BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239752777 PREDICTED: hypothetical protein [Homo sapiens] (108 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239752777 PREDICTED: hypothetical protein [Homo sapiens] 229 4e-61 gi|239747289 PREDICTED: hypothetical protein XP_002346412 [Homo ... 229 4e-61 gi|239741113 PREDICTED: hypothetical protein XP_002342112 [Homo ... 229 4e-61 gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapi... 40 5e-04 gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens] 40 5e-04 gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.013 gi|210031154 zinc finger protein 541 [Homo sapiens] 35 0.013 gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 35 0.017 gi|38787970 tensin like C1 domain containing phosphatase isoform... 34 0.029 gi|38787957 tensin like C1 domain containing phosphatase isoform... 34 0.029 gi|38787941 tensin like C1 domain containing phosphatase isoform... 34 0.029 gi|26051273 voltage-gated potassium channel, subfamily H, member... 33 0.038 gi|4557729 voltage-gated potassium channel, subfamily H, member ... 33 0.038 gi|91208420 bassoon protein [Homo sapiens] 33 0.038 gi|66773040 phosphatidic acid phosphatase type 2 domain containi... 33 0.049 gi|239756768 PREDICTED: similar to hCG1774990 [Homo sapiens] 33 0.065 gi|239751271 PREDICTED: similar to hCG1774990 [Homo sapiens] 33 0.065 gi|239745760 PREDICTED: similar to hCG1774990 [Homo sapiens] 33 0.065 gi|21704287 sialidase 4 [Homo sapiens] 33 0.065 gi|115511036 alpha-kinase 3 [Homo sapiens] 32 0.084 gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 32 0.084 gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 32 0.084 gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 32 0.084 gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens] 32 0.14 gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens] 32 0.14 gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] 32 0.14 gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] 32 0.14 gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 32 0.14 gi|156071474 solute carrier family 4, anion exchanger, member 2 ... 30 0.32 gi|83716021 GRB2-associated binding protein family, member 4 [Ho... 30 0.32 >gi|239752777 PREDICTED: hypothetical protein [Homo sapiens] Length = 108 Score = 229 bits (584), Expect = 4e-61 Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA 60 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA Sbjct: 1 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA 60 Query: 61 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS 108 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS Sbjct: 61 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS 108 >gi|239747289 PREDICTED: hypothetical protein XP_002346412 [Homo sapiens] Length = 108 Score = 229 bits (584), Expect = 4e-61 Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA 60 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA Sbjct: 1 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA 60 Query: 61 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS 108 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS Sbjct: 61 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS 108 >gi|239741113 PREDICTED: hypothetical protein XP_002342112 [Homo sapiens] Length = 108 Score = 229 bits (584), Expect = 4e-61 Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA 60 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA Sbjct: 1 MCIIVSCSAHATSAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQA 60 Query: 61 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS 108 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS Sbjct: 61 VASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS 108 >gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapiens] Length = 401 Score = 39.7 bits (91), Expect = 5e-04 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 42 GAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPG- 100 GAPA G + GH QQ+ ++AA I G G GAHPG PG G Sbjct: 303 GAPAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSG------GAGLGAHPGHQPGSAGQ 356 Query: 101 GPDV 104 PD+ Sbjct: 357 SPDL 360 >gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens] Length = 371 Score = 39.7 bits (91), Expect = 5e-04 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 42 GAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPG- 100 GAPA G + GH QQ+ ++AA I G G GAHPG PG G Sbjct: 273 GAPAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSG------GAGLGAHPGHQPGSAGQ 326 Query: 101 GPDV 104 PD+ Sbjct: 327 SPDL 330 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 35.0 bits (79), Expect = 0.013 Identities = 31/86 (36%), Positives = 34/86 (39%), Gaps = 9/86 (10%) Query: 17 PAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDAR 76 PAG PA R E + AG AP V + A A A P + AR Sbjct: 116 PAGPAPPAAKLRPPPEGS----AGSCAPVPAAAAVAAGPEP--APAGPAKPAGPAALAAR 169 Query: 77 QGPLRQGLGPSCGAHPGSAPGVPGGP 102 GP G GP G PG PG P GP Sbjct: 170 AGP---GPGPGPGPGPGPGPGKPAGP 192 Score = 32.7 bits (73), Expect = 0.065 Identities = 32/93 (34%), Positives = 35/93 (37%), Gaps = 10/93 (10%) Query: 18 AGGLVPAQLPRSRREQAHSRGAGPGA----PAHGEVDVDGH---VQQRQAVASRAATKRP 70 + G PA P + S GPGA PA G V + VQ A A P Sbjct: 308 SAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPG-VKAESPKRVVQAAPPAAQTLAASGP 366 Query: 71 GEIDARQ--GPLRQGLGPSCGAHPGSAPGVPGG 101 A GP QG PS A P APG P G Sbjct: 367 ASTAASMVIGPTMQGALPSPAAVPPPAPGTPTG 399 >gi|210031154 zinc finger protein 541 [Homo sapiens] Length = 1365 Score = 35.0 bits (79), Expect = 0.013 Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 25/109 (22%) Query: 9 AHATSAWWPAGGLVPAQLP--RSRREQAHSRGAG---------PGAPAHGEVDVDGHVQQ 57 A +T+ WP GG VPA LP R + A S+ + PG P +V Sbjct: 377 ARSTAECWPEGGSVPACLPLFRGQTVPASSQPSSHSFQWLRNLPGCPKSKGNNV------ 430 Query: 58 RQAVASRAATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDA 106 +P + +R+G G GPS G+ +P PGG DA Sbjct: 431 -------FVVHKPSAVPSREGS-ESGPGPSSGSPSEESPPGPGGGLEDA 471 >gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] Length = 271 Score = 34.7 bits (78), Expect = 0.017 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%) Query: 6 SCSAHATSAWWPAGGLVPAQLPRSRREQ----AHSRGAGPGAPAH--GEVDVDGHVQQRQ 59 S S +TS+ + P LP++ RE+ A G GPG+ AH G D +Q+Q Sbjct: 46 SSSTSSTSSTSSSSTTAPL-LPKAAREKPEAPAEPPGPGPGSGAHPGGSARPDAKEEQQQ 104 Query: 60 AVASRAAT---KRPGEIDARQGPLRQGLGPSCGAHPGSAPG 97 + + + KR +++ LR+ + P AH APG Sbjct: 105 QLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPG 145 >gi|38787970 tensin like C1 domain containing phosphatase isoform 3 [Homo sapiens] Length = 1285 Score = 33.9 bits (76), Expect = 0.029 Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 8/89 (8%) Query: 16 WPAGGLVPAQLPRSRRE---QAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGE 72 W G + LPRS R+ A S +GP P H V G R R T+ P Sbjct: 756 WREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTR-----RQDTRSPTS 810 Query: 73 IDARQGPLRQGLGPSCGAHPGSAPGVPGG 101 ++ + L P A G AP +P G Sbjct: 811 APTQRLSPGEALPPVSQAGTGKAPELPSG 839 >gi|38787957 tensin like C1 domain containing phosphatase isoform 2 [Homo sapiens] Length = 1409 Score = 33.9 bits (76), Expect = 0.029 Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 8/89 (8%) Query: 16 WPAGGLVPAQLPRSRRE---QAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGE 72 W G + LPRS R+ A S +GP P H V G R R T+ P Sbjct: 880 WREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTR-----RQDTRSPTS 934 Query: 73 IDARQGPLRQGLGPSCGAHPGSAPGVPGG 101 ++ + L P A G AP +P G Sbjct: 935 APTQRLSPGEALPPVSQAGTGKAPELPSG 963 >gi|38787941 tensin like C1 domain containing phosphatase isoform 1 [Homo sapiens] Length = 1419 Score = 33.9 bits (76), Expect = 0.029 Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 8/89 (8%) Query: 16 WPAGGLVPAQLPRSRRE---QAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGE 72 W G + LPRS R+ A S +GP P H V G R R T+ P Sbjct: 890 WREGPSGHSTLPRSPRDAPCSASSELSGPSTPLHTSSPVQGKESTR-----RQDTRSPTS 944 Query: 73 IDARQGPLRQGLGPSCGAHPGSAPGVPGG 101 ++ + L P A G AP +P G Sbjct: 945 APTQRLSPGEALPPVSQAGTGKAPELPSG 973 >gi|26051273 voltage-gated potassium channel, subfamily H, member 2 isoform c [Homo sapiens] Length = 819 Score = 33.5 bits (75), Expect = 0.038 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%) Query: 41 PGAPAHGEVDVDGHVQQRQAVASRAAT----KRPGEIDARQGPLRQGLGPSCGAHPGSAP 96 PG+P E++ Q+++ ++ R T ++PGE+ A GP R G GPS PG Sbjct: 529 PGSPGSTELEGGFSRQRKRKLSFRRRTDKDTEQPGEVSAL-GPGRAGAGPSSRGRPGGPW 587 Query: 97 G 97 G Sbjct: 588 G 588 >gi|4557729 voltage-gated potassium channel, subfamily H, member 2 isoform a [Homo sapiens] Length = 1159 Score = 33.5 bits (75), Expect = 0.038 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%) Query: 41 PGAPAHGEVDVDGHVQQRQAVASRAAT----KRPGEIDARQGPLRQGLGPSCGAHPGSAP 96 PG+P E++ Q+++ ++ R T ++PGE+ A GP R G GPS PG Sbjct: 869 PGSPGSTELEGGFSRQRKRKLSFRRRTDKDTEQPGEVSAL-GPGRAGAGPSSRGRPGGPW 927 Query: 97 G 97 G Sbjct: 928 G 928 >gi|91208420 bassoon protein [Homo sapiens] Length = 3926 Score = 33.5 bits (75), Expect = 0.038 Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 12/94 (12%) Query: 19 GGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQG 78 G A P + + S GP PA G + Q S+ K P + A Q Sbjct: 3809 GSAPAASQPAGKPQPGPSTATGP-QPA-------GPPRAEQTNGSKGTAKAPQQGRAPQA 3860 Query: 79 PLRQGLGPS---CGAHPGSAPGVPGG-PDVDAGS 108 G GP+ GA PG PG P G P D S Sbjct: 3861 QPAPGPGPAGVKAGARPGGTPGAPAGQPGADGES 3894 Score = 26.6 bits (57), Expect = 4.6 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Query: 18 AGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQ 77 A + PA+ P + A ++ G G P+ E+ V ++ + AA K A Sbjct: 2270 ASSVPPAEGPVYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKEAAGAPA-P 2328 Query: 78 GPLRQGLGPSCGAHPGSAPGVPGGP 102 PL G P A PG G P Sbjct: 2329 APL-AGQKPPADAAPGGGSGALSRP 2352 Score = 26.2 bits (56), Expect = 6.0 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 12/57 (21%) Query: 23 PAQLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQGP 79 PA+ P + +Q SR GPG P G RQA +R AT PG A P Sbjct: 253 PAKQPLGKPDQERSR--GPGGPQPG---------SRQAETAR-ATSVPGPAQAAAPP 297 >gi|66773040 phosphatidic acid phosphatase type 2 domain containing 2 [Homo sapiens] Length = 295 Score = 33.1 bits (74), Expect = 0.049 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 34 AHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRP--GEIDARQGPL-RQGLGPSCGA 90 A S + PG+PAHG + + ++SRA P + A + P+ R+G P A Sbjct: 17 ASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAA 76 Query: 91 HPGSAPGVP 99 P +P P Sbjct: 77 GPSQSPAPP 85 >gi|239756768 PREDICTED: similar to hCG1774990 [Homo sapiens] Length = 280 Score = 32.7 bits (73), Expect = 0.065 Identities = 25/76 (32%), Positives = 31/76 (40%) Query: 27 PRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQGPLRQGLGP 86 PR R+E+ RGA A + + D HV+ AVA A R DA P R + P Sbjct: 147 PRPRKEKWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAP 206 Query: 87 SCGAHPGSAPGVPGGP 102 SA G P Sbjct: 207 VPVLPAASAAGDMSNP 222 >gi|239751271 PREDICTED: similar to hCG1774990 [Homo sapiens] Length = 246 Score = 32.7 bits (73), Expect = 0.065 Identities = 25/76 (32%), Positives = 31/76 (40%) Query: 27 PRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQGPLRQGLGP 86 PR R+E+ RGA A + + D HV+ AVA A R DA P R + P Sbjct: 113 PRPRKEKWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAP 172 Query: 87 SCGAHPGSAPGVPGGP 102 SA G P Sbjct: 173 VPVLPAASAAGDMSNP 188 >gi|239745760 PREDICTED: similar to hCG1774990 [Homo sapiens] Length = 280 Score = 32.7 bits (73), Expect = 0.065 Identities = 25/76 (32%), Positives = 31/76 (40%) Query: 27 PRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQGPLRQGLGP 86 PR R+E+ RGA A + + D HV+ AVA A R DA P R + P Sbjct: 147 PRPRKEKWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKARASAPDAVVTPPRLAVAP 206 Query: 87 SCGAHPGSAPGVPGGP 102 SA G P Sbjct: 207 VPVLPAASAAGDMSNP 222 >gi|21704287 sialidase 4 [Homo sapiens] Length = 496 Score = 32.7 bits (73), Expect = 0.065 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Query: 13 SAWWPAGGLVPAQLPRSRREQAHSRGAGPGAPAHGEVDVDG-HVQQRQAVASRAATKRPG 71 +AW G +V P R + S GPG+P + G H +A + PG Sbjct: 284 TAWGCQGSIVGFPAPAPNRPRDDSWSVGPGSPLQPPLLGPGVHEPPEEAAVDPRGGQVPG 343 Query: 72 EIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAGS 108 +R P +G GP PG PGV G D GS Sbjct: 344 GPFSRLQP--RGDGP---RQPGPRPGVSG----DVGS 371 >gi|115511036 alpha-kinase 3 [Homo sapiens] Length = 1907 Score = 32.3 bits (72), Expect = 0.084 Identities = 28/102 (27%), Positives = 34/102 (33%), Gaps = 11/102 (10%) Query: 17 PAGGLVPAQLPRSRREQAHSRGAGPGA-------PAHGEVDVDGHVQ----QRQAVASRA 65 P G L + R + Q GAGPGA P + G + Q+Q +R Sbjct: 99 PPGPLQTRRYCRHQGRQGSGLGAGPGAGTWAPAPPGVSKPRCPGRARPGEGQQQVTTARP 158 Query: 66 ATKRPGEIDARQGPLRQGLGPSCGAHPGSAPGVPGGPDVDAG 107 G R G G GP GA GP V G Sbjct: 159 PAINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEG 200 >gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo sapiens] Length = 2191 Score = 32.3 bits (72), Expect = 0.084 Identities = 30/92 (32%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 17 PAGGLVPAQLPRSRREQAHSRGA--GPGAPAHGEVDVDGHVQQ----RQAVASRAATKRP 70 P GG PA +P + A GPG A D G Q AS AA P Sbjct: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219 Query: 71 GEIDARQGPLRQGLGPSCGAHPG-SAPGVPGG 101 G +D Q C +PG S PG GG Sbjct: 220 GSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251 >gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo sapiens] Length = 2231 Score = 32.3 bits (72), Expect = 0.084 Identities = 30/92 (32%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 17 PAGGLVPAQLPRSRREQAHSRGA--GPGAPAHGEVDVDGHVQQ----RQAVASRAATKRP 70 P GG PA +P + A GPG A D G Q AS AA P Sbjct: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219 Query: 71 GEIDARQGPLRQGLGPSCGAHPG-SAPGVPGG 101 G +D Q C +PG S PG GG Sbjct: 220 GSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251 >gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo sapiens] Length = 2178 Score = 32.3 bits (72), Expect = 0.084 Identities = 30/92 (32%), Positives = 34/92 (36%), Gaps = 7/92 (7%) Query: 17 PAGGLVPAQLPRSRREQAHSRGA--GPGAPAHGEVDVDGHVQQ----RQAVASRAATKRP 70 P GG PA +P + A GPG A D G Q AS AA P Sbjct: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219 Query: 71 GEIDARQGPLRQGLGPSCGAHPG-SAPGVPGG 101 G +D Q C +PG S PG GG Sbjct: 220 GSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251 >gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens] Length = 1031 Score = 31.6 bits (70), Expect = 0.14 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query: 40 GPGAPAHGEVDVDGHVQQRQAVASRAATKR-----PGEIDARQGPLRQGLGPSCGA-HPG 93 GPG P++ +V V G ++ +A AS +A KR P D R+G R GL G HP Sbjct: 869 GPGEPSNSKVLVSGK-RKDKASASSSAKKREHPRKPKAGDHRRGTARLGLSTVTGKNHPA 927 Query: 94 SAPGVPGGP 102 A + P Sbjct: 928 QARSLVEAP 936 >gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens] Length = 1006 Score = 31.6 bits (70), Expect = 0.14 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query: 40 GPGAPAHGEVDVDGHVQQRQAVASRAATKR-----PGEIDARQGPLRQGLGPSCGA-HPG 93 GPG P++ +V V G ++ +A AS +A KR P D R+G R GL G HP Sbjct: 844 GPGEPSNSKVLVSGK-RKDKASASSSAKKREHPRKPKAGDHRRGTARLGLSTVTGKNHPA 902 Query: 94 SAPGVPGGP 102 A + P Sbjct: 903 QARSLVEAP 911 >gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] Length = 1044 Score = 31.6 bits (70), Expect = 0.14 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query: 40 GPGAPAHGEVDVDGHVQQRQAVASRAATKR-----PGEIDARQGPLRQGLGPSCGA-HPG 93 GPG P++ +V V G ++ +A AS +A KR P D R+G R GL G HP Sbjct: 882 GPGEPSNSKVLVSGK-RKDKASASSSAKKREHPRKPKAGDHRRGTARLGLSTVTGKNHPA 940 Query: 94 SAPGVPGGP 102 A + P Sbjct: 941 QARSLVEAP 949 >gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] Length = 1079 Score = 31.6 bits (70), Expect = 0.14 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query: 40 GPGAPAHGEVDVDGHVQQRQAVASRAATKR-----PGEIDARQGPLRQGLGPSCGA-HPG 93 GPG P++ +V V G ++ +A AS +A KR P D R+G R GL G HP Sbjct: 917 GPGEPSNSKVLVSGK-RKDKASASSSAKKREHPRKPKAGDHRRGTARLGLSTVTGKNHPA 975 Query: 94 SAPGVPGGP 102 A + P Sbjct: 976 QARSLVEAP 984 >gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] Length = 411 Score = 31.6 bits (70), Expect = 0.14 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Query: 17 PAGGLVPAQLPRSRREQAHSRGAGP---GAPAHGEVDVDGHVQQRQAVASRAATKRPGEI 73 P GL+P +P G GP P+ ++ G +Q + S + PG + Sbjct: 246 PNPGLIPGPIP------GPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSL 299 Query: 74 DARQGPLRQGLGPSCGAHPGSAPGVPG 100 L G GP G+ P PG PG Sbjct: 300 PGLAPILGPGSGPGSGSVPAPIPG-PG 325 >gi|156071474 solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1) [Homo sapiens] Length = 1241 Score = 30.4 bits (67), Expect = 0.32 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 32 EQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRPGEIDARQGPLRQGLGPSCGAH 91 ++A SRG ++GE D + H Q + +T P DAR+ QG G Sbjct: 52 QEAGSRGGEEPGRSYGEEDFEYHRQSSHHIHHPLSTHLPP--DARRRKTPQGPGRKPRRR 109 Query: 92 PGSAP 96 PG++P Sbjct: 110 PGASP 114 >gi|83716021 GRB2-associated binding protein family, member 4 [Homo sapiens] Length = 574 Score = 30.4 bits (67), Expect = 0.32 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Query: 25 QLPRSRREQAHSRGAGPGAPAHGEVDVDGHVQQRQAVASR-AATKRPGEIDARQGPLRQG 83 ++P S H+RG+ G+ A E + Q ASR A + G G G Sbjct: 289 RIPWSLASHGHTRGSLTGSEADNEASSGKYTQHGGGNASRPAESMHEGVCSFLPGRTLVG 348 Query: 84 LGPSCGAHPGSAPGVPGGPDVDA 106 L S + P PG P + A Sbjct: 349 LSDSIASEGSCVPMNPGSPTLPA 371 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.133 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,914,723 Number of Sequences: 37866 Number of extensions: 311252 Number of successful extensions: 1451 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 131 Number of HSP's that attempted gapping in prelim test: 1324 Number of HSP's gapped (non-prelim): 262 length of query: 108 length of database: 18,247,518 effective HSP length: 78 effective length of query: 30 effective length of database: 15,293,970 effective search space: 458819100 effective search space used: 458819100 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.