Guide to the Human Genome
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Name: NT5C1B Sequence: fasta or formatted (610aa) NCBI GI: 50593110
Description:

5' nucleotidase, cytosolic IB isoform 1

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [550aa] 5' nucleotidase, cytosolic IB isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         43           2
 C cysteine            2.1         13           2
 D aspartate           5.1         31           2
 E glutamate           6.2         38           1
 F phenylalanine       3.4         21           2
 G glycine             5.4         33           2
 H histidine           2.0         12           1
 I isoleucine          4.4         27           1
 K lysine              5.6         34           2
 L leucine             9.0         55           2
 M methionine          2.3         14           2
 N asparagine          3.3         20           2
 P proline             7.0         43           3
 Q glutamine           5.7         35           5
 R arginine            7.9         48           2
 S serine             11.0         67           3
 T threonine           4.9         30           1
 V valine              3.0         18           1
 W tryptophan          1.1          7           1
 Y tyrosine            3.4         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5' nucleotidase, cytosolic IB isoform 1 
NT5C1B                0.829   5' nucleotidase, cytosolic IB isoform 2 
NT5C1A                0.350   5'-nucleotidase, cytosolic IA 
SRRM2                 0.020   splicing coactivator subunit SRm300 
ZC3H18                0.019   zinc finger CCCH-type containing 18 
MUC7                  0.018   mucin 7, secreted precursor 
MUC7                  0.018   mucin 7, secreted precursor 
MUC7                  0.018   mucin 7, secreted precursor 
FAM160A2              0.018   hypothetical protein LOC84067 isoform 1 
MRVI1                 0.016   JAW1-related protein isoform a 
MRVI1                 0.016   JAW1-related protein isoform b 
MRVI1                 0.016   JAW1-related protein isoform b 
FNBP4                 0.016   formin binding protein 4 
KIAA1522              0.016   hypothetical protein LOC57648 
LOC100134147          0.016   PREDICTED: hypothetical protein 
PCLO                  0.016   piccolo isoform 2 
PCLO                  0.016   piccolo isoform 1 
NHSL2                 0.016   NHS-like 2 
MLLT1                 0.015   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PLEKHA4               0.015   pleckstrin homology domain containing family A memb...
MYST3                 0.014   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.014   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.014   MYST histone acetyltransferase (monocytic leukemia)...
EVL                   0.014   Enah/Vasp-like 
PPP1R12C              0.014   protein phosphatase 1, regulatory subunit 12C 
LOC100128719          0.014   PREDICTED: hypothetical protein, partial 
LOC100128719          0.014   PREDICTED: hypothetical protein, partial 
RGL3                  0.014   ral guanine nucleotide dissociation stimulator-like...
ATN1                  0.014   atrophin-1 
ATN1                  0.014   atrophin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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