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Search of human proteins with 239752581
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens]
(333 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens] 691 0.0
gi|239747014 PREDICTED: similar to tektin 4 [Homo sapiens] 417 e-117
gi|239747088 PREDICTED: MAFF interacting protein [Homo sapiens] 357 1e-98
gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens] 345 2e-95
gi|21389613 tektin 4 [Homo sapiens] 288 5e-78
gi|13994250 tektin 3 [Homo sapiens] 74 1e-13
gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo ... 65 8e-11
gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo ... 65 8e-11
gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo ... 65 8e-11
gi|16753231 tektin 1 [Homo sapiens] 64 1e-10
gi|21389569 tektin 5 [Homo sapiens] 54 2e-07
gi|27894337 keratin 20 [Homo sapiens] 40 0.003
gi|40538794 coiled-coil domain containing 21 [Homo sapiens] 39 0.008
gi|115527097 CDC42-binding protein kinase beta [Homo sapiens] 38 0.011
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 38 0.014
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 37 0.019
gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo s... 37 0.032
gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo s... 37 0.032
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 37 0.032
gi|67782365 keratin 7 [Homo sapiens] 36 0.042
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 36 0.055
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 36 0.055
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 35 0.072
gi|34303932 transmembrane and coiled-coil domains 5A [Homo sapiens] 35 0.072
gi|31559829 keratin 25 [Homo sapiens] 35 0.093
gi|94538345 keratin 35 [Homo sapiens] 35 0.093
gi|157042792 coiled-coil domain containing 64B [Homo sapiens] 34 0.21
gi|153945736 keratin 27 [Homo sapiens] 33 0.27
gi|21264602 laminin alpha 5 [Homo sapiens] 33 0.27
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 33 0.27
>gi|239752581 PREDICTED: MAFF interacting protein [Homo sapiens]
Length = 333
Score = 691 bits (1782), Expect = 0.0
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MPPCELPCKEYDVARNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHES 60
MPPCELPCKEYDVARNTGTYMSSGLATA LEVWFQNCYARYHQAFANCNQSEQELQGHES
Sbjct: 1 MPPCELPCKEYDVARNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHES 60
Query: 61 QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA 120
QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA
Sbjct: 61 QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA 120
Query: 121 LDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARN 180
LDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARN
Sbjct: 121 LDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARN 180
Query: 181 KGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQIRLNRE 240
KGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQIRLNRE
Sbjct: 181 KGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQIRLNRE 240
Query: 241 HTEICEMDWSDKVEAYNLDETCGRHHSQSTEVQAHPALHHLPREGGPSSAPTLALAVVSP 300
HTEICEMDWSDKVEAYNLDETCGRHHSQSTEVQAHPALHHLPREGGPSSAPTLALAVVSP
Sbjct: 241 HTEICEMDWSDKVEAYNLDETCGRHHSQSTEVQAHPALHHLPREGGPSSAPTLALAVVSP 300
Query: 301 PSAWGPQRRCFPQPDPEALAPEDTWATVCPWHE 333
PSAWGPQRRCFPQPDPEALAPEDTWATVCPWHE
Sbjct: 301 PSAWGPQRRCFPQPDPEALAPEDTWATVCPWHE 333
>gi|239747014 PREDICTED: similar to tektin 4 [Homo sapiens]
Length = 507
Score = 417 bits (1072), Expect = e-117
Identities = 213/271 (78%), Positives = 224/271 (82%), Gaps = 30/271 (11%)
Query: 1 MPPCELPCKEYDVARNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHES 60
+PPCELPCKEYDV AFA+CNQSE+ELQGH+S
Sbjct: 16 VPPCELPCKEYDV------------------------------AFADCNQSERELQGHKS 45
Query: 61 QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA 120
QQLAAE QALAQ TQQDS RVGE+LQD HSW SELQ EVEALAAETDLLLAQKQRLEHA
Sbjct: 46 QQLAAEIQALAQPTQQDSKCRVGERLQDMHSWNSELQGEVEALAAETDLLLAQKQRLEHA 105
Query: 121 LDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARN 180
LDA E PFSIATDN+QC+Q HQHANL+RDHVETELLKA+PPAPSQCL NC SSRKPSA N
Sbjct: 106 LDAMEVPFSIATDNMQCNQRHQHANLVRDHVETELLKAYPPAPSQCLKNCCSSRKPSASN 165
Query: 181 KGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQIRLNRE 240
KG C+VMETLTVQEEANPGTEGCRTRALAHK+EAELIRNIQELLKR IVQAVSQIRLNRE
Sbjct: 166 KGVCEVMETLTVQEEANPGTEGCRTRALAHKEEAELIRNIQELLKRVIVQAVSQIRLNRE 225
Query: 241 HTEICEMDWSDKVEAYNLDETCGRHHSQSTE 271
H EICEMDWSDKVEAYNLDETCGRH SQSTE
Sbjct: 226 HMEICEMDWSDKVEAYNLDETCGRHRSQSTE 256
>gi|239747088 PREDICTED: MAFF interacting protein [Homo sapiens]
Length = 445
Score = 357 bits (915), Expect = 1e-98
Identities = 199/292 (68%), Positives = 210/292 (71%), Gaps = 56/292 (19%)
Query: 1 MPPCELPCKEYDVARNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHES 60
+PP ELPCKEYDVARNTG Y SSGLATA LEVWFQNCYARY QAFANCNQSE+ELQGHES
Sbjct: 16 VPPYELPCKEYDVARNTGAYTSSGLATAXLEVWFQNCYARYRQAFANCNQSERELQGHES 75
Query: 61 QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA 120
QQLAAETQALAQ TQQDST RVGE+LQDT+SWKSELQREVEALAAETDLLLAQKQRLE A
Sbjct: 76 QQLAAETQALAQPTQQDSTCRVGERLQDTNSWKSELQREVEALAAETDLLLAQKQRLERA 135
Query: 121 LDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARN 180
LDA E PFSI TDN+QCSQ HQH N LL+ H
Sbjct: 136 LDAMEVPFSITTDNMQCSQRHQHTN---------LLRDH--------------------- 165
Query: 181 KGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQIRLNRE 240
+ET + KEAELIRNIQELLKRAI+QAVSQI LN E
Sbjct: 166 ------VETELL-------------------KEAELIRNIQELLKRAIMQAVSQIXLNXE 200
Query: 241 HTEICEMDWSDKVEAYNLDETCGRHHSQSTEVQAHPALHHLPREGGPSSAPT 292
H EICEMDWSDKVEAYNLD+TCGRHHSQSTEVQAHP +E GP SA T
Sbjct: 201 HMEICEMDWSDKVEAYNLDKTCGRHHSQSTEVQAHPHSTTF-QERGPRSAST 251
>gi|239758055 PREDICTED: similar to tektin 4 [Homo sapiens]
Length = 254
Score = 345 bits (886), Expect = 2e-95
Identities = 191/260 (73%), Positives = 196/260 (75%), Gaps = 55/260 (21%)
Query: 1 MPPCELPCKEYDVARNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHES 60
MPPCELPCKEYD AFANCNQSE+ELQGHES
Sbjct: 16 MPPCELPCKEYD-------------------------------AFANCNQSERELQGHES 44
Query: 61 QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA 120
QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA
Sbjct: 45 QQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHA 104
Query: 121 LDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCL---------NNC- 170
LDATEAPFSIATDNLQCSQGHQ+ANLMRDHVETELLK Q L ++C
Sbjct: 105 LDATEAPFSIATDNLQCSQGHQNANLMRDHVETELLKVPAAVGGQDLWVQRGGAPGSSCG 164
Query: 171 --------------FSSRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAEL 216
+SRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAEL
Sbjct: 165 QATWLLQAHRRPALCASRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAEL 224
Query: 217 IRNIQELLKRAIVQAVSQIR 236
IRNIQELLKRAIVQAVSQIR
Sbjct: 225 IRNIQELLKRAIVQAVSQIR 244
>gi|21389613 tektin 4 [Homo sapiens]
Length = 435
Score = 288 bits (737), Expect = 5e-78
Identities = 163/283 (57%), Positives = 184/283 (65%), Gaps = 64/283 (22%)
Query: 1 MPPCELPCKEYDVARNTGTYMSSGLATAX-------LEVWFQNCYARYHQAFANCNQSEQ 53
+PPCELPCKEYDVARNTG Y SSGLATA LE WFQNCYARYHQAFA+ +QSE+
Sbjct: 5 VPPCELPCKEYDVARNTGAYTSSGLATASFRTSKYLLEEWFQNCYARYHQAFADRDQSER 64
Query: 54 ELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQ 113
Q HESQQLA ETQALAQ TQQDSTR VGE+LQDTHSWKSELQRE+EALAAET+LLLAQ
Sbjct: 65 --QRHESQQLATETQALAQRTQQDSTRTVGERLQDTHSWKSELQREMEALAAETNLLLAQ 122
Query: 114 KQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSS 173
KQRLE ALDATE PFSI TDNLQC + +H NL+RDHVETELLK ++ + N
Sbjct: 123 KQRLERALDATEVPFSITTDNLQCRERREHPNLVRDHVETELLK-----EAELIRNIQEL 177
Query: 174 RKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVS 233
K + Q + + + E HK+ E+
Sbjct: 178 LKRTI-----MQAVSQIRLNRE--------------HKETCEM----------------- 201
Query: 234 QIRLNREHTEICEMDWSDKVEAYNLDETCGRHHSQSTEVQAHP 276
DWSDK+EAYN+DETCGRHHSQSTEVQAHP
Sbjct: 202 --------------DWSDKMEAYNIDETCGRHHSQSTEVQAHP 230
>gi|13994250 tektin 3 [Homo sapiens]
Length = 490
Score = 74.3 bits (181), Expect = 1e-13
Identities = 61/229 (26%), Positives = 93/229 (40%), Gaps = 64/229 (27%)
Query: 49 NQSEQELQGHESQQLAAETQALAQG-------TQQDSTRRVGEQLQDTHSWKSELQREVE 101
N E H S++L +T L Q TQ D+T+ +GE++ D WKSE+ E++
Sbjct: 106 NYQESNTSRHNSEKLRVDTSRLIQDKYQQTRKTQADTTQNLGERVNDIGFWKSEIIHELD 165
Query: 102 ALAAETDLLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPP 161
+ ET+ L K+RLE AL TEAP +A + L + +L+ D VE +LL
Sbjct: 166 EMIGETNALTDVKKRLERALMETEAPLQVARECLFHREKRMGIDLVHDEVEAQLLTE--- 222
Query: 162 APSQCLNNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQ 221
++T+ C+ R H +A
Sbjct: 223 -------------------------VDTILC----------CQERMKLHLDKA------- 240
Query: 222 ELLKRAIVQAVSQIRLNREHTEICEMDWSDKVEAYNLDETCGRHHSQST 270
++Q+ NR E D SDK AY +D+ C HH ++T
Sbjct: 241 ----------IAQLAANRASQHELEKDLSDKQTAYRIDDKC--HHLRNT 277
>gi|169209613 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 65.1 bits (157), Expect = 8e-11
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 116 RLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRK 175
+L HA D PFSIAT+NLQ + H L+ D+VETELLK P Q +C
Sbjct: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQ---DC----- 354
Query: 176 PSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQI 235
P R P ++ L+V++ G + R L +EAELI +I ELL+R VQA ++
Sbjct: 355 PLLRTLCPFRIQHDLSVKQPRRVPGSGAQGRLLI--QEAELIGSIPELLERPTVQAGNRS 412
Query: 236 R 236
R
Sbjct: 413 R 413
>gi|169210642 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 65.1 bits (157), Expect = 8e-11
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 116 RLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRK 175
+L HA D PFSIAT+NLQ + H L+ D+VETELLK P Q +C
Sbjct: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQ---DC----- 354
Query: 176 PSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQI 235
P R P ++ L+V++ G + R L +EAELI +I ELL+R VQA ++
Sbjct: 355 PLLRTLCPFRIQHDLSVKQPRRVPGSGAQGRLLI--QEAELIGSIPELLERPTVQAGNRS 412
Query: 236 R 236
R
Sbjct: 413 R 413
>gi|169210176 PREDICTED: hypothetical protein LOC100128785 [Homo
sapiens]
Length = 639
Score = 65.1 bits (157), Expect = 8e-11
Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 116 RLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRK 175
+L HA D PFSIAT+NLQ + H L+ D+VETELLK P Q +C
Sbjct: 303 QLCHASDTMTVPFSIATNNLQYHEQCWHPYLVGDYVETELLKVLRPRGGQ---DC----- 354
Query: 176 PSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLKRAIVQAVSQI 235
P R P ++ L+V++ G + R L +EAELI +I ELL+R VQA ++
Sbjct: 355 PLLRTLCPFRIQHDLSVKQPRRVPGSGAQGRLLI--QEAELIGSIPELLERPTVQAGNRS 412
Query: 236 R 236
R
Sbjct: 413 R 413
>gi|16753231 tektin 1 [Homo sapiens]
Length = 418
Score = 64.3 bits (155), Expect = 1e-10
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 40 RYHQAFANCNQSEQELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQRE 99
+YH+A A ++SE+ + ESQ+L E + + +Q D +++ ++L++ WK EL +
Sbjct: 23 QYHRADAQRSRSERLVA--ESQRLVDEIEKTTRKSQSDVNKKLEQRLEEVQFWKKELDDK 80
Query: 100 VEALAAETDLLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLK 157
+E L TD LL K RLE AL+ + P I L + +L+ D VE EL+K
Sbjct: 81 LEQLVNVTDDLLIYKIRLEKALETLKEPLHITETCLAYREKRIGIDLVHDTVEHELIK 138
Score = 45.4 bits (106), Expect = 7e-05
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 181 KGPCQVMETLTVQEEANPGTEGCRTRALAHK--KEAELIRNIQELLKRAIVQAVSQIRLN 238
K P + ET E G + + H+ KEAE+I+ I LL R + +A QIR+N
Sbjct: 106 KEPLHITETCLAYREKRIGIDLVHD-TVEHELIKEAEIIQGIMALLTRTLEEASEQIRMN 164
Query: 239 REHTEICEMDWSDKVEAYNLDETCGRHHSQSTEVQ 273
R E D DK A +D+ C ++ S ++
Sbjct: 165 RSAKYNLEKDLKDKFVALTIDDICFSLNNNSPNIR 199
>gi|21389569 tektin 5 [Homo sapiens]
Length = 485
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 59 ESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLE 118
+S +L + L Q+ + R +G++L D WKSEL E++ L E L K+RLE
Sbjct: 118 DSMRLLQDKDQLTHQMQEGTCRNLGQRLSDIGFWKSELSYELDRLLTENQNLETVKRRLE 177
Query: 119 HALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLK 157
A + P +A + L + +L+ D+VE L++
Sbjct: 178 CAANEVNCPLQVALECLYHREKRIGIDLVHDNVEKNLIR 216
Score = 30.0 bits (66), Expect = 3.0
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 17/124 (13%)
Query: 45 FANCNQSEQELQGHESQQLAAETQALAQGTQQDSTRRVGE-------QLQDTHSWKSELQ 97
F+N N + S QL E + L + R+ + ++ + K++LQ
Sbjct: 298 FSNDNIKHSQNMRANSIQLREEAEHLFETLSDQMWRQFTDTNLAFNARISEVTDVKNKLQ 357
Query: 98 REV-----EALAAETDLLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVE 152
++ E AE ++L LE ++ A E P +A L+C + L RD +
Sbjct: 358 TQLAKTLQEIFQAENTIML-----LERSIMAKEGPLKVAQTRLECRTRRPNMELCRDIPQ 412
Query: 153 TELL 156
+L+
Sbjct: 413 LKLV 416
>gi|27894337 keratin 20 [Homo sapiens]
Length = 424
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 50 QSEQELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDL 109
+ + E+ ++ Q A E Q E+L+ T +EL+R ++L E
Sbjct: 243 RQKYEVMAQKNLQEAKEQFERQTAVLQQQVTVNTEELKGTEVQLTELRRTSQSLEIELQS 302
Query: 110 LLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMR 148
L+ K+ LEH L+ T+A +S NLQ A LM+
Sbjct: 303 HLSMKESLEHTLEETKARYSSQLANLQSLLSSLEAQLMQ 341
>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
Length = 762
Score = 38.5 bits (88), Expect = 0.008
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 50 QSEQELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQR---EVEALAAE 106
Q E E + Q++ + LA + ++ +QL+D+ +ELQ E+E+L E
Sbjct: 463 QKESEQNREKQQRIETLERYLADLPTLEDHQKQSQQLKDSELKSTELQEKVTELESLLEE 522
Query: 107 TDLLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETE 154
T + +K+ +L EA FS A +LQ Q + + VE E
Sbjct: 523 TQAICREKEIQLESLRQREAEFSSAGHSLQDKQSVEETSGEGPEVEME 570
>gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]
Length = 1711
Score = 38.1 bits (87), Expect = 0.011
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 16/196 (8%)
Query: 51 SEQELQGHESQQ--LAAETQALAQGTQQDSTRRVGE--QLQDTHSWKSELQREVEALAAE 106
S Q L+G E Q + E + L + + S R + +L+D H + +E L
Sbjct: 524 STQRLRGLEKQHRVVRQEKEELHKQLVEASERLKSQAKELKDAHQQRKLALQEFSELNER 583
Query: 107 TDLLLAQKQRLEHALDATEAPFSIATDNLQC-SQGHQHANLMRDHVETELLKAHPPAPSQ 165
L AQKQ++ L E +AT + Q + A +R +E +L A A +
Sbjct: 584 MAELRAQKQKVSRQLRDKEEEMEVATQKVDAMRQEMRRAEKLRKELEAQLDDAVAEASKE 643
Query: 166 CLNNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQELLK 225
RK ++ C+ ME+ + G G L H++E I++ EL K
Sbjct: 644 --------RKLREHSENFCKQMESELEALKVKQGGRGAGA-TLEHQQEISKIKS--ELEK 692
Query: 226 RAIVQAVSQIRLNREH 241
+ + +R H
Sbjct: 693 KVLFYEEELVRREASH 708
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 37.7 bits (86), Expect = 0.014
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 52 EQELQGHESQQLAAETQALAQGTQQDST--RRVGEQLQDTHSWKSELQREVEALAAETD- 108
E++LQ + ++ AA + A+ Q S R E L + K EL E+ AL E D
Sbjct: 992 EEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDE 1051
Query: 109 -LLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHA------NLMRDHVETELLKAHPP 161
LLLA+ ++ + AL E+ + ++ L G +H+ + R + + +
Sbjct: 1052 GLLLAESEK-QQALSLKESEKTALSEKLM---GTRHSLATISLEMERQKRDAQSRQEQDR 1107
Query: 162 APSQCLNNCFSSRKPSARNKGPCQVMETLTVQEEANP---GTEGCRTRALAHKKEAELIR 218
+ L + + E +QE+A + C A + + L+
Sbjct: 1108 STVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLE 1167
Query: 219 NIQELLKRAIVQAVSQIRLNREHTEI 244
+ ++ L+R +++A ++R ++E E+
Sbjct: 1168 DARDGLRRELLEAQRKLRESQEGREV 1193
Score = 31.6 bits (70), Expect = 1.0
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 50 QSEQELQGHESQQLA---AETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAE 106
++ Q+L G +QL+ +E +AL ++ +R+ ++ + QREV+ L +
Sbjct: 543 EASQDLLGTLRKQLSDSESERRAL-----EEQLQRLRDKTDGAMQAHEDAQREVQRLRSA 597
Query: 107 TDLLLAQKQRLEHALD-ATEAPFSIATDNLQCSQGHQHANLMRDHVETE 154
+LL +K L H+L A + + + + + RD +E E
Sbjct: 598 NELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEE 646
Score = 28.9 bits (63), Expect = 6.7
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 9 KEYDVARNTGTYMSSGLATAXLEVWFQNCYARYHQ-AFANCNQSEQELQGHES---QQLA 64
+E D R + ++ LA E AR Q A A ++ + + G S +LA
Sbjct: 1523 RERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELA 1582
Query: 65 AETQALAQGTQQ-----DSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEH 119
+ +++ + ++ D + LQ T S Q ++ + A L K+RL+
Sbjct: 1583 LQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKE 1642
Query: 120 ALDATEA 126
LDA+E+
Sbjct: 1643 VLDASES 1649
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 37.4 bits (85), Expect = 0.019
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 21/151 (13%)
Query: 46 ANCNQSEQEL---QGHESQQLAAETQALA-QGTQQDSTRRVGEQLQDTHSWKSELQREVE 101
A EQEL QG + + L +A + TR + QL++ + + EL+ +V
Sbjct: 503 AGLQAQEQELCRAQGQQEELLQRLQEAQEREAATASQTRALSSQLEEARAAQRELEAQVS 562
Query: 102 ALAAETDLLLAQ-KQRLEHALDATEAPFSIATDNLQCSQ-GHQHANLMRD--HVETELLK 157
+L+ + L Q +QRLE + A + T+ + + G Q A L ++ + +L +
Sbjct: 563 SLSRQVTQLQGQWEQRLEESSQAKTIHTASETNGMGPPEGGPQEAQLRKEVAALREQLEQ 622
Query: 158 AHPPAPSQCLNNCFSSRKPSARNKGPCQVME 188
AH S +PS + + CQ+ E
Sbjct: 623 AH-------------SHRPSGKEEALCQLQE 640
Score = 30.4 bits (67), Expect = 2.3
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 17/195 (8%)
Query: 57 GHESQQLAAETQALAQGTQQDSTRRVG---EQLQDTHSWKSELQREVEALAAETDLLLAQ 113
G + QL E AL + +Q + R E L L RE E L AE
Sbjct: 603 GPQEAQLRKEVAALREQLEQAHSHRPSGKEEALCQLQEENRRLSREQERLEAELAQEQES 662
Query: 114 KQRLEHALDATEAPFSIATDNL-------QCSQGHQHANLMRDHVETELLK--AHPPAPS 164
KQRLE TE+ + ++ + S+G+ A + E E L+ P+
Sbjct: 663 KQRLEGERRETESNWEAQLADILSWVNDEKVSRGYLQALATKMAEELESLRNVGTQTLPA 722
Query: 165 QCLNNCFSSRK-PSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHKKEAELIRNIQEL 223
+ L++ + +R+ ++ L + A G + T+ + +AE R +QE
Sbjct: 723 RPLDHQWKARRLQKMEASARLELQSALEAEIRAKQGLQERLTQVQEAQLQAE--RRLQEA 780
Query: 224 LK--RAIVQAVSQIR 236
K +A+ Q ++ +R
Sbjct: 781 EKQSQALQQELAMLR 795
>gi|24430183 outer dense fiber of sperm tails 2 isoform 2 [Homo
sapiens]
Length = 638
Score = 36.6 bits (83), Expect = 0.032
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 15 RNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHESQQLAAETQALAQGT 74
R T Y + L L+ F + +QA Q + ++ +E ++Q +
Sbjct: 477 RQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRL 536
Query: 75 QQDSTRRVGEQL-QDTHSWKSELQREVEALAAETDLLLAQKQRLEHALDATEAPFSIATD 133
+ D E+ ++ K E+ +E+EA + LA Q+L L TEA + D
Sbjct: 537 EADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQD 596
Query: 134 NLQCSQGHQHANL 146
L QG++ N+
Sbjct: 597 QL---QGYERKNI 606
>gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo
sapiens]
Length = 805
Score = 36.6 bits (83), Expect = 0.032
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 15 RNTGTYMSSGLATAXLEVWFQNCYARYHQAFANCNQSEQELQGHESQQLAAETQALAQGT 74
R T Y + L L+ F + +QA Q + ++ +E ++Q +
Sbjct: 472 RQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRL 531
Query: 75 QQDSTRRVGEQL-QDTHSWKSELQREVEALAAETDLLLAQKQRLEHALDATEAPFSIATD 133
+ D E+ ++ K E+ +E+EA + LA Q+L L TEA + D
Sbjct: 532 EADEVAAQLERCDKENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQD 591
Query: 134 NLQCSQGHQHANL 146
L QG++ N+
Sbjct: 592 QL---QGYERKNI 601
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 36.6 bits (83), Expect = 0.032
Identities = 58/229 (25%), Positives = 91/229 (39%), Gaps = 24/229 (10%)
Query: 48 CNQSEQEL-----QGHESQQLAAETQALAQGTQQDSTRRVGEQL-------QDTHSWKSE 95
C + E EL + E+ T A + Q + +GEQ+ Q KSE
Sbjct: 1213 CRKREAELGRLRRELEEAALRHEATVAALRRKQAEGAAELGEQVDSLQRVRQKLEKEKSE 1272
Query: 96 LQREVEALAAETDLLLAQKQRLEHALDATEAPFSIATDNLQCSQGH-QHANLMRDHVETE 154
L+ EV+ LAA + L K E E S A ++ Q A+ R ++TE
Sbjct: 1273 LRMEVDDLAANVETLTRAKASAEKLCRTYEDQLSEAKIKVEELQRQLADASTQRGRLQTE 1332
Query: 155 LLK-AHPPAPSQCLNNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRAL-AHKK 212
+ + +CL + S K A Q +E L Q E + A+ A +
Sbjct: 1333 SGELSRLLEEKECLISQLSRGKALA-----AQSLEELRRQLEEESKAKSALAHAVQALRH 1387
Query: 213 EAELIRNIQELLKRAIVQAVSQIRLNREHTEICEMDWSDKVEAYNLDET 261
+ +L+R E + A QA Q L++ + E+ + W K EA + T
Sbjct: 1388 DCDLLREQHE--EEAEAQAELQRLLSKANAEVAQ--WRSKYEADAIQRT 1432
Score = 28.9 bits (63), Expect = 6.7
Identities = 59/245 (24%), Positives = 92/245 (37%), Gaps = 41/245 (16%)
Query: 57 GHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQR 116
GHE A ET Q+ + +Q+ + EL++ +AL E + A +
Sbjct: 1536 GHEEALEALETLKRENKNLQEEISDLTDQVSLSGKSIQELEKTKKALEGEKSEIQAALEE 1595
Query: 117 LEHALDATE----------APFSIATDNLQCSQGHQHANLMRDHVE-TELLKAHPPAPSQ 165
E AL+ E + D + + ANL R+H E L+A A ++
Sbjct: 1596 AEGALELEETKTLRIQLELSQVKAEVDRKLAEKDEECANLRRNHQRAVESLQASLDAETR 1655
Query: 166 CLNNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEG-CRTRAL-AHKKE---------- 213
N +K + +G +E L + TE TR + A KE
Sbjct: 1656 ARNEALRLKK---KMEGDLNDLE-LQLGHATRQATEAQAATRLMQAQLKEEQAGRDEEQR 1711
Query: 214 --AELIRNIQELLKRAIVQA--VSQIRLNREHTE----ICEMDWSDKVEAYNLDETCGRH 265
AEL Q L +RA + A + ++R E E + E + + E NL
Sbjct: 1712 LAAELHEQAQALERRASLLAAELEELRAALEQGERSRRLAEQELLEATERLNL------L 1765
Query: 266 HSQST 270
HSQ+T
Sbjct: 1766 HSQNT 1770
>gi|67782365 keratin 7 [Homo sapiens]
Length = 469
Score = 36.2 bits (82), Expect = 0.042
Identities = 22/75 (29%), Positives = 37/75 (49%)
Query: 74 TQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHALDATEAPFSIATD 133
T Q + G+ L++T + SE+ R ++ L AE D + Q+ +LE A+ E +A
Sbjct: 289 TLQAQAGKHGDDLRNTRNEISEMNRAIQRLQAEIDNIKNQRAKLEAAIAEAEERGELALK 348
Query: 134 NLQCSQGHQHANLMR 148
+ + Q A L R
Sbjct: 349 DARAKQEELEAALQR 363
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 35.8 bits (81), Expect = 0.055
Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 32/224 (14%)
Query: 52 EQELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLL 111
E+EL +QLAAE + T Q QLQ+ ++EL E E L A L
Sbjct: 851 EEELVKVREKQLAAENRLTEMETLQSQLMAEKLQLQEQLQAETELCAEAEELRAR---LT 907
Query: 112 AQKQRLE---HALDATEAPFSIATDNLQCSQGHQHANL--MRDHVETE--------LLKA 158
A+KQ LE H L+A +LQ + N+ + + +E E L K
Sbjct: 908 AKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKV 967
Query: 159 HPPAPSQCL---------NNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALA 209
A + L NC +++ + LT +EE + ++ A
Sbjct: 968 TTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKS------KSLAKL 1021
Query: 210 HKKEAELIRNIQELLKRAIVQAVSQIRLNREHTEICEMDWSDKV 253
K +I +++E L+R Q ++ R E D SD++
Sbjct: 1022 KNKHEAMITDLEERLRREEKQR-QELEKTRRKLEGDSTDLSDQI 1064
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 35.8 bits (81), Expect = 0.055
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Query: 5 ELPCKEYDVARNTGTYMSSGLATAXLEVWFQNCYA---RYHQAFANCNQSEQELQGHESQ 61
+L ++ ++ +N + G + LE+ +Q+ A R Q+ + + Q L+ E
Sbjct: 732 QLEREKEELRKNVDLLKALGKKSERLELSYQSVSAENLRLQQSLESSSHKTQTLES-ELG 790
Query: 62 QLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHAL 121
+L AE QAL + + + R QL+ + L++EV L + LL + +RL +
Sbjct: 791 ELEAERQALRRDLE--ALRLANAQLEGAEKDRKALEQEVAQLEKDKKLLEKEAKRLWQQV 848
Query: 122 DATEAPFSIATDNLQCSQGHQHA 144
+ +A +T L + A
Sbjct: 849 ELKDAVLDDSTAKLSAVEKESRA 871
Score = 29.3 bits (64), Expect = 5.1
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 54 ELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLLLA- 112
+L+G E + + L ++ R +L +L+RE E L DLL A
Sbjct: 691 QLEGLERDNKQLDAENLELRRLVETMRFTSTKLAQMERENQQLEREKEELRKNVDLLKAL 750
Query: 113 --QKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETEL 155
+ +RLE + S++ +NL+ Q + ++ +E+EL
Sbjct: 751 GKKSERLELSYQ------SVSAENLRLQQSLESSSHKTQTLESEL 789
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 35.4 bits (80), Expect = 0.072
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 29/221 (13%)
Query: 52 EQELQ-GHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDLL 110
+Q+LQ +E++ A + AQ + + +R+V E+LQ + Q E +A AE +L
Sbjct: 621 QQQLQVANEARDSAQTSVTQAQREKAELSRKV-EELQACVETARQEQHEAQAQVAELELQ 679
Query: 111 L-------AQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAP 163
L +K+R+ D + ++L+ ++G +E E +A
Sbjct: 680 LRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKG---------SLEEEKRRAADALE 730
Query: 164 SQCLNNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEGCRTR----ALAHKKEAELIRN 219
Q C S K R+ E ++EE G +G R AH+ E E++R
Sbjct: 731 EQ--QRCISELKAETRSLVEQHKRERKELEEE-RAGRKGLEARLQQLGEAHQAETEVLR- 786
Query: 220 IQELLKRAIVQAVSQIRLNREHTEICEMDWSDKVEAYNLDE 260
+EL + Q ++ + E+ W ++ E +E
Sbjct: 787 -RELAEAMAAQHTAESECEQLVKEVAA--WRERYEDSQQEE 824
Score = 30.8 bits (68), Expect = 1.8
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 13/162 (8%)
Query: 35 QNCYARYHQAFANCNQSEQELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKS 94
Q A+ ++ A +Q EQ + ++ Q A+T D+ ++ ++LQ+
Sbjct: 1587 QRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTH-------YDAKKQQNQELQEQLRSLE 1639
Query: 95 ELQREVEALAAETDLL---LAQKQRLEHALDATEAPFSIATDNLQCSQGH---QHANLMR 148
+LQ+E + L AE + L L Q + T + +L+ H Q +L +
Sbjct: 1640 QLQKENKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQVRSLEAQVAHADQQLRDLGK 1699
Query: 149 DHVETELLKAHPPAPSQCLNNCFSSRKPSARNKGPCQVMETL 190
V T+ LK+ P L+ S S P + L
Sbjct: 1700 FQVATDALKSREPQAKPQLDLSIDSLDLSCEEGTPLSITSKL 1741
>gi|34303932 transmembrane and coiled-coil domains 5A [Homo sapiens]
Length = 288
Score = 35.4 bits (80), Expect = 0.072
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 28/165 (16%)
Query: 84 EQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHALDATEAPFSIATDNL-QCSQGHQ 142
E+ + + E +R ++ L ET L + + L H++ + + + + C Q
Sbjct: 62 EEWEKENRTTMERERALQELEEETARLERKNKTLVHSITELQQKLTRKSQKITNCEQSSP 121
Query: 143 HANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEG 202
L V+ + L+A CQ E L V +E T+
Sbjct: 122 DGALEETKVKLQQLEA----------------------SYACQEKELLKVMKEYAFVTQL 159
Query: 203 CRTRALAHKKEAELIRNIQE-----LLKRAIVQAVSQIRLNREHT 242
C +AL KK E ++ I+E L+R + + VS + +EHT
Sbjct: 160 CEDQALYIKKYQETLKKIEEELEALFLEREVSKLVSMNPVEKEHT 204
>gi|31559829 keratin 25 [Homo sapiens]
Length = 450
Score = 35.0 bits (79), Expect = 0.093
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 63 LAAETQALAQGTQQDST-----------RRVGEQLQDTHSWKSEL---QREVEALAAETD 108
+ AE +ALA+ ++D+ +++ E + T S ++EL +R ++ L E
Sbjct: 255 MRAEYEALAEQNRRDAEAWFNEKSASLQQQISEDVGATTSARNELTEMKRTLQTLEIELQ 314
Query: 109 LLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETE 154
LLA K LE +L TE+ + +Q G L + ETE
Sbjct: 315 SLLATKHSLECSLTETESNYCAQLAQIQAQIGALEEQLHQVRTETE 360
>gi|94538345 keratin 35 [Homo sapiens]
Length = 455
Score = 35.0 bits (79), Expect = 0.093
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 84 EQLQDTHSWKSELQREVEALAAETDLLLAQKQRLEHALDATEAPFSIATDNLQC------ 137
EQLQ + EL+R V AL E + + LE L TEA +S +QC
Sbjct: 304 EQLQSCQAEIIELRRTVNALEIELQAQHSMRDALESTLAETEARYSSQLAQMQCMITNVE 363
Query: 138 -SQGHQHANLMRDHVETELLKAHPPAPSQCLNNCFSSRKPSARNKGPC 184
A+L R + E ++L A +C N + S +K PC
Sbjct: 364 AQLAEIRADLERQNQEYQVL-LDVRARLECEINTYRGLLESEDSKLPC 410
>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
Length = 508
Score = 33.9 bits (76), Expect = 0.21
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 26 ATAXLEVWFQNCYARYHQAFANCNQSEQELQGH-ESQQLAAETQALAQGTQQDSTRRVGE 84
A A E+ QN R Q A +Q+EQELQ ++ + + QALA + +
Sbjct: 147 ARALSELSEQNL--RLSQQLAQASQTEQELQRELDALRGQCQAQALAGAELRTRLESLQG 204
Query: 85 QLQDTHSWKSELQREVEALAAETD------------LLLAQKQRLEHALDATEA 126
+ Q S + +L+ ++ L E + LLL +++R EH+L+ A
Sbjct: 205 ENQMLQSRRQDLEAQIRGLREEVEKGEGRLQTTHEELLLLRRERREHSLELERA 258
>gi|153945736 keratin 27 [Homo sapiens]
Length = 459
Score = 33.5 bits (75), Expect = 0.27
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 63 LAAETQALAQGTQQDS-------TRRVGEQLQD----THSWKSEL---QREVEALAAETD 108
+ AE +ALA+ ++D+ + + +Q+ D T S ++EL +R ++ L E
Sbjct: 260 MRAEYEALAEQNRRDAEAWFNEKSASLQQQISDDAGATTSARNELIEMKRTLQTLEIELQ 319
Query: 109 LLLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETE 154
LLA K LE +L TE+ + +Q G L + ETE
Sbjct: 320 SLLATKHSLECSLTETESNYCAQLAQIQAQIGALEEQLHQVRTETE 365
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 33.5 bits (75), Expect = 0.27
Identities = 59/252 (23%), Positives = 94/252 (37%), Gaps = 14/252 (5%)
Query: 38 YARYHQAFANCNQSEQELQG-----HESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSW 92
+AR H+ A+ + +L+ HE+ Q + + QD+ RR+G Q T
Sbjct: 2202 WARLHRLNASIADLQSQLRSPLGPRHETAQQLEVLEQQSTSLGQDA-RRLGGQAVGTRDQ 2260
Query: 93 KSELQREVEALAAETDLLLAQKQRLEHAL-DATEAPFSIATDNLQCSQGHQHANLMRDHV 151
S+L EA LLA + ++ L + + N G Q L+R
Sbjct: 2261 ASQLLAGTEATLGHAKTLLAAIRAVDRTLSELMSQTGHLGLANASAPSGEQ---LLRTLA 2317
Query: 152 ETELLKAHPPAPSQCLNNCFSSRKPSARNKGPCQVMETLTVQEEANPGTEGCRTRALAHK 211
E E L A + + +A + +V E L+ E N +TR +
Sbjct: 2318 EVERLLWEMRARDLGAPQAAAEAELAAAQRLLARVQEQLSSLWEENQAL-ATQTRDRLAQ 2376
Query: 212 KEAELIRNIQELLKRAIVQAVSQIRLNREHTEICEMDWSDKVEAYNLDET--CGRHHSQS 269
EA L+ +++E L RA+ LN + E E K E + T H ++
Sbjct: 2377 HEAGLM-DLREALNRAVDATREAQELNSRNQERLEEALQRKQELSRDNATLQATLHAARD 2435
Query: 270 TEVQAHPALHHL 281
T LH L
Sbjct: 2436 TLASVFRLLHSL 2447
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 33.5 bits (75), Expect = 0.27
Identities = 42/198 (21%), Positives = 78/198 (39%), Gaps = 39/198 (19%)
Query: 50 QSEQELQGHESQQLAAETQALAQGTQQDSTRRVGEQLQDTHSWKSELQREVEALAAETDL 109
+ + E +G + L Q L + Q D ++ E Q+ K ++ E LA D
Sbjct: 273 EGDLEHRGRKISDLKKYAQKLKERIQ-DLDVQLKEARQENSELKGTAKKLGEKLAVAKDR 331
Query: 110 LLAQKQRLEHALDATEAPFSIATDNLQCSQGHQHANLMRDHVETELLKAHPPAPSQCLNN 169
++ Q+ R DA + + ++N ++R+ + E HP CL
Sbjct: 332 MMLQECRGTQQTDAMKT--ELVSEN----------KVLREENDLEAGNLHPQQDQSCLKE 379
Query: 170 CFSSRKPSARNKGPCQVMET-LTVQEEANPGTEGCR------TRALAHKKEAE------- 215
C PC T + ++EA+ TE + R + H+ E E
Sbjct: 380 C------------PCMKGGTDMQTKKEASAETEYMKQQYEEDLRKIKHQTEEEKKHLKDQ 427
Query: 216 LIRNIQELLKRAIVQAVS 233
L++ +++L+K+ V+ S
Sbjct: 428 LVKRLEDLVKKHTVEIKS 445
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.126 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,475,455
Number of Sequences: 37866
Number of extensions: 690705
Number of successful extensions: 3997
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 3787
Number of HSP's gapped (non-prelim): 303
length of query: 333
length of database: 18,247,518
effective HSP length: 103
effective length of query: 230
effective length of database: 14,347,320
effective search space: 3299883600
effective search space used: 3299883600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.