LOC649201 19022

Name: LOC649201	Sequence: fasta or formatted (601aa)		NCBI GI: 239746976
Description: PREDICTED: similar to paraneoplastic antigen MA1		Referenced in: Additional Brain Proteins Testes and Sperm
Other entries for this name: alt prot [541aa] PREDICTED: similar to paraneoplastic antigen MA1 alt prot [601aa] PREDICTED: similar to paraneoplastic antigen MA1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.3 80 3 C cysteine 2.0 12 1 D aspartate 5.0 30 2 E glutamate 8.2 49 3 F phenylalanine 2.7 16 1 G glycine 11.1 67 3 H histidine 1.0 6 1 I isoleucine 1.8 11 1 K lysine 2.7 16 1 L leucine 10.1 61 2 M methionine 2.0 12 1 N asparagine 0.8 5 1 P proline 7.0 42 4 Q glutamine 5.0 30 2 R arginine 9.0 54 4 S serine 6.8 41 2 T threonine 2.7 16 2 V valine 6.3 38 2 W tryptophan 2.2 13 1 Y tyrosine 0.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.997 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.723 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649238 0.512 PREDICTED: similar to hCG1645335 LOC649238 0.509 PREDICTED: similar to hCG1645335 LOC100287500 0.220 PREDICTED: hypothetical protein XP_002343900 PNMA6A 0.220 paraneoplastic antigen like 6A LOC100287466 0.216 PREDICTED: hypothetical protein XP_002343899 LOC100287428 0.216 PREDICTED: hypothetical protein XP_002343898 PNMA3 0.168 paraneoplastic cancer-testis-brain antigen PNMA5 0.146 paraneoplastic antigen like 5 PNMA5 0.146 paraneoplastic antigen like 5 PNMA5 0.146 paraneoplastic antigen like 5 PNMA1 0.143 paraneoplastic antigen MA1 LOC100128960 0.141 PREDICTED: similar to paraneoplastic antigen MA2 [H... LOC100128960 0.141 PREDICTED: similar to Putative paraneoplastic antig... MOAP1 0.112 modulator of apoptosis 1 PNMA2 0.099 paraneoplastic antigen MA2 ZCCHC12 0.077 zinc finger, CCHC domain containing 12 ZCCHC18 0.076 zinc finger, CCHC domain containing 18 PNMAL1 0.067 PNMA-like 1 isoform b PNMAL1 0.067 PNMA-like 1 isoform a PNMAL2 0.047 PNMA-like 2 NKX1-2 0.016 PREDICTED: NK1 homeobox 2 NKX1-2 0.016 PREDICTED: NK1 homeobox 2 NKX1-2 0.016 PREDICTED: NK1 homeobox 2 ENAH 0.015 enabled homolog isoform a ENAH 0.015 enabled homolog isoform b NKX1-2 0.014 NK1 homeobox 2 SLC24A1 0.014 solute carrier family 24 (sodium/potassium/calcium ex... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.