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Search of human proteins with 239753002
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753002 PREDICTED: hypothetical protein [Homo sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753002 PREDICTED: hypothetical protein [Homo sapiens] 291 9e-80
gi|239754979 PREDICTED: hypothetical protein [Homo sapiens] 32 0.23
gi|239754472 PREDICTED: hypothetical protein [Homo sapiens] 31 0.30
gi|239749029 PREDICTED: hypothetical protein [Homo sapiens] 31 0.30
gi|239743045 PREDICTED: hypothetical protein XP_002342699 [Homo ... 31 0.30
gi|119703744 desmoglein 1 preproprotein [Homo sapiens] 31 0.30
gi|57864582 hornerin [Homo sapiens] 31 0.39
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 30 0.86
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 30 0.86
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 30 0.86
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 30 0.86
gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [H... 29 1.1
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 29 1.5
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 29 1.5
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 29 1.5
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 29 1.5
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ... 28 1.9
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 28 1.9
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 28 1.9
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 28 1.9
gi|195972866 keratin 10 [Homo sapiens] 28 1.9
gi|163644316 hypothetical protein LOC23255 [Homo sapiens] 28 1.9
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 28 2.5
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 28 2.5
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 28 2.5
gi|222136585 timeless homolog [Homo sapiens] 28 3.3
gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens] 28 3.3
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 28 3.3
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H... 27 4.3
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 27 4.3
>gi|239753002 PREDICTED: hypothetical protein [Homo sapiens]
Length = 141
Score = 291 bits (746), Expect = 9e-80
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MAAAYPIRLSSLPLRAPPYPLQESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTV 60
MAAAYPIRLSSLPLRAPPYPLQESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTV
Sbjct: 1 MAAAYPIRLSSLPLRAPPYPLQESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTV 60
Query: 61 GGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDW 120
GGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDW
Sbjct: 61 GGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDW 120
Query: 121 QEAAKRHQPVSQKPHRRHTAR 141
QEAAKRHQPVSQKPHRRHTAR
Sbjct: 121 QEAAKRHQPVSQKPHRRHTAR 141
>gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 780
Score = 31.6 bits (70), Expect = 0.23
Identities = 39/98 (39%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 6 PIRLSSLPLRAPPY------PLQESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLL--- 56
P+ LSS R P PL PS G E ++RV L R TG GLL
Sbjct: 217 PLGLSSCLRRKEPLRKTSMGPL--GPSSAGPAFGDSPE-MVRVRLPLRSGTGGTGLLLRS 273
Query: 57 --GGT-----VGGRGGVS--GGEEWRRAKRKREIGRSD 85
GGT GGRG S G EW A+RKRE RS+
Sbjct: 274 GTGGTGLPLRSGGRGLSSPCGDVEWLWAERKREGRRSE 311
>gi|239754472 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 31.2 bits (69), Expect = 0.30
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 70 EEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDWQEAAKRHQP 129
E R+ + G++ +G+ RS GV GG G P RRR ++E + P
Sbjct: 70 EPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRSP 129
Query: 130 VSQK 133
VSQ+
Sbjct: 130 VSQQ 133
Score = 30.0 bits (66), Expect = 0.66
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 8 RLSSLPLRA---PPYPLQESPSVHGEGLQRRGEGVLRVTLYA-RGKTGVEGLLGGTVGGR 63
RLS +P RA PP P+++ S + G + ++R A RG++ G+ GG G R
Sbjct: 56 RLSLIPKRAAELPPEPIRKPRSGNPTG-----KAIIRGQRRALRGRSAAAGVRGGPCGSR 110
Query: 64 GGVSGGEEWRRAKRKRE 80
GV+ RR + RE
Sbjct: 111 PGVT-----RRRRSFRE 122
>gi|239749029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 31.2 bits (69), Expect = 0.30
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 70 EEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDWQEAAKRHQP 129
E R+ + G++ +G+ RS GV GG G P RRR ++E + P
Sbjct: 70 EPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRSP 129
Query: 130 VSQK 133
VSQ+
Sbjct: 130 VSQQ 133
Score = 30.0 bits (66), Expect = 0.66
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 8 RLSSLPLRA---PPYPLQESPSVHGEGLQRRGEGVLRVTLYA-RGKTGVEGLLGGTVGGR 63
RLS +P RA PP P+++ S + G + ++R A RG++ G+ GG G R
Sbjct: 56 RLSLIPKRAAELPPEPIRKPRSGNPTG-----KAIIRGQRRALRGRSAAAGVRGGPCGSR 110
Query: 64 GGVSGGEEWRRAKRKRE 80
GV+ RR + RE
Sbjct: 111 PGVT-----RRRRSFRE 122
>gi|239743045 PREDICTED: hypothetical protein XP_002342699 [Homo
sapiens]
Length = 139
Score = 31.2 bits (69), Expect = 0.30
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 70 EEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDWQEAAKRHQP 129
E R+ + G++ +G+ RS GV GG G P RRR ++E + P
Sbjct: 70 EPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRSP 129
Query: 130 VSQK 133
VSQ+
Sbjct: 130 VSQQ 133
Score = 30.0 bits (66), Expect = 0.66
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 8 RLSSLPLRA---PPYPLQESPSVHGEGLQRRGEGVLRVTLYA-RGKTGVEGLLGGTVGGR 63
RLS +P RA PP P+++ S + G + ++R A RG++ G+ GG G R
Sbjct: 56 RLSLIPKRAAELPPEPIRKPRSGNPTG-----KAIIRGQRRALRGRSAAAGVRGGPCGSR 110
Query: 64 GGVSGGEEWRRAKRKRE 80
GV+ RR + RE
Sbjct: 111 PGVT-----RRRRSFRE 122
>gi|119703744 desmoglein 1 preproprotein [Homo sapiens]
Length = 1049
Score = 31.2 bits (69), Expect = 0.30
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 17/78 (21%)
Query: 51 GVEGLLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSF-GLGVPGGGIGI 109
GV G+ G T G+SGG IG S G S + G G+ GGGIG+
Sbjct: 960 GVTGISGTT-----GISGG-----------IGSSGLVGTSMGAGSGALSGAGISGGGIGL 1003
Query: 110 APLRGRRRVDWQEAAKRH 127
+ L G + ++ H
Sbjct: 1004 SSLGGTASIGHMRSSSDH 1021
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 30.8 bits (68), Expect = 0.39
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 23 ESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIG 82
ES S H GL R + + Y G+ G T G G SG + + G
Sbjct: 1511 ESGSSHSSGLGHRESRSGQSSGY--GQHGSSSGHSSTHGQHGSTSG-QSSSCGQHGASSG 1567
Query: 83 RSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRR 116
+S G+ +S+S G G G G G +P G+R
Sbjct: 1568 QSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 1601
Score = 30.4 bits (67), Expect = 0.50
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 23 ESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIG 82
ES S H GL R + + Y G+ G T G G SG + + G
Sbjct: 1041 ESGSGHSSGLGHRESRSGQSSGY--GQHGSSSGHSSTHGQHGSTSG-QSSSCGQHGASSG 1097
Query: 83 RSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRR 116
+S G+ +S+S G G G G G +P G+R
Sbjct: 1098 QSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 1131
Score = 30.4 bits (67), Expect = 0.50
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 23 ESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIG 82
ES S H GL R + + Y G+ G T G G SG + + G
Sbjct: 1981 ESGSGHSSGLGHRESRSGQSSGY--GQHGSSSGHSSTHGQHGSASG-QSSSCGQHGASSG 2037
Query: 83 RSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRR 116
+S G+ +S+S G G G G G +P G+R
Sbjct: 2038 QSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 2071
Score = 30.4 bits (67), Expect = 0.50
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 23 ESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIG 82
ES S H GL R + + Y G+ G T G G SG + + G
Sbjct: 2451 ESGSGHSSGLGHRESRSGQSSGY--GQHGSSSGHSSTHGQHGSTSG-QSSSCGQHGASSG 2507
Query: 83 RSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRR 116
+S G+ +S+S G G G G G +P G+R
Sbjct: 2508 QSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 2541
Score = 29.6 bits (65), Expect = 0.86
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 23 ESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIG 82
ES S H GL + + + Y G+ G T G G SG + + G
Sbjct: 575 ESGSGHSSGLGHQESRSGQSSGY--GQHGSSSGHSSTHGQHGSTSG-QSSSCGQHGATSG 631
Query: 83 RSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDWQEAAKRHQ 128
+S G+ +S+S G G G G +P RGR D+ ++ Q
Sbjct: 632 QSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQ 677
Score = 29.6 bits (65), Expect = 0.86
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGR 115
G+ G G+ R + G S + G+ + +S G G G G G +P RGR
Sbjct: 2134 GQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGR 2187
Score = 28.5 bits (62), Expect = 1.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGR 115
G+ G G+ R + G S G+ + +S G G G G G +P RGR
Sbjct: 1194 GQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGR 1247
Score = 28.5 bits (62), Expect = 1.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGR 115
G+ G + G+ + G+S G +S+S G G G G G +P RGR
Sbjct: 1311 GQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGR 1364
Score = 28.5 bits (62), Expect = 1.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGR 115
G+ G + G+ + G+S G+ +S+S G G G G +P RGR
Sbjct: 1781 GQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGR 1834
Score = 28.5 bits (62), Expect = 1.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGR 115
G+ G + G+ + G+S G+ +S+S G G G G +P RGR
Sbjct: 2251 GQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGR 2304
Score = 28.5 bits (62), Expect = 1.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGR 115
G+ G G+ R + G S G+ + +S G G G G G +P RGR
Sbjct: 2604 GQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGR 2657
Score = 27.7 bits (60), Expect = 3.3
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRR 116
GR G + G+ + G+S G+ + + G G G G G +P G+R
Sbjct: 842 GRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQR 896
Score = 26.6 bits (57), Expect = 7.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 62 GRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGR 115
G+ G G+ R + S + G+ + +S G G G G G +P RGR
Sbjct: 1664 GQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGR 1717
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 29.6 bits (65), Expect = 0.86
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 33/124 (26%)
Query: 26 SVHGEGLQRR-GEGVL----RVTL--YARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRK 78
SV G G++RR EG RV L +A + G GG GG G + RR
Sbjct: 475 SVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRV--- 531
Query: 79 REIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRV----DWQEAAKRHQPVSQKP 134
+G+ + E G+G A RGRR + + RHQP +P
Sbjct: 532 --VGQGQVRWE----------------GVGQAA-RGRRMAHHCSQGRNSQSRHQPGRDRP 572
Query: 135 HRRH 138
H H
Sbjct: 573 HHHH 576
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 29.6 bits (65), Expect = 0.86
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 33/124 (26%)
Query: 26 SVHGEGLQRR-GEGVL----RVTL--YARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRK 78
SV G G++RR EG RV L +A + G GG GG G + RR
Sbjct: 148 SVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRV--- 204
Query: 79 REIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRV----DWQEAAKRHQPVSQKP 134
+G+ + E G+G A RGRR + + RHQP +P
Sbjct: 205 --VGQGQVRWE----------------GVGQAA-RGRRMAHHCSQGRNSQSRHQPGRDRP 245
Query: 135 HRRH 138
H H
Sbjct: 246 HHHH 249
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 29.6 bits (65), Expect = 0.86
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 33/124 (26%)
Query: 26 SVHGEGLQRR-GEGVL----RVTL--YARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRK 78
SV G G++RR EG RV L +A + G GG GG G + RR
Sbjct: 148 SVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRV--- 204
Query: 79 REIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRV----DWQEAAKRHQPVSQKP 134
+G+ + E G+G A RGRR + + RHQP +P
Sbjct: 205 --VGQGQVRWE----------------GVGQAA-RGRRMAHHCSQGRNSQSRHQPGRDRP 245
Query: 135 HRRH 138
H H
Sbjct: 246 HHHH 249
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 29.6 bits (65), Expect = 0.86
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 33/124 (26%)
Query: 26 SVHGEGLQRR-GEGVL----RVTL--YARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRK 78
SV G G++RR EG RV L +A + G GG GG G + RR
Sbjct: 148 SVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRV--- 204
Query: 79 REIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRV----DWQEAAKRHQPVSQKP 134
+G+ + E G+G A RGRR + + RHQP +P
Sbjct: 205 --VGQGQVRWE----------------GVGQAA-RGRRMAHHCSQGRNSQSRHQPGRDRP 245
Query: 135 HRRH 138
H H
Sbjct: 246 HHHH 249
>gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 29.3 bits (64), Expect = 1.1
Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 19/116 (16%)
Query: 7 IRLSSLPLRAPPYPLQESPSVHGEG------LQRRGEGV-LRVTLYARGKTGVEGLLGGT 59
I S++ R P P Q P EG L RG GV +G G G L
Sbjct: 55 IAASAVGARGGPGPAQ-GPQREEEGAPGCRSLVGRGWGVGWAAVAEVQGTVGERGALAFG 113
Query: 60 VGGRG----GVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAP 111
GGRG GV G E + RK + GRS + G + FG G G + + P
Sbjct: 114 -GGRGLLAAGVGGAEGGCQVTRKIKRGRSKEGGGSW------FGAGKETGEVSLLP 162
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 28.9 bits (63), Expect = 1.5
Identities = 28/82 (34%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 29 GEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKG 88
G G R G G R Y + G G GG G RGG G R R D+ G
Sbjct: 475 GYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGG 534
Query: 89 EDFECNSRSFGLG--VPGGGIG 108
RS G G GGG G
Sbjct: 535 GSGYGGDRSGGYGGDRSGGGYG 556
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 28.9 bits (63), Expect = 1.5
Identities = 28/82 (34%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 29 GEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKG 88
G G R G G R Y + G G GG G RGG G R R D+ G
Sbjct: 478 GYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGG 537
Query: 89 EDFECNSRSFGLG--VPGGGIG 108
RS G G GGG G
Sbjct: 538 GSGYGGDRSGGYGGDRSGGGYG 559
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 28.9 bits (63), Expect = 1.5
Identities = 37/119 (31%), Positives = 43/119 (36%), Gaps = 39/119 (32%)
Query: 13 PLRAPPYPLQESPSVHGEGLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEE- 71
P PP L+ PS GE GEG G GG GG GG SG E
Sbjct: 142 PPEEPPRELESVPSKLGEP-PPLGEG---------------GGGGGEGGGAGGGSGEREG 185
Query: 72 ----------WR----RAKRKREIG--------RSDKKGEDFECNSRSFGLGVPGGGIG 108
WR RA+++ G S G+ SR+ G GV GGG G
Sbjct: 186 GAPQPPPPRGWRGKGVRAQQRGGSGGEGASPSPSSSSAGKTPGTGSRNSGSGVAGGGSG 244
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 28.9 bits (63), Expect = 1.5
Identities = 41/153 (26%), Positives = 52/153 (33%), Gaps = 28/153 (18%)
Query: 8 RLSSLPLRAPPYPLQESPSVHGE--------GLQRRGEGVLRVTLYARGKTGVEGLLGGT 59
RL + P A P+P++ + + G QR G RG G
Sbjct: 74 RLPAEPAHAVPHPVRPAARLRAPARDPVPLAGRQRAGAA-------PRGPGGPARTPAVR 126
Query: 60 VGGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLG--------VPGGGIGIAP 111
G R GEE R R G S +G R G VP G G P
Sbjct: 127 AGRRAADGPGEEAPAPGRARFSGLSQPRGPQPRAAVRPRRGGALPRGTGAVPERGPGTEP 186
Query: 112 LRGRRRVDWQEAAKRHQ-----PVSQKPHRRHT 139
RGRR D Q R + P ++ +RHT
Sbjct: 187 QRGRRCSDLQGLGGRLRGCPAGPSARGERQRHT 219
>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
sapiens]
Length = 756
Score = 28.5 bits (62), Expect = 1.9
Identities = 38/137 (27%), Positives = 49/137 (35%), Gaps = 28/137 (20%)
Query: 13 PLRAPPYPLQESPSVHGEGLQRRGEGVLRVTLYAR---------------GKTGVEGLLG 57
P + P L P+VHG GL G+ V + L R G+ G L
Sbjct: 540 PAQRQPPALPACPAVHG-GLV--GQAVAQHRLLQRLGWRLPGQAPGQELLGQARPGGGLS 596
Query: 58 GTVGGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNS----------RSFGLGVPGGGI 107
GG GG SG W+ R ++ + E R+ GLG GG
Sbjct: 597 SLSGGPGGGSGVGRWQLPGRAAAEDVAEAAAKVLEGAGPGRPRRGQLLRAAGLGQARGGG 656
Query: 108 GIAPLRGRRRVDWQEAA 124
A LRGR + W A
Sbjct: 657 AGAWLRGRLGLGWGPTA 673
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 28.5 bits (62), Expect = 1.9
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 6 PIRLSSLP-LRAPPYP--LQESPSVHGE-GLQ-------RRGEGVLRVTLYARGKTGVEG 54
P + S+P L PP P SP HG GL R+GE + T RGKTG G
Sbjct: 30 PRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 89
Query: 55 LLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGE 89
L G G G +G +K IG +KGE
Sbjct: 90 LAGEK--GDQGETG--------KKGPIGPEGEKGE 114
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 28.5 bits (62), Expect = 1.9
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 6 PIRLSSLP-LRAPPYP--LQESPSVHGE-GLQ-------RRGEGVLRVTLYARGKTGVEG 54
P + S+P L PP P SP HG GL R+GE + T RGKTG G
Sbjct: 30 PRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 89
Query: 55 LLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGE 89
L G G G +G +K IG +KGE
Sbjct: 90 LAGEK--GDQGETG--------KKGPIGPEGEKGE 114
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 28.5 bits (62), Expect = 1.9
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 6 PIRLSSLP-LRAPPYP--LQESPSVHGE-GLQ-------RRGEGVLRVTLYARGKTGVEG 54
P + S+P L PP P SP HG GL R+GE + T RGKTG G
Sbjct: 37 PRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLG 96
Query: 55 LLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGE 89
L G G G +G +K IG +KGE
Sbjct: 97 LAGEK--GDQGETG--------KKGPIGPEGEKGE 121
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 28.5 bits (62), Expect = 1.9
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 45 YARGKTGVEGLLGGTVGGRGGVS--GGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGV 102
++RG +G G GG+ GG GG+ GG +R + G S G F SFG G
Sbjct: 57 FSRGSSG-GGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGS--YGGSF--GGGSFGGGS 111
Query: 103 PGGG 106
GGG
Sbjct: 112 FGGG 115
>gi|163644316 hypothetical protein LOC23255 [Homo sapiens]
Length = 1586
Score = 28.5 bits (62), Expect = 1.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 70 EEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGG 105
+ WR+ K+ E G +GE E SR LGV GG
Sbjct: 730 KHWRQGKQMEEEGEEFTEGEHPETLSRLGELGVQGG 765
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 28.1 bits (61), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 52 VEGLLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAP 111
V +LGG +GGR G+ R +R G ++ R G G GGG G+
Sbjct: 576 VPTVLGGALGGRAGLVAAPARRECPARRRGGCWPRRPR------RRHGGGGGGGGPGLQD 629
Query: 112 LRG 114
L G
Sbjct: 630 LLG 632
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 28.1 bits (61), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 52 VEGLLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAP 111
V +LGG +GGR G+ R +R G ++ R G G GGG G+
Sbjct: 576 VPTVLGGALGGRAGLVAAPARRECPARRRGGCWPRRPR------RRHGGGGGGGGPGLQD 629
Query: 112 LRG 114
L G
Sbjct: 630 LLG 632
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 28.1 bits (61), Expect = 2.5
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 48 GKTGVEGLLGGTVGGRGGVSGGEEWRR-AKRKREIGRSDKKGEDFECNSRS-FGLGVPGG 105
G G GL+G T G G+ G + R A +G + GED E + GLG P G
Sbjct: 302 GTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPG 361
Query: 106 GIGIAPLRGRR 116
G A L GRR
Sbjct: 362 LPGSAGLPGRR 372
>gi|222136585 timeless homolog [Homo sapiens]
Length = 1208
Score = 27.7 bits (60), Expect = 3.3
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 68 GGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPG 104
G E + A +KR++ SD++ E+ E +R+ LG PG
Sbjct: 1157 GKEPLKAAPKKRQLLDSDEEQEEDEGRNRAPELGAPG 1193
>gi|156766050 AHNAK nucleoprotein 2 [Homo sapiens]
Length = 5795
Score = 27.7 bits (60), Expect = 3.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 49 KTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGL 100
KTG E T GR G + RR +R+ E G DK+ D N+ L
Sbjct: 599 KTGREKATEDTEQGREGEATATADRREQRRTEEGLKDKEDSDSMTNTTKIQL 650
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 27.7 bits (60), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 48 GKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKR 79
G G G GG GG GG GG A+R R
Sbjct: 328 GGGGAVGAFGGAAGGAGGGGGGGGGAGAERDR 359
>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 27.3 bits (59), Expect = 4.3
Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 19/116 (16%)
Query: 7 IRLSSLPLRAPPYPLQESPSVHGEG------LQRRGEGV-LRVTLYARGKTGVEGLLGGT 59
I S++ R P P Q P EG L RG GV +G G G
Sbjct: 55 IAASAVGARGGPGPAQ-GPQREEEGAPGCRSLVGRGWGVGWAAVAEVQGTVGERGACAFG 113
Query: 60 VGGRG----GVSGGEEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAP 111
GGRG GV G E + RK + GRS + G + FG G G + + P
Sbjct: 114 -GGRGLLAAGVGGAEGGCQVTRKIKRGRSKEGGGSW------FGAGKETGEVSLLP 162
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 27.3 bits (59), Expect = 4.3
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 31 GLQRRGEGVLRVTLYARGKTGVEGLLGGTVGGRGGVSGGEEWRRAKRKREIGRSDKKGED 90
G RRG G R + + G++G G GRG G R R R G S ++G
Sbjct: 136 GPPRRGRGASRGREFRGQENGLDGTKSGGPSGRGTERG-----RRGRGRGRGGSGRRGGR 190
Query: 91 F 91
F
Sbjct: 191 F 191
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.139 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,632,843
Number of Sequences: 37866
Number of extensions: 330632
Number of successful extensions: 1519
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1459
Number of HSP's gapped (non-prelim): 95
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.