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Search of human proteins with 239752659
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752659 PREDICTED: hypothetical protein [Homo sapiens]
(186 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752659 PREDICTED: hypothetical protein [Homo sapiens] 399 e-111
gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo sap... 123 1e-28
gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo sap... 123 1e-28
gi|116235448 hypothetical protein LOC81610 [Homo sapiens] 35 0.037
gi|25092658 hypothetical protein LOC221927 [Homo sapiens] 34 0.083
gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens] 33 0.11
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 33 0.18
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 33 0.18
gi|55741571 leucine rich repeat and fibronectin type III domain ... 33 0.18
gi|22749289 hypothetical protein LOC170062 [Homo sapiens] 33 0.18
gi|58761492 Rho guanine nucleotide exchange factor (GEF) 10-like... 32 0.41
gi|74136547 Rho guanine nucleotide exchange factor (GEF) 10-like... 32 0.41
gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo ... 31 0.54
gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo ... 31 0.54
gi|38201677 teashirt family zinc finger 1 [Homo sapiens] 31 0.54
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 31 0.54
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 31 0.54
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 31 0.54
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 31 0.54
gi|134244285 Notch homolog 3 [Homo sapiens] 31 0.70
gi|148886668 zinc finger CCCH-type containing 12C [Homo sapiens] 31 0.70
gi|112421108 capicua homolog [Homo sapiens] 31 0.70
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 30 0.92
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 30 0.92
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 30 0.92
gi|4557595 forkhead box F2 [Homo sapiens] 30 0.92
gi|155723000 mixed lineage kinase 4 [Homo sapiens] 30 0.92
gi|50593110 5' nucleotidase, cytosolic IB isoform 1 [Homo sapiens] 30 0.92
gi|50593108 5' nucleotidase, cytosolic IB isoform 2 [Homo sapiens] 30 0.92
gi|55741677 SET domain containing 1A [Homo sapiens] 30 1.2
>gi|239752659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 399 bits (1024), Expect = e-111
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNVHLS 60
MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNVHLS
Sbjct: 1 MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNVHLS 60
Query: 61 STLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSSSL 120
STLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSSSL
Sbjct: 61 STLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSSSL 120
Query: 121 GSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAPHSSYHLAFRGAWLCYPRELAQELSA 180
GSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAPHSSYHLAFRGAWLCYPRELAQELSA
Sbjct: 121 GSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAPHSSYHLAFRGAWLCYPRELAQELSA 180
Query: 181 LAEGPL 186
LAEGPL
Sbjct: 181 LAEGPL 186
>gi|239747203 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 451
Score = 123 bits (308), Expect = 1e-28
Identities = 57/57 (100%), Positives = 57/57 (100%)
Query: 1 MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNV 57
MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNV
Sbjct: 38 MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNV 94
Score = 105 bits (261), Expect = 3e-23
Identities = 61/109 (55%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
Query: 15 GPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLN------------------ 56
GP QQL +VS G VQR A PV A P QQ +
Sbjct: 218 GPALQQQLGHPRVSVPGGLVQRGAPRPVHRAHRGPSLQQETHQGRVAPQHGQVERGPACV 277
Query: 57 VHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSES 105
VHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVL S S
Sbjct: 278 VHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLACSGRSMS 326
>gi|239741003 PREDICTED: hypothetical protein LOC643965 [Homo
sapiens]
Length = 487
Score = 123 bits (308), Expect = 1e-28
Identities = 57/57 (100%), Positives = 57/57 (100%)
Query: 1 MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNV 57
MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNV
Sbjct: 38 MQGCEAQGVPRIHLGPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLNV 94
Score = 105 bits (261), Expect = 3e-23
Identities = 61/109 (55%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
Query: 15 GPLGDQQLDGKQVSSGGSPVQRRAAMPVPDAWVCPVAQQHLN------------------ 56
GP QQL +VS G VQR A PV A P QQ +
Sbjct: 218 GPALQQQLGHPRVSVPGGLVQRGAPRPVHRAHRGPSLQQETHQGRVAPQHGQVERGPACV 277
Query: 57 VHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSES 105
VHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVL S S
Sbjct: 278 VHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLACSGRSMS 326
>gi|116235448 hypothetical protein LOC81610 [Homo sapiens]
Length = 615
Score = 35.0 bits (79), Expect = 0.037
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 50 VAQQHLNVHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRA--SSESS- 106
V++ +++ A +++ +TR A T WSR T + ++L PR S+E S
Sbjct: 434 VSEVGTQTSITTACAGTQTAVITRIASSQTTIWSRSTTTQTDMDENILFPRGTQSTEGSP 493
Query: 107 ----SIHRSSCSSSSSSLGS 122
S+ RSS SSSS+ S
Sbjct: 494 VSKMSVSRSSSLKSSSSVSS 513
>gi|25092658 hypothetical protein LOC221927 [Homo sapiens]
Length = 821
Score = 33.9 bits (76), Expect = 0.083
Identities = 33/119 (27%), Positives = 44/119 (36%), Gaps = 21/119 (17%)
Query: 49 PVAQQHLNVHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWT-----TLGPSVL------ 97
P Q + H+ +L + VT+ L T + RC PWT L P V
Sbjct: 192 PACAQKIMDHVEESLCSAATPKVTQALNVLTTTFGRCQSPWTEALWVRLSPRVACLLERD 251
Query: 98 -VPRASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPL-WRPLA--------CPQ 146
+P A S + + S SS LWE++ L P PLA CPQ
Sbjct: 252 PIPAAHSFVDLLLCVARSPVFSSSDGSLWETVARALSCLGPTHMGPLALGILKLEHCPQ 310
>gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]
Length = 506
Score = 33.5 bits (75), Expect = 0.11
Identities = 22/55 (40%), Positives = 27/55 (49%)
Query: 101 ASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAP 155
+SS S+S SS S+S SS GSG S G L+R P+P R AP
Sbjct: 37 SSSSSTSDSSSSSSTSGSSSGSGSSSSSSGSTSSRSRLYRKKRVPEPSRRARRAP 91
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 32.7 bits (73), Expect = 0.18
Identities = 19/35 (54%), Positives = 21/35 (60%)
Query: 88 PWTTLGPSVLVPRASSESSSIHRSSCSSSSSSLGS 122
P +T P VP +SS SSS SS SSSSSS S
Sbjct: 81 PQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSS 115
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 32.7 bits (73), Expect = 0.18
Identities = 19/35 (54%), Positives = 21/35 (60%)
Query: 88 PWTTLGPSVLVPRASSESSSIHRSSCSSSSSSLGS 122
P +T P VP +SS SSS SS SSSSSS S
Sbjct: 81 PQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSS 115
>gi|55741571 leucine rich repeat and fibronectin type III domain
containing 2 [Homo sapiens]
Length = 789
Score = 32.7 bits (73), Expect = 0.18
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 56 NVHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRAS--SESSSIHRSSC 113
N S +A S+ ++ G S P GP +V R ++S+ R+S
Sbjct: 561 NHEAPSKMAAAVSNVYSQTNGAQPPPPSSAPAGAPPQGPPKVVVRNELLDFTASLARASD 620
Query: 114 SSSSSSLGSGLWESIWGGAGILHPLWR-PLACPQPCP 149
SSSSSSLGSG AG+ WR P + P+P P
Sbjct: 621 SSSSSSLGSG------EAAGLGRAPWRIPPSAPRPKP 651
>gi|22749289 hypothetical protein LOC170062 [Homo sapiens]
Length = 645
Score = 32.7 bits (73), Expect = 0.18
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 19/127 (14%)
Query: 44 DAWV-CPVAQQHLNVHLSSTLAPCRSSCVT---------RPAGPLHTAWSRCPQPWTTLG 93
DAW C ++ V S PC SC RP P SR P+P T
Sbjct: 161 DAWARCEAREKTTEVPTESGKYPCGESCPRPPETPVSRLRPQLPKTPVSSRRPEPPKTRA 220
Query: 94 PSVLVPRASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRP----LACPQPCP 149
PS+ + SS+H + +S L E+ G+ H P ++ P P
Sbjct: 221 PSLRPEPPKTRVSSLHPEPPETRASHLRVDPPET-----GVSHLCPEPPKTLVSSVHPEP 275
Query: 150 RPTGAPH 156
TGA H
Sbjct: 276 PDTGASH 282
>gi|58761492 Rho guanine nucleotide exchange factor (GEF) 10-like
isoform 1 [Homo sapiens]
Length = 1279
Score = 31.6 bits (70), Expect = 0.41
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 70 CVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASS----ESSSIHRSSCSSSSSSL--GSG 123
C+T GP+ T S W + GP V V A++ +S H+ S + + GSG
Sbjct: 966 CLTVGPGPVRTLLSLEDAVWASCGPRVTVLEATTLQPQQSFEAHQDEAVSVTHMVKAGSG 1025
Query: 124 LWESIWGGAGI 134
+W + G I
Sbjct: 1026 VWMAFSSGTSI 1036
>gi|74136547 Rho guanine nucleotide exchange factor (GEF) 10-like
isoform 2 [Homo sapiens]
Length = 1240
Score = 31.6 bits (70), Expect = 0.41
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 70 CVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASS----ESSSIHRSSCSSSSSSL--GSG 123
C+T GP+ T S W + GP V V A++ +S H+ S + + GSG
Sbjct: 927 CLTVGPGPVRTLLSLEDAVWASCGPRVTVLEATTLQPQQSFEAHQDEAVSVTHMVKAGSG 986
Query: 124 LWESIWGGAGI 134
+W + G I
Sbjct: 987 VWMAFSSGTSI 997
>gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo
sapiens]
Length = 671
Score = 31.2 bits (69), Expect = 0.54
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 54 HLNVHLSSTLAPCRSSCVTR----PAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIH 109
HL V+ + + P SS + P P + +P TT+ PS + S S
Sbjct: 476 HLTVYTGTCMPPSPSSPFSSSCRSPRKPFASPSRFIRRPSTTICPSPIRVALESSSGLEQ 535
Query: 110 RSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQ 146
+ CS S + G + ES P RP A P+
Sbjct: 536 KGECSGSMAPRGPSVTESSEASLDTSWPRSRPRAPPK 572
>gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo
sapiens]
Length = 674
Score = 31.2 bits (69), Expect = 0.54
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 54 HLNVHLSSTLAPCRSSCVTR----PAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIH 109
HL V+ + + P SS + P P + +P TT+ PS + S S
Sbjct: 479 HLTVYTGTCMPPSPSSPFSSSCRSPRKPFASPSRFIRRPSTTICPSPIRVALESSSGLEQ 538
Query: 110 RSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQ 146
+ CS S + G + ES P RP A P+
Sbjct: 539 KGECSGSMAPRGPSVTESSEASLDTSWPRSRPRAPPK 575
>gi|38201677 teashirt family zinc finger 1 [Homo sapiens]
Length = 1032
Score = 31.2 bits (69), Expect = 0.54
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 88 PWTTLGPSVLVPRASSESSSIHRSSCSSSSSS 119
P +T GP+ P S SS+ H S+ S+SSSS
Sbjct: 119 PVSTTGPTTSTPSTSCSSSTSHSSTTSTSSSS 150
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 31.2 bits (69), Expect = 0.54
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 101 ASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRP 151
+ S SSS RSS SSSSSS S + I P P PQ P+P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQPQP 73
Score = 27.3 bits (59), Expect = 7.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 100 RASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAPHS 157
R+SS SSS S SS SSS S + RP A P+P P+ P S
Sbjct: 32 RSSSSSSSSSESGSSSRSSSNNSS--------------ISRPAAPPEPRPQQQPQPRS 75
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 31.2 bits (69), Expect = 0.54
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 101 ASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRP 151
+ S SSS RSS SSSSSS S + I P P PQ P+P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQPQP 73
Score = 27.3 bits (59), Expect = 7.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 100 RASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAPHS 157
R+SS SSS S SS SSS S + RP A P+P P+ P S
Sbjct: 32 RSSSSSSSSSESGSSSRSSSNNSS--------------ISRPAAPPEPRPQQQPQPRS 75
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 31.2 bits (69), Expect = 0.54
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 101 ASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRP 151
+ S SSS RSS SSSSSS S + I P P PQ P+P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQPQP 73
Score = 27.3 bits (59), Expect = 7.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 100 RASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAPHS 157
R+SS SSS S SS SSS S + RP A P+P P+ P S
Sbjct: 32 RSSSSSSSSSESGSSSRSSSNNSS--------------ISRPAAPPEPRPQQQPQPRS 75
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 31.2 bits (69), Expect = 0.54
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 101 ASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRP 151
+ S SSS RSS SSSSSS S + I P P PQ P+P
Sbjct: 23 SDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPAAPPEPRPQQQPQP 73
Score = 27.3 bits (59), Expect = 7.8
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 100 RASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAPHS 157
R+SS SSS S SS SSS S + RP A P+P P+ P S
Sbjct: 32 RSSSSSSSSSESGSSSRSSSNNSS--------------ISRPAAPPEPRPQQQPQPRS 75
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 30.8 bits (68), Expect = 0.70
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 7/96 (7%)
Query: 22 LDGKQVSSGGSPVQ---RRAAMPVPDAWVCPVAQQHLNVHLSSTLAPCRSSCVTRPAGPL 78
LDG ++GG Q R AA P WV Q H PC V + +
Sbjct: 44 LDGSPCANGGRCTQLPSREAACLCPPGWVGERCQLEDPCHSG----PCAGRGVCQSSVVA 99
Query: 79 HTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCS 114
TA C P GP +P S H + CS
Sbjct: 100 GTARFSCRCPRGFRGPDCSLPDPCLSSPCAHGARCS 135
>gi|148886668 zinc finger CCCH-type containing 12C [Homo sapiens]
Length = 883
Score = 30.8 bits (68), Expect = 0.70
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 54 HLNVHLSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSS-IHRSS 112
HL +HL + RSSC P +A S+ P LG S++ R S S S ++ SS
Sbjct: 705 HLALHLPHSAVGARSSCPGDYPSPPSSAHSKAPH----LGRSLVATRIDSISDSRLYDSS 760
Query: 113 CSSS----SSSLGSGLWE 126
S S G G WE
Sbjct: 761 PSRQRKPYSRQEGLGSWE 778
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 30.8 bits (68), Expect = 0.70
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 59 LSSTLAPCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSS 118
+ S+ CR P GP P P G +SS SS S+ +++S
Sbjct: 499 IRSSFTHCRPPLDPEPPGP--------PDPPVAFGKGYGSAPSSSASSPASSSASAATSF 550
Query: 119 SLGSGLWESIWGGAG 133
SLGSG +++ G G
Sbjct: 551 SLGSGTFKAQESGQG 565
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 30.4 bits (67), Expect = 0.92
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 94 PSVLVPRASSESSSIHRSSC--SSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPR 150
P LVPR + S+ R C + S +G+ L E G LWR P PCPR
Sbjct: 226 PLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGLWRRK--PAPCPR 282
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 30.4 bits (67), Expect = 0.92
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 94 PSVLVPRASSESSSIHRSSC--SSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPR 150
P LVPR + S+ R C + S +G+ L E G LWR P PCPR
Sbjct: 226 PLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEEQAAGEAAARGLWRRK--PAPCPR 282
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 30.4 bits (67), Expect = 0.92
Identities = 28/103 (27%), Positives = 35/103 (33%), Gaps = 8/103 (7%)
Query: 67 RSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSSSLGSGLWE 126
R C P P T CP T GPS V + S C S+ S G+++
Sbjct: 190 RCQCHGAPCDP-QTGACFCPAERT--GPSCDVSCSQGTSGFF----CPSTHSCQNGGVFQ 242
Query: 127 SIWGGAGILHPLWRPLACPQPCPRPTGAPHSSYHLAFRGAWLC 169
+ G P W C PCP P+ S LC
Sbjct: 243 TPQGSCSC-PPGWMGTICSLPCPEGFHGPNCSQECRCHNGGLC 284
>gi|4557595 forkhead box F2 [Homo sapiens]
Length = 444
Score = 30.4 bits (67), Expect = 0.92
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 64 APCRSSCVTRPAGPLHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSSSLGS 122
AP R +C P G L A P + P +S SSS +SC+SSSSS S
Sbjct: 10 APLRRACSPVP-GALQAALMSPPP--AAAAAAAAAPETTSSSSSSSSASCASSSSSSNS 65
>gi|155723000 mixed lineage kinase 4 [Homo sapiens]
Length = 1036
Score = 30.4 bits (67), Expect = 0.92
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 38 AAMPVPDAWVCPVAQQHLNVHLSSTLAPCRSSC-----VTRPAGPLHTAWSR 84
AA+ + W Q+ L + ++ +APCR + +RP+ P+H A+ R
Sbjct: 72 AAVSGDEGWWAGQVQRRLGIFPANYVAPCRPAASPAPPPSRPSSPVHVAFER 123
>gi|50593110 5' nucleotidase, cytosolic IB isoform 1 [Homo sapiens]
Length = 610
Score = 30.4 bits (67), Expect = 0.92
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 78 LHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSSSLGSGLWES 127
+ + WSR + +T PS+ PR+ + S+ + SS SS + S L +S
Sbjct: 117 VRSQWSRISRSPSTKAPSIDEPRSRNTSAKLPSSSTSSRTPSTSPSLHDS 166
>gi|50593108 5' nucleotidase, cytosolic IB isoform 2 [Homo sapiens]
Length = 550
Score = 30.4 bits (67), Expect = 0.92
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 78 LHTAWSRCPQPWTTLGPSVLVPRASSESSSIHRSSCSSSSSSLGSGLWES 127
+ + WSR + +T PS+ PR+ + S+ + SS SS + S L +S
Sbjct: 57 VRSQWSRISRSPSTKAPSIDEPRSRNTSAKLPSSSTSSRTPSTSPSLHDS 106
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 30.0 bits (66), Expect = 1.2
Identities = 22/55 (40%), Positives = 24/55 (43%)
Query: 101 ASSESSSIHRSSCSSSSSSLGSGLWESIWGGAGILHPLWRPLACPQPCPRPTGAP 155
+ SESSS SS SSSSSS S S + RP A P P P P
Sbjct: 1031 SDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPREVP 1085
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,625,700
Number of Sequences: 37866
Number of extensions: 541646
Number of successful extensions: 2869
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 2524
Number of HSP's gapped (non-prelim): 294
length of query: 186
length of database: 18,247,518
effective HSP length: 96
effective length of query: 90
effective length of database: 14,612,382
effective search space: 1315114380
effective search space used: 1315114380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.