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Search of human proteins with 239752263
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo
sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo ... 459 e-130
gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo ... 294 5e-80
gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo ... 287 6e-78
gi|239757968 PREDICTED: hypothetical protein [Homo sapiens] 162 3e-40
gi|239747023 PREDICTED: hypothetical protein XP_002343907 [Homo ... 162 3e-40
gi|239747021 PREDICTED: hypothetical protein XP_002343906 [Homo ... 162 3e-40
gi|150170670 piccolo isoform 2 [Homo sapiens] 66 2e-11
gi|150378539 piccolo isoform 1 [Homo sapiens] 66 2e-11
gi|146134388 YLP motif containing 1 [Homo sapiens] 64 1e-10
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 59 2e-09
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 3e-09
gi|110832843 TBP-associated factor 4 [Homo sapiens] 58 6e-09
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 58 7e-09
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 56 3e-08
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 56 3e-08
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 55 4e-08
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 55 5e-08
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 55 5e-08
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 54 1e-07
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 54 1e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 53 2e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 53 2e-07
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 53 2e-07
gi|157168329 formin 1 [Homo sapiens] 52 3e-07
gi|15529996 son of sevenless homolog 1 [Homo sapiens] 52 3e-07
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 52 3e-07
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 52 4e-07
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 52 5e-07
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 51 7e-07
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 51 7e-07
>gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo
sapiens]
Length = 220
Score = 459 bits (1182), Expect = e-130
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MLISVSQVTISNECQWHLNQLSDHTEPSEQHLPGTHAFAEVQSRSSKFPTNTLPWSKNAL 60
MLISVSQVTISNECQWHLNQLSDHTEPSEQHLPGTHAFAEVQSRSSKFPTNTLPWSKNAL
Sbjct: 1 MLISVSQVTISNECQWHLNQLSDHTEPSEQHLPGTHAFAEVQSRSSKFPTNTLPWSKNAL 60
Query: 61 FSKVVFIRVHLCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSP 120
FSKVVFIRVHLCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSP
Sbjct: 61 FSKVVFIRVHLCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSP 120
Query: 121 DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRW 180
DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRW
Sbjct: 121 DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRW 180
Query: 181 GRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW 220
GRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW
Sbjct: 181 GRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW 220
>gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo
sapiens]
Length = 210
Score = 294 bits (752), Expect = 5e-80
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS
Sbjct: 73 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 132
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP
Sbjct: 133 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 192
Query: 203 LSSRVSLYELLFPSWPPW 220
LSSRVSLYELLFPSWPPW
Sbjct: 193 LSSRVSLYELLFPSWPPW 210
>gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo
sapiens]
Length = 225
Score = 287 bits (734), Expect = 6e-78
Identities = 136/138 (98%), Positives = 136/138 (98%)
Query: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
VV PP SPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS
Sbjct: 88 VVLPPRSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 147
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP
Sbjct: 148 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 207
Query: 203 LSSRVSLYELLFPSWPPW 220
LSSRVSLYELLFPSWPPW
Sbjct: 208 LSSRVSLYELLFPSWPPW 225
Score = 126 bits (316), Expect = 2e-29
Identities = 76/124 (61%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
Query: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
VV P SPDSVV P RSPDSVV PPGSPDSVVLP RSPDSVVPPPGSPDSVVLPPRSPDS
Sbjct: 18 VVLPSRSPDSVVLPSRSPDSVVLPPGSPDSVVLPSRSPDSVVPPPGSPDSVVLPPRSPDS 77
Query: 143 VVPPARSPDSGG-RAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQV---PSRPPS 198
VVPP SPDS SP S+ PP + P V RSP V P P S
Sbjct: 78 VVPPPGSPDSVVLPPRSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDS 137
Query: 199 LSQP 202
+ P
Sbjct: 138 VVLP 141
Score = 90.1 bits (222), Expect = 1e-18
Identities = 62/117 (52%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Query: 90 PDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARS 149
P SV S SVV P SPDSVVLP RSPDSVV PPGSPDSVVLP RSPDSVVPP S
Sbjct: 5 PVSVGSTWPSTHSVVLPSRSPDSVVLPSRSPDSVVLPPGSPDSVVLPSRSPDSVVPPPGS 64
Query: 150 PDSGG-RAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQV---PSRPPSLSQP 202
PDS SP S+ PP + VP RSP V P P S+ P
Sbjct: 65 PDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPRSPDSVVPPPGSPDSVVLP 121
>gi|239757968 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 162 bits (409), Expect = 3e-40
Identities = 77/82 (93%), Positives = 79/82 (96%)
Query: 139 SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 198
+P SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS
Sbjct: 3 APYSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 62
Query: 199 LSQPLSSRVSLYELLFPSWPPW 220
LSQPLSSRVSL+ELL PS PPW
Sbjct: 63 LSQPLSSRVSLHELLLPSRPPW 84
>gi|239747023 PREDICTED: hypothetical protein XP_002343907 [Homo
sapiens]
Length = 157
Score = 162 bits (409), Expect = 3e-40
Identities = 77/82 (93%), Positives = 79/82 (96%)
Query: 139 SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 198
+P SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS
Sbjct: 3 APYSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 62
Query: 199 LSQPLSSRVSLYELLFPSWPPW 220
LSQPLSSRVSL+ELL PS PPW
Sbjct: 63 LSQPLSSRVSLHELLLPSRPPW 84
>gi|239747021 PREDICTED: hypothetical protein XP_002343906 [Homo
sapiens]
Length = 157
Score = 162 bits (409), Expect = 3e-40
Identities = 77/82 (93%), Positives = 79/82 (96%)
Query: 139 SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 198
+P SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS
Sbjct: 3 APYSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 62
Query: 199 LSQPLSSRVSLYELLFPSWPPW 220
LSQPLSSRVSL+ELL PS PPW
Sbjct: 63 LSQPLSSRVSLHELLLPSRPPW 84
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 66.2 bits (160), Expect = 2e-11
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PP P PPP+ P PPP P S P + P S PPP P P+ P S
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK 528
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLS 204
PP++ P S + S A P+A ++ G + P Q P+ PS QP S
Sbjct: 529 PPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTG-------SGKPLQPPTVSPSAKQPPS 581
Score = 42.4 bits (98), Expect = 3e-04
Identities = 35/121 (28%), Positives = 44/121 (36%), Gaps = 7/121 (5%)
Query: 85 PPPGSPDSVVPP-PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSV 143
P PG P + P +S PP P + P V PP P PP P
Sbjct: 309 PTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQP--- 365
Query: 144 VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP--QVPSRPPSLSQ 201
+ PA+ P + P S P A A+ PG + P PP QV + P Q
Sbjct: 366 LGPAKPPAQQTGSEKPSSEQPGPKALAQ-PPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Query: 202 P 202
P
Sbjct: 425 P 425
Score = 41.6 bits (96), Expect = 5e-04
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 30/177 (16%)
Query: 27 PSEQHLPGTHAFAEVQSRSSKFPTNTLPWSKNALFSKVVFIRVHLCKSTVLRVGAKVVPP 86
P ++ L T+ F ++ + P + LP ++ S R +S+ L + A+ PP
Sbjct: 2351 PMKEQLSTTY-FTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFF-RSSSLDISAQPPPP 2408
Query: 87 PGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP 146
P P PPP PPP PP P +PPP SP +LP + P
Sbjct: 2409 PPPP----PPP-------PPP--------PPPPPPPPLPPPTSPKPTILPKKKLTVASPV 2449
Query: 147 ARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 203
+ + +L A R+ G P R+ +PP VP +P S+ L
Sbjct: 2450 TTATP---LFDAVTTLETTAVLRSNGLP-----VTRI-CTTAPPPVPPKPSSIPSGL 2497
Score = 37.7 bits (86), Expect = 0.008
Identities = 34/143 (23%), Positives = 49/143 (34%), Gaps = 32/143 (22%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPG-------------SPDS 132
PP P + P V PP P PP P PP P +
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKA 390
Query: 133 VVLPP---RSPDSVVPPARSPDSGGRAGSPRSLA-------PPAAARAEGAPGWAGRWGR 182
+ PP ++P PA+ P + G+P+ LA P A P G+
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQ--QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGK 448
Query: 183 VPLARSPP-------QVPSRPPS 198
+P ++ P P++PPS
Sbjct: 449 IPAQQAGPGKTSAQQTGPTKPPS 471
Score = 37.7 bits (86), Expect = 0.008
Identities = 39/147 (26%), Positives = 54/147 (36%), Gaps = 12/147 (8%)
Query: 71 LCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSP 130
L + L+ AK P +P P + P P G + P P S +P P P
Sbjct: 421 LAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGP-GKTSAQQTGPTKPPSQLPGPAKP 479
Query: 131 DSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP 190
PP+ P PA+ P + P S P + PG A + P + PP
Sbjct: 480 -----PPQQPG----PAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPP 530
Query: 191 --QVPSRPPSLSQPLSSRVSLYELLFP 215
Q S PS QP ++ S + P
Sbjct: 531 SQQPGSAKPSAQQPSPAKPSAQQSTKP 557
Score = 33.9 bits (76), Expect = 0.11
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
P P P S PP + P S P P + V GS P P +V
Sbjct: 519 PSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG-----KPLQPPTVS 573
Query: 145 PPARSPDSGGRAGSPRSLAP 164
P A+ P S G P+++ P
Sbjct: 574 PSAKQPPS---QGLPKTICP 590
Score = 28.5 bits (62), Expect = 4.7
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 89 SPDSVVPPPRSPDSVVPPPGSPDSVVLPPRS---PDSVVPPPGSPDSVVLPPRSPDSVVP 145
SP S + P ++ +S P P + P+ PD PP SP + + RS P
Sbjct: 3625 SPISPLSPGKALESAFVPYEKPLPDDISPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKP 3684
Query: 146 PARSPDSGGRA 156
+ + D RA
Sbjct: 3685 LSPTADESSRA 3695
Score = 28.1 bits (61), Expect = 6.1
Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 82 KVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPD 141
K P P P + PP+S P P V ++P + P + + + +
Sbjct: 965 KQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRTETE 1024
Query: 142 SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
PP + DS P+ P P PL ++ + S+ P
Sbjct: 1025 KKPPPIK--DSKSLTAEPQKAVLPTKLEKSPKPE-----STCPLCKTELNIGSKDP 1073
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 66.2 bits (160), Expect = 2e-11
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PP P PPP+ P PPP P S P + P S PPP P P+ P S
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK 528
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLS 204
PP++ P S + S A P+A ++ G + P Q P+ PS QP S
Sbjct: 529 PPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTG-------SGKPLQPPTVSPSAKQPPS 581
Score = 42.4 bits (98), Expect = 3e-04
Identities = 35/121 (28%), Positives = 44/121 (36%), Gaps = 7/121 (5%)
Query: 85 PPPGSPDSVVPP-PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSV 143
P PG P + P +S PP P + P V PP P PP P
Sbjct: 309 PTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQP--- 365
Query: 144 VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP--QVPSRPPSLSQ 201
+ PA+ P + P S P A A+ PG + P PP QV + P Q
Sbjct: 366 LGPAKPPAQQTGSEKPSSEQPGPKALAQ-PPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Query: 202 P 202
P
Sbjct: 425 P 425
Score = 41.6 bits (96), Expect = 5e-04
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 30/177 (16%)
Query: 27 PSEQHLPGTHAFAEVQSRSSKFPTNTLPWSKNALFSKVVFIRVHLCKSTVLRVGAKVVPP 86
P ++ L T+ F ++ + P + LP ++ S R +S+ L + A+ PP
Sbjct: 2351 PMKEQLSTTY-FTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFF-RSSSLDISAQPPPP 2408
Query: 87 PGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP 146
P P PPP PPP PP P +PPP SP +LP + P
Sbjct: 2409 PPPP----PPP-------PPP--------PPPPPPPPLPPPTSPKPTILPKKKLTVASPV 2449
Query: 147 ARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 203
+ + +L A R+ G P R+ +PP VP +P S+ L
Sbjct: 2450 TTATP---LFDAVTTLETTAVLRSNGLP-----VTRI-CTTAPPPVPPKPSSIPSGL 2497
Score = 37.7 bits (86), Expect = 0.008
Identities = 34/143 (23%), Positives = 49/143 (34%), Gaps = 32/143 (22%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPG-------------SPDS 132
PP P + P V PP P PP P PP P +
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKA 390
Query: 133 VVLPP---RSPDSVVPPARSPDSGGRAGSPRSLA-------PPAAARAEGAPGWAGRWGR 182
+ PP ++P PA+ P + G+P+ LA P A P G+
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQ--QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGK 448
Query: 183 VPLARSPP-------QVPSRPPS 198
+P ++ P P++PPS
Sbjct: 449 IPAQQAGPGKTSAQQTGPTKPPS 471
Score = 37.7 bits (86), Expect = 0.008
Identities = 39/147 (26%), Positives = 54/147 (36%), Gaps = 12/147 (8%)
Query: 71 LCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSP 130
L + L+ AK P +P P + P P G + P P S +P P P
Sbjct: 421 LAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGP-GKTSAQQTGPTKPPSQLPGPAKP 479
Query: 131 DSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP 190
PP+ P PA+ P + P S P + PG A + P + PP
Sbjct: 480 -----PPQQPG----PAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPP 530
Query: 191 --QVPSRPPSLSQPLSSRVSLYELLFP 215
Q S PS QP ++ S + P
Sbjct: 531 SQQPGSAKPSAQQPSPAKPSAQQSTKP 557
Score = 33.9 bits (76), Expect = 0.11
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
P P P S PP + P S P P + V GS P P +V
Sbjct: 519 PSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSG-----KPLQPPTVS 573
Query: 145 PPARSPDSGGRAGSPRSLAP 164
P A+ P S G P+++ P
Sbjct: 574 PSAKQPPS---QGLPKTICP 590
Score = 28.5 bits (62), Expect = 4.7
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 89 SPDSVVPPPRSPDSVVPPPGSPDSVVLPPRS---PDSVVPPPGSPDSVVLPPRSPDSVVP 145
SP S + P ++ +S P P + P+ PD PP SP + + RS P
Sbjct: 3625 SPISPLSPGKALESAFVPYEKPLPDDISPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKP 3684
Query: 146 PARSPDSGGRA 156
+ + D RA
Sbjct: 3685 LSPTADESSRA 3695
Score = 28.1 bits (61), Expect = 6.1
Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 82 KVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPD 141
K P P P + PP+S P P V ++P + P + + + +
Sbjct: 965 KQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRTETE 1024
Query: 142 SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
PP + DS P+ P P PL ++ + S+ P
Sbjct: 1025 KKPPPIK--DSKSLTAEPQKAVLPTKLEKSPKPE-----STCPLCKTELNIGSKDP 1073
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 63.9 bits (154), Expect = 1e-10
Identities = 53/144 (36%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 79 VGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSV---VLPPRSPDSVVPPPGSPDSVVL 135
+G +PPP P S +PPP +PPP P S+ V+PP P + VPPPG P V +
Sbjct: 511 MGNMSMPPPFVPYSQMPPPLP---TMPPPVLPPSLPPPVMPPALP-ATVPPPGMPPPV-M 565
Query: 136 PPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSR 195
PP P SV PP P S AG P L PP+ + A PP +P
Sbjct: 566 PPSLPTSVPPPGMPP-SLSSAGPPPVLPPPSLSS----------------AGPPPVLP-- 606
Query: 196 PPSLSQPLSSRVSLYELLFPSWPP 219
PPSLS V L + PP
Sbjct: 607 PPSLSSTAPPPVMPLPPLSSATPP 630
Score = 56.2 bits (134), Expect = 2e-08
Identities = 48/141 (34%), Positives = 54/141 (38%), Gaps = 30/141 (21%)
Query: 84 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSV---------------------VLPPRSPDS 122
VPPPG P V+PP S + VPPPG P S+ VLPP S S
Sbjct: 555 VPPPGMPPPVMPP--SLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSS 612
Query: 123 VVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSL-APPAAARAEGAPGWAGRWG 181
PPP P LPP S S PP P G G P L A P +
Sbjct: 613 TAPPPVMP----LPPLS--SATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKP 666
Query: 182 RVPLARSPPQVPSRPPSLSQP 202
R L +P S PP+ P
Sbjct: 667 RPALLPTPVSFGSAPPTTYHP 687
Score = 51.2 bits (121), Expect = 7e-07
Identities = 46/143 (32%), Positives = 56/143 (39%), Gaps = 25/143 (17%)
Query: 80 GAKVVPPPGSPDSVVPPPRSP----DSVVPPPGSPDSVVLPPRS---PDSVVPPPGSPDS 132
G V PP S S PPP P S PPP P LPP S P +PPPG P
Sbjct: 586 GPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMP----LPPLSSATPPPGIPPPGVPQG 641
Query: 133 VVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQV 192
+ PP+ + VPPA S S PR P AP P PP
Sbjct: 642 I--PPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAP---------PTTYHPPLQ 690
Query: 193 PSRPPSLSQPLSSRVSLYELLFP 215
+ P S+ ++S+ L + P
Sbjct: 691 SAGP---SEQVNSKAPLSKSALP 710
Score = 38.9 bits (89), Expect = 0.003
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PPPGS P + P S+V P P +P P +PPP P LPP P V+
Sbjct: 1507 PPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPP--LPP--PPPVI 1562
Query: 145 PPARS 149
P S
Sbjct: 1563 KPQTS 1567
Score = 37.0 bits (84), Expect = 0.013
Identities = 48/174 (27%), Positives = 63/174 (36%), Gaps = 46/174 (26%)
Query: 85 PPPGSPDSVVP--------PPRSPDSVVPPPGS--------------------------P 110
PPP P V+P PP P + PPPG P
Sbjct: 83 PPPLPPPPVMPGGGYGDWQPP--PPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVP 140
Query: 111 DSVVLPPRSPDSVVPPPGS----PDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPA 166
+ PP SP PPGS S + PP+ P S PP S A S +PP+
Sbjct: 141 MELESPPESPP---VPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPS 197
Query: 167 AARAEGAPGW--AGRWGRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWP 218
+ P + + + L+ S +PS S S+P S S +LL P P
Sbjct: 198 QSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRP-SQGHSKSQLLAPPPP 250
Score = 36.6 bits (83), Expect = 0.017
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP 145
PP P S +PP +S +PPP P S PP S +PP S P +S + P
Sbjct: 150 PPVPPGSYMPPSQS---YMPPPQPPPSYY-PPTSSQPYLPPAQPSPSQSPPSQSYLAPTP 205
Query: 146 PARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVP--SRPPSLSQPL 203
S S ++ S + +++A + G LA PP P ++ +PL
Sbjct: 206 SYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPL 265
Query: 204 SS 205
S
Sbjct: 266 ES 267
Score = 32.0 bits (71), Expect = 0.43
Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 21/85 (24%)
Query: 55 WSKNALFSKVVFIRVHL---------CKSTVLRVGAKVVPP-----PGSPDSVVPPPRSP 100
W + L S +VHL K T V +V P P SP S PP P
Sbjct: 297 WYRQHLLSLQQRTKVHLPGHKKGPVVAKDTPEPVKEEVTVPATSQVPESPSSEEPPLPPP 356
Query: 101 DSVVPPPGSPDSVVLPPRSPDSVVP 125
+ VPPP LPP P S P
Sbjct: 357 NEEVPPP-------LPPEEPQSEDP 374
Score = 31.6 bits (70), Expect = 0.56
Identities = 32/117 (27%), Positives = 44/117 (37%), Gaps = 13/117 (11%)
Query: 90 PDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARS 149
P + PPP P V+P G D PP P PPPG S + ++ R
Sbjct: 78 PHHLPPPPLPPPPVMPGGGYGDWQPPPPPMP----PPPGPALSYQKQQQYKHQMLHHQRD 133
Query: 150 PDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLSSR 206
G P + + E P G + +P ++S P PPS P SS+
Sbjct: 134 -------GPPGLVPMELESPPESPPVPPGSY--MPPSQSYMPPPQPPPSYYPPTSSQ 181
Score = 30.0 bits (66), Expect = 1.6
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 84 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPP---GSPDSVVLPPRSP 140
+PPP P S PP S + PP P PP S + P P S S
Sbjct: 165 MPPPQPPPSYYPPTSSQPYL--PPAQPSPSQSPP-SQSYLAPTPSYSSSSSSSQSYLSHS 221
Query: 141 DSVVPPARSPDSGGRAGSPRS--LAPPAAARAEG 172
S +P +++ S G +S LAPP + G
Sbjct: 222 QSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPG 255
Score = 28.9 bits (63), Expect = 3.6
Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 22/163 (13%)
Query: 10 ISNECQWHLNQLSDHTEPSE--------QHLPGTHAFAEVQSRSSKFPTN-------TLP 54
+ + W +LSD PS+ +H+P +H +E+ + ++ L
Sbjct: 1390 VPDRMDWERERLSDRWYPSDVDRHSPMAEHMPSSHHSSEMMGSDASLDSDQGLGGVMVLS 1449
Query: 55 WSKNALFSKVVF-IRVHLCKSTVLRVGAKVVPPPGSPDSVVPPPR------SPDSVVPPP 107
++ + K +++ + L+ P D + P S + PPP
Sbjct: 1450 QRQHEIILKAAQELKMLREQKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPP 1509
Query: 108 GSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSP 150
GS + P S+V P P +P P +PP P
Sbjct: 1510 GSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPP 1552
Score = 28.5 bits (62), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 110 PDSVVLPPRSPDSVVPPPGSPDSVVLPPRS 139
P + VLPP S +PPPG P + +PP S
Sbjct: 1603 PSAPVLPPPPVHSSIPPPG-PVPMGMPPMS 1631
Score = 27.7 bits (60), Expect = 8.0
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 90 PDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPP 127
P + V PP S +PPPG P + +PP S PPP
Sbjct: 1603 PSAPVLPPPPVHSSIPPPG-PVPMGMPPMSK----PPP 1635
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 59.3 bits (142), Expect = 2e-09
Identities = 43/136 (31%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 72 CKSTVLRVG--AKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDS--VVPPP 127
C+ VLR A+ PPP D PP P ++P P + +LPP P + PP
Sbjct: 329 CRMDVLRASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPM 388
Query: 128 GSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLAR 187
G V PP S ++V PP+ S +G+ + A +A A A G P A
Sbjct: 389 GPFPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAG 448
Query: 188 SPPQVPSRPPSLSQPL 203
P P PP + PL
Sbjct: 449 PAPGFPFPPPWMGMPL 464
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 58.9 bits (141), Expect = 3e-09
Identities = 48/138 (34%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGS--PDSVVLPPRSPDSVVPPPGSPDSVVLPP-RSPDS 142
PP SP S PP ++P S+ PP P PP SP S PPP +P + PP + P S
Sbjct: 683 PPVSP-SATPPSQAPPSLAAPPLQVPPSPPASPPMSP-SATPPPQAPPPLAAPPLQVPPS 740
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
PPA P S PR AA + P PLA+ PPQ PP+L+ P
Sbjct: 741 --PPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQA---PPALATP 795
Query: 203 LSSRVSLYELLFPSWPPW 220
+ FP P+
Sbjct: 796 PLQALPSPPASFPGQAPF 813
Score = 50.1 bits (118), Expect = 2e-06
Identities = 49/135 (36%), Positives = 56/135 (41%), Gaps = 26/135 (19%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPP--GSPDSVVLPPRSPDSVVPPPGSPDSVVLPP-RSPDS 142
PP SP + PPP++P + PP P PP SP S PPP P + PP + P S
Sbjct: 714 PPMSPSA-TPPPQAPPPLAAPPLQVPPSPPASPPMSP-SATPPPRVPPLLAAPPLQVPPS 771
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAAR---------AEGAPGWA-----GRWGRVPLARS 188
PPA P S P APPA A PG A PLA
Sbjct: 772 --PPASLPMS--PLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP 827
Query: 189 PPQVPSRPPSLSQPL 203
PPQ PP L+ PL
Sbjct: 828 PPQA---PPVLAAPL 839
Score = 47.8 bits (112), Expect = 7e-06
Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 17/131 (12%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVL--------PP 137
PP SP + PP P +PP +P S P P P +P+++ + PP
Sbjct: 609 PPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 668
Query: 138 RSPD---SVVPPARSPDSGGRAGSPRSLAPP--AAARAEGAPGWAGRWGRVPLARSPPQV 192
SP PPA P S + +P S APP AA + P P A PPQ
Sbjct: 669 PSPPVQAPFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 726
Query: 193 PSRPPSLSQPL 203
P PP + PL
Sbjct: 727 P--PPLAAPPL 735
Score = 46.6 bits (109), Expect = 2e-05
Identities = 44/143 (30%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 87 PGSPDSVVPPPRSPDSVV-PPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP 145
P SP PPP +P S+ PPP +P ++ PP + PP SP + P P +P
Sbjct: 572 PPSP-LTTPPPETPSSIATPPPQAPPALASPPLQ--GLPSPPLSPLATPPPQAPPXLALP 628
Query: 146 PARSPDSGGRAGSPRSLAPPA-------AARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 198
P ++P S + LA P+ A AP V SPP P PS
Sbjct: 629 PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS 688
Query: 199 LSQPLSSRVSLY--ELLFPSWPP 219
+ P + SL L P PP
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPP 711
Score = 46.2 bits (108), Expect = 2e-05
Identities = 44/142 (30%), Positives = 59/142 (41%), Gaps = 33/142 (23%)
Query: 85 PPPGSPDSVVPPPRSPDS----------VVPPPGSPDSVVL--------PPRSPDSVVP- 125
PP P +PP ++P S P P +P+++ + PP SP P
Sbjct: 618 PPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 677
Query: 126 -PPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAP--PAAARAEGAPGWAGRWGR 182
PP SP V P +P S PP+ + SP + P P+A AP
Sbjct: 678 SPPASPP--VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP-------- 727
Query: 183 VPLARSPPQVPSRPPSLSQPLS 204
PLA P QVP PP+ S P+S
Sbjct: 728 PPLAAPPLQVPPSPPA-SPPMS 748
Score = 45.8 bits (107), Expect = 3e-05
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 34/164 (20%)
Query: 81 AKVVPPPGSPDSVVPP--PRSPDSVVPPPGSPDSVVLPPR-----SPDSVVPPPGSPDSV 133
A+ VPPP + + +P P SP P P +P S PP SP + PP +P S+
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPA-TPPSQAPPSM 372
Query: 134 VLPP-RSPDSV--VPPARSPDSGGRAGSPRSLAPPA--------AARAEGAPGWAGRWGR 182
PP ++P S+ +PP + P S SP APP+ A + G+P
Sbjct: 373 TTPPMQAPPSLQTIPPIQVPHS---LTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSF 429
Query: 183 VPLARSPPQV----PSRP---PSLSQPLSSRVSLYELLFPSWPP 219
+ ++ Q PSRP P S PL + +SL P+ PP
Sbjct: 430 LTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSL-----PASPP 468
Score = 45.1 bits (105), Expect = 5e-05
Identities = 46/127 (36%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 86 PPGSPDSVVP--PPRSPD---SVVPPPGSPDSVVLPP-RSPDSVVPPPGSPDSVVLPPRS 139
PP SP P PP SP S PP +P S+ PP + P S PP SP + P +
Sbjct: 667 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS---PPASPP--MSPSAT 721
Query: 140 PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVP--LARSPPQVPSRPP 197
P PP + SP + +PP + A P RVP LA P QVP PP
Sbjct: 722 PPPQAPPPLAAPPLQVPPSPPA-SPPMSPSATPPP-------RVPPLLAAPPLQVPPSPP 773
Query: 198 SLSQPLS 204
+ S P+S
Sbjct: 774 A-SLPMS 779
Score = 42.4 bits (98), Expect = 3e-04
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 85 PPPGSPDSVVPPP--------RSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLP 136
PP + S+ PPP +P PP +P + PP SP PPP +P S+ P
Sbjct: 533 PPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPP-SP-LTTPPPETPSSIATP 590
Query: 137 P-RSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSR 195
P ++P ++ SP G P L+P A + P A +P ++PP P+
Sbjct: 591 PPQAPPALA----SPPLQGLPSPP--LSPLATPPPQAPPXLA-----LPPLQAPPSPPAS 639
Query: 196 PP 197
PP
Sbjct: 640 PP 641
Score = 41.6 bits (96), Expect = 5e-04
Identities = 45/151 (29%), Positives = 58/151 (38%), Gaps = 26/151 (17%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSV------VPPPGSPDSVVLP--- 136
PP SP + P +P VPP + + +PP P S+ PPP +P ++ P
Sbjct: 741 PPASPP--MSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQ 798
Query: 137 --PRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPP---- 190
P P S A S SP + PP A AP + + SPP
Sbjct: 799 ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP-------LLQVPPSPPASPT 851
Query: 191 -QVPSRPPSLSQPLS-SRVSLYELLFPSWPP 219
Q P RPP+ S S L L P PP
Sbjct: 852 LQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 882
Score = 38.5 bits (88), Expect = 0.005
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PP PD+ V PR ++ P P P P RSP S + P +P+ +
Sbjct: 858 PPTPGPDTSVSGPRLTLALAPGPPPP-----PSRSPSSTLSGPDLAGHSSSATSTPEEL- 911
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA-RSPPQVPSRPPSLSQPL 203
R DSG G+ S PP A A P R PLA R P P P + P
Sbjct: 912 ---RGYDSGPEGGAAAS-PPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG 967
Query: 204 SS 205
S+
Sbjct: 968 SA 969
Score = 34.7 bits (78), Expect = 0.066
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
Query: 82 KVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPD 141
+V PP + P S P P + +PP PD+ +P LPP SP
Sbjct: 284 QVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPP--PDNA----ATPLPATLPP-SPP 336
Query: 142 SVVPPARSPDSGGRAGSPRSL-APPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
P +P S S ++L +PPA ++ P P ++PP + + PP
Sbjct: 337 LATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMT-----TPPMQAPPSLQTIPP 388
Score = 33.1 bits (74), Expect = 0.19
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 14/103 (13%)
Query: 100 PDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSP 159
P V PP + P S P P + +PP + PA P S A +P
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLA-TP 340
Query: 160 RSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
LAPP+ + AP P ++ P P+ PPS + P
Sbjct: 341 LPLAPPSPS----AP---------PSLQTLPSPPATPPSQAPP 370
Score = 28.9 bits (63), Expect = 3.6
Identities = 32/115 (27%), Positives = 42/115 (36%), Gaps = 17/115 (14%)
Query: 80 GAKVVPPPGSPDSVVPPPRSPDSVVPP------PGSPDSVVLPPRSPDSVVPPPGSPDSV 133
GA PPP + + P PP PG+P + PP + PGS D +
Sbjct: 921 GAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP--LPWPPAT------GPGSADGL 972
Query: 134 --VLPPRSPDSVVPPARSPDSGGRAG-SPRSLAPPAAARAEGAPGWAGRWGRVPL 185
+ P+S P + D G G S A A A A R G +PL
Sbjct: 973 CTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPL 1027
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 58.2 bits (139), Expect = 6e-09
Identities = 54/176 (30%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 36 HAFAEVQSRSSKFPTNTLPWSKNALFSKVVFIRVHLCKSTVLRVGAKVVPPPGSPDSVVP 95
HA A S + P LP K A V+ T VGA P P +P
Sbjct: 209 HAAAPAVSLVNNGPAALLPLPKPAAPGTVI--------QTPPFVGAAAPPAPAAPSPPAA 260
Query: 96 PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGR 155
P + + PPP PP +P ++ PPG P PP + +V PPA + +GG
Sbjct: 261 PAPAAPAAAPPP--------PPPAPATLARPPGHPAG---PPTAAPAVPPPA-AAQNGGS 308
Query: 156 AGSPRSLAPPAA--ARAEGAPGWAGRWGRVPL----ARSPPQVPSRPPSLSQPLSS 205
AG+ + AP A A G PG G P A SP +V P +Q L++
Sbjct: 309 AGAAPAPAPAAGGPAGVSGQPG-PGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAA 363
Score = 30.4 bits (67), Expect = 1.2
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 135 LPPRSPDSVVPPARSPDSGGRAGSPRSLAPPA-AARAEGAPGWAGR---WGRVPLARSPP 190
L PR+P+ A + + +GSP A AA AEGAPG A GR P
Sbjct: 43 LAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGP 102
Query: 191 QVPSRPPSLSQPL 203
Q P PPS +PL
Sbjct: 103 QRPG-PPSPRRPL 114
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 57.8 bits (138), Expect = 7e-09
Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Query: 72 CKSTVLRVG--AKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPD--SVVPPP 127
C+ VLR A+ PPP D PP P ++P P + +LPP P + PP
Sbjct: 329 CRMDVLRASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPM 388
Query: 128 GSPDSVVLPPRSPDSVVPPARSPDSGGR-AGSPRSLAPPAAARAEGAPGWAGRWGRVPLA 186
G V PP S ++V PP+ S + R +G+ + A +A A A G P A
Sbjct: 389 GPFPPVPPPPSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEA 448
Query: 187 RSPPQVPSRPPSLSQPL 203
P P PP + PL
Sbjct: 449 GPAPGFPFPPPWMGMPL 465
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 86 PPGSPDSVVPP-PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PP P ++PP P + PP G V PP S ++V PP S ++ P + +
Sbjct: 366 PPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGAATTTA 425
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEG---APGWAGRWGRVPLARSPPQVP 193
+ + A P S + P A A G P W G P A P VP
Sbjct: 426 AGTSATAASATASGPGSGSAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVP 477
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 55.8 bits (133), Expect = 3e-08
Identities = 47/147 (31%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Query: 77 LRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLP 136
L G ++PPP P ++PPP P S PPP P S LPP PPP P S +
Sbjct: 463 LHQGKGMMPPP--PMGMMPPPPPPPSGQPPP--PPSGPLPPWQQQQQQPPPPPPPSSSMA 518
Query: 137 PRSPDSVVPPARSPDSGGRAGS--PRSLAPPAAARAEGAPGWAGRWGRVPL--ARSPPQV 192
+P + + GS P AAA + GAP G VPL PP
Sbjct: 519 SSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLP 578
Query: 193 PSRPPSLSQPLSSRVSLYELLFPSWPP 219
P PP P + P PP
Sbjct: 579 PGAPPPPPPPPPGSAGMMYAPPPPPPP 605
Score = 38.1 bits (87), Expect = 0.006
Identities = 42/143 (29%), Positives = 50/143 (34%), Gaps = 47/143 (32%)
Query: 45 SSKFPTNTLPWSKNALFSKVVFIRVHLCKSTVLRVGAKVVPP-----------PGSPDSV 93
SS + LPW +N +T G +PP PG+P
Sbjct: 515 SSMASSTPLPWQQNTT-------------TTTTSAGTGSIPPWQQQQAAAAASPGAPQMQ 561
Query: 94 VPPPRSP--DSVVPP--PGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARS 149
P P V PP PG+P PP P PPPGS + PP P PP
Sbjct: 562 GNPTMVPLPPGVQPPLPPGAP-----PPPPP----PPPGSAGMMYAPPPPP----PPPMD 608
Query: 150 PDS------GGRAGSPRSLAPPA 166
P + G AG P PPA
Sbjct: 609 PSNFVTMMGMGVAGMPPFGMPPA 631
Score = 33.1 bits (74), Expect = 0.19
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPP 137
PPPGS + PP P PPP P + V + +PP G P + PP
Sbjct: 588 PPPGSAGMMYAPPPPP----PPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPP 636
Score = 27.7 bits (60), Expect = 8.0
Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
P P S S P +P + P P +P + PP + P +S R +
Sbjct: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGM- 382
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQ 201
GG G P S P + G G + P PP + PP ++Q
Sbjct: 383 ---HGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN--PNGPPPPWMQPPPPPMNQ 434
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 55.8 bits (133), Expect = 3e-08
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 20/126 (15%)
Query: 85 PPPGSPDSVVPPP---RSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVL-----P 136
PPP P S PPP + P+ VV P + ++ P + P+ PPP +P+ L P
Sbjct: 729 PPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFP 788
Query: 137 PRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRP 196
P P+ SP+ G +GSP ++ PAA+ + L PP P P
Sbjct: 789 P--PEEAFFSVASPEPAGPSGSPELVSSPAASSSSA----------TALQIQPPGSPDPP 836
Query: 197 PSLSQP 202
P+ P
Sbjct: 837 PAPPAP 842
Score = 47.4 bits (111), Expect = 1e-05
Identities = 44/130 (33%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 86 PPGSPDSVVPPPRSPDSV----VPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV-LPPRSP 140
P GSP+ V P S S + PPGSPD PP +P + P +P V LP + P
Sbjct: 805 PSGSPELVSSPAASSSSATALQIQPPGSPD----PPPAPPAPAPASSAPGHVAKLPQKEP 860
Query: 141 DSVVPPARSP--DSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 198
P D G +P SL R+ GAPG A P P P +P
Sbjct: 861 VGCSKGGGPPREDVGAPLVTP-SLLQMVRLRSVGAPGGA------PTPALGPSAPQKP-- 911
Query: 199 LSQPLSSRVS 208
L + LS R S
Sbjct: 912 LRRALSGRAS 921
Score = 44.3 bits (103), Expect = 8e-05
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 25/147 (17%)
Query: 78 RVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDS--VVLPPRSPDSVVP-PPGSPDSVV 134
R G +++ P G + P P+ P PPP P S P + +VVP P + D+
Sbjct: 645 RSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASP 704
Query: 135 LPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPS 194
P +P + + P + + SP PP + PP P+
Sbjct: 705 QSPPTPQTTLTPLQESPVISKDQSPPPSPPP--------------------SYHPPPPPT 744
Query: 195 RPPS--LSQPLSSRVSLYELLFPSWPP 219
+ P + P +S + L P+WPP
Sbjct: 745 KKPEVVVEAPSASETAEEPLQDPNWPP 771
Score = 42.4 bits (98), Expect = 3e-04
Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 8/137 (5%)
Query: 84 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSVV-LPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
+ PPGSPD PP +P + P +P V LP + P G P V P S
Sbjct: 827 IQPPGSPD----PPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPS 882
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
++ R G G+P P+A + +GR VP S R + S
Sbjct: 883 LLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKACSLA 942
Query: 203 LSSRVSLYELLFPSWPP 219
S +S + P+ PP
Sbjct: 943 ASEGLSSAQ---PNGPP 956
Score = 34.7 bits (78), Expect = 0.066
Identities = 36/142 (25%), Positives = 51/142 (35%), Gaps = 19/142 (13%)
Query: 80 GAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPG-SPDSVVLPPR 138
GA P P +P + P SP PP SP+ + P S P P + PP
Sbjct: 544 GAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPA 603
Query: 139 SPDSVVPPARSPDSGGRA-GSPRSLAPPAAARAEGAPGWAGRWG---------------- 181
SP PP + R+ G+ S + + + P + R G
Sbjct: 604 SPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPH 663
Query: 182 -RVPLARSPPQVPSRPPSLSQP 202
+VP SPP R P+ + P
Sbjct: 664 PKVPAPFSPPPSKPRSPNPAAP 685
Score = 29.6 bits (65), Expect = 2.1
Identities = 30/107 (28%), Positives = 39/107 (36%), Gaps = 24/107 (22%)
Query: 67 IRVHLCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSV-------------VPPPGSPD-- 111
+R+ C S G P G P++ PP+SP S + P SP+
Sbjct: 934 VRLKAC-SLAASEGLSSAQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERPVSPETQ 992
Query: 112 -----SVVLPPRSPDSVVPPPGSPDSVVLPP---RSPDSVVPPARSP 150
++V RS PP S PP R P VPP SP
Sbjct: 993 ADLQRNLVAELRSISEQRPPQAPKKSPKAPPPVARKPSVGVPPPASP 1039
Score = 29.3 bits (64), Expect = 2.8
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP 126
P SP + P R P VPPP SP PR+ PP
Sbjct: 1015 PKKSPKAPPPVARKPSVGVPPPASPSY----PRAEPLTAPP 1051
Score = 27.7 bits (60), Expect = 8.0
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 92 SVVPPPRSPDSVVPPPGSPDSVVLPP---RSPDSVVPPPGSPDSVVLPPRSPDSVVPP 146
++V RS PP S PP R P VPPP SP PR+ PP
Sbjct: 998 NLVAELRSISEQRPPQAPKKSPKAPPPVARKPSVGVPPPASPSY----PRAEPLTAPP 1051
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 55.5 bits (132), Expect = 4e-08
Identities = 41/118 (34%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP--PPGSPDSVVLPPR---S 139
PPPG P P + PPPG P PP+ S P PPG P PP+
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGDKSRSPRSPPGKPQGP--PPQGGNQ 107
Query: 140 PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
P PP P G R PP + +G P G R P RSPP P PP
Sbjct: 108 PQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPP-QGDKSRSP--RSPPGKPQGPP 162
Score = 50.8 bits (120), Expect = 9e-07
Identities = 38/129 (29%), Positives = 43/129 (33%), Gaps = 20/129 (15%)
Query: 85 PPP---GSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP----------PPGSPD 131
PPP P PPP P P G PP P P PPG P
Sbjct: 161 PPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQ 220
Query: 132 SVVLPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARS 188
PP+ P PP P G + PP + +G P G + ARS
Sbjct: 221 GP--PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGG--SKSQSARS 276
Query: 189 PPQVPSRPP 197
PP P PP
Sbjct: 277 PPGKPQGPP 285
Score = 45.8 bits (107), Expect = 3e-05
Identities = 38/131 (29%), Positives = 47/131 (35%), Gaps = 25/131 (19%)
Query: 85 PPP---GSPDSVVPPPRSPDSV----------VPPPGSPDSVVLPPRSPDSVVP--PPGS 129
PPP P PPP P PPPG P PP+ S P PPG
Sbjct: 100 PPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP--PPQGDKSRSPRSPPGK 157
Query: 130 PDSVVLPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA 186
P PP+ P PP P G + PP + +G P + + +
Sbjct: 158 PQGP--PPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPP---PQGDKSRSS 212
Query: 187 RSPPQVPSRPP 197
+SPP P PP
Sbjct: 213 QSPPGKPQGPP 223
Score = 43.5 bits (101), Expect = 1e-04
Identities = 36/119 (30%), Positives = 43/119 (36%), Gaps = 29/119 (24%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRS----PDSVVPPPGSPDSVVLPPRSP 140
PPPG P P + PPPG P PP S PPG P P
Sbjct: 235 PPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPAQGGSKSQSARSPPGKPQG----PPQQ 287
Query: 141 DSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQ--VPSRPP 197
+ P P +GG P++ P A + +G P PPQ PSRPP
Sbjct: 288 EGNNPQGPPPPAGGNPQQPQA---PPAGQPQGPP-------------RPPQGGRPSRPP 330
Score = 35.4 bits (80), Expect = 0.038
Identities = 32/111 (28%), Positives = 40/111 (36%), Gaps = 23/111 (20%)
Query: 88 GSPDSVVPPP-RSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP 146
G+P P P PPPG P PPP + P+ P P
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQG------------PPPQGGNK----PQGPPPPGKP 77
Query: 147 ARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
P G ++ SPRS PP + +G P G + P PP P PP
Sbjct: 78 QGPPPQGDKSRSPRS--PP--GKPQGPPPQGGNQPQGP--PPPPGKPQGPP 122
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 55.1 bits (131), Expect = 5e-08
Identities = 44/130 (33%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 77 LRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLP 136
L G ++PPP P ++PPP P S PPP P S LPP PPP P S +
Sbjct: 463 LHQGKGMMPPP--PMGMMPPPPPPPSGQPPP--PPSGPLPPWQQQQQQPPPPPPPSSSMA 518
Query: 137 PRSPDSVVPPARSPDSGGRAGS--PRSLAPPAAARAEGAPGWAGRWGRVPL--ARSPPQV 192
+P + + GS P AAA + GAP G VPL PP
Sbjct: 519 SSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLP 578
Query: 193 PSRPPSLSQP 202
P PP P
Sbjct: 579 PGAPPPPPPP 588
Score = 42.4 bits (98), Expect = 3e-04
Identities = 39/149 (26%), Positives = 53/149 (35%), Gaps = 38/149 (25%)
Query: 45 SSKFPTNTLPWSKNALFSKVVFIRVHLCKSTVLRVGAKVVPP-----------PGSPDSV 93
SS + LPW +N +T G +PP PG+P
Sbjct: 515 SSMASSTPLPWQQNTT-------------TTTTSAGTGSIPPWQQQQAAAAASPGAPQMQ 561
Query: 94 VPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSG 153
P P +PP P LPP +P PPP +++PPR D P S D
Sbjct: 562 GNPTMVP---LPPGVQPP---LPPGAPPPPPPPPPGSAGMMIPPRGGDG--PSHESED-- 611
Query: 154 GRAGSPRSLAPPAAARAEGAPGWAGRWGR 182
PR L + + P W G +G+
Sbjct: 612 ----FPRPLVTLPGRQPQQRPWWTGWFGK 636
Score = 27.7 bits (60), Expect = 8.0
Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
P P S S P +P + P P +P + PP + P +S R +
Sbjct: 324 PVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGM- 382
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQ 201
GG G P S P + G G + P PP + PP ++Q
Sbjct: 383 ---HGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN--PNGPPPPWMQPPPPPMNQ 434
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 55.1 bits (131), Expect = 5e-08
Identities = 39/120 (32%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPD----SVVPPPGSPDSVVLPPR-- 138
PPPG P P + PPPG P PP D S PPG P PP+
Sbjct: 196 PPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDNKSQSARSPPGKPQGP--PPQGG 250
Query: 139 -SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
P PP P G + PP + +G P G R +RSPP P PP
Sbjct: 251 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSR--SSRSPPGKPQGPP 308
Score = 50.8 bits (120), Expect = 9e-07
Identities = 39/130 (30%), Positives = 44/130 (33%), Gaps = 21/130 (16%)
Query: 85 PPP---GSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP-----------PPGSP 130
PPP P PPP P P G+ PP P P PPG P
Sbjct: 245 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKP 304
Query: 131 DSVVLPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLAR 187
PP+ P PP P G + PP + +G P G R AR
Sbjct: 305 QGP--PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSR--SAR 360
Query: 188 SPPQVPSRPP 197
SPP P PP
Sbjct: 361 SPPGKPQGPP 370
Score = 50.4 bits (119), Expect = 1e-06
Identities = 38/122 (31%), Positives = 45/122 (36%), Gaps = 20/122 (16%)
Query: 86 PPGSPDSVVPPPRS---PDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
PPG P PPP+ P PPPG P + PPPG P PP D+
Sbjct: 176 PPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDN 230
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGR-------WGRVPLARSPPQVPSR 195
ARSP G P+ P + +G P G+ G P PP P
Sbjct: 231 KSQSARSP-----PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 285
Query: 196 PP 197
PP
Sbjct: 286 PP 287
Score = 48.5 bits (114), Expect = 4e-06
Identities = 40/131 (30%), Positives = 46/131 (35%), Gaps = 24/131 (18%)
Query: 85 PPP---GSPDSVVPPPRSPDSV----------VPPPGSPDSVVLPPRSPDSVVP--PPGS 129
PPP P PPP P PPPG P PP+ S P PPG
Sbjct: 60 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGDKSRSPRSPPGK 117
Query: 130 PDSVVLPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA 186
P PP+ P PP P G + PP + +G P R +
Sbjct: 118 PQGP--PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSR--SS 173
Query: 187 RSPPQVPSRPP 197
RSPP P PP
Sbjct: 174 RSPPGKPQGPP 184
Score = 44.7 bits (104), Expect = 6e-05
Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPP---RSPDSVVPPPGSPDSVVLPP----- 137
PPG P PPP+ + PP P PP + PPPG P PP
Sbjct: 114 PPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDN 168
Query: 138 RSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
+S S PP + + G+ PP + +G P + G P PP P PP
Sbjct: 169 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP---PQGGNKPQGPPPPGKPQGPP 225
Score = 43.9 bits (102), Expect = 1e-04
Identities = 38/122 (31%), Positives = 46/122 (37%), Gaps = 35/122 (28%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPD---SVVPPPGSPDSVVLPPR--- 138
PPPG P P + PPPG P PP+ S PPG P PP+
Sbjct: 320 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGGSKSRSARSPPGKPQG---PPQQEG 374
Query: 139 -SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQ--VPSR 195
+P PPA G+P+ P A + +G P PPQ PSR
Sbjct: 375 NNPQGPPPPA--------GGNPQQPQAPPAGQPQGPP-------------RPPQGGRPSR 413
Query: 196 PP 197
PP
Sbjct: 414 PP 415
Score = 43.1 bits (100), Expect = 2e-04
Identities = 37/126 (29%), Positives = 43/126 (34%), Gaps = 26/126 (20%)
Query: 85 PPPGSPDSVVP----------PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVV 134
PPPG P P PP P PP D+ RS PPG P
Sbjct: 134 PPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDNKSRSSRS------PPGKPQGP- 183
Query: 135 LPPR---SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQ 191
PP+ P PP P G + PP + +G P + ARSPP
Sbjct: 184 -PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD--NKSQSARSPPG 240
Query: 192 VPSRPP 197
P PP
Sbjct: 241 KPQGPP 246
Score = 41.2 bits (95), Expect = 7e-04
Identities = 36/115 (31%), Positives = 43/115 (37%), Gaps = 13/115 (11%)
Query: 85 PPPGS--PDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
PP G P PP P PPP + PP P P G P P+ P
Sbjct: 40 PPQGGNKPQGPPSPPGKPQG--PPPQGGNQPQGPPPPPGK---PQGPPPQGGNKPQGPPP 94
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
P P G ++ SPRS PP + +G P G + P PP P PP
Sbjct: 95 PGKPQGPPPQGDKSRSPRS--PP--GKPQGPPPQGGNQPQGP--PPPPGKPQGPP 143
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 53.5 bits (127), Expect = 1e-07
Identities = 54/220 (24%), Positives = 73/220 (33%), Gaps = 31/220 (14%)
Query: 6 SQVTISNECQWHLNQLSDHTEPSEQHLPGTHAFAEVQSRSSKFPTNTLPWSKNALFSKVV 65
S++T +E Q + ++ E Q L G + + L + L +V
Sbjct: 481 SELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEKQQIATEKQDLEAEVSQLTGEVA 540
Query: 66 FIRVHL---CKSTVLRVGAKVVPPPGSPDSVVPPPRSP-----DSVVPPPGSPDSVVLPP 117
+ L K A + PP P PP P +++PPP +P PP
Sbjct: 541 KLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPP 600
Query: 118 RSPDSVVPPPGSPDSVVL---------------PPRSPDSVVPPARSPDSGGRAGSPRSL 162
P PPP P V + PP S D+ +PP G SP SL
Sbjct: 601 PPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSL 660
Query: 163 APPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
P P G AR PP P P S P
Sbjct: 661 --PGGTAIPPPPPLPGS------ARIPPPPPPLPGSAGIP 692
Score = 52.4 bits (124), Expect = 3e-07
Identities = 39/117 (33%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVL--PPRSPDSVV---PPPGSPDSVVLPP 137
++PPP +P PP P PPP P V + PP P PPP S D+ + PP
Sbjct: 586 IIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPP 645
Query: 138 RS-PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVP 193
P+ V P+ S GG A P P +A P G G P PP +P
Sbjct: 646 PPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP---PPPPLP 699
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 30/141 (21%)
Query: 80 GAKVVPP----PGSPDSVVPPPRSPDSV---VPPPGSPDSVVLPPRSP-----DSVVPPP 127
G +PP PGS PPP P S PPP P +PP P + PPP
Sbjct: 662 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPP 721
Query: 128 GSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLAR 187
P +PP P +PP PP AP +G P
Sbjct: 722 PFPGGPGIPPPPPGMGMPP----------------PPPFGFGVPAAP--VLPFGLTPKKL 763
Query: 188 SPPQVPSRPPSLSQPLSSRVS 208
P+V R P+ S+ ++ +S
Sbjct: 764 YKPEVQLRRPNWSKLVAEDLS 784
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 53.5 bits (127), Expect = 1e-07
Identities = 54/220 (24%), Positives = 73/220 (33%), Gaps = 31/220 (14%)
Query: 6 SQVTISNECQWHLNQLSDHTEPSEQHLPGTHAFAEVQSRSSKFPTNTLPWSKNALFSKVV 65
S++T +E Q + ++ E Q L G + + L + L +V
Sbjct: 490 SELTARHELQVEMKKMESDFEQKLQDLQGEKDALHSEKQQIATEKQDLEAEVSQLTGEVA 549
Query: 66 FIRVHL---CKSTVLRVGAKVVPPPGSPDSVVPPPRSP-----DSVVPPPGSPDSVVLPP 117
+ L K A + PP P PP P +++PPP +P PP
Sbjct: 550 KLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPP 609
Query: 118 RSPDSVVPPPGSPDSVVL---------------PPRSPDSVVPPARSPDSGGRAGSPRSL 162
P PPP P V + PP S D+ +PP G SP SL
Sbjct: 610 PPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSL 669
Query: 163 APPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
P P G AR PP P P S P
Sbjct: 670 --PGGTAIPPPPPLPGS------ARIPPPPPPLPGSAGIP 701
Score = 52.4 bits (124), Expect = 3e-07
Identities = 39/117 (33%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVL--PPRSPDSVV---PPPGSPDSVVLPP 137
++PPP +P PP P PPP P V + PP P PPP S D+ + PP
Sbjct: 595 IIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPP 654
Query: 138 RS-PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVP 193
P+ V P+ S GG A P P +A P G G P PP +P
Sbjct: 655 PPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP---PPPPLP 708
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 30/141 (21%)
Query: 80 GAKVVPP----PGSPDSVVPPPRSPDSV---VPPPGSPDSVVLPPRSP-----DSVVPPP 127
G +PP PGS PPP P S PPP P +PP P + PPP
Sbjct: 671 GGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPP 730
Query: 128 GSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLAR 187
P +PP P +PP PP AP +G P
Sbjct: 731 PFPGGPGIPPPPPGMGMPP----------------PPPFGFGVPAAP--VLPFGLTPKKL 772
Query: 188 SPPQVPSRPPSLSQPLSSRVS 208
P+V R P+ S+ ++ +S
Sbjct: 773 YKPEVQLRRPNWSKLVAEDLS 793
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 53.1 bits (126), Expect = 2e-07
Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGS--PDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSV 143
PP SP S PP ++P S+ PP P PP SP S PPP +P + PP
Sbjct: 458 PPVSP-SATPPSQAPPSLAAPPLQVPPSPPASPPMSP-SATPPPQAPPPLAAPPL--QLA 513
Query: 144 VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 203
PP ++P + +PPA+ + + PLA PPQ PP L+ PL
Sbjct: 514 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA---PPVLAAPL 570
Score = 48.9 bits (115), Expect = 3e-06
Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 74 STVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPP--GSPDSVVLPPRSPDSVVPPPGSPD 131
S L+ +P P PPP++P ++ PP P PP SP P P +P+
Sbjct: 371 SPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP-LATPSPQAPN 429
Query: 132 SVVL--------PPRSPD---SVVPPARSPDSGGRAGSPRSLAPP--AAARAEGAPGWAG 178
++ + PP SP PPA P S + +P S APP AA + P
Sbjct: 430 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPPSPPA 487
Query: 179 RWGRVPLARSPPQVPSRPPSLSQPL 203
P A PPQ P PP + PL
Sbjct: 488 SPPMSPSATPPPQAP--PPLAAPPL 510
Score = 46.6 bits (109), Expect = 2e-05
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 37/163 (22%)
Query: 85 PPPGSPDSV-VPPPRSPDS----------VVPPPGSPDSVVL--------PPRSPDSVVP 125
PPP +P ++ +PP ++P S P P +P+++ + PP SP P
Sbjct: 392 PPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAP 451
Query: 126 --PPGSP---DSVVLPPRSPDSV-VPPARSPDS--GGRAGSPRSLAPPAAARAEGAPGWA 177
PP SP S P ++P S+ PP + P S SP + PP A AP
Sbjct: 452 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP--- 508
Query: 178 GRWGRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW 220
+ LA+ PPQ PP+L+ P + FP P+
Sbjct: 509 ----PLQLAKPPPQA---PPALATPPLQALPSPPASFPGQAPF 544
Score = 45.4 bits (106), Expect = 4e-05
Identities = 48/162 (29%), Positives = 60/162 (37%), Gaps = 29/162 (17%)
Query: 79 VGAKVVPPPGSPDSVVPPPRS--PDSVVPPPGSPDSVVLPPRSPDSVV--------PPPG 128
V PP +P S+ PP P PP SP S PP++P + PPP
Sbjct: 460 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP-SATPPPQAPPPLAAPPLQLAKPPPQ 518
Query: 129 SPDSVVLP-----PRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRV 183
+P ++ P P P S A S SP + PP A AP +
Sbjct: 519 APPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP-------LL 571
Query: 184 PLARSPP-----QVPSRPPSLSQPLS-SRVSLYELLFPSWPP 219
+ SPP Q P RPP+ S S L L P PP
Sbjct: 572 QVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 613
Score = 40.4 bits (93), Expect = 0.001
Identities = 51/156 (32%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDS-----------------VVLPPRSPDSVVPPP 127
P P +P S PP S ++ PP +P S + PP SP PPP
Sbjct: 337 PLPLAPPSPSAPP-SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSP-LATPPP 394
Query: 128 GSPDSVVLPP-RSPDSVVPPARSPDSGGRAGSPRSLAPPA-AARAEGAPGWAGRWGRVPL 185
+P ++ LPP ++P S PPA P S SP+ AP A A AP V
Sbjct: 395 QAPPALALPPLQAPPS--PPASPPLSPLATPSPQ--APNALAVHLLQAPFSPPPSPPVQA 450
Query: 186 ARSPPQVPSRPPSLSQPLSSRVSLY--ELLFPSWPP 219
SPP P PS + P + SL L P PP
Sbjct: 451 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 486
Score = 38.5 bits (88), Expect = 0.005
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PP PD+ V PR ++ P P P P RSP S + P +P+ +
Sbjct: 589 PPTPGPDTSVSGPRLTLALAPGPPPP-----PSRSPSSTLSGPDLAGHSSSATSTPEEL- 642
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA-RSPPQVPSRPPSLSQPL 203
R DSG G+ S PP A A P R PLA R P P P + P
Sbjct: 643 ---RGYDSGPEGGAAAS-PPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG 698
Query: 204 SS 205
S+
Sbjct: 699 SA 700
Score = 28.9 bits (63), Expect = 3.6
Identities = 32/115 (27%), Positives = 42/115 (36%), Gaps = 17/115 (14%)
Query: 80 GAKVVPPPGSPDSVVPPPRSPDSVVPP------PGSPDSVVLPPRSPDSVVPPPGSPDSV 133
GA PPP + + P PP PG+P + PP + PGS D +
Sbjct: 652 GAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP--LPWPPAT------GPGSADGL 703
Query: 134 --VLPPRSPDSVVPPARSPDSGGRAG-SPRSLAPPAAARAEGAPGWAGRWGRVPL 185
+ P+S P + D G G S A A A A R G +PL
Sbjct: 704 CTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPL 758
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 53.1 bits (126), Expect = 2e-07
Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGS--PDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSV 143
PP SP S PP ++P S+ PP P PP SP S PPP +P + PP
Sbjct: 419 PPVSP-SATPPSQAPPSLAAPPLQVPPSPPASPPMSP-SATPPPQAPPPLAAPPL--QLA 474
Query: 144 VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPL 203
PP ++P + +PPA+ + + PLA PPQ PP L+ PL
Sbjct: 475 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA---PPVLAAPL 531
Score = 48.9 bits (115), Expect = 3e-06
Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 74 STVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPP--GSPDSVVLPPRSPDSVVPPPGSPD 131
S L+ +P P PPP++P ++ PP P PP SP P P +P+
Sbjct: 332 SPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP-LATPSPQAPN 390
Query: 132 SVVL--------PPRSPD---SVVPPARSPDSGGRAGSPRSLAPP--AAARAEGAPGWAG 178
++ + PP SP PPA P S + +P S APP AA + P
Sbjct: 391 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPPSPPA 448
Query: 179 RWGRVPLARSPPQVPSRPPSLSQPL 203
P A PPQ P PP + PL
Sbjct: 449 SPPMSPSATPPPQAP--PPLAAPPL 471
Score = 46.6 bits (109), Expect = 2e-05
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 37/163 (22%)
Query: 85 PPPGSPDSV-VPPPRSPDS----------VVPPPGSPDSVVL--------PPRSPDSVVP 125
PPP +P ++ +PP ++P S P P +P+++ + PP SP P
Sbjct: 353 PPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAP 412
Query: 126 --PPGSP---DSVVLPPRSPDSV-VPPARSPDS--GGRAGSPRSLAPPAAARAEGAPGWA 177
PP SP S P ++P S+ PP + P S SP + PP A AP
Sbjct: 413 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP--- 469
Query: 178 GRWGRVPLARSPPQVPSRPPSLSQPLSSRVSLYELLFPSWPPW 220
+ LA+ PPQ PP+L+ P + FP P+
Sbjct: 470 ----PLQLAKPPPQA---PPALATPPLQALPSPPASFPGQAPF 505
Score = 45.4 bits (106), Expect = 4e-05
Identities = 48/162 (29%), Positives = 60/162 (37%), Gaps = 29/162 (17%)
Query: 79 VGAKVVPPPGSPDSVVPPPRS--PDSVVPPPGSPDSVVLPPRSPDSVV--------PPPG 128
V PP +P S+ PP P PP SP S PP++P + PPP
Sbjct: 421 VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP-SATPPPQAPPPLAAPPLQLAKPPPQ 479
Query: 129 SPDSVVLP-----PRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRV 183
+P ++ P P P S A S SP + PP A AP +
Sbjct: 480 APPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP-------LL 532
Query: 184 PLARSPP-----QVPSRPPSLSQPLS-SRVSLYELLFPSWPP 219
+ SPP Q P RPP+ S S L L P PP
Sbjct: 533 QVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Score = 42.7 bits (99), Expect = 2e-04
Identities = 51/156 (32%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDS-----------------VVLPPRSPDSVVPPP 127
P P +P S PP S ++ PP +P S + PP SP PPP
Sbjct: 298 PSPSAPPSPSAPP-SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSP-LATPPP 355
Query: 128 GSPDSVVLPP-RSPDSVVPPARSPDSGGRAGSPRSLAPPA-AARAEGAPGWAGRWGRVPL 185
+P ++ LPP ++P S PPA P S SP+ AP A A AP V
Sbjct: 356 QAPPALALPPLQAPPS--PPASPPLSPLATPSPQ--APNALAVHLLQAPFSPPPSPPVQA 411
Query: 186 ARSPPQVPSRPPSLSQPLSSRVSLY--ELLFPSWPP 219
SPP P PS + P + SL L P PP
Sbjct: 412 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 447
Score = 38.5 bits (88), Expect = 0.005
Identities = 38/122 (31%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PP PD+ V PR ++ P P P P RSP S + P +P+ +
Sbjct: 550 PPTPGPDTSVSGPRLTLALAPGPPPP-----PSRSPSSTLSGPDLAGHSSSATSTPEEL- 603
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA-RSPPQVPSRPPSLSQPL 203
R DSG G+ S PP A A P R PLA R P P P + P
Sbjct: 604 ---RGYDSGPEGGAAAS-PPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG 659
Query: 204 SS 205
S+
Sbjct: 660 SA 661
Score = 37.7 bits (86), Expect = 0.008
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 95 PPPRSPDSVVP-PPGSPDSVVLPPRSPDS--VVPPPGSPDSVVLPPRSPDSVVPPARSPD 151
P R+P + P PPGSP PP +P + V+ G+ L R+ + A P+
Sbjct: 17 PAARAPGLLTPRPPGSPRPP--PPVTPAALRVLGAAGAVGRKPLAERAGG--IGGATIPE 72
Query: 152 SGGRAGSPRSLAPPAAARAEGAP 174
S RAG R+ PPA+ R E AP
Sbjct: 73 SAPRAGPTRTSRPPASGRGERAP 95
Score = 36.2 bits (82), Expect = 0.023
Identities = 30/110 (27%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 100 PDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRA-GS 158
P V PP + P S P P +P S PP PPA P + GS
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGS 332
Query: 159 PR-----------SLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
P L+P A + P A +P ++PP P+ PP
Sbjct: 333 PTLQATHSFLPSPPLSPLATPPPQAPPALA-----LPPLQAPPSPPASPP 377
Score = 33.1 bits (74), Expect = 0.19
Identities = 36/129 (27%), Positives = 44/129 (34%), Gaps = 15/129 (11%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP-----PGSPDSVVLPPRSP 140
P SP P R P P L P V PP P P +P
Sbjct: 239 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 298
Query: 141 DSVVPPARS-PDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRV------PLARSPPQVP 193
PP+ S P S SP + P A + G+P + PLA PPQ
Sbjct: 299 SPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQA- 357
Query: 194 SRPPSLSQP 202
PP+L+ P
Sbjct: 358 --PPALALP 364
Score = 28.9 bits (63), Expect = 3.6
Identities = 32/115 (27%), Positives = 42/115 (36%), Gaps = 17/115 (14%)
Query: 80 GAKVVPPPGSPDSVVPPPRSPDSVVPP------PGSPDSVVLPPRSPDSVVPPPGSPDSV 133
GA PPP + + P PP PG+P + PP + PGS D +
Sbjct: 613 GAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP--LPWPPAT------GPGSADGL 664
Query: 134 --VLPPRSPDSVVPPARSPDSGGRAG-SPRSLAPPAAARAEGAPGWAGRWGRVPL 185
+ P+S P + D G G S A A A A R G +PL
Sbjct: 665 CTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPL 719
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 53.1 bits (126), Expect = 2e-07
Identities = 44/162 (27%), Positives = 58/162 (35%), Gaps = 30/162 (18%)
Query: 60 LFSKVVFIRVHLCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRS 119
L + +RV S R A+V PP PP P G+P +
Sbjct: 76 LIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRA-------PRGAPAAAAAAAPP 128
Query: 120 PDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRA-------------------GSPR 160
P PPP +P + P R+P + A +P S G A +P
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPP 188
Query: 161 SLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
++APPA R P A R +P PP P PP QP
Sbjct: 189 AVAPPAGPRRAPPPAVAAREPPLP----PPPQPPAPPQQQQP 226
Score = 48.9 bits (115), Expect = 3e-06
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 94 VPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSG 153
V PPR + PP +P P + + PPP PP +P + PAR+P
Sbjct: 99 VQPPRRGATPPAPPRAPRGA---PAAAAAAAPPPTPAPP---PPPAPVAAAAPARAP--- 149
Query: 154 GRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQPLSSR 206
RA + + APP+ A+ P R R +PP P+ PP+++ P R
Sbjct: 150 -RAAAAAATAPPSPGPAQPGP----RAQRAAPLAAPPPAPAAPPAVAPPAGPR 197
Score = 35.0 bits (79), Expect = 0.050
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 22/108 (20%)
Query: 85 PPPGSPDSVVPP--PRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
P P +P +V PP PR PPP + R P +PPP P + PP+
Sbjct: 182 PAPAAPPAVAPPAGPRR----APPP------AVAAREPP--LPPPPQPPA---PPQQQQP 226
Query: 143 VVPPARSPDSGG---RAGSPRSLAPPAAARAEGAPGWAGRWGRVPLAR 187
P + P GG G+ R ++ R G G AG GR+ R
Sbjct: 227 PPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAG--GRLTRGR 272
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 52.4 bits (124), Expect = 3e-07
Identities = 44/133 (33%), Positives = 54/133 (40%), Gaps = 9/133 (6%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGS--PDSVVLPPRSPDSVVPP-PGSPDSVVLPPRSPDS 142
PP S +PPP P +PPP S P PP P+S PP PG P PP P
Sbjct: 672 PPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGP-----PPAPPPP 726
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLA-RSPPQVPSRPPSLSQ 201
+ P P GS S P A P W R+ ++ RS P+ SL +
Sbjct: 727 GLAPPPPPGLFFGLGSSSSQCPRKPAIEPSCPMKPLYWTRIQISDRSQNATPTLWDSLEE 786
Query: 202 PLSSRVSLYELLF 214
P S +E LF
Sbjct: 787 PDIRDPSEFEYLF 799
Score = 48.5 bits (114), Expect = 4e-06
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 12/118 (10%)
Query: 82 KVVPPPGSPDSVVPPPRSPD---SVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPR 138
K +PPP P S+ PPP P S+ P P P PP P PPP P S PP
Sbjct: 643 KALPPP--PASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPP 700
Query: 139 SPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRP 196
P PP + + G P PP PG L S Q P +P
Sbjct: 701 PPPP--PPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLF-----FGLGSSSSQCPRKP 751
>gi|15529996 son of sevenless homolog 1 [Homo sapiens]
Length = 1333
Score = 52.4 bits (124), Expect = 3e-07
Identities = 49/155 (31%), Positives = 61/155 (39%), Gaps = 28/155 (18%)
Query: 84 VPPPGSPDSVVPPPRSPDSVVPPPGSPDSVV---------LPPRSPDSVVPPP----GSP 130
VPPP VPP R P+S P SP ++ +PPR P S P
Sbjct: 1149 VPPP------VPPRRRPESA-PAESSPSKIMSKHLDSPPAIPPRQPTSKAYSPRYSISDR 1201
Query: 131 DSVVLPPRSPDSVVP--PARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARS 188
S+ PP SP + P P R+PD + SP L PP + P
Sbjct: 1202 TSISDPPESPPLLPPREPVRTPDVF--SSSPLHLQPPPLGKKSDHGNAFFPNSPSPFTPP 1259
Query: 189 PPQVPS----RPPSLSQPLSSRVSLYELLFPSWPP 219
PPQ PS R S PL+ V L+ + P PP
Sbjct: 1260 PPQTPSPHGTRRHLPSPPLTQEVDLHSIAGPPVPP 1294
Score = 28.1 bits (61), Expect = 6.1
Identities = 41/156 (26%), Positives = 56/156 (35%), Gaps = 49/156 (31%)
Query: 86 PPGSPDSVVPPPRSPDS-VVPPPGSPDS---------------------------VVLP- 116
P +S P SP + + PPP S S V LP
Sbjct: 1069 PESETESTASAPNSPRTPLTPPPASGASSTTDVCSVFDSDHSSPFHSSNDTVFIQVTLPH 1128
Query: 117 -PRSPD-SVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSL------APPA-A 167
PRS S + D V +PP VPP R P+S SP + +PPA
Sbjct: 1129 GPRSASVSSISLTKGTDEVPVPPP-----VPPRRRPESAPAESSPSKIMSKHLDSPPAIP 1183
Query: 168 ARAEGAPGWAGRWG---RVPLA---RSPPQVPSRPP 197
R + ++ R+ R ++ SPP +P R P
Sbjct: 1184 PRQPTSKAYSPRYSISDRTSISDPPESPPLLPPREP 1219
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 52.4 bits (124), Expect = 3e-07
Identities = 37/115 (32%), Positives = 43/115 (37%), Gaps = 16/115 (13%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVP--PPGSPDSVVLPPRSPDS 142
PPPG P P + PPPG P PP+ S P PPG P PP
Sbjct: 52 PPPGKPQGPPPQGGNKPQGPPPPGKPQGP--PPQGDKSRSPRSPPGKPQG---PP----- 101
Query: 143 VVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPP 197
P P G + PP + +G P G + ARSPP P PP
Sbjct: 102 --PQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGG--SKSQSARSPPGKPQGPP 152
Score = 48.9 bits (115), Expect = 3e-06
Identities = 42/126 (33%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 85 PPPGSPDSVVPPPRSPDSVVP--PPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
PPPG P PPP+ S P PPG P PP+ PPP + PP
Sbjct: 72 PPPGKPQG--PPPQGDKSRSPRSPPGKPQGP--PPQGGKPQGPPPQGGNKPQGPPPPGKP 127
Query: 143 VVPPARSPDSGGRAGSP--RSLAPP--AAARAEGAPGWAGRWGRVPLA--RSPPQVPSRP 196
PPA+ A SP + PP +G P AG + P A PQ P RP
Sbjct: 128 QGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP 187
Query: 197 PSLSQP 202
P +P
Sbjct: 188 PQGGRP 193
Score = 38.1 bits (87), Expect = 0.006
Identities = 32/118 (27%), Positives = 41/118 (34%), Gaps = 26/118 (22%)
Query: 88 GSPDSVVPPP-RSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPP 146
G+P P P PPPG P PPP + P+ P P
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPPGKPQG------------PPPQGGNK----PQGPPPPGKP 77
Query: 147 ARSPDSGGRAGSPRSL------APPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPS 198
P G ++ SPRS PP + +G P + G P PP P PP+
Sbjct: 78 QGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPP---PQGGNKPQGPPPPGKPQGPPA 132
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 52.0 bits (123), Expect = 4e-07
Identities = 41/122 (33%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 80 GAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRS 139
GA P P P PP + P PPP P PP P PP P + LPP +
Sbjct: 15 GATPAPGPPPPPPPAPPQQQP----PPPPPP----APPPGP-GPAPPQHPPRAEALPPEA 65
Query: 140 PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAP-GWAGRWGRVPLARSPPQVPSRPPS 198
D P R G P + P AA+ A+G+P G GR G + + P+ P+R P
Sbjct: 66 ADEGGPRGRLRSRDSSCGRPGT--PGAASTAKGSPNGECGR-GEPQCSPAGPEGPARGPK 122
Query: 199 LS 200
+S
Sbjct: 123 VS 124
Score = 45.4 bits (106), Expect = 4e-05
Identities = 37/116 (31%), Positives = 44/116 (37%), Gaps = 8/116 (6%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVV 144
PPPG P P + PPP SP PR+P P G P + + P P +
Sbjct: 761 PPPG------PAPAAASPGPPPPASPPGAPASPRAP-RTSPYGGLPAAPLAGPALPARRL 813
Query: 145 PPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLS 200
A P S + P AP AA A R G P AR+ P R S S
Sbjct: 814 SRASRPLSASQPSLPHG-APGPAASTRPASSSTPRLGPTPAARAAAPSPDRRDSAS 868
Score = 37.7 bits (86), Expect = 0.008
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 25/155 (16%)
Query: 57 KNALFSKVVFIRVHLCKSTVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLP 116
+NA+ ++V + + L + PPP PPP S + ++
Sbjct: 687 ENAIIQEIVKYDREMVQQAELGQRVGLFPPP-------PPPPQVTSAIATLQQAAAMSFC 739
Query: 117 PRSPDSVVPPP--GSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAP 174
P+ +V P GSP V PP P P A SP G P +PP A + AP
Sbjct: 740 PQVARPLVGPLALGSPRLVRRPPPGP---APAAASP------GPPPPASPPGAPASPRAP 790
Query: 175 GWAGRWGRVPLARSPPQVP-------SRPPSLSQP 202
+ G + P +P SRP S SQP
Sbjct: 791 RTSPYGGLPAAPLAGPALPARRLSRASRPLSASQP 825
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 51.6 bits (122), Expect = 5e-07
Identities = 42/129 (32%), Positives = 46/129 (35%), Gaps = 16/129 (12%)
Query: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSP-- 140
+ PPP PPP+ P PPP P P + PP S VV P
Sbjct: 60 IPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAP 119
Query: 141 --------DSVVPPARSPDSGGRAGS---PRSLAPPAAARA-EGAPGWAGRWGRVPLARS 188
S PPA P SG GS P PPA A GAP VP +
Sbjct: 120 GVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVP--TT 177
Query: 189 PPQVPSRPP 197
PPQ PP
Sbjct: 178 PPQAGGPPP 186
Score = 51.2 bits (121), Expect = 7e-07
Identities = 38/120 (31%), Positives = 41/120 (34%), Gaps = 12/120 (10%)
Query: 88 GSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPA 147
G + PPP PPP P PP P PP P PP P P
Sbjct: 55 GPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQP----PPHPQPHQQQQPPPPPQDSSKPV 110
Query: 148 RSPDSG-----GRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSLSQP 202
+ G G A S APPA GAP +G P PP V S PP P
Sbjct: 111 VAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPG---PTPTPPPAVTSAPPGAPPP 167
Score = 47.8 bits (112), Expect = 7e-06
Identities = 41/129 (31%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGS--PDSVVLPPRSPDSVVPPPGS-PDSVVLPPRSPD 141
PPP DS P P GS P S PP +P + PPGS P PP +
Sbjct: 99 PPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVT 158
Query: 142 SV---VPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRP-- 196
S PP P SG P++ PP A PG + G P ++P P
Sbjct: 159 SAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKP 218
Query: 197 ---PSLSQP 202
P LS P
Sbjct: 219 GGGPGLSTP 227
Score = 31.2 bits (69), Expect = 0.73
Identities = 29/103 (28%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 85 PPPGSPDSVVP--PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
PPP P S VP PP++ PP P P + P P G P P
Sbjct: 165 PPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGL 224
Query: 143 VVP---PARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGR 182
P P GG R PP + P G GR
Sbjct: 225 STPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGR 267
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 51.2 bits (121), Expect = 7e-07
Identities = 38/123 (30%), Positives = 46/123 (37%), Gaps = 18/123 (14%)
Query: 85 PPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVV-----PPPGSPDSVVLPPRS 139
PPP S PPP P + PPP PP P PPP S SV +PP
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPP 338
Query: 140 PDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSRPPSL 199
P+ + PP P + +P PP + G P+A PP P PP
Sbjct: 339 PNRMYPP---PPPALPSSAPSGPPPPPPSVL----------GVGPVAPPPPPPPPPPPGP 385
Query: 200 SQP 202
P
Sbjct: 386 PPP 388
Score = 47.0 bits (110), Expect = 1e-05
Identities = 32/94 (34%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 85 PPPGSPDSVVPPP--RSPDSVVPPPG-SPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPD 141
PPP PPP R+P + PPP S SV +PP P+ + PPP LP +P
Sbjct: 301 PPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPP----ALPSSAPS 356
Query: 142 SVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPG 175
PP S G P PP PG
Sbjct: 357 GPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPG 390
Score = 43.1 bits (100), Expect = 2e-04
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 80 GAKVVPPPGSPDSVVPPP--RSPDSVVPPPG-----SPDSVVLPPRSPDSVVPPPGSPDS 132
GA PP +P + PPP P VPPP P LP +P PPP S
Sbjct: 308 GAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLG 367
Query: 133 V--VLPPRSPDSVVPPARSPDSG 153
V V PP P PP P G
Sbjct: 368 VGPVAPPPPPPPPPPPGPPPPPG 390
Score = 32.3 bits (72), Expect = 0.33
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 85 PPPGSPDSVV----PPPRSPDSVVP--PPGSPDSVVLPPRSPDSVVPPPGSP 130
PPP P S PPP S V P PP P PP P PPPG P
Sbjct: 346 PPPALPSSAPSGPPPPPPSVLGVGPVAPPPPP-----PPPPPPGPPPPPGLP 392
Score = 30.4 bits (67), Expect = 1.2
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 7/36 (19%)
Query: 75 TVLRVGAKVVPPPGSPDSVVPPPRSPDSVVPPPGSP 110
+VL VG PPP PPP P PPPG P
Sbjct: 364 SVLGVGPVAPPPP-------PPPPPPPGPPPPPGLP 392
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 51.2 bits (121), Expect = 7e-07
Identities = 39/102 (38%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 87 PGSPDSVVPPPRSP----DSVVPPPGSPDSVVLPPRSPDSVVPPP----GSPDSVVLPPR 138
P PD +PPP P D +PPP P + PP PD V PPP G S + PP
Sbjct: 547 PAPPDDFLPPPPPPPPLDDPELPPP--PPDFMEPP--PDFVPPPPPSYAGIAGSELPPPP 602
Query: 139 SPDSVVPPARSPDSG--GRAGSPRSLAPPAAARAEGAPGWAG 178
P PA PDS A + R PP G PG AG
Sbjct: 603 PPPPAPAPAPVPDSARPPPAVAKRPPVPPKRQENPGHPGGAG 644
Score = 49.3 bits (116), Expect = 3e-06
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 25/128 (19%)
Query: 87 PGSPDSVVPPPRSPDSVVPPPGSPDSVVLP--------PRSPDSVVPPPGSP---DSVVL 135
P +P S +PPP GSP + + P PD +PPP P D L
Sbjct: 509 PHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPEL 568
Query: 136 PPRSPDSVVP-----PARSPDSGGRAGSPRSLAPPAAARAEGAPGWAGRWGRVP-LARSP 189
PP PD + P P P G AGS PP AP VP AR P
Sbjct: 569 PPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAP--------VPDSARPP 620
Query: 190 PQVPSRPP 197
P V RPP
Sbjct: 621 PAVAKRPP 628
Score = 41.6 bits (96), Expect = 5e-04
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 86 PPGSPDSVVPPPRSPDSVVPPPGSPDSVV---LPPRSPDSVVPPPGS-PDSVVLPPR-SP 140
PP PD + PPP D V PPP S + LPP P P P PDS PP +
Sbjct: 569 PPPPPDFMEPPP---DFVPPPPPSYAGIAGSELPPPPPPPPAPAPAPVPDSARPPPAVAK 625
Query: 141 DSVVPPARSPDSGGRAGS 158
VPP R + G G+
Sbjct: 626 RPPVPPKRQENPGHPGGA 643
Score = 34.7 bits (78), Expect = 0.066
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 80 GAKVVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGS 129
G+++ PPP P + P P PDS PPP +PP+ ++ P G+
Sbjct: 595 GSELPPPPPPPPAPAPAP-VPDSARPPPAVAKRPPVPPKRQENPGHPGGA 643
Score = 33.9 bits (76), Expect = 0.11
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 83 VVPPPGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDSVVLPPRSPDS 142
V PPP S + S +PPP P P PDS PPP +PP+ ++
Sbjct: 583 VPPPPPSYAGIA------GSELPPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPPKRQEN 636
Query: 143 VVPPARSPDSGG 154
P +GG
Sbjct: 637 ---PGHPGGAGG 645
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,264,552
Number of Sequences: 37866
Number of extensions: 938414
Number of successful extensions: 18336
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 1344
Number of HSP's that attempted gapping in prelim test: 6563
Number of HSP's gapped (non-prelim): 6917
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.