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Search of human proteins with 239752455
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752455 PREDICTED: hypothetical protein XP_002348281 [Homo
sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752455 PREDICTED: hypothetical protein XP_002348281 [Homo ... 484 e-137
gi|239757944 PREDICTED: hypothetical protein [Homo sapiens] 49 4e-06
gi|4506143 neurotrypsin precursor [Homo sapiens] 33 0.29
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 32 0.49
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 32 0.49
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 31 0.84
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 31 0.84
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 31 0.84
gi|218563739 hypothetical protein LOC124944 isoform 3 [Homo sapi... 31 0.84
gi|218563737 hypothetical protein LOC124944 isoform 1 [Homo sapi... 31 0.84
gi|52856421 hypothetical protein LOC124944 isoform 2 [Homo sapiens] 31 0.84
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 31 1.1
gi|122937424 one cut homeobox 3 [Homo sapiens] 31 1.1
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 31 1.1
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 31 1.1
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 31 1.1
gi|169201810 PREDICTED: hypothetical protein [Homo sapiens] 30 1.9
gi|113422123 PREDICTED: hypothetical protein [Homo sapiens] 30 1.9
gi|113421705 PREDICTED: hypothetical protein [Homo sapiens] 30 1.9
gi|31543543 retinoic acid induced 17 [Homo sapiens] 30 1.9
gi|239754243 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239748775 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239742818 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|50345881 cytoplasmic polyadenylation element binding protein ... 29 3.2
gi|59938776 cAMP responsive element binding protein 5 isoform de... 29 3.2
gi|59938774 cAMP responsive element binding protein 5 isoform be... 29 3.2
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 29 3.2
gi|59938770 cAMP responsive element binding protein 5 isoform al... 29 3.2
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 29 3.2
gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] 29 3.2
>gi|239752455 PREDICTED: hypothetical protein XP_002348281 [Homo
sapiens]
Length = 241
Score = 484 bits (1246), Expect = e-137
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MSKAGYKDSVSEGILIWEDTNSSWLTHETEHVRAVFITDELAGAQGGEVLRLAVDSSAHK 60
MSKAGYKDSVSEGILIWEDTNSSWLTHETEHVRAVFITDELAGAQGGEVLRLAVDSSAHK
Sbjct: 1 MSKAGYKDSVSEGILIWEDTNSSWLTHETEHVRAVFITDELAGAQGGEVLRLAVDSSAHK 60
Query: 61 QLAGPLALLHNDTSHGVGLLGPRQVVLLAVVRLTQLEEVVQTQELADALPDAAAGHQAAG 120
QLAGPLALLHNDTSHGVGLLGPRQVVLLAVVRLTQLEEVVQTQELADALPDAAAGHQAAG
Sbjct: 61 QLAGPLALLHNDTSHGVGLLGPRQVVLLAVVRLTQLEEVVQTQELADALPDAAAGHQAAG 120
Query: 121 RIVYEQQLVDVVHGGQAVGTHAHAGGRVAASVVLDGPRDMGPQLSQVGGQLKDSVHCAHE 180
RIVYEQQLVDVVHGGQAVGTHAHAGGRVAASVVLDGPRDMGPQLSQVGGQLKDSVHCAHE
Sbjct: 121 RIVYEQQLVDVVHGGQAVGTHAHAGGRVAASVVLDGPRDMGPQLSQVGGQLKDSVHCAHE 180
Query: 181 HLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPPTVLLVRFARAPSGHPSADSRS 240
HLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPPTVLLVRFARAPSGHPSADSRS
Sbjct: 181 HLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPPTVLLVRFARAPSGHPSADSRS 240
Query: 241 P 241
P
Sbjct: 241 P 241
>gi|239757944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 600
Score = 48.9 bits (115), Expect = 4e-06
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 40 ELAGAQGGEVLR-LAVDSSAHKQLAGPLALLHNDTS--HGVGLLGPRQVVLLAVVRLTQ- 95
+LA QG R LA +S HKQ P H+ H G+ G ++ + V+ L Q
Sbjct: 296 QLADGQGWHPCRQLARQASGHKQEV-PAGQGHHQPHRCHSRGI-GSHKLPVTRVLSLVQH 353
Query: 96 LEEVVQTQELADALPDAAAGHQAAGRIVYEQQLVDVVH--GGQAVG--THAHAGGRVAAS 151
L + + L ALP AGHQ G ++QQLV +V G A+G T HA +
Sbjct: 354 LGHIPKAPCLTHALPHLPAGHQLLGAAAHQQQLVGIVSELGLWALGWVTEGHA----VRA 409
Query: 152 VVLDGPRDMGPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAG 195
V G +L Q+G +L+++VHCA S QV +G
Sbjct: 410 VDYRASDSHGLEL-QLGAELEEAVHCADIECASARCQCQVVESG 452
>gi|4506143 neurotrypsin precursor [Homo sapiens]
Length = 875
Score = 32.7 bits (73), Expect = 0.29
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 15/74 (20%)
Query: 162 PQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPPTV 221
P++ L DS+H +H H P AGP P+ QRPP T P
Sbjct: 16 PEVVGFDSVLNDSLHHSHRHSPP---------AGPH------YPYYLPTQQRPPTTRPPP 60
Query: 222 LLVRFARAPSGHPS 235
L RF R P P+
Sbjct: 61 PLPRFPRPPRALPA 74
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 32.0 bits (71), Expect = 0.49
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 183 PSHPVHSQVGTAGPAESLRKGQPHAETGVQRPP-PTPPTVLLVRFARAPSGHPSADSRS 240
P P S GP E+ + QP + VQRPP P PT LL + HPSA S S
Sbjct: 332 PQPPPLSTQPPQGPPEA--QLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLS 388
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 32.0 bits (71), Expect = 0.49
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 183 PSHPVHSQVGTAGPAESLRKGQPHAETGVQRPP-PTPPTVLLVRFARAPSGHPSADSRS 240
P P S GP E+ + QP + VQRPP P PT LL + HPSA S S
Sbjct: 332 PQPPPLSTQPPQGPPEA--QLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLS 388
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 31.2 bits (69), Expect = 0.84
Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 106 ADALPDAAAGHQAAGRIVYEQQLVDVVHGGQAVGTHAHAGGRVAASVVLD-GPRDMGPQL 164
AD++ A AG AAG ++ H G A G +S G +D L
Sbjct: 577 ADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESL 636
Query: 165 SQVGGQLKDSVHCA-----HEHLPSHPVHSQVGTAGPAESL----RKGQPHAETGVQRPP 215
+++ G + H A H H P H H P+ L + +P +E PP
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPP 696
Query: 216 PTPP 219
P PP
Sbjct: 697 PPPP 700
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 31.2 bits (69), Expect = 0.84
Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 106 ADALPDAAAGHQAAGRIVYEQQLVDVVHGGQAVGTHAHAGGRVAASVVLD-GPRDMGPQL 164
AD++ A AG AAG ++ H G A G +S G +D L
Sbjct: 577 ADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESL 636
Query: 165 SQVGGQLKDSVHCA-----HEHLPSHPVHSQVGTAGPAESL----RKGQPHAETGVQRPP 215
+++ G + H A H H P H H P+ L + +P +E PP
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPP 696
Query: 216 PTPP 219
P PP
Sbjct: 697 PPPP 700
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 31.2 bits (69), Expect = 0.84
Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 106 ADALPDAAAGHQAAGRIVYEQQLVDVVHGGQAVGTHAHAGGRVAASVVLD-GPRDMGPQL 164
AD++ A AG AAG ++ H G A G +S G +D L
Sbjct: 577 ADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESL 636
Query: 165 SQVGGQLKDSVHCA-----HEHLPSHPVHSQVGTAGPAESL----RKGQPHAETGVQRPP 215
+++ G + H A H H P H H P+ L + +P +E PP
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPP 696
Query: 216 PTPP 219
P PP
Sbjct: 697 PPPP 700
>gi|218563739 hypothetical protein LOC124944 isoform 3 [Homo
sapiens]
Length = 138
Score = 31.2 bits (69), Expect = 0.84
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 165 SQVGGQLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPP 219
S G Q+K +V V+ G PAES +KG +GV PPP P
Sbjct: 36 SPAGAQIKATV--------KRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAP 82
>gi|218563737 hypothetical protein LOC124944 isoform 1 [Homo
sapiens]
Length = 192
Score = 31.2 bits (69), Expect = 0.84
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 161 GPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPP 219
G L+ + +K+ + V+ G PAES +KG +GV PPP P
Sbjct: 58 GDDLNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAP 116
>gi|52856421 hypothetical protein LOC124944 isoform 2 [Homo sapiens]
Length = 172
Score = 31.2 bits (69), Expect = 0.84
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 161 GPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPP 219
G L+ + +K+ + V+ G PAES +KG +GV PPP P
Sbjct: 58 GDDLNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAP 116
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 30.8 bits (68), Expect = 1.1
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Query: 141 HAHAGGRVAASVVLDGPRDMGPQLSQVG-GQLKDSVHCAHEHLPSHPVH----------- 188
H+ G R+ L GP D Q++ V DS PSHP
Sbjct: 969 HSAQGDRLPP---LSGPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSLAKKPESTTKR 1025
Query: 189 --SQVGTAGPAESLRKGQP---HAETGVQRPPPTPPTVLLVRFARAPS-GHPSADSRS 240
S GT+ P +SLRKG+P E+ + P+ P L V+ + PS ADS S
Sbjct: 1026 SPSSKGTSEPEKSLRKGRPALASQESSLSSTSPSSP--LPVKVSLKPSRSRSKADSSS 1081
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 30.8 bits (68), Expect = 1.1
Identities = 48/185 (25%), Positives = 62/185 (33%), Gaps = 30/185 (16%)
Query: 61 QLAGPLALLHNDTSHGVGLLGPRQVVLLAVVRLTQLEEVVQTQELADALPDAAAGHQAAG 120
+LAGPL GL G LT L+ + +AD AA AG
Sbjct: 83 ELAGPLHPAMGMACEAPGLGG-------TYTTLTPLQHLPPLAAVADKFHQHAAAAAVAG 135
Query: 121 RIVYEQQLVDVVHGGQAVGTHAHAGGRVAASVVLDGPRDMGPQLSQVGGQLKDS----VH 176
HGG HAH AA P+ + +S ++D
Sbjct: 136 -----------AHGGHP---HAHPHP-AAAPPPPPPPQRLAASVSGSFTLMRDERAALAS 180
Query: 177 CAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPPTVLLVRFARAPSGHPSA 236
H + P +G+ P L P A G +PPP PP L A P GH +
Sbjct: 181 VGHLYGPYGKELPAMGS--PLSPLPNALPPALHGAPQPPPPPPPPPLA--AYGPPGHLAG 236
Query: 237 DSRSP 241
D P
Sbjct: 237 DKLLP 241
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 30.8 bits (68), Expect = 1.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 154 LDGPRDMGPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQR 213
L GP+D+G L +D HC + P+ PV ++ T A+S + A+ ++
Sbjct: 80 LPGPKDLGLVL-------RDQSHCKAKKFPNSPVKAEKATISQAKSEKATSLQAK--AEK 130
Query: 214 PPPTPPTV 221
P +P +V
Sbjct: 131 SPKSPNSV 138
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 30.8 bits (68), Expect = 1.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 154 LDGPRDMGPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQR 213
L GP+D+G L +D HC + P+ PV ++ T A+S + A+ ++
Sbjct: 80 LPGPKDLGLVL-------RDQSHCKAKKFPNSPVKAEKATISQAKSEKATSLQAK--AEK 130
Query: 214 PPPTPPTV 221
P +P +V
Sbjct: 131 SPKSPNSV 138
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 30.8 bits (68), Expect = 1.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 154 LDGPRDMGPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQR 213
L GP+D+G L +D HC + P+ PV ++ T A+S + A+ ++
Sbjct: 80 LPGPKDLGLVL-------RDQSHCKAKKFPNSPVKAEKATISQAKSEKATSLQAK--AEK 130
Query: 214 PPPTPPTV 221
P +P +V
Sbjct: 131 SPKSPNSV 138
>gi|169201810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 177
Score = 30.0 bits (66), Expect = 1.9
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 183 PSHPVHSQVGTAGPAESLRKGQPHAE------TGV---QRPPPTPP 219
P Q GP ES R GQP AE +G+ QRPPP P
Sbjct: 75 PGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
>gi|113422123 PREDICTED: hypothetical protein [Homo sapiens]
Length = 177
Score = 30.0 bits (66), Expect = 1.9
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 183 PSHPVHSQVGTAGPAESLRKGQPHAE------TGV---QRPPPTPP 219
P Q GP ES R GQP AE +G+ QRPPP P
Sbjct: 75 PGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
>gi|113421705 PREDICTED: hypothetical protein [Homo sapiens]
Length = 177
Score = 30.0 bits (66), Expect = 1.9
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 183 PSHPVHSQVGTAGPAESLRKGQPHAE------TGV---QRPPPTPP 219
P Q GP ES R GQP AE +G+ QRPPP P
Sbjct: 75 PGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 30.0 bits (66), Expect = 1.9
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 134 GGQAVGTHAHAGGRVAASVVLDGPRDMGPQLSQVGGQLKDSVHCAHEHLPSHPVHSQVGT 193
GG ++ H G S D P +M + +++++ A HP Q G
Sbjct: 907 GGTSMNDFMH--GPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQ-GL 963
Query: 194 AGPAESLRKGQPHAETGVQRPPPTPPTVLLVRFARAPSGHPSAD 237
P S + G P +G PPP+ P + APS HP +D
Sbjct: 964 HVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQ--AAPSSHPHSD 1005
>gi|239754243 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 29.6 bits (65), Expect = 2.5
Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 74 SHGVGLLGPRQVVLLAVVRLTQLEEVVQTQ---------ELADALPDAAAGHQAAGRIVY 124
+HGV QVV VV L Q V L D L A Q A + +
Sbjct: 136 AHGVQAAAAHQVVAAPVVLLAQQAAAVHLHLTHQRLAHVALLDQLLHAHESRQEAQHVAH 195
Query: 125 EQQLVDVVHGGQAVGTHAHAGGRVAASVVL 154
+ + VV GG+ GR A VL
Sbjct: 196 DAHELGVVVGGRGHAESVQRRGRAVADDVL 225
>gi|239748775 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 29.6 bits (65), Expect = 2.5
Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 74 SHGVGLLGPRQVVLLAVVRLTQLEEVVQTQ---------ELADALPDAAAGHQAAGRIVY 124
+HGV QVV VV L Q V L D L A Q A + +
Sbjct: 136 AHGVQAAAAHQVVAAPVVLLAQQAAAVHLHLTHQRLAHVALLDQLLHAHESRQEAQHVAH 195
Query: 125 EQQLVDVVHGGQAVGTHAHAGGRVAASVVL 154
+ + VV GG+ GR A VL
Sbjct: 196 DAHELGVVVGGRGHAESVQRRGRAVADDVL 225
>gi|239742818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 29.6 bits (65), Expect = 2.5
Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 74 SHGVGLLGPRQVVLLAVVRLTQLEEVVQTQ---------ELADALPDAAAGHQAAGRIVY 124
+HGV QVV VV L Q V L D L A Q A + +
Sbjct: 136 AHGVQAAAAHQVVAAPVVLLAQQAAAVHLHLTHQRLAHVALLDQLLHAHESRQEAQHVAH 195
Query: 125 EQQLVDVVHGGQAVGTHAHAGGRVAASVVL 154
+ + VV GG+ GR A VL
Sbjct: 196 DAHELGVVVGGRGHAESVQRRGRAVADDVL 225
>gi|50345881 cytoplasmic polyadenylation element binding protein 3
[Homo sapiens]
Length = 698
Score = 29.3 bits (64), Expect = 3.2
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 180 EHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTPPTVLLVRFARAPSGHPSADSR 239
++ P H GT P L + Q H Q+PPP P + A+ P P R
Sbjct: 137 QNFPHHVNPVFGGTFSPQIGLAQTQHH-----QQPPPPAPAPQPAQPAQPPQAQPPQQRR 191
Query: 240 SP 241
SP
Sbjct: 192 SP 193
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 29.3 bits (64), Expect = 3.2
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 176 HCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRP-----PPTP 218
H +H HL +HP H Q P + + Q T +P PP P
Sbjct: 175 HHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQP 222
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 29.3 bits (64), Expect = 3.2
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 176 HCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRP-----PPTP 218
H +H HL +HP H Q P + + Q T +P PP P
Sbjct: 307 HHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQP 354
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 29.3 bits (64), Expect = 3.2
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 176 HCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRP-----PPTP 218
H +H HL +HP H Q P + + Q T +P PP P
Sbjct: 281 HHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQP 328
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 29.3 bits (64), Expect = 3.2
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 176 HCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRP-----PPTP 218
H +H HL +HP H Q P + + Q T +P PP P
Sbjct: 314 HHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQP 361
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 29.3 bits (64), Expect = 3.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 170 QLKDSVHCAHEHLPSHPVHSQVGTAGPAESLRKGQPHAETGVQRPPPTP 218
QLK +++ + + +Q G A P E+ P A G+ R PP P
Sbjct: 2141 QLKPTLNQLKQTQKLQDMEAQAGWAAPGEARAMTAPRAGVGMPRLPPAP 2189
>gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens]
Length = 981
Score = 29.3 bits (64), Expect = 3.2
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 153 VLDGPRDMGPQLSQVGGQLKDSVHCAHEHLPSHPV-HSQVGTAGPAESLRKGQPHAET-- 209
++ GP D GP +++ + E P P H + R+G T
Sbjct: 367 LIPGPSDPGPAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSRRGLIRVTTQR 426
Query: 210 GVQRPPPTPPTVLLVRFARAPSGHPSADSRSP 241
+ +PPP PT + A AP+ P A++ +P
Sbjct: 427 ALGQPPPPEPTASSM--ASAPASSPPANATAP 456
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,509,552
Number of Sequences: 37866
Number of extensions: 521457
Number of successful extensions: 1732
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 1678
Number of HSP's gapped (non-prelim): 102
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.