STXBP1 35399

Name: STXBP1	Sequence: fasta or formatted (594aa)		NCBI GI: 73760415
Description: syntaxin binding protein 1 isoform b		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [603aa] syntaxin binding protein 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 38 2 C cysteine 1.2 7 2 D aspartate 6.9 41 3 E glutamate 7.4 44 2 F phenylalanine 2.2 13 2 G glycine 3.9 23 2 H histidine 2.7 16 1 I isoleucine 7.6 45 2 K lysine 8.8 52 3 L leucine 10.1 60 2 M methionine 3.2 19 1 N asparagine 2.7 16 1 P proline 4.7 28 2 Q glutamine 3.5 21 1 R arginine 4.9 29 3 S serine 7.7 46 3 T threonine 6.2 37 2 V valine 5.2 31 2 W tryptophan 0.8 5 1 Y tyrosine 3.9 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syntaxin binding protein 1 isoform b STXBP1 0.973 syntaxin binding protein 1 isoform a STXBP2 0.640 syntaxin binding protein 2 isoform a STXBP2 0.632 syntaxin binding protein 2 isoform b STXBP3 0.497 syntaxin binding protein 3 VPS45 0.075 vacuolar protein sorting 45A SCFD1 0.048 vesicle transport-related protein isoform a SCFD1 0.034 vesicle transport-related protein isoform b VPS33A 0.026 vacuolar protein sorting 33A C17orf85 0.010 ELG protein isoform a LOC400986 0.010 PREDICTED: protein immuno-reactive with anti-PTH po... LOC400986 0.010 PREDICTED: protein immuno-reactive with anti-PTH po... GOLGA1 0.009 golgin 97 SCFD2 0.009 sec1 family domain containing 2 SYNE2 0.009 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.009 spectrin repeat containing, nuclear envelope 2 isof... EVC2 0.008 limbin CCDC147 0.008 coiled-coil domain containing 147 UACA 0.007 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.007 uveal autoantigen with coiled-coil domains and ankyr... KIAA0947 0.007 hypothetical protein LOC23379 TPR 0.006 nuclear pore complex-associated protein TPR ECD 0.005 suppressor of S. cerevisiae gcr2 isoform 3 ECD 0.005 suppressor of S. cerevisiae gcr2 isoform 2 ECD 0.005 suppressor of S. cerevisiae gcr2 isoform 1 SMC1B 0.004 SMC1 structural maintenance of chromosomes 1-like 2 ... SHROOM1 0.004 shroom family member 1 PMFBP1 0.004 polyamine modulated factor 1 binding protein 1 isof... GOLGB1 0.004 golgi autoantigen, golgin subfamily b, macrogolgin ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.