLAASRE-LSPPPRAPRTVPAPHP----RLSPARRPGAEPENKFV 112
P ++ STP AA+ E + P P + AP P L+P+ P P+ +F+
Sbjct: 1764 PPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFL 1817
Score = 33.5 bits (75), Expect = 0.14
Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 10 SPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARG 69
S SP+ +PA P P +P + PA TP+ + P A +A
Sbjct: 1487 SSSPKKAPATPAPMGAPTLPAVIPSSPKEVPA--TPSSRRDPIAPTATLLSK-------- 1536
Query: 70 STPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLR 129
TP A +E PP TVP+P ++ A P K S K + P +
Sbjct: 1537 KTPATLAPKEALIPP--AMTVPSP-------KKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Query: 130 EAFKSAP 136
+K AP
Sbjct: 1588 STYKGAP 1594
Score = 32.7 bits (73), Expect = 0.24
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 21/173 (12%)
Query: 9 ASPSPRSSPAR-------SHPPAPLPFPERLPRPAAKEPAART----PARQVFPAAASAG 57
A+PS R P PA L E L PA P+ + P + PA S+
Sbjct: 1518 ATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSS- 1576
Query: 58 REGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGS 117
+E S+ P + G + +EL PP V +P P+ +P P + +
Sbjct: 1577 KEASSPPAVTPSTYKGAPSPKELLIPP----AVTSPSPKEAPTPPAVTPPSPEKGPATPA 1632
Query: 118 HKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAA 170
K P + + K +P + P SV + VP + L A+ P A
Sbjct: 1633 PKGTPTSPPVTPSSLKDSPTS-----PASVTCKMGATVPQASKGLPAKKGPTA 1680
Score = 30.8 bits (68), Expect = 0.89
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 23/111 (20%)
Query: 11 PSPRSSPARSHP------PAPLPF-PERLPR-PAAKE-----------PAARTPARQVFP 51
PSP+ PA P PA +P P++ P P +E P A TP
Sbjct: 1387 PSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA 1446
Query: 52 AAASAGREGSAAPDGARGSTPGLAASRELSP--PPRAPRTVPAPHPRLSPA 100
A SA + G A P P L A SP PP + + P+ +PA
Sbjct: 1447 PATSAPKGGPATPSSK--GDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPA 1495
>gi|92091600 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain
1 isoform c [Homo sapiens]
Length = 1450
Score = 47.0 bits (110), Expect = 1e-05
Identities = 50/159 (31%), Positives = 60/159 (37%), Gaps = 14/159 (8%)
Query: 6 ASGASPSPRSSPARSH----PPAPLPFPERLPRPAAKE--PAART--PARQVFPAAASAG 57
A P+PR P + H PP P PE LP E PAA P R P
Sbjct: 72 APAPRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRRSCLPPTCFT- 130
Query: 58 REGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGS 117
+AAPD P ELS PP PRT P PRL P E E+ +L
Sbjct: 131 TPSTAAPDPVLPPLPAKRHLAELSVPPVPPRTGP---PRLL-VSLPTKEEESLLPSLSSP 186
Query: 118 HKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVP 156
+ ++ EP PP+ CP + P R P
Sbjct: 187 PQPQSEEPLSTLPQGPPQPPSPPP-CPPEIPPKPVRLFP 224
>gi|153791535 general control of amino acid synthesis 5-like 2
[Homo sapiens]
Length = 837
Score = 46.6 bits (109), Expect = 2e-05
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 10 SPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAP---DG 66
+P+P + P PAP P P P PA+ TPA PAAA AG G+ P G
Sbjct: 9 TPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGTGGPGVGSG 68
Query: 67 ARGS-----TPGLAASRELSPPPRAPRTVP 91
GS PGL+ + S R +P
Sbjct: 69 GAGSGGDPARPGLSQQQRASQRKAQVRGLP 98
Score = 28.5 bits (62), Expect = 4.4
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 59 EGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEP 107
E S AP A + P R L P AP PAP P +P P P
Sbjct: 3 EPSQAPTPAPAAQP-----RPLQSPAPAPTPTPAPSPASAPIPTPTPAP 46
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 46.6 bits (109), Expect = 2e-05
Identities = 54/178 (30%), Positives = 61/178 (34%), Gaps = 33/178 (18%)
Query: 11 PSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGS 70
P P P +H A LPFP P P A PA P A P A S
Sbjct: 1020 PGPAQDPLPAHSGA-LPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQS 1078
Query: 71 TPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLRE 130
TP P P P+P P P R P AEP P LR
Sbjct: 1079 TPS---------PHLVPSPAPSPGPGPVPPRPPAAEP-----------------PPCLRR 1112
Query: 131 AFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGEWRDLGLKEQEP 188
+A S P S G + GG LL AAEGR P + L L E++P
Sbjct: 1113 GAAAADLLSSS--PESQHGGT-QSPGGGQPLLQPTKVDAAEGRRP---QALRLIERDP 1164
Score = 42.4 bits (98), Expect = 3e-04
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 43/156 (27%)
Query: 7 SGASPSPRSSPARSHPPAPLPFPERLPRP-----AAKEPAARTPARQVFPAAASAGREGS 61
S +P P +PA P P+P P+ LP P AK+P PA+ F + AG
Sbjct: 893 SHTAPRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQP---IPAQHHFSSGIPAG---- 945
Query: 62 AAPDGARGSTPGLAASRELSPPPR-APRTVPAPHPRLSPARRPGAEPENKFVALRGSHKT 120
P PR P+ P PHP+ P++ G +P + + L+ H
Sbjct: 946 -------------------FPAPRIGPQ--PQPHPQPHPSQAFGPQPPQQPLPLQHPHLF 984
Query: 121 RNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVP 156
+ PG+L P S Y P + +PG+ + P
Sbjct: 985 PPQAPGLL--------PPQSPY-PYAPQPGVLGQPP 1011
Score = 33.1 bits (74), Expect = 0.18
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 1 MRGLRASGAS-PSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGRE 59
+RG ++G S PSP P+ + P P P P PRP A EP A+A
Sbjct: 1069 IRGPSSAGQSTPSPHLVPSPAPSPGPGPVP---PRPPAAEPP------PCLRRGAAAADL 1119
Query: 60 GSAAPDGARGSTPGLAASRELSPPPR 85
S++P+ G T + L P +
Sbjct: 1120 LSSSPESQHGGTQSPGGGQPLLQPTK 1145
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 45.8 bits (107), Expect = 3e-05
Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 2 RGLRASGASPSPR---SSPARSHPPAPLPF-PERLPRP-AAKEPAARTPARQVFPAAASA 56
RG ++GA SP S+P + PP P P P R RP A P A + A+ +
Sbjct: 49 RGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCS 108
Query: 57 GREGSAAPDGARGSTPGLAASRELSPP----PRAPRTV---PAPHPRLSPARRPGAEPEN 109
GR GSA R S L+A++ P P A RT PA PR SP RPG+E
Sbjct: 109 GRAGSAGR--LRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRPGSEARG 166
Query: 110 K 110
+
Sbjct: 167 R 167
Score = 33.9 bits (76), Expect = 0.11
Identities = 53/167 (31%), Positives = 58/167 (34%), Gaps = 15/167 (8%)
Query: 18 ARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGA-RGSTPGLAA 76
A S P L +R P A E A R AA AG + P GA PG
Sbjct: 2 AISGGPRRLAGLQRTPAAYANEAALAISGRADEEGAAGAGSKLWRRPRGAVSAGAPGSPL 61
Query: 77 SRELSPPPRAPRTVPAP-----HPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLR-- 129
R +PPP AP P P R RPGA + R S R G LR
Sbjct: 62 YRVSAPPP-APPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCS 120
Query: 130 EAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPG 176
A SA G G V P L PG A A+ G PG
Sbjct: 121 AAALSAAQRG-GPARAQVPPALRTFSPG-----PASPPRASPGGRPG 161
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 45.8 bits (107), Expect = 3e-05
Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 2 RGLRASGASPSPR---SSPARSHPPAPLPF-PERLPRP-AAKEPAARTPARQVFPAAASA 56
RG ++GA SP S+P + PP P P P R RP A P A + A+ +
Sbjct: 49 RGAVSAGAPGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCS 108
Query: 57 GREGSAAPDGARGSTPGLAASRELSPP----PRAPRTV---PAPHPRLSPARRPGAEPEN 109
GR GSA R S L+A++ P P A RT PA PR SP RPG+E
Sbjct: 109 GRAGSAGR--LRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRPGSEARG 166
Query: 110 K 110
+
Sbjct: 167 R 167
Score = 33.9 bits (76), Expect = 0.11
Identities = 53/167 (31%), Positives = 58/167 (34%), Gaps = 15/167 (8%)
Query: 18 ARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGA-RGSTPGLAA 76
A S P L +R P A E A R AA AG + P GA PG
Sbjct: 2 AISGGPRRLAGLQRTPAAYANEAALAISGRADEEGAAGAGSKLWRRPRGAVSAGAPGSPL 61
Query: 77 SRELSPPPRAPRTVPAP-----HPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLR-- 129
R +PPP AP P P R RPGA + R S R G LR
Sbjct: 62 YRVSAPPP-APPPPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCS 120
Query: 130 EAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPG 176
A SA G G V P L PG A A+ G PG
Sbjct: 121 AAALSAAQRG-GPARAQVPPALRTFSPG-----PASPPRASPGGRPG 161
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 45.8 bits (107), Expect = 3e-05
Identities = 48/164 (29%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 9 ASPSPRSSPA----RSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAP 64
A+PSP ++PA + PP P P P L RP PA A P A+A GSA
Sbjct: 253 AAPSPPAAPAPAAPAAAPPPPPPAPATLARPPG-HPAGPPTAAPAVPPPAAAQNGGSAGA 311
Query: 65 DGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARR--PGAEPENKFVALRGSHKTRN 122
A G A P P A PAP + +R A P + +A G T
Sbjct: 312 APAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAST-- 369
Query: 123 REPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQS 166
++ + A P+ + P + PG +P GA QS
Sbjct: 370 AASMVIGPTMQGALPSPAAVPPPA--PGTPTGLPKGAAGAVTQS 411
Score = 34.3 bits (77), Expect = 0.081
Identities = 57/211 (27%), Positives = 76/211 (36%), Gaps = 32/211 (15%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPD 65
A A P+ ++ A P P P P P P +PA A+ + +AA +AAP
Sbjct: 155 AGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPA 214
Query: 66 GARGSTPGLAASRELSPPPRAPRTV------------PAPHPRLSPARRPGAEPENKFVA 113
+ + G AA L P P AP TV PAP PA A P
Sbjct: 215 VSLVNN-GPAALLPL-PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPP 272
Query: 114 LRGSHKTRNREPGMLREAFKSAPPTGSGYCP---LSVRPGLWRRVP------GGAFLLTA 164
+ T R PG + PPT + P + G P GG ++
Sbjct: 273 PPPAPATLARPPG-----HPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSG 327
Query: 165 QSQPAAEGREPGEWRDLGLKEQEPVAVVEGA 195
Q P A P G+K + P VV+ A
Sbjct: 328 QPGPGAAAAAPAP----GVKAESPKRVVQAA 354
Score = 31.6 bits (70), Expect = 0.52
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 6 ASGASPSPRSSPARSHP-PAPLPFPERLPRPAA---KEPAARTPARQVFPAAASAGREGS 61
A+GA P+ +PA P AP P P RP + P +P R + PA
Sbjct: 70 AAGAGPA---APAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGP------- 119
Query: 62 AAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRP 103
AP A+ P ++ +P P A P P + +P
Sbjct: 120 -APPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKP 160
Score = 31.6 bits (70), Expect = 0.52
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 13/106 (12%)
Query: 7 SGASPSPRSSPAR-----SHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGS 61
+ A P P +PA HP P +P PAA + A PA A+ G G
Sbjct: 267 AAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA-PAPAAGGPAGV 325
Query: 62 AAPDG----ARGSTPGLAA---SRELSPPPRAPRTVPAPHPRLSPA 100
+ G A PG+ A R + P A +T+ A P + A
Sbjct: 326 SGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAA 371
Score = 30.0 bits (66), Expect = 1.5
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 9 ASPSPRSSPARSHPPAPL----PFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAP 64
A P+P ++ R P P P A EPA PA+ PAA +A P
Sbjct: 117 AGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP 176
Query: 65 DGARGSTPG 73
G PG
Sbjct: 177 GPGPGPGPG 185
Score = 28.5 bits (62), Expect = 4.4
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
Query: 41 AARTPARQVFPAAASAGREGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPA 100
A RTP + A A S +P GA G+ P +P AP P P P A
Sbjct: 44 APRTPEVRAAAAGALGNHVVSGSPAGAAGAGPA-------APAEGAPGAAPEP-PPAGRA 95
Query: 101 RRPGAEPE 108
R G P+
Sbjct: 96 RPGGGGPQ 103
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 45.8 bits (107), Expect = 3e-05
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 5 RASGASPS---PRS---SPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGR 58
R SPS PR S +RS+ P P P R P P + P R P + S R
Sbjct: 287 RTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVR 346
Query: 59 EGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENK 110
+ GS+ ++SR SPP + P+ +P PR + P A P +
Sbjct: 347 RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP-PRKTRRLSPSASPPRR 397
Score = 45.1 bits (105), Expect = 5e-05
Identities = 40/139 (28%), Positives = 54/139 (38%), Gaps = 12/139 (8%)
Query: 2 RGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGS 61
RG R SP P + RS PAP P R P P + P R+ P+
Sbjct: 543 RGRRRRSPSPPP-TRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPR------R 595
Query: 62 AAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTR 121
+P R +P R + PP P+ +P P P RR P K R S T+
Sbjct: 596 YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSP--PPKRRVSHSPPPK---QRSSPVTK 650
Query: 122 NREPGMLREAFKSAPPTGS 140
R P + + K + P+ S
Sbjct: 651 RRSPSLSSKHRKGSSPSRS 669
Score = 42.0 bits (97), Expect = 4e-04
Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Query: 10 SPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARG 69
SPSP + PP P P P P K + +P + + + R S + +G
Sbjct: 605 SPSPPPKRRTASPPPP-PKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKG 663
Query: 70 STPGLAASREL-----------SPPPRAPRTVPAPHP-----RLSPARRPGAEPENKFVA 113
S+P ++RE SP PRAP+T +P P SP RR P + +
Sbjct: 664 SSPS-RSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPI- 721
Query: 114 LRGSHKTRNREPGMLREAFKSAP 136
+R EP +++A +P
Sbjct: 722 ---RRVSRTPEPKKIKKAASPSP 741
Score = 35.8 bits (81), Expect = 0.028
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 10 SPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGA-- 67
SP R SP R PP +P P R R + R + + +++S+ S +P
Sbjct: 316 SPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPP 375
Query: 68 -RGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEP 107
R S+P +R LSP PR P P +P + P
Sbjct: 376 KRTSSPP-RKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
Score = 35.0 bits (79), Expect = 0.047
Identities = 43/128 (33%), Positives = 50/128 (39%), Gaps = 22/128 (17%)
Query: 14 RSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQV-FPAAASAGREGSAAPDGARGSTP 72
R SP+RS P+P R KE + R R+ P R S AP R TP
Sbjct: 522 RHSPSRSASPSP--------RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTP 573
Query: 73 GLAASREL-SPPPRAPRTVPAPHPRLSP--ARRPGAEPENKFVALRGSHKTRNREPGMLR 129
R SPPPR R P+P R SP RR P K +T + P R
Sbjct: 574 TPPPRRRTPSPPPR--RRSPSPR-RYSPPIQRRYSPSPPPK-------RRTASPPPPPKR 623
Query: 130 EAFKSAPP 137
A S PP
Sbjct: 624 RASPSPPP 631
Score = 30.8 bits (68), Expect = 0.89
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 6/108 (5%)
Query: 8 GASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGA 67
GAS SP+ + S P+ R P P + AA + V ++S GS P
Sbjct: 703 GASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAK 762
Query: 68 RGSTPGLAASRELSPPPRAPRTVP-----APHPRLSPARRPGAEPENK 110
+ P + SP VP +P P SP R E K
Sbjct: 763 KPPAPPSPVQSQ-SPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGK 809
Score = 30.0 bits (66), Expect = 1.5
Identities = 40/154 (25%), Positives = 54/154 (35%), Gaps = 20/154 (12%)
Query: 23 PAPLPFPE-RLPRP---AAKEPAARTPARQVFPAAASAGREGSAAPDGARGSTPGLAASR 78
P P P PE + P P + KE + + S R S +P R + SR
Sbjct: 248 PKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSR 307
Query: 79 ELSPPPR-APRTVPAPHPRLSPARRPGAEPENKF-----------VALRGSHKT----RN 122
SP R +PR P+P R P R P + +L GS + R+
Sbjct: 308 SYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRS 367
Query: 123 REPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVP 156
R P S+PP + S P R P
Sbjct: 368 RSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRP 401
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 45.4 bits (106), Expect = 4e-05
Identities = 35/94 (37%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 11 PSPRSSPARSHPPAPLP--FPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGAR 68
PSP P HP P PE P + P P + P S+ P AR
Sbjct: 126 PSPPLQPRSRHPHTRYPRAVPEATP---LRPPPGTRPRAKSRPGCRSS-------PFPAR 175
Query: 69 GSTPGLAASRELSPPPRAPRTVPAPHPRLSPARR 102
TPG A P PRAPR P HPR SPA R
Sbjct: 176 SRTPGEAGPPRGDPRPRAPR--PGDHPRRSPALR 207
Score = 37.0 bits (84), Expect = 0.012
Identities = 62/205 (30%), Positives = 74/205 (36%), Gaps = 57/205 (27%)
Query: 6 ASGASPSPRSSPARSHPP------------APLPFPERLPRPAAKEPAARTPA---RQVF 50
A+ A+ S P HPP AP P LPR A PA RT A ++
Sbjct: 43 AAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPA-RTGALAGSRLR 101
Query: 51 PAAASAGREGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSP------ARRPG 104
AAA+A + +AAP G R R P P P L P R P
Sbjct: 102 AAAAAAHDQEAAAPTGRRW------------------RRRPGPSPPLQPRSRHPHTRYPR 143
Query: 105 AEPENKFVALRGSHKTRNRE-----------PGMLREAFKSAPPTGSGYCPLSVRPGLW- 152
A PE LR TR R P R ++ PP G P + RPG
Sbjct: 144 AVPE--ATPLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDPR-PRAPRPGDHP 200
Query: 153 RRVPGGAFLLTAQSQPAAEGREPGE 177
RR P A T P + GR G+
Sbjct: 201 RRSP--ALRETPSLSPPSPGRRNGK 223
>gi|195963410 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 1 [Homo sapiens]
Length = 415
Score = 45.4 bits (106), Expect = 4e-05
Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 24/114 (21%)
Query: 1 MRGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
MRG GA P R P R PA P+P P+ A A+A R+G
Sbjct: 202 MRG----GAPPRERPKPRREDSPAGAPWPRLKPK-----------------ALAAARRQG 240
Query: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVAL 114
S P A P R P AP P P P +PA P + P + + L
Sbjct: 241 SVKPSAASHRPP---LPRAADTPGTAPAPTPTPAPAAAPALTPSSGPGSAALTL 291
Score = 28.9 bits (63), Expect = 3.4
Identities = 30/116 (25%), Positives = 38/116 (32%), Gaps = 11/116 (9%)
Query: 11 PSPRSSPARSHP-----PAPLPFPERLPRPAAK--EPAARTPARQVFPAAASAGREGSAA 63
P PR P+ P P+P P P +L K E +Q+ S
Sbjct: 139 PHPRMKPSPLTPCPPGVPSPSPPPHKLELQTLKLEELTVSELRQQLRLRGLPVSGTKSML 198
Query: 64 PDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHK 119
+ RG P RE P R AP PRL P A + SH+
Sbjct: 199 LERMRGGAP----PRERPKPRREDSPAGAPWPRLKPKALAAARRQGSVKPSAASHR 250
Score = 28.5 bits (62), Expect = 4.4
Identities = 40/152 (26%), Positives = 52/152 (34%), Gaps = 14/152 (9%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAAR-TPARQVFPAAASAGREGSAAP 64
AS P PR++ PAP P P PA + + A + A R P
Sbjct: 247 ASHRPPLPRAADTPGTAPAPTPTPAPAAAPALTPSSGPGSAALTLEEELQEAIRRAQLLP 306
Query: 65 DGARGSTPGLAASRELSPP-PRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNR 123
+ RG L E P P P P LSP+ P +E + + T +
Sbjct: 307 N--RGIDDILEDQVEPDDPLPPIPLDFPGSFDVLSPS--PDSEGLSSVFSSSLPSPTNSS 362
Query: 124 EPGMLR--------EAFKSAPPTGSGYCPLSV 147
P EA PP GSG P S+
Sbjct: 363 SPSPRDPTDSLDWLEALSGGPPLGSGPPPPSI 394
>gi|32698970 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 2 [Homo sapiens]
Length = 312
Score = 45.4 bits (106), Expect = 4e-05
Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 24/114 (21%)
Query: 1 MRGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREG 60
MRG GA P R P R PA P+P P+ A A+A R+G
Sbjct: 99 MRG----GAPPRERPKPRREDSPAGAPWPRLKPK-----------------ALAAARRQG 137
Query: 61 SAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVAL 114
S P A P R P AP P P P +PA P + P + + L
Sbjct: 138 SVKPSAASHRPP---LPRAADTPGTAPAPTPTPAPAAAPALTPSSGPGSAALTL 188
Score = 28.9 bits (63), Expect = 3.4
Identities = 30/116 (25%), Positives = 38/116 (32%), Gaps = 11/116 (9%)
Query: 11 PSPRSSPARSHP-----PAPLPFPERLPRPAAK--EPAARTPARQVFPAAASAGREGSAA 63
P PR P+ P P+P P P +L K E +Q+ S
Sbjct: 36 PHPRMKPSPLTPCPPGVPSPSPPPHKLELQTLKLEELTVSELRQQLRLRGLPVSGTKSML 95
Query: 64 PDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHK 119
+ RG P RE P R AP PRL P A + SH+
Sbjct: 96 LERMRGGAP----PRERPKPRREDSPAGAPWPRLKPKALAAARRQGSVKPSAASHR 147
Score = 28.5 bits (62), Expect = 4.4
Identities = 40/152 (26%), Positives = 52/152 (34%), Gaps = 14/152 (9%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAAR-TPARQVFPAAASAGREGSAAP 64
AS P PR++ PAP P P PA + + A + A R P
Sbjct: 144 ASHRPPLPRAADTPGTAPAPTPTPAPAAAPALTPSSGPGSAALTLEEELQEAIRRAQLLP 203
Query: 65 DGARGSTPGLAASRELSPP-PRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNR 123
+ RG L E P P P P LSP+ P +E + + T +
Sbjct: 204 N--RGIDDILEDQVEPDDPLPPIPLDFPGSFDVLSPS--PDSEGLSSVFSSSLPSPTNSS 259
Query: 124 EPGMLR--------EAFKSAPPTGSGYCPLSV 147
P EA PP GSG P S+
Sbjct: 260 SPSPRDPTDSLDWLEALSGGPPLGSGPPPPSI 291
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 45.1 bits (105), Expect = 5e-05
Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 10 SPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAAS-AGREGSAAPDGAR 68
+P+P + PA S PP P P PE P P+ A P+ V ++S G G+A+ G++
Sbjct: 445 TPAPVAMPA-SPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQ 503
Query: 69 GST-------PGLAASRELSPPPRAPRTVP-APHPRLSPARRPGAEPENKFVALRGSHKT 120
++ P RE PPP P P +P +SPA G +G +
Sbjct: 504 AASVITYTAPPRPPKKREYPPPPPEPAATPTSPATAVSPATAAGPAMATTTEEAKGRNPR 563
Query: 121 RNREPGMLREAF-----KSAPPTGSGYCP 144
R + PPTG+G P
Sbjct: 564 AGRTLTYTAKPVGGIGGGGGPPTGAGRGP 592
Score = 33.1 bits (74), Expect = 0.18
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 13/115 (11%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAAS---AGREGSA 62
AS +S S SSP + PPA P P L P A ++ A + G +G+A
Sbjct: 101 ASSSSSSSSSSPPPASPPASSP-PRVLELPGVPAAAFSDVLNFIYSARLALPGGGGDGAA 159
Query: 63 APD-GARGSTPGLAASRELS-------PPPRAPRTVPAP-HPRLSPARRPGAEPE 108
+ GA G G++ + L PP AP P P RP E E
Sbjct: 160 VAEIGALGRRLGISRLQGLGEGGDAWVPPTPAPMATSQPEEDSFGPGPRPAGEWE 214
Score = 32.0 bits (71), Expect = 0.40
Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 20/93 (21%)
Query: 11 PSPRSSPARSHP--------PAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSA 62
P+ RS A S P APLP P AA PA T AAS+ S+
Sbjct: 42 PAHRSVLAASSPFFREALLTSAPLPLPPATGG-AAPNPATTT--------AASSSSSSSS 92
Query: 63 APDGARGSTPGLAASRELSPPPRAPRTVPAPHP 95
+ + S ++S SPPP +P PA P
Sbjct: 93 SSSSSSSSASSSSSSSSSSPPPASP---PASSP 122
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 45.1 bits (105), Expect = 5e-05
Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 10 SPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAAS-AGREGSAAPDGAR 68
+P+P + PA S PP P P PE P P+ A P+ V ++S G G+A+ G++
Sbjct: 445 TPAPVAMPA-SPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQ 503
Query: 69 GST-------PGLAASRELSPPPRAPRTVP-APHPRLSPARRPGAEPENKFVALRGSHKT 120
++ P RE PPP P P +P +SPA G +G +
Sbjct: 504 AASVITYTAPPRPPKKREYPPPPPEPAATPTSPATAVSPATAAGPAMATTTEEAKGRNPR 563
Query: 121 RNREPGMLREAF-----KSAPPTGSGYCP 144
R + PPTG+G P
Sbjct: 564 AGRTLTYTAKPVGGIGGGGGPPTGAGRGP 592
Score = 33.1 bits (74), Expect = 0.18
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 13/115 (11%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAAS---AGREGSA 62
AS +S S SSP + PPA P P L P A ++ A + G +G+A
Sbjct: 101 ASSSSSSSSSSPPPASPPASSP-PRVLELPGVPAAAFSDVLNFIYSARLALPGGGGDGAA 159
Query: 63 APD-GARGSTPGLAASRELS-------PPPRAPRTVPAP-HPRLSPARRPGAEPE 108
+ GA G G++ + L PP AP P P RP E E
Sbjct: 160 VAEIGALGRRLGISRLQGLGEGGDAWVPPTPAPMATSQPEEDSFGPGPRPAGEWE 214
Score = 32.0 bits (71), Expect = 0.40
Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 20/93 (21%)
Query: 11 PSPRSSPARSHP--------PAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSA 62
P+ RS A S P APLP P AA PA T AAS+ S+
Sbjct: 42 PAHRSVLAASSPFFREALLTSAPLPLPPATGG-AAPNPATTT--------AASSSSSSSS 92
Query: 63 APDGARGSTPGLAASRELSPPPRAPRTVPAPHP 95
+ + S ++S SPPP +P PA P
Sbjct: 93 SSSSSSSSASSSSSSSSSSPPPASP---PASSP 122
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 45.1 bits (105), Expect = 5e-05
Identities = 49/187 (26%), Positives = 68/187 (36%), Gaps = 29/187 (15%)
Query: 3 GLRASGASPS--PRSSPARSHPPAPLPFPER-LPRPAA-------------KEPAARTPA 46
G + S A PS P + PA P P P PE+ L PAA E + T +
Sbjct: 533 GRKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSGLGLQPGPERTSTTKS 592
Query: 47 RQVFPAAASAGREGSAAPDGARGSTPGL--AASRELSPPPRAPRTVPAPHPRLSPARRPG 104
+++ P +A G GS+ G+ PG A SP P P +PH +++
Sbjct: 593 KELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGASPSPSQPPADQSPHTLRKVSKKLA 652
Query: 105 AEPENKFVALRGSHKTRNREPGMLREAFKSAP-PTGSGYCPLSVRPGLWRRVPGGAFLLT 163
P K +PG + + P P P S P G L +
Sbjct: 653 PIPP----------KVPFGQPGAMADQSAGQPSPVSLSPTPPSTPSPYGLSYPQGYSLAS 702
Query: 164 AQSQPAA 170
Q PAA
Sbjct: 703 GQLSPAA 709
Score = 33.5 bits (75), Expect = 0.14
Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 24/121 (19%)
Query: 8 GASPSPRSSPARSHPP---------APLPFPERLPRPAAKEPAARTPARQVFPAAASAGR 58
GASPSP PA P AP+P +P A A A Q P + S
Sbjct: 627 GASPSPSQPPADQSPHTLRKVSKKLAPIPPKVPFGQPGAM---ADQSAGQPSPVSLSPTP 683
Query: 59 EGSAAPDGARGSTPGLAASRELSP---PPRAPRTV---------PAPHPRLSPARRPGAE 106
+ +P G AS +LSP PP A +V P P PR P P
Sbjct: 684 PSTPSPYGLSYPQGYSLASGQLSPAAAPPLASPSVFTSTLSKSRPTPKPRQRPTLPPPQP 743
Query: 107 P 107
P
Sbjct: 744 P 744
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 45.1 bits (105), Expect = 5e-05
Identities = 51/169 (30%), Positives = 60/169 (35%), Gaps = 31/169 (18%)
Query: 4 LRASGASPSPRSSPARSH----PPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGRE 59
L G PR+ A PP+PLP P PRP A TPA +F +
Sbjct: 414 LNGEGLQSPPRAQSAPPEAAVLPPSPLPAPVASPRPFQPGGGAPTPAPSIFNRS------ 467
Query: 60 GSAAPDGARGSTPGLAASRELSPP----PRAPRTVPAPHPRLSPARRP-----GAEPENK 110
AR TPGL R + P AP+ LSPA P G P
Sbjct: 468 -------ARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPS 520
Query: 111 FVALRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGA 159
F + SH + P R + T S Y P RP PGGA
Sbjct: 521 FTSGVPSHAPVSGSPSTPRSS-GPVTATSSLYIPAPSRP----VTPGGA 564
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 12 SPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGST 71
+P++ P + P P P + P P A +P +R + AAS+ G P +G
Sbjct: 702 TPKTPPPMA-PKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAASSA--GIPEPPRLQGRG 758
Query: 72 PGLAASRE---------------LSPPPRAPRTVPAPHP 95
L A R+ L P PR+P P+ P
Sbjct: 759 GELFAKRQSRADRYVVEGTPGPGLGPRPRSPSPTPSLPP 797
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 45.1 bits (105), Expect = 5e-05
Identities = 51/169 (30%), Positives = 60/169 (35%), Gaps = 31/169 (18%)
Query: 4 LRASGASPSPRSSPARSH----PPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGRE 59
L G PR+ A PP+PLP P PRP A TPA +F +
Sbjct: 190 LNGEGLQSPPRAQSAPPEAAVLPPSPLPAPVASPRPFQPGGGAPTPAPSIFNRS------ 243
Query: 60 GSAAPDGARGSTPGLAASRELSPP----PRAPRTVPAPHPRLSPARRP-----GAEPENK 110
AR TPGL R + P AP+ LSPA P G P
Sbjct: 244 -------ARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPS 296
Query: 111 FVALRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGA 159
F + SH + P R + T S Y P RP PGGA
Sbjct: 297 FTSGVPSHAPVSGSPSTPRSS-GPVTATSSLYIPAPSRP----VTPGGA 340
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 12 SPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGST 71
+P++ P + P P P + P P A +P +R + AAS+ G P +G
Sbjct: 478 TPKTPPPMA-PKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAASSA--GIPEPPRLQGRG 534
Query: 72 PGLAASRE---------------LSPPPRAPRTVPAPHP 95
L A R+ L P PR+P P+ P
Sbjct: 535 GELFAKRQSRADRYVVEGTPGPGLGPRPRSPSPTPSLPP 573
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Query: 14 RSSPARSHPPAPL--PFPERLPRPAAKEPAARTPARQV-----FPAAASAGREGSAAPDG 66
R +PA +HPPAP P RL AA +P R+P Q + + AP
Sbjct: 49 RPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAV 108
Query: 67 ARGSTPGLAASRELSPPPRAPRTVPAPH-PRLSPARRPGAEPENKFVALRGSHKTRNRE 124
+PG +R SPPPR P PH P L P+ P +GS R +E
Sbjct: 109 PAAPSPGPLPARPSSPPPR-PSLPSGPHRPVLPPSALAAPRPPLARPLPQGSVTAREQE 166
Score = 39.3 bits (90), Expect = 0.003
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 13 PRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGSTP 72
PR +PA P+P P P R P + P R V P +A A + P AR
Sbjct: 102 PRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALA----APRPPLARPLPQ 157
Query: 73 GLAASRELSPPPRAPRTVPAP 93
G +RE PR+ R AP
Sbjct: 158 GSVTAREQEQRPRSRRRAGAP 178
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Query: 14 RSSPARSHPPAP--LPFPERLPRPAAKEPAARTPARQ-----VFPAAASAGREGSAAPDG 66
R +PA +HPPAP P RL AA +P R+P Q + + AP
Sbjct: 49 RPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAV 108
Query: 67 ARGSTPGLAASRELSPPPRAPRTVPAPH-PRLSPARRPGAEPENKFVALRGSHKTRNRE 124
+PG +R SPPPR P PH P L P+ P +GS R +E
Sbjct: 109 PAAPSPGPLPARPSSPPPR-PSLPSGPHRPVLPPSALAAPRPPLARPLPQGSVTAREQE 166
Score = 40.8 bits (94), Expect = 9e-04
Identities = 37/124 (29%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 13 PRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGSTP 72
PR +PA P+P P P R P + P R V P +A A + P AR
Sbjct: 102 PRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALA----APRPPLARPLPQ 157
Query: 73 GLAASRELSPPPRAPRTVPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLREAF 132
G +RE PR+ R AP L PA + + GS + N G+L
Sbjct: 158 GSVTAREQEQRPRSRRRAGAPE-ALGPAL-------TRIHNVEGSKDSWNCGQGLLLLML 209
Query: 133 KSAP 136
+AP
Sbjct: 210 SAAP 213
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 44.7 bits (104), Expect = 6e-05
Identities = 40/129 (31%), Positives = 42/129 (32%), Gaps = 33/129 (25%)
Query: 9 ASPSPRSSPARSHPPAPLPFPE------RLPRPAA---KEPAARTPARQVFPAAASAGRE 59
A P P P HPP P R P PAA + P P RQ A+A R
Sbjct: 44 APPRPGEEPGNRHPPPPAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQRADEGAAAARP 103
Query: 60 ------GSAAPDGARGSTPGLAASRELSPPPRAPRTV------------------PAPHP 95
P A PG A R PPP P PAP P
Sbjct: 104 ERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPSPAPAP 163
Query: 96 RLSPARRPG 104
R PA RPG
Sbjct: 164 RSRPAPRPG 172
Score = 32.3 bits (72), Expect = 0.31
Identities = 31/94 (32%), Positives = 35/94 (37%), Gaps = 33/94 (35%)
Query: 2 RGLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGS 61
R L S A+P+P R PP P P PER P PA + G S
Sbjct: 111 RRLPGSAAAPAPGRDALRLPPPPPPP-PERPRLP---------------PAGLAGGPADS 154
Query: 62 AAPDGARGSTPGLAASRELSPPPRAPRTVPAPHP 95
A P SP P APR+ PAP P
Sbjct: 155 APP----------------SPAP-APRSRPAPRP 171
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 44.3 bits (103), Expect = 8e-05
Identities = 45/157 (28%), Positives = 61/157 (38%), Gaps = 15/157 (9%)
Query: 9 ASPSPRSSPARSHPPAPLPFPERLPRP----AAKEPAARTPARQVFPAAASAGREGSAAP 64
ASP R S + P P P P P A P R PA V P + G GS P
Sbjct: 263 ASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRP 322
Query: 65 DGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSPARRPG---AEPENKFVALRGSHKTR 121
+ S A+S P AP P P + P+ PG P + + S +
Sbjct: 323 WKSNPS----ASSGPWKPAKPAPSVSPGPWKPI-PSVSPGPWKPTPSVSSASWKSSSVSP 377
Query: 122 N--REPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVP 156
+ + P E++KS PP P ++ P W+ VP
Sbjct: 378 SSWKSPPASPESWKSGPPELRKTAP-TLSPEHWKAVP 413
Score = 42.0 bits (97), Expect = 4e-04
Identities = 54/214 (25%), Positives = 77/214 (35%), Gaps = 53/214 (24%)
Query: 9 ASPSPRSSPARSHPPAPLP---FPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPD 65
A SP S A P P FPE L P+A P + A P G +A+P+
Sbjct: 211 APVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEP----WGPSPAASPE 266
Query: 66 GARGSTPGLAASRELSPPPRAPRTVPAPH-----PRLSPARR---PGAEPENKFVALRGS 117
+ ++R SP PR P +P P +SP R P P + GS
Sbjct: 267 SRK-------SARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGS 319
Query: 118 HKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGREPGE 177
+ P +K A P SV PG W+ +P + PG
Sbjct: 320 PRPWKSNPSASSGPWKPAKPAP------SVSPGPWKPIPSVS---------------PGP 358
Query: 178 WRDLGLKEQEPVAVVEGAAWRRRLMSVAPAGCRA 211
W+ P V A+W+ SV+P+ ++
Sbjct: 359 WK--------PTPSVSSASWKS--SSVSPSSWKS 382
Score = 37.0 bits (84), Expect = 0.012
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 22/183 (12%)
Query: 9 ASPSPRSSPARSHPPAPL-------PFPERLPRPAAKEPAARTPARQVFPAAASAGREGS 61
++PS S P + PAP P P P P P+ + + + + S+ +
Sbjct: 325 SNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPP 384
Query: 62 AAPDGARGSTPGLAASRE-LSP------PPRAPRTVPAPHPRLSPA-RRPGAEPENKFVA 113
A+P+ + P L + LSP PP +P + P P LSP R P PE + +
Sbjct: 385 ASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPE-LRKPGPPLSPEIRSPAGSPELRKPS 443
Query: 114 LRGSHKTRNREPGMLREAFKSAPPTGSGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAEGR 173
GS P + + S S P LW+ +F + Q E R
Sbjct: 444 --GSPDLWKLSPDQRKTSPASLDFPESQKSSRGGSPDLWK----SSFFIEPQKPVFPETR 497
Query: 174 EPG 176
+PG
Sbjct: 498 KPG 500
Score = 27.7 bits (60), Expect = 7.6
Identities = 55/214 (25%), Positives = 73/214 (34%), Gaps = 54/214 (25%)
Query: 5 RASGASPSPRSSPA------RSHPP-----APLPFPERLPRPAAKEPAARTPARQVFPAA 53
++S SPS SP +S PP AP PE P R P + P
Sbjct: 371 KSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEI 430
Query: 54 ASAG-----REGSAAPD-----------------------GARGSTPGLAASRELSPP-- 83
S R+ S +PD +RG +P L S P
Sbjct: 431 RSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQKSSRGGSPDLWKSSFFIEPQK 490
Query: 84 PRAPRT-VPAPHPRLSPARRPGAEPENKFVALRGSHKTRNREPGMLREAFKSAPPTG--- 139
P P T P P P+ P A + L S T R+P + E K+APP
Sbjct: 491 PVFPETRKPGPS---GPSESPKAASDIWKPVL--SIDTEPRKPALFPEPAKTAPPASPEA 545
Query: 140 --SGYCPLSVRPGLWRRVPGGAFLLTAQSQPAAE 171
P + L+ +P A L ++SQ A E
Sbjct: 546 RKRALFPEPRKHALFPELPKSA--LFSESQKAVE 577
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 9 ASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAAS--AGREGSAAPDG 66
A+P+P +PA + PAP P P+ P+ +A E A R P A +G G A
Sbjct: 185 AAPAPAPAPAPAPAPAPAPAPDAAPQESA-EQGANQGQRGQEPLADQLHSGISGRPAAGT 243
Query: 67 ARGSTPGLA-------------ASRELSPPPRAPRTVPAPHPRLSPARRPG 104
A S G A A R+ S P ++ VPAP P SP+ PG
Sbjct: 244 AAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCP--SPSAAPG 292
Score = 41.2 bits (95), Expect = 7e-04
Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPD 65
A + SP PA PE+LP PA+ P V A + AAP
Sbjct: 99 AVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPV 158
Query: 66 GARGSTPGLAASRELSPPPR---------APRTVPAPHPRLSPARRPGAEPENKFVALRG 116
A + LA + +P P AP PAP P +PA P A P+ A +G
Sbjct: 159 AAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQES--AEQG 216
Query: 117 SHK-TRNREP--GMLREAFKSAPPTGS 140
+++ R +EP L P G+
Sbjct: 217 ANQGQRGQEPLADQLHSGISGRPAAGT 243
Score = 31.2 bits (69), Expect = 0.68
Identities = 27/76 (35%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 33 PRPAAKEPAARTPARQVFPAAASA-GREGSAAPDGARGSTPGLAASRELSPPPRAPRTVP 91
PRP A A P PAA S G E AP+ P + S PP P P
Sbjct: 95 PRPVAVAVAVSPPLE---PAAESLDGLE--EAPE----QLPSVPVPAPASTPPPVPVLAP 145
Query: 92 APHPRLSPARRPGAEP 107
AP P +P P A P
Sbjct: 146 APAPAPAPVAAPVAAP 161
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 9 ASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAAS--AGREGSAAPDG 66
A+P+P +PA + PAP P P+ P+ +A E A R P A +G G A
Sbjct: 185 AAPAPAPAPAPAPAPAPAPAPDAAPQESA-EQGANQGQRGQEPLADQLHSGISGRPAAGT 243
Query: 67 ARGSTPGLA-------------ASRELSPPPRAPRTVPAPHPRLSPARRPG 104
A S G A A R+ S P ++ VPAP P SP+ PG
Sbjct: 244 AAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCP--SPSAAPG 292
Score = 41.2 bits (95), Expect = 7e-04
Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPD 65
A + SP PA PE+LP PA+ P V A + AAP
Sbjct: 99 AVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPV 158
Query: 66 GARGSTPGLAASRELSPPPR---------APRTVPAPHPRLSPARRPGAEPENKFVALRG 116
A + LA + +P P AP PAP P +PA P A P+ A +G
Sbjct: 159 AAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQES--AEQG 216
Query: 117 SHK-TRNREP--GMLREAFKSAPPTGS 140
+++ R +EP L P G+
Sbjct: 217 ANQGQRGQEPLADQLHSGISGRPAAGT 243
Score = 31.2 bits (69), Expect = 0.68
Identities = 27/76 (35%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 33 PRPAAKEPAARTPARQVFPAAASA-GREGSAAPDGARGSTPGLAASRELSPPPRAPRTVP 91
PRP A A P PAA S G E AP+ P + S PP P P
Sbjct: 95 PRPVAVAVAVSPPLE---PAAESLDGLE--EAPE----QLPSVPVPAPASTPPPVPVLAP 145
Query: 92 APHPRLSPARRPGAEP 107
AP P +P P A P
Sbjct: 146 APAPAPAPVAAPVAAP 161
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 18/111 (16%)
Query: 9 ASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAAS--AGREGSAAPDG 66
A+P+P +PA + PAP P P+ P+ +A E A R P A +G G A
Sbjct: 196 AAPAPAPAPAPAPAPAPAPAPDAAPQESA-EQGANQGQRGQEPLADQLHSGISGRPAAGT 254
Query: 67 ARGSTPGLA-------------ASRELSPPPRAPRTVPAPHPRLSPARRPG 104
A S G A A R+ S P ++ VPAP P SP+ PG
Sbjct: 255 AAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCP--SPSAAPG 303
Score = 41.2 bits (95), Expect = 7e-04
Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 6 ASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPD 65
A + SP PA PE+LP PA+ P V A + AAP
Sbjct: 110 AVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPV 169
Query: 66 GARGSTPGLAASRELSPPPR---------APRTVPAPHPRLSPARRPGAEPENKFVALRG 116
A + LA + +P P AP PAP P +PA P A P+ A +G
Sbjct: 170 AAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQES--AEQG 227
Query: 117 SHK-TRNREP--GMLREAFKSAPPTGS 140
+++ R +EP L P G+
Sbjct: 228 ANQGQRGQEPLADQLHSGISGRPAAGT 254
Score = 31.2 bits (69), Expect = 0.68
Identities = 27/76 (35%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 33 PRPAAKEPAARTPARQVFPAAASA-GREGSAAPDGARGSTPGLAASRELSPPPRAPRTVP 91
PRP A A P PAA S G E AP+ P + S PP P P
Sbjct: 106 PRPVAVAVAVSPPLE---PAAESLDGLE--EAPE----QLPSVPVPAPASTPPPVPVLAP 156
Query: 92 APHPRLSPARRPGAEP 107
AP P +P P A P
Sbjct: 157 APAPAPAPVAAPVAAP 172
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,169,988
Number of Sequences: 37866
Number of extensions: 845029
Number of successful extensions: 12060
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 1454
Number of HSP's that attempted gapping in prelim test: 6405
Number of HSP's gapped (non-prelim): 5309
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.