Guide to the Human Genome
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Name: TEKT3 Sequence: fasta or formatted (490aa) NCBI GI: 13994250
Description:

tektin 3

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         35           2
 C cysteine            1.8          9           2
 D aspartate           6.7         33           2
 E glutamate           7.3         36           1
 F phenylalanine       2.9         14           2
 G glycine             1.8          9           1
 H histidine           2.9         14           2
 I isoleucine          4.5         22           2
 K lysine              5.7         28           2
 L leucine             9.6         47           2
 M methionine          2.4         12           1
 N asparagine          5.3         26           1
 P proline             3.1         15           1
 Q glutamine           5.1         25           2
 R arginine            8.2         40           2
 S serine              6.7         33           2
 T threonine           9.4         46           3
 V valine              5.5         27           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.9         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tektin 3 
TEKT5                 0.450   tektin 5 
TEKT4                 0.277   tektin 4 
TEKT1                 0.273   tektin 1 
MAFIP                 0.230   PREDICTED: MAFF interacting protein 
TEKT2                 0.174   tektin 2 
LOC727768             0.159   PREDICTED: similar to tektin 4 
LOC100132288          0.059   hypothetical protein LOC100132288 
MAFIP                 0.051   PREDICTED: MAFF interacting protein 
LOC652794             0.049   PREDICTED: similar to tektin 4 
CEP250                0.025   centrosomal protein 2 
MYH6                  0.024   myosin heavy chain 6 
VIM                   0.023   vimentin 
MYH3                  0.023   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH2                  0.023   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.023   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH1                  0.022   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH8                  0.022   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH4                  0.021   myosin, heavy polypeptide 4, skeletal muscle 
MYH7                  0.021   myosin, heavy chain 7, cardiac muscle, beta 
MYH13                 0.020   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GOLGA5                0.019   Golgi autoantigen, golgin subfamily a, 5 
MYH7B                 0.018   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
SCLT1                 0.018   sodium channel associated protein 1 
CENPE                 0.017   centromere protein E 
MYO18A                0.016   myosin 18A isoform b 
MYO18A                0.016   myosin 18A isoform a 
CEP110                0.016   centrosomal protein 110kDa 
NIN                   0.016   ninein isoform 4 
NIN                   0.016   ninein isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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