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Search of human proteins with 118600975
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118600975 syntaxin binding protein 3 [Homo sapiens]
(592 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118600975 syntaxin binding protein 3 [Homo sapiens] 1195 0.0
gi|73760415 syntaxin binding protein 1 isoform b [Homo sapiens] 599 e-171
gi|4507297 syntaxin binding protein 1 isoform a [Homo sapiens] 586 e-167
gi|188528689 syntaxin binding protein 2 isoform a [Homo sapiens] 529 e-150
gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens] 521 e-148
gi|18105063 vacuolar protein sorting 45A [Homo sapiens] 118 1e-26
gi|33469966 vesicle transport-related protein isoform a [Homo sa... 76 1e-13
gi|33469978 vesicle transport-related protein isoform b [Homo sa... 62 2e-09
gi|18105056 vacuolar protein sorting 33A [Homo sapiens] 52 2e-06
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 35 0.25
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 33 0.96
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 33 0.96
gi|31542785 sec1 family domain containing 2 [Homo sapiens] 33 0.96
gi|122937249 glutamate receptor interacting protein 2 [Homo sapi... 32 1.6
gi|41055953 ubiquitin thioesterase 40 [Homo sapiens] 32 2.1
gi|55770834 centromere protein F [Homo sapiens] 31 2.8
gi|45505178 cancer antigen 1 [Homo sapiens] 31 3.7
gi|154350241 brefeldin A-inhibited guanine nucleotide-exchange p... 30 4.8
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 30 4.8
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 30 4.8
gi|71061468 centromere protein E [Homo sapiens] 30 4.8
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 30 4.8
gi|171846278 leucine-rich repeat kinase 2 [Homo sapiens] 30 6.2
gi|4506467 radixin [Homo sapiens] 30 6.2
gi|215276987 glutathione S-transferase alpha 2 [Homo sapiens] 30 6.2
gi|4758128 doublecortin-like kinase 1 [Homo sapiens] 30 6.2
gi|197209974 coiled-coil and C2 domain containing 2A isoform a [... 30 6.2
gi|90193626 cadherin 9, type 2 preproprotein [Homo sapiens] 30 8.2
gi|157384973 tenascin R [Homo sapiens] 30 8.2
gi|29294627 PTPRF interacting protein binding protein 1 isoform ... 30 8.2
>gi|118600975 syntaxin binding protein 3 [Homo sapiens]
Length = 592
Score = 1195 bits (3092), Expect = 0.0
Identities = 592/592 (100%), Positives = 592/592 (100%)
Query: 1 MAPPVAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKLLASCCKMTDLLEEGIT 60
MAPPVAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKLLASCCKMTDLLEEGIT
Sbjct: 1 MAPPVAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKLLASCCKMTDLLEEGIT 60
Query: 61 VVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFN 120
VVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFN
Sbjct: 61 VVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFN 120
Query: 121 KIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQ 180
KIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQ
Sbjct: 121 KIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQ 180
Query: 181 IVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDR 240
IVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDR
Sbjct: 181 IVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDR 240
Query: 241 GFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVV 300
GFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVV
Sbjct: 241 GFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVV 300
Query: 301 LEEIPKLMKEISSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKL 360
LEEIPKLMKEISSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKL
Sbjct: 301 LEEIPKLMKEISSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKL 360
Query: 361 NIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTE 420
NIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTE
Sbjct: 361 NIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTE 420
Query: 421 ENLDRLIQNVKIENESDMIRNWSYLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTPFIKD 480
ENLDRLIQNVKIENESDMIRNWSYLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTPFIKD
Sbjct: 421 ENLDRLIQNVKIENESDMIRNWSYLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTPFIKD 480
Query: 481 IMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGIT 540
IMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGIT
Sbjct: 481 IMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGIT 540
Query: 541 YSEVRCAYEVSQAHKSCEVIIGSTHVLTPKKLLDDIKMLNKPKDKVSLIKDE 592
YSEVRCAYEVSQAHKSCEVIIGSTHVLTPKKLLDDIKMLNKPKDKVSLIKDE
Sbjct: 541 YSEVRCAYEVSQAHKSCEVIIGSTHVLTPKKLLDDIKMLNKPKDKVSLIKDE 592
>gi|73760415 syntaxin binding protein 1 isoform b [Homo sapiens]
Length = 594
Score = 599 bits (1544), Expect = e-171
Identities = 309/599 (51%), Positives = 442/599 (73%), Gaps = 22/599 (3%)
Query: 5 VAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKLLASCCKMTDLLEEGITVVEN 64
+A GLK+VV +KI V KK+GEWK++++D+ + ++L+SCCKMTD++ EGIT+VE+
Sbjct: 1 MAPIGLKAVVGEKIMHDVIKKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVED 60
Query: 65 IYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFNK-IK 123
I K REP+ ++A+Y ITP+ KSV + DF KY+AA+++FTD CPD LFN+ +K
Sbjct: 61 INKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK 120
Query: 124 ASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQIVT 183
+ +K I+ EINI+F+P+ESQVY+LD D+F YSP A+ K+ I+E +A+QI T
Sbjct: 121 SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPH--KAQMKNPILERLAEQIAT 178
Query: 184 VCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKG--KTHSQLLIIDRG 241
+CATL E P VRY+ + DNA LAQL++ KL D YK D+ ++ +G K SQLLI+DRG
Sbjct: 179 LCATLKEYPAVRYRGEYKDNAL-LAQLIQDKL-DAYKADDPTMGEGPDKARSQLLILDRG 236
Query: 242 FDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDG----KEKEAILEEEDDLWVRIRHRHI 297
FDP S VLHELTFQAM+YDLLPIEND YKY+T G + KE +L+E+DDLW+ +RH+HI
Sbjct: 237 FDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEARVKEVLLDEDDDLWIALRHKHI 296
Query: 298 AVVLEEIPKLMKEISSTKKATEG-KTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMN 356
A V +E+ + +K+ SS+K+ G KT++ L+Q++KKMP ++K+++K HL+LAEDCM
Sbjct: 297 AEVSQEVTRSLKDFSSSKRMNTGEKTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMK 356
Query: 357 KFKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSIN 416
++ ++KLC+ EQDLA+GTDAEG+K+KD MR ++P+LL+ N DKIR ILLYIF N
Sbjct: 357 HYQGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVSTYDKIRIILLYIFLKN 416
Query: 417 GTTEENLDRLIQNVKIENE-SDMIRNWSYLGVPIVPQS---QQGKPLRKDRSAEETFQLS 472
G TEENL++LIQ+ +I E S++I N ++LGVPIV S ++ KP RK+R +E+T+QLS
Sbjct: 417 GITEENLNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKERISEQTYQLS 476
Query: 473 RWTPFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSAR----QKPRANYLEDRKNG 528
RWTP IKDIMED I+++LD+K +PY S + + AVSAR K +A + ++G
Sbjct: 477 RWTPIIKDIMEDTIEDKLDTKHYPYISTRSSASFSTTAVSARYGHWHKNKAP--GEYRSG 534
Query: 529 SKLIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHVLTPKKLLDDIKMLNKPKDKVS 587
+LI+F++GG++ +E+RCAYEV+QA+ EV+IGSTH+LTP+KLLD +K LNK +++S
Sbjct: 535 PRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPQKLLDTLKKLNKTDEEIS 593
>gi|4507297 syntaxin binding protein 1 isoform a [Homo sapiens]
Length = 603
Score = 586 bits (1511), Expect = e-167
Identities = 303/589 (51%), Positives = 433/589 (73%), Gaps = 22/589 (3%)
Query: 5 VAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKLLASCCKMTDLLEEGITVVEN 64
+A GLK+VV +KI V KK+GEWK++++D+ + ++L+SCCKMTD++ EGIT+VE+
Sbjct: 1 MAPIGLKAVVGEKIMHDVIKKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVED 60
Query: 65 IYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFNK-IK 123
I K REP+ ++A+Y ITP+ KSV + DF KY+AA+++FTD CPD LFN+ +K
Sbjct: 61 INKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK 120
Query: 124 ASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQIVT 183
+ +K I+ EINI+F+P+ESQVY+LD D+F YSP A+ K+ I+E +A+QI T
Sbjct: 121 SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPH--KAQMKNPILERLAEQIAT 178
Query: 184 VCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKG--KTHSQLLIIDRG 241
+CATL E P VRY+ + DNA LAQL++ KL D YK D+ ++ +G K SQLLI+DRG
Sbjct: 179 LCATLKEYPAVRYRGEYKDNAL-LAQLIQDKL-DAYKADDPTMGEGPDKARSQLLILDRG 236
Query: 242 FDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDG----KEKEAILEEEDDLWVRIRHRHI 297
FDP S VLHELTFQAM+YDLLPIEND YKY+T G + KE +L+E+DDLW+ +RH+HI
Sbjct: 237 FDPSSPVLHELTFQAMSYDLLPIENDVYKYETSGIGEARVKEVLLDEDDDLWIALRHKHI 296
Query: 298 AVVLEEIPKLMKEISSTKKATEG-KTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMN 356
A V +E+ + +K+ SS+K+ G KT++ L+Q++KKMP ++K+++K HL+LAEDCM
Sbjct: 297 AEVSQEVTRSLKDFSSSKRMNTGEKTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMK 356
Query: 357 KFKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSIN 416
++ ++KLC+ EQDLA+GTDAEG+K+KD MR ++P+LL+ N DKIR ILLYIF N
Sbjct: 357 HYQGTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVSTYDKIRIILLYIFLKN 416
Query: 417 GTTEENLDRLIQNVKIENE-SDMIRNWSYLGVPIVPQS---QQGKPLRKDRSAEETFQLS 472
G TEENL++LIQ+ +I E S++I N ++LGVPIV S ++ KP RK+R +E+T+QLS
Sbjct: 417 GITEENLNKLIQHAQIPPEDSEIITNMAHLGVPIVTDSTLRRRSKPERKERISEQTYQLS 476
Query: 473 RWTPFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSAR----QKPRANYLEDRKNG 528
RWTP IKDIMED I+++LD+K +PY S + + AVSAR K +A + ++G
Sbjct: 477 RWTPIIKDIMEDTIEDKLDTKHYPYISTRSSASFSTTAVSARYGHWHKNKAP--GEYRSG 534
Query: 529 SKLIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHVLTPKKLLDDIK 577
+LI+F++GG++ +E+RCAYEV+QA+ EV+IGSTH+LTP K L D++
Sbjct: 535 PRLIIFILGGVSLNEMRCAYEVTQANGKWEVLIGSTHILTPTKFLMDLR 583
>gi|188528689 syntaxin binding protein 2 isoform a [Homo sapiens]
Length = 593
Score = 529 bits (1362), Expect = e-150
Identities = 277/598 (46%), Positives = 407/598 (68%), Gaps = 20/598 (3%)
Query: 5 VAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKLLASCCKMTDLLEEGITVVEN 64
+A GLK+VV +KI + V KK+GEWK++++D + ++L+SCCKM+D+L EGIT+VE+
Sbjct: 1 MAPSGLKAVVGEKILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVED 60
Query: 65 IYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFNKI-K 123
I K REP+ ++A+Y ++PT KSV + DF YKAA+I+FTD CP+ LF+++ +
Sbjct: 61 INKRREPIPSLEAIYLLSPTEKSVQALIKDFQGTPTFTYKAAHIFFTDTCPEPLFSELGR 120
Query: 124 ASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQIVT 183
+ +K ++ KEI+++F+P+E+QV++LD P + Y Y P A+ + +E +A QI T
Sbjct: 121 SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPF--RAEERTRQLEVLAQQIAT 178
Query: 184 VCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKG--KTHSQLLIIDRG 241
+CATL E P +RY+ P D A +LA V KL + +K D SL +G KT SQLLI+DR
Sbjct: 179 LCATLQEYPAIRYRKGPEDTA-QLAHAVLAKL-NAFKADTPSLGEGPEKTRSQLLIMDRA 236
Query: 242 FDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDG----KEKEAILEEEDDLWVRIRHRHI 297
DPVS +LHELTFQAMAYDLL IE DTY+Y+T G +EK +L+E+DDLWV +RH HI
Sbjct: 237 ADPVSPLLHELTFQAMAYDLLDIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHI 296
Query: 298 AVVLEEIPKLMKEISSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNK 357
A V +++ +L++ +K+ T K ++ L+Q++KKMP ++K++ K HL+LA+DCM
Sbjct: 297 ADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQYQKELNKYSTHLHLADDCMKH 356
Query: 358 FKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSING 417
FK ++EKLC EQDLA+G+DAEG+K+KDSM++++PVLL+ DKIR +LLYI NG
Sbjct: 357 FKGSVEKLCSVEQDLAMGSDAEGEKIKDSMKLIVPVLLDAAVPAYDKIRVLLLYILLRNG 416
Query: 418 TTEENLDRLIQNVKIENESDMIRNWSYLGVPIVPQSQQGKPLRKD--RSAEETFQLSRWT 475
+EENL +LIQ+ ++ S +IRN LG + G R + E T+QLSRWT
Sbjct: 417 VSEENLAKLIQHANVQAHSSLIRNLEQLGGTVTNPGGSGTSSRLEPRERMEPTYQLSRWT 476
Query: 476 PFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSAR----QKPRANYLEDRKNGSKL 531
P IKD+MEDA+++RLD WP+ S + AVSAR K +A + + G +L
Sbjct: 477 PVIKDVMEDAVEDRLDRNLWPFVSDPAPTASSQAAVSARFGHWHKNKAGI--EARAGPRL 534
Query: 532 IVFVIGGITYSEVRCAYEVSQAHK-SCEVIIGSTHVLTPKKLLDDIKMLNKPKDKVSL 588
IV+V+GG+ SE+R AYEV++A + EV+IGS+H+LTP + LDD+K L+K + ++L
Sbjct: 535 IVYVMGGVAMSEMRAAYEVTRATEGKWEVLIGSSHILTPTRFLDDLKALDKKLEDIAL 592
>gi|188528901 syntaxin binding protein 2 isoform b [Homo sapiens]
Length = 590
Score = 521 bits (1342), Expect = e-148
Identities = 275/598 (45%), Positives = 407/598 (68%), Gaps = 23/598 (3%)
Query: 5 VAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKLLASCCKMTDLLEEGITVVEN 64
+A GLK+VV +KI + V KK+GEWK++++D + ++L+SCCKM+D+L EGIT+VE+
Sbjct: 1 MAPSGLKAVVGEKILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVED 60
Query: 65 IYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDNLFNKI-K 123
I K REP+ ++A+Y ++PT K++ + DF YKAA+I+FTD CP+ LF+++ +
Sbjct: 61 INKRREPIPSLEAIYLLSPTEKAL---IKDFQGTPTFTYKAAHIFFTDTCPEPLFSELGR 117
Query: 124 ASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQIVT 183
+ +K ++ KEI+++F+P+E+QV++LD P + Y Y P A+ + +E +A QI T
Sbjct: 118 SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPF--RAEERTRQLEVLAQQIAT 175
Query: 184 VCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKG--KTHSQLLIIDRG 241
+CATL E P +RY+ P D A +LA V KL + +K D SL +G KT SQLLI+DR
Sbjct: 176 LCATLQEYPAIRYRKGPEDTA-QLAHAVLAKL-NAFKADTPSLGEGPEKTRSQLLIMDRA 233
Query: 242 FDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDG----KEKEAILEEEDDLWVRIRHRHI 297
DPVS +LHELTFQAMAYDLL IE DTY+Y+T G +EK +L+E+DDLWV +RH HI
Sbjct: 234 ADPVSPLLHELTFQAMAYDLLDIEQDTYRYETTGLSEAREKAVLLDEDDDLWVELRHMHI 293
Query: 298 AVVLEEIPKLMKEISSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNK 357
A V +++ +L++ +K+ T K ++ L+Q++KKMP ++K++ K HL+LA+DCM
Sbjct: 294 ADVSKKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQYQKELNKYSTHLHLADDCMKH 353
Query: 358 FKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSING 417
FK ++EKLC EQDLA+G+DAEG+K+KDSM++++PVLL+ DKIR +LLYI NG
Sbjct: 354 FKGSVEKLCSVEQDLAMGSDAEGEKIKDSMKLIVPVLLDAAVPAYDKIRVLLLYILLRNG 413
Query: 418 TTEENLDRLIQNVKIENESDMIRNWSYLGVPIVPQSQQGKPLRKD--RSAEETFQLSRWT 475
+EENL +LIQ+ ++ S +IRN LG + G R + E T+QLSRWT
Sbjct: 414 VSEENLAKLIQHANVQAHSSLIRNLEQLGGTVTNPGGSGTSSRLEPRERMEPTYQLSRWT 473
Query: 476 PFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGSGAVSAR----QKPRANYLEDRKNGSKL 531
P IKD+MEDA+++RLD WP+ S + AVSAR K +A + + G +L
Sbjct: 474 PVIKDVMEDAVEDRLDRNLWPFVSDPAPTASSQAAVSARFGHWHKNKAGI--EARAGPRL 531
Query: 532 IVFVIGGITYSEVRCAYEVSQAHK-SCEVIIGSTHVLTPKKLLDDIKMLNKPKDKVSL 588
IV+V+GG+ SE+R AYEV++A + EV+IGS+H+LTP + LDD+K L+K + ++L
Sbjct: 532 IVYVMGGVAMSEMRAAYEVTRATEGKWEVLIGSSHILTPTRFLDDLKALDKKLEDIAL 589
>gi|18105063 vacuolar protein sorting 45A [Homo sapiens]
Length = 570
Score = 118 bits (296), Expect = 1e-26
Identities = 118/568 (20%), Positives = 253/568 (44%), Gaps = 67/568 (11%)
Query: 33 KIMLLDEFTTKLLASCCKMTDLLEEGITVVENI-YKNREPVRQMKALYFITPTSKSVDCF 91
K++L+D+ TT +++ +++L++ + + E I +NRE ++ +KA+ F+ PT ++VD
Sbjct: 23 KVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNREIMKHLKAICFLRPTKENVDYI 82
Query: 92 LHDFASKSENKYKAAYIYFTD-FCPDNLFNKIKASCSKSIRRCKEINISFIPHESQVYTL 150
+ + KY +IYF++ ++ + +A + + +E +I +++L
Sbjct: 83 IQELRRP---KYTIYFIYFSNVISKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSL 139
Query: 151 DVPDAFYYCYSPDPGNAKGKD---AIMETMADQIVTVCATLDENPGVRYKSKPLDNASKL 207
++ G +G++ A + + + +L + P +RY+ + A +L
Sbjct: 140 NIL-----------GCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLSS-EAAKRL 187
Query: 208 AQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIEN- 266
A+ V++ + Y++ E + + LLI+DR D ++ +L++ T+QAM ++LL I N
Sbjct: 188 AECVKQVITKEYELFE--FRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELLGINNN 245
Query: 267 --DTYKYKTDGKE-KEAILE-EEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKT 322
D + K+ +E +L E D+ + + + A + I LM++ K + K
Sbjct: 246 RIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKKPKEQQKL 305
Query: 323 -SLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKF-KLNIEKLCKTEQDLALGTDAEG 380
S++ + ++ P F+K H+ + + + N+ ++ + EQ+LA D
Sbjct: 306 ESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQNDHSS 365
Query: 381 QKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQNVKIENESDMIR 440
+++ + +L N D R ++LY + +L L+ +++ + S+ R
Sbjct: 366 -----ALQNIKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLMMDLRNKGVSEKYR 420
Query: 441 NWSYLGVPIVPQSQQGKPLRKDRSAEETFQ------------LSRWTPFIKDIMEDAIDN 488
V + +G L + A + ++ PF+ + ++ I
Sbjct: 421 KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKG 480
Query: 489 RLDSKEWPYCSQCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRCAY 548
RL +PY G + R +P+ +IVFVIGG TY E Y
Sbjct: 481 RLKENLYPYL----------GPSTLRDRPQ-----------DIIVFVIGGATYEEALTVY 519
Query: 549 EVSQAHKSCEVIIGSTHVLTPKKLLDDI 576
+++ +++G T V K L+++
Sbjct: 520 NLNRTTPGVRIVLGGTTVHNTKSFLEEV 547
>gi|33469966 vesicle transport-related protein isoform a [Homo
sapiens]
Length = 642
Score = 75.9 bits (185), Expect = 1e-13
Identities = 88/425 (20%), Positives = 171/425 (40%), Gaps = 68/425 (16%)
Query: 29 EGEWKIMLLDEFTTKLLASCCKMTDLLEEGITVVENIYKNREPVRQMKALYFITPTSKSV 88
E WK+++ D F +++ + +L + GIT+ ++ +R+P+ + A+YF+ PT +++
Sbjct: 40 EPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENI 99
Query: 89 DCFLHDFASKSENKYKAAYIYFTDFCPDNLFNKI-----KASCSKSIRRCKEINISFIPH 143
D D ++ Y++ Y+ F + I AS + + + ++FI
Sbjct: 100 DRMCQDLRNQ---LYESYYLNFISAISRSKLEDIANAALAASAVTQVAKVFDQYLNFITL 156
Query: 144 ESQVYTLDVPDAFYYCY----SPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSK 199
E ++ L + Y PD + + + +M+T+ D + TL P +R
Sbjct: 157 EDDMFVLCNQNKELVSYRAINRPDITDTE-METVMDTIVDSLFCFFVTLGAVPIIRCSRG 215
Query: 200 PLDNASKLAQLVEKKLEDYYKIDEKSLIKGKT---------HSQLLIIDRGFDPVSTVLH 250
A +A ++KKL + + SL G T L+++DR D + + H
Sbjct: 216 TA--AEMVAVKLDKKLRENLRDARNSLFTGDTLGAGQFSFQRPLLVLVDRNIDLATPLHH 273
Query: 251 ELTFQAMAYDLLP-------------IENDTYKYKTDGKEKEAI-LEEEDDLWVRIRHRH 296
T+QA+ +D+L +EN + K K++ L D W + +
Sbjct: 274 TWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSP 333
Query: 297 IAVVLEEIP-------------KLMKEISSTKKATEGKTSL-----SALTQLMKKMPHFR 338
V E + K +K I + EG S+ + LT + +P
Sbjct: 334 FPEVAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELL 393
Query: 339 KQITKQVVHLNLAEDCMNK---------FKLNIEKLCKTEQD---LALGTDAEGQKVKDS 386
++ +H N+A + F+ + + KT D L + +D + +D
Sbjct: 394 EKKRLIDLHTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDPDAGTPEDK 453
Query: 387 MRVLL 391
MR+ L
Sbjct: 454 MRLFL 458
>gi|33469978 vesicle transport-related protein isoform b [Homo
sapiens]
Length = 575
Score = 61.6 bits (148), Expect = 2e-09
Identities = 82/396 (20%), Positives = 156/396 (39%), Gaps = 68/396 (17%)
Query: 58 GITVVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENKYKAAYIYFTDFCPDN 117
GIT+ ++ +R+P+ + A+YF+ PT +++D D ++ Y++ Y+ F +
Sbjct: 2 GITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRMCQDLRNQ---LYESYYLNFISAISRS 58
Query: 118 LFNKI-----KASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCY----SPDPGNAK 168
I AS + + + ++FI E ++ L + Y PD + +
Sbjct: 59 KLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTE 118
Query: 169 GKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIK 228
+ +M+T+ D + TL P +R A +A ++KKL + + SL
Sbjct: 119 -METVMDTIVDSLFCFFVTLGAVPIIRCSRGTA--AEMVAVKLDKKLRENLRDARNSLFT 175
Query: 229 GKT---------HSQLLIIDRGFDPVSTVLHELTFQAMAYDLLP-------------IEN 266
G T L+++DR D + + H T+QA+ +D+L +EN
Sbjct: 176 GDTLGAGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESSGVEN 235
Query: 267 DTYKYKTDGKEKEAI-LEEEDDLWVRIRHRHIAVVLEEIP-------------KLMKEIS 312
+ K K++ L D W + + V E + K +K I
Sbjct: 236 SPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIM 295
Query: 313 STKKATEGKTSL-----SALTQLMKKMPHFRKQITKQVVHLNLAEDCMNK---------F 358
+ EG S+ + LT + +P ++ +H N+A + F
Sbjct: 296 GLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYF 355
Query: 359 KLNIEKLCKTEQD---LALGTDAEGQKVKDSMRVLL 391
+ + + KT D L + +D + +D MR+ L
Sbjct: 356 EYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFL 391
>gi|18105056 vacuolar protein sorting 33A [Homo sapiens]
Length = 596
Score = 52.0 bits (123), Expect = 2e-06
Identities = 104/598 (17%), Positives = 225/598 (37%), Gaps = 82/598 (13%)
Query: 33 KIMLLDEFTTKLLASCCKMTDLLEEGITVVENIYKNREPVRQMK-ALYFITPTSKSVDCF 91
K ++ DE+ T + + L E + + + NR P +K ++F+ P + +D
Sbjct: 34 KAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGNRLPAADVKNIIFFVRPRLELMDII 93
Query: 92 LHDFASKSEN-KYKAAYIYFTD----FCPDNLFNKIKASCSKSIRRCKEINISFIPHESQ 146
+ S+ + +I F C L K I R +E ++ IP +
Sbjct: 94 AENVLSEDRRGPTRDFHILFVPRRSLLCEQRL--KDLGVLGSFIHR-EEYSLDLIPFDGD 150
Query: 147 VYTLDVPDAFYYCYSPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASK 206
+ +++ AF CY +G + A ++T+ A P + K + +
Sbjct: 151 LLSMESEGAFKECY------LEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVAN 204
Query: 207 LAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAM--------- 257
+ ++ K E + + S+ LL++DR D ++ + +LT++ +
Sbjct: 205 M--MIRMKRE--FTGSQNSIFP--VFDNLLLLDRNVDLLTPLATQLTYEGLIDEIYGIQN 258
Query: 258 AYDLLPIENDTYKYKTDG------KEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEI 311
+Y LP E K + DG + K+ L ++L+ IR ++ V + K K I
Sbjct: 259 SYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAEELYAEIRDKNFNAVGSVLSKKAKII 318
Query: 312 SSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAE--DCMNKFKLNIEKLCKTE 369
S+ + ++ + Q + ++PH + H ++AE + + +KL E
Sbjct: 319 SAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAELIKDVTTSEDFFDKL-TVE 377
Query: 370 QDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQN 429
Q+ G D D + + + + H +R + L +G ++ LD
Sbjct: 378 QEFMSGIDT------DKVNNYIEDCIAQKHSLIKVLRLVCLQSVCNSGLKQKVLDYY--- 428
Query: 430 VKIENESDMIRNWSYLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTPFIKDIMEDAIDNR 489
+ ++++ + Y + + ++ L+ + R T ++ M+D +
Sbjct: 429 -----KREILQTYGYEHILTLHNLEKAGLLKPQTGGRNNYPTIRKT--LRLWMDDVNEQN 481
Query: 490 LDSKEWPYCSQCPAV-----------WNG--------SGAVSARQKPRANYLEDRKNGSK 530
+ Y P W G ++P L+ ++ +
Sbjct: 482 PTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQPGE 541
Query: 531 ---LIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHVLTPKKLLDDIKMLNKPKDK 585
++F +GG+T++E+ +SQ G+ +V+ KL++ + +K
Sbjct: 542 NRVTLIFFLGGVTFAEIAALRFLSQLEDG-----GTEYVIATTKLMNGTSWIEALMEK 594
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 34.7 bits (78), Expect = 0.25
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 35/246 (14%)
Query: 201 LDNASKLAQLVEK---KLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAM 257
LD+A A EK ++D + + L LL+ +R + +S H
Sbjct: 1150 LDDAHNKADNKEKTVINIQDQFHAIVQKLQAESEKQSLLLEERNKELISECNH------- 1202
Query: 258 AYDLLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKA 317
++ Y+Y+ + E+E + VR + +A L++ + M E +S +
Sbjct: 1203 ------LKERQYQYENEKAEREVV--------VRQLQQELADTLKK--QSMSE-ASLEVT 1245
Query: 318 TEGKTSLSALTQ-LMKKMPHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLALGT 376
+ + +L TQ L KK+ R Q+ + A C K + + +KL K L +
Sbjct: 1246 SRYRINLEDETQDLKKKLGQIRNQLQEAQDRHTEAVRCAEKMQDHKQKLEKDNAKLKVTV 1305
Query: 377 DAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTEENLDR-LIQNVKIENE 435
+ K+++ + LL N + D ++++ ++ + + E NLD+ + +NV++E E
Sbjct: 1306 KKQMDKIEELQKNLLNA--NLSEDEKEQLKKLM----ELKQSLECNLDQEMKKNVELERE 1359
Query: 436 SDMIRN 441
+N
Sbjct: 1360 ITGFKN 1365
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 32.7 bits (73), Expect = 0.96
Identities = 66/301 (21%), Positives = 124/301 (41%), Gaps = 42/301 (13%)
Query: 274 DGKEKEAILEEEDDLWVRIRHRHIAVVLEEIP-KLMKEISSTKKATEGKTSLSALTQLMK 332
+ KEK +ILE+ED+ ++ A + E +P KL K I+S T+G +S+ Q +
Sbjct: 2742 EAKEKLSILEKEDE--TEVQESKKACMFEPLPIKLSKSIAS---QTDGTLKISSSNQTPQ 2796
Query: 333 KMPHFRKQITKQVVHLNLAEDC--------MNKFKLNIEKLCKTEQDLALGTDAEGQKVK 384
+ + + +NL +C +++F IEK+ + L ++
Sbjct: 2797 IL------VKNAGIQINLQSECSSEEVTEIISQFTEKIEKMQELHAAEILDMESRHISET 2850
Query: 385 DSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTEENLDRL-IQNVKIENESDMIRNWS 443
++++ V + + C ++A++ + S G++ L + SD +W
Sbjct: 2851 ETLKREHYVAVQLLKEECGTLKAVIQCLRSKEGSSIPELAHSDAYQTREICSSDSGSDW- 2909
Query: 444 YLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTP-FIKDIMEDAIDNR----LDSKEWPYC 498
G I QG + + EE+ + P IK ++ A+ N L E PY
Sbjct: 2910 --GQGIYLTHSQGFDIASEGRGEESESATDSFPKKIKGLLR-AVHNEGMQVLSLTESPY- 2965
Query: 499 SQCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRC---AYEVSQAHK 555
G + Q+ +LE+RK I + IT +++ Y+ SQ+H+
Sbjct: 2966 --------SDGEDHSIQQVSEPWLEERKAYINTISSLKDLITKMQLQREAEVYDSSQSHE 3017
Query: 556 S 556
S
Sbjct: 3018 S 3018
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 32.7 bits (73), Expect = 0.96
Identities = 66/301 (21%), Positives = 124/301 (41%), Gaps = 42/301 (13%)
Query: 274 DGKEKEAILEEEDDLWVRIRHRHIAVVLEEIP-KLMKEISSTKKATEGKTSLSALTQLMK 332
+ KEK +ILE+ED+ ++ A + E +P KL K I+S T+G +S+ Q +
Sbjct: 2734 EAKEKLSILEKEDE--TEVQESKKACMFEPLPIKLSKSIAS---QTDGTLKISSSNQTPQ 2788
Query: 333 KMPHFRKQITKQVVHLNLAEDC--------MNKFKLNIEKLCKTEQDLALGTDAEGQKVK 384
+ + + +NL +C +++F IEK+ + L ++
Sbjct: 2789 IL------VKNAGIQINLQSECSSEEVTEIISQFTEKIEKMQELHAAEILDMESRHISET 2842
Query: 385 DSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTEENLDRL-IQNVKIENESDMIRNWS 443
++++ V + + C ++A++ + S G++ L + SD +W
Sbjct: 2843 ETLKREHYVAVQLLKEECGTLKAVIQCLRSKEGSSIPELAHSDAYQTREICSSDSGSDW- 2901
Query: 444 YLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTP-FIKDIMEDAIDNR----LDSKEWPYC 498
G I QG + + EE+ + P IK ++ A+ N L E PY
Sbjct: 2902 --GQGIYLTHSQGFDIASEGRGEESESATDSFPKKIKGLLR-AVHNEGMQVLSLTESPY- 2957
Query: 499 SQCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRC---AYEVSQAHK 555
G + Q+ +LE+RK I + IT +++ Y+ SQ+H+
Sbjct: 2958 --------SDGEDHSIQQVSEPWLEERKAYINTISSLKDLITKMQLQREAEVYDSSQSHE 3009
Query: 556 S 556
S
Sbjct: 3010 S 3010
>gi|31542785 sec1 family domain containing 2 [Homo sapiens]
Length = 684
Score = 32.7 bits (73), Expect = 0.96
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 531 LIVFVIGGITYSEVRCAYE-VSQAHKSCEVIIGSTHVLTP 569
LI+FV+GG+T SEV+ + V+ +VI+ ST +L P
Sbjct: 626 LILFVVGGVTVSEVKMVKDLVASLKPGTQVIVLSTRLLKP 665
>gi|122937249 glutamate receptor interacting protein 2 [Homo
sapiens]
Length = 1141
Score = 32.0 bits (71), Expect = 1.6
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 411 YIFSINGTTEENLDRLIQNVKIENESDMIRNWSYLGVPIVPQSQQGKPLRKDRSA---EE 467
+I SI+GT+ E+ L + + S+ +R L + VPQSQ +PLR R +
Sbjct: 393 HILSIDGTSMEHCSLLEATKLLASISEKVR----LEILPVPQSQ--RPLRPQRQVVKVQR 446
Query: 468 TFQLSRWTPFI 478
+ QL RW P +
Sbjct: 447 SEQLHRWDPCV 457
>gi|41055953 ubiquitin thioesterase 40 [Homo sapiens]
Length = 1247
Score = 31.6 bits (70), Expect = 2.1
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 7/138 (5%)
Query: 360 LNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTT 419
L I K E++ + D GQK+ + + K H K + IF ++ +
Sbjct: 357 LMILKAILLEENNLIPVDQLGQKLLKKIGISWNKKYRKQHGPLRKFLQLHSQIFLLS--S 414
Query: 420 EENLDRLIQNVKIENESDMIRNWSYLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTPFIK 479
+E+ RL++N ++ ESD RN + + P+S L S F ++ ++
Sbjct: 415 DESTVRLLKNSSLQAESDFQRNDQQIFKMLPPES---PGLNNSISCPHWFDIN--DSKVQ 469
Query: 480 DIMEDAIDNRLDSKEWPY 497
I E I+ + KE Y
Sbjct: 470 PIREKDIEQQFQGKESAY 487
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 31.2 bits (69), Expect = 2.8
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 18/177 (10%)
Query: 265 ENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKTSL 324
END+ K K + E+E + EE+ V + + +E + ++E++ + K E
Sbjct: 2148 ENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFE----- 2202
Query: 325 SALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLALGTDAEGQKVK 384
L L + + KQI ++ L+ + ++ FK +E+ K + ++ ++K
Sbjct: 2203 LDLVTLRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEE--KEQAEI---------QIK 2251
Query: 385 DSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQNV-KIENESDMIR 440
+ + + +L N+ + + + A L I TE++LD I+ ++ N + +R
Sbjct: 2252 EESKTAVEMLQNQLKELNEAV-AALCGDQEIMKATEQSLDPPIEEEHQLRNSIEKLR 2307
>gi|45505178 cancer antigen 1 [Homo sapiens]
Length = 641
Score = 30.8 bits (68), Expect = 3.7
Identities = 71/394 (18%), Positives = 155/394 (39%), Gaps = 65/394 (16%)
Query: 201 LDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYD 260
+D +KL + VE+ +ED YKI +L + + +
Sbjct: 215 IDVINKLKENVEELIEDKYKI--------------------------ILEKNDTKKTLQN 248
Query: 261 LLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEG 320
L + +T K+ + + + +L+ + + +I+ ++ + + ++ ++ S + E
Sbjct: 249 LEEVLANTQKHLQESRNDKEMLQLQ---FKKIKANYVCLQERYMTEMQQKNKSVSQYLEM 305
Query: 321 KTSLSALTQLMKKMPHFRKQITKQVVH-LNLAEDCMNKFKLNIEKLCKTEQDLALGTDAE 379
+LS + ++++ +K++ K L+L + + L + Q L E
Sbjct: 306 DKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEFLSLQEEFQKLEKENLEE 365
Query: 380 GQKVKDSMRVLLPVLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQNVKIENESDMI 439
QK+K + LL + N L S N T +N+K++ + + +
Sbjct: 366 RQKLKSRLEKLLTQVRN-------------LQFMSENERT--------KNIKLQQQINEV 404
Query: 440 RNWSYLGVPIVPQSQQGKPLRKDRSAEETFQLSRWTPFIKDIMEDAIDNRLDSKEWPYCS 499
+N + V +S++ + K +A+ QL DI +D S P CS
Sbjct: 405 KNENAKLKQQVARSEEQNYVPKFETAQLKDQLEE--VLKSDITKDT--KTTHSNLLPDCS 460
Query: 500 QCPAVWNGSGAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEV--RCAYEVSQAHKSC 557
C N + RA+ L + + L+ ++G +T ++ A ++ K
Sbjct: 461 PCEERLNPADI------KRASQLASKMH--SLLALMVGLLTCQDIINSDAEHFKESEKVS 512
Query: 558 EVIIGSTHVLTPKKLLDDIKMLNKPKDKVSLIKD 591
++++ L KK D ++++ D+ I+D
Sbjct: 513 DIMLQKLKSLHLKKKTLDKEVIDCDSDEAKSIRD 546
Score = 29.6 bits (65), Expect = 8.2
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 299 VVLEEIPKLMKEISSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKF 358
+ L E+ + +K + ++ + S L L K++ + +ITKQ V + D +NK
Sbjct: 167 MALNEVLQKLKHTNRKQEVRIQELQCSNL-YLEKRVKELQMKITKQQVFI----DVINKL 221
Query: 359 KLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLN 396
K N+E+L + + + L E K +++ L VL N
Sbjct: 222 KENVEELIEDKYKIIL----EKNDTKKTLQNLEEVLAN 255
>gi|154350241 brefeldin A-inhibited guanine nucleotide-exchange
protein 3 [Homo sapiens]
Length = 2177
Score = 30.4 bits (67), Expect = 4.8
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 302 EEIPKLMKEISSTK------KATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCM 355
E + KL KE S +K T +L L ++K PH ++ K ++ L LA +
Sbjct: 3 EILRKLQKEASGSKYKAIKESCTWALETLGGLDTIVKIPPHVLRE--KCLLPLQLALESK 60
Query: 356 NKFKL------NIEKLCKTEQDLALGTDAEGQKVKDSMRVLLPVLLNKNHDNCDKIRAIL 409
N KL ++KL E+ +++ TD++ +++ + + + V + N D ++ +L
Sbjct: 61 N-VKLAQHALAGMQKLLSEERFVSMETDSDEKQLLNQILNAVKVTPSLNEDLQVEVMKVL 119
Query: 410 LYI-----FSINGT 418
L I F +NG+
Sbjct: 120 LCITYTPTFDLNGS 133
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 30.4 bits (67), Expect = 4.8
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 34/148 (22%)
Query: 212 EKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKY 271
EK LE Y K+D+ + +++ +DR + V EL + Y +
Sbjct: 428 EKNLEQYNKLDQDL---NEVKARVEELDRKYYEVKNKKDELQSER-----------NYLW 473
Query: 272 KTDGKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKTSLSALTQLM 331
+ + E++A+ + +DL E+ +L++ A GK L+ + +
Sbjct: 474 REENAEQQALAAKREDL-------------EKKQQLLR-------AATGKAILNGIDSIN 513
Query: 332 KKMPHFRKQITKQVVHLNLAEDCMNKFK 359
K + HFR++ Q V MN F+
Sbjct: 514 KVLDHFRRKGINQHVQNGYHGIVMNNFE 541
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 30.4 bits (67), Expect = 4.8
Identities = 37/202 (18%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 189 DENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTV 248
++ G++++ K + +++ +L E+ I+ + + KT Q R + +S
Sbjct: 1098 EQTLGLQFQKKIKELQARIEELEEE-------IEAERATRAKTEKQRSDYARELEELSER 1150
Query: 249 LHELTFQAMAYDLLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLM 308
L E L + + K +EA L+ E + +R +H + + +L
Sbjct: 1151 LEEAGGVTSTQIELNKKREAEFLKLRRDLEEATLQHEA-MVAALRKKHA----DSVAELG 1205
Query: 309 KEISSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKT 368
++I + ++ + +L K+ F+ +I L+ + + ++K K N+EK+C+T
Sbjct: 1206 EQIDNLQRVKQ---------KLEKEKSEFKLEIDD----LSSSMESVSKSKANLEKICRT 1252
Query: 369 EQDLALGTDAEGQKVKDSMRVL 390
+D + ++++ S+ L
Sbjct: 1253 LEDQLSEARGKNEEIQRSLSEL 1274
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 30.4 bits (67), Expect = 4.8
Identities = 52/325 (16%), Positives = 134/325 (41%), Gaps = 44/325 (13%)
Query: 199 KPLDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMA 258
K D K Q ++KK ++ E + K +++ + + F+ L+ Q++
Sbjct: 1963 KSKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEA-----QNLSMQSVR 2017
Query: 259 YDLLPIENDTYKYKTD----GKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISST 314
D + ++ + KE++ + ++ L + R + IA + E I + +
Sbjct: 2018 MDNFQLTKKLHESLEEIRIVAKERDELRRIKESLKME-RDQFIATLREMIARDRQNHQVK 2076
Query: 315 KKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLAL 374
+ LT+ +++ K++ K+ ++ +C+N+ L++EK + +++L++
Sbjct: 2077 PEKRLLSDGQQHLTESLREKCSRIKELLKRYSEMDDHYECLNRLSLDLEKEIEFQKELSM 2136
Query: 375 GTDAEGQKVKDSMRVLLPVLLNKN---------------HDNCDKIRAILLYIFSINGTT 419
A + LP L K+ H K++ +L Y+ I
Sbjct: 2137 RVKA---------NLSLPYLQTKHIEKLFTANQRCSMEFHRIMKKLKYVLSYVTKIKEEQ 2187
Query: 420 EENLDRLIQNV--KIENESDMIRNWSYLGVPIVPQSQQGKPLRKDRSAE-------ETFQ 470
E++++ + ++E + +++ +L S++ + L+ +++ + + F
Sbjct: 2188 HESINKFEMDFIDEVEKQKELLIKIQHLQQDCDVPSRELRDLKLNQNMDLHIEEILKDFS 2247
Query: 471 LSRWTPFIKDIMEDAIDNRLDSKEW 495
S + P IK + + NR + ++
Sbjct: 2248 ESEF-PSIKTEFQQVLSNRKEMTQF 2271
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 30.4 bits (67), Expect = 4.8
Identities = 35/187 (18%), Positives = 76/187 (40%), Gaps = 27/187 (14%)
Query: 203 NASKLAQLVEKKLEDYYKIDEKSLIKG----KTHSQLLIIDRGFDPVSTVLHELTFQ--- 255
N K + ++KK E+ Y + ++ IK +T Q +I+ +L + T +
Sbjct: 868 NKEKFEKQLKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGE 927
Query: 256 ------AMAYDLLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMK 309
+ + +E + K + EK +EE+ + + E K K
Sbjct: 928 LEDTQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCE----------SAAHEADLKRQK 977
Query: 310 EISSTKKATEGKTSLSA----LTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKLNIEKL 365
I T A + K + L+++ K++ H ++ + +HL+ + +++ K +EK
Sbjct: 978 VIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKK 1037
Query: 366 CKTEQDL 372
++L
Sbjct: 1038 TNAVKEL 1044
>gi|171846278 leucine-rich repeat kinase 2 [Homo sapiens]
Length = 2527
Score = 30.0 bits (66), Expect = 6.2
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 312 SSTKKATEGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFKLN---IEKLCKT 368
SS+K+ + S +AL+ L+++ +FRK + + +HLN+ E M K + E CK
Sbjct: 409 SSSKEVFQA--SANALSTLLEQNVNFRKILLSKGIHLNVLE-LMQKHIHSPEVAESGCKM 465
Query: 369 EQDLALGTDAEGQKVKDSMRVLLPVLLN--KNHD-----NCDKIRAILLYIFSINGTTEE 421
L G++ D M ++P +L K H+ + +RAIL +I + G EE
Sbjct: 466 LNHLFEGSNTS----LDIMAAVVPKILTVMKRHETSLPVQLEALRAILHFI--VPGMPEE 519
Query: 422 N 422
+
Sbjct: 520 S 520
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 30.0 bits (66), Expect = 6.2
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 264 IENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEI-SSTKKATEGKT 322
+EN+ K + KEKE I E+++L R++ + E+ K KE+ T+KA E
Sbjct: 323 LENEKKKREIAEKEKERIEREKEELMERLKQ-----IEEQTIKAQKELEEQTRKALELDQ 377
Query: 323 SLSALTQLMKKMPHFRK--QITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLALGTDAEG 380
+ +++ R+ + K + A+ N+ +L E L + +AL +A+
Sbjct: 378 ERKRAKEEAERLEKERRAAEEAKSAIAKQAADQMKNQEQLAAE-LAEFTAKIALLEEAKK 436
Query: 381 QKVKDS 386
+K +++
Sbjct: 437 KKEEEA 442
>gi|215276987 glutathione S-transferase alpha 2 [Homo sapiens]
Length = 222
Score = 30.0 bits (66), Expect = 6.2
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 166 NAKGKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKS 225
N GKD + + D + A L E + S+P + +KLA + EK Y+ EK
Sbjct: 80 NLYGKDIKEKALIDMYIEGIADLGEMILLLPFSQPEEQDAKLALIQEKTKNRYFPAFEKV 139
Query: 226 LIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYD 260
L K+H Q ++ L EL + D
Sbjct: 140 L---KSHGQDYLVGNKLSRADIHLVELLYYVEELD 171
>gi|4758128 doublecortin-like kinase 1 [Homo sapiens]
Length = 729
Score = 30.0 bits (66), Expect = 6.2
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 41/155 (26%)
Query: 184 VCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFD 243
VC+++DEN G P + S+ + + + YK+ G+T I D F
Sbjct: 361 VCSSMDENDG------PGEEVSEEGFQIPATITERYKV-------GRT-----IGDGNFA 402
Query: 244 PVSTVLHELTFQAMAYDLLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEE 303
V + T + A ++ K+ + KE +++ E + R++H +I +++EE
Sbjct: 403 VVKECVERSTAREYALKIIK--------KSKCRGKEHMIQNEVSILRRVKHPNIVLLIEE 454
Query: 304 IP---------------KLMKEISSTKKATEGKTS 323
+ L I+ST K TE S
Sbjct: 455 MDVPTELYLVMELVKGGDLFDAITSTNKYTERDAS 489
>gi|197209974 coiled-coil and C2 domain containing 2A isoform a [Homo
sapiens]
Length = 1620
Score = 30.0 bits (66), Expect = 6.2
Identities = 17/74 (22%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 212 EKKLEDYYKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYDLLP--IENDTY 269
+ +++ +KID ++ G + + +I++RGFD V + L E ++ + + P + ++
Sbjct: 1196 QARIDGTFKIDIPPVLLGYSKERNMILERGFDSVRS-LSEGSYITLFITIEPQLVPGESI 1254
Query: 270 KYKTDGKEKEAILE 283
+ K + +E E +L+
Sbjct: 1255 REKFESQEDEKLLQ 1268
>gi|90193626 cadherin 9, type 2 preproprotein [Homo sapiens]
Length = 789
Score = 29.6 bits (65), Expect = 8.2
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 451 PQSQQGKPLRKDRSAEETFQLSRWTPFIKDI-MEDAIDNRL-----DSKEWPYCSQCPAV 504
P++++ LR+D E FQ+ R P ++I ++D I RL D PY S
Sbjct: 680 PEAREDSKLRRDVMPETIFQIRRTVPLWENIDVQDFIHRRLKENDADPSAPPYDSLATYA 739
Query: 505 WNGSGAVS 512
+ G+ +++
Sbjct: 740 YEGNDSIA 747
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 29.6 bits (65), Expect = 8.2
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 244 PVSTVLHELTFQAMAYDLLP----IENDTYKYK-TDGKEKEAILEEEDDLWVRI 292
P + E+T Q+ P IEN YK TDG KE I++ E D W+R+
Sbjct: 1044 PANLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGSRKELIVDAE-DTWIRL 1096
>gi|29294627 PTPRF interacting protein binding protein 1 isoform 1
[Homo sapiens]
Length = 1005
Score = 29.6 bits (65), Expect = 8.2
Identities = 28/135 (20%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 261 LLPIENDTYKYKTDGKEKEAILEEEDDLWVRIRHRHIAVVLEE--IPKLMKEISSTKKAT 318
L +E D Y+ ++ E +++E +DL +++ + E + E++S K+
Sbjct: 183 LTAVEKDRLDYEDKFRDTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKDELASLKEQL 242
Query: 319 EGKTSLSALTQLMKKMPHFRKQITKQVVHLNLAEDCMNKFK---LNIEKLCKTEQDLALG 375
E K S + +L +K+ K ++V + E+ K K + ++K+ K + L
Sbjct: 243 EEKE--SEVKRLQEKLVCKMKGEGVEIVDRD--ENFKKKLKEKNIEVQKMKKAVESLMAA 298
Query: 376 TDAEGQKVKDSMRVL 390
+ + +K++D + L
Sbjct: 299 NEEKDRKIEDLRQCL 313
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,720,700
Number of Sequences: 37866
Number of extensions: 929729
Number of successful extensions: 2513
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2450
Number of HSP's gapped (non-prelim): 43
length of query: 592
length of database: 18,247,518
effective HSP length: 108
effective length of query: 484
effective length of database: 14,157,990
effective search space: 6852467160
effective search space used: 6852467160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.