Guide to the Human Genome
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Name: STXBP2 Sequence: fasta or formatted (593aa) NCBI GI: 188528689
Description:

syntaxin binding protein 2 isoform a

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [590aa] syntaxin binding protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         54           2
 C cysteine            1.3          8           2
 D aspartate           6.2         37           3
 E glutamate           7.8         46           2
 F phenylalanine       2.5         15           2
 G glycine             4.6         27           2
 H histidine           2.7         16           1
 I isoleucine          5.4         32           1
 K lysine              7.1         42           2
 L leucine            12.1         72           3
 M methionine          2.7         16           1
 N asparagine          2.0         12           1
 P proline             5.1         30           1
 Q glutamine           3.4         20           2
 R arginine            5.6         33           2
 S serine              6.7         40           2
 T threonine           5.7         34           2
 V valine              6.1         36           2
 W tryptophan          1.0          6           1
 Y tyrosine            2.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   syntaxin binding protein 2 isoform a 
STXBP2                0.991   syntaxin binding protein 2 isoform b 
STXBP1                0.643   syntaxin binding protein 1 isoform b 
STXBP1                0.641   syntaxin binding protein 1 isoform a 
STXBP3                0.439   syntaxin binding protein 3 
VPS45                 0.091   vacuolar protein sorting 45A 
SCFD1                 0.055   vesicle transport-related protein isoform a 
SCFD1                 0.044   vesicle transport-related protein isoform b 
VPS33A                0.022   vacuolar protein sorting 33A 
VPS33B                0.022   vacuolar protein sorting 33B (yeast homolog)) [Homo...
DIAPH1                0.009   diaphanous 1 isoform 2 
DIAPH1                0.009   diaphanous 1 isoform 1 
CCDC147               0.009   coiled-coil domain containing 147 
CEP290                0.007   centrosomal protein 290kDa 
MYH10                 0.006   myosin, heavy polypeptide 10, non-muscle 
TRIM69                0.006   tripartite motif-containing 69 isoform a 
SMC1B                 0.006   SMC1 structural maintenance of chromosomes 1-like 2 ...
TRIM69                0.006   tripartite motif-containing 69 isoform b 
LRRCC1                0.005   sodium channel associated protein 2 isoform b [Homo...
LRRCC1                0.005   sodium channel associated protein 2 isoform a [Homo...
GCC2                  0.005   GRIP and coiled-coil domain-containing 2 
CASP8AP2              0.005   caspase 8 associated protein 2 
CASP8AP2              0.005   caspase 8 associated protein 2 
CASP8AP2              0.005   caspase 8 associated protein 2 
SPTBN5                0.004   spectrin, beta, non-erythrocytic 5 
CCDC67                0.004   coiled-coil domain containing 67 
NUMA1                 0.004   nuclear mitotic apparatus protein 1 
IQCE                  0.004   IQ motif containing E isoform 1 
IQCE                  0.004   IQ motif containing E isoform 2 
NOTCH3                0.004   Notch homolog 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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