Guide to the Human Genome
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Name: TIMELESS Sequence: fasta or formatted (1208aa) NCBI GI: 222136585
Description:

timeless homolog

Referenced in:

Circadian Rhythms

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4        101           3
 C cysteine            1.5         18           2
 D aspartate           5.4         65           3
 E glutamate          11.5        139          13
 F phenylalanine       3.9         47           2
 G glycine             4.3         52           2
 H histidine           2.7         33           2
 I isoleucine          3.2         39           2
 K lysine              5.6         68           5
 L leucine            13.6        164           3
 M methionine          1.9         23           2
 N asparagine          3.2         39           2
 P proline             3.8         46           2
 Q glutamine           6.5         79           2
 R arginine            7.2         87           2
 S serine              6.1         74           3
 T threonine           2.6         31           2
 V valine              5.5         66           2
 W tryptophan          1.0         12           1
 Y tyrosine            2.1         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   timeless homolog 
TNRC18                0.008   trinucleotide repeat containing 18 
PELP1                 0.008   proline, glutamic acid and leucine rich protein 1 [...
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 2 ...
WDR87                 0.007   NYD-SP11 protein 
LOC100133758          0.007   PREDICTED: hypothetical protein, partial 
LOC440243             0.007   PREDICTED: Putative golgin subfamily A member 6-lik...
CHD2                  0.007   chromodomain helicase DNA binding protein 2 isoform...
CHD2                  0.007   chromodomain helicase DNA binding protein 2 isoform...
MYT1                  0.006   myelin transcription factor 1 
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
KIAA1529              0.006   hypothetical protein LOC57653 
MYST4                 0.006   MYST histone acetyltransferase (monocytic leukemia)...
C14orf43              0.006   hypothetical protein LOC91748 
C14orf43              0.006   hypothetical protein LOC91748 
ATRX                  0.006   transcriptional regulator ATRX isoform 2 
ATRX                  0.006   transcriptional regulator ATRX isoform 1 
GOLGA1                0.006   golgin 97 
FAM9A                 0.006   family with sequence similarity 9, member A 
TOP2A                 0.006   DNA topoisomerase II, alpha isozyme 
CGN                   0.006   cingulin 
EHMT2                 0.006   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.006   euchromatic histone-lysine N-methyltransferase 2 is...
BCL11A                0.006   B-cell CLL/lymphoma 11A isoform 1 
BCL11A                0.006   B-cell CLL/lymphoma 11A isoform 2 
PRKCSH                0.006   protein kinase C substrate 80K-H isoform 2 
TTBK1                 0.006   tau tubulin kinase 1 
CCDC108               0.006   coiled-coil domain containing 108 isoform 1 
DCAF8L2               0.006   DDB1 and CUL4 associated factor 8-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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