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Search of human proteins with 118150660
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118150660 erythropoietin 4 immediate early response [Homo
sapiens]
(426 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118150660 erythropoietin 4 immediate early response [Homo sap... 858 0.0
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 48 1e-05
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 47 3e-05
gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens] 46 6e-05
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 45 2e-04
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 44 2e-04
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 44 4e-04
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 42 8e-04
gi|55953127 RWD domain containing 1 isoform b [Homo sapiens] 42 8e-04
gi|55953125 RWD domain containing 1 isoform b [Homo sapiens] 42 8e-04
gi|55953123 RWD domain containing 1 isoform a [Homo sapiens] 42 8e-04
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] 42 0.001
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|148839339 nexilin (F actin binding protein) [Homo sapiens] 40 0.003
gi|5032243 makorin ring finger protein 3 [Homo sapiens] 40 0.005
gi|24415404 MDN1, midasin homolog [Homo sapiens] 40 0.005
gi|223468622 makorin ring finger protein 1 isoform 2 [Homo sapiens] 39 0.007
gi|223468620 makorin ring finger protein 1 isoform 1 [Homo sapiens] 39 0.007
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 39 0.009
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 39 0.009
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 39 0.009
gi|125987603 cleavage and polyadenylation specific factor 4, 30k... 38 0.020
gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa... 38 0.020
gi|193788659 cleavage and polyadenylation specific factor 4-like... 37 0.026
gi|221219020 NYD-SP11 protein [Homo sapiens] 37 0.045
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 37 0.045
gi|30794372 polybromo 1 isoform 1 [Homo sapiens] 37 0.045
gi|93102371 polybromo 1 isoform 2 [Homo sapiens] 37 0.045
gi|41281917 polybromo 1 isoform 4 [Homo sapiens] 37 0.045
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 37 0.045
>gi|118150660 erythropoietin 4 immediate early response [Homo
sapiens]
Length = 426
Score = 858 bits (2216), Expect = 0.0
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQV 60
MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQV
Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQV 60
Query: 61 AQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCK 120
AQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCK
Sbjct: 61 AQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCK 120
Query: 121 FSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVC 180
FSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVC
Sbjct: 121 FSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVC 180
Query: 181 KHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERER 240
KHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERER
Sbjct: 181 KHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERER 240
Query: 241 SALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPE 300
SALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPE
Sbjct: 241 SALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPE 300
Query: 301 LVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVDETGITVASLERFSTYTS 360
LVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVDETGITVASLERFSTYTS
Sbjct: 301 LVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVDETGITVASLERFSTYTS 360
Query: 361 DKDENKLSEASGGRAENGERSDLEEDNEREGTENGAIDAVPVDENLFTGEDLDELEEELN 420
DKDENKLSEASGGRAENGERSDLEEDNEREGTENGAIDAVPVDENLFTGEDLDELEEELN
Sbjct: 361 DKDENKLSEASGGRAENGERSDLEEDNEREGTENGAIDAVPVDENLFTGEDLDELEEELN 420
Query: 421 TLDLEE 426
TLDLEE
Sbjct: 421 TLDLEE 426
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 48.1 bits (113), Expect = 1e-05
Identities = 105/471 (22%), Positives = 188/471 (39%), Gaps = 110/471 (23%)
Query: 4 KKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNP------ 57
K + GS++ E K KI E + G + +F+++ Q K + P
Sbjct: 156 KSNKKWDGSEEDEDNSK-KIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIES 214
Query: 58 -----------RQVAQSEAEKK----LKKDDKKKELQELNELFKPVVAAQKISKGADPKS 102
+ VAQ +AEKK K+D++K +L++L E +++ G +S
Sbjct: 215 GNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKE-------KEELETGKKDQS 267
Query: 103 VVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTM---DNWDEKKLE 159
KQ K + KF + T++ K + I A +E+ E T DN +KK +
Sbjct: 268 ------KQ----KESQRKFEEE-TVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKK 316
Query: 160 EVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKK 219
+ KK + EK+K K + K ++A++ AL LK+
Sbjct: 317 DKKKKKGEKEEKEKEKKKGPSKATVKAMQ--------------------EALAK---LKE 353
Query: 220 DKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKA 279
+++++++E+E ++ L E E K E L +KR+R K +++ ER++
Sbjct: 354 EEERQKREEEERIKRLEELE--------AKRKEEERLEQEKRER-----KKQKEKERKER 400
Query: 280 DFKAGKALVISGRE----------VFEFRPELVNDDD---------EEADDTRYTQGTGG 320
K GK L S RE + + + V D E+ + Q
Sbjct: 401 LKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLES 460
Query: 321 DEVDDSVSV--------NDIDLSLYIPRDV---DETGITVASLERFSTYTSDKDENKLSE 369
EV +S+ + + P V +E A L+ + SD++ K+ E
Sbjct: 461 KEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKV-E 519
Query: 370 ASGGRAENGERSDLEEDNEREGTENGAIDAVPVDENLFTGEDLDELEEELN 420
+ E E + EE+ E E E+ + +E G + DE +E+++
Sbjct: 520 GNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVS 570
Score = 44.3 bits (103), Expect = 2e-04
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 20/208 (9%)
Query: 218 KKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERR 277
+K+K ++ +D+I L+ L G K KK+K ++K D E D+ +
Sbjct: 5 QKNKSEDSTKDDIDLDALAAEIE---GAGAAKEQEPQKSKGKKKKEKKKQDFDEDDILKE 61
Query: 278 KADFKAGKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLY 337
+ + + RE +P N+++ + D + G + S +D D
Sbjct: 62 LEELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQ-----SFDDNDSEEL 116
Query: 338 IPRDVDETGITVASLERFSTYTSDKDENKLSEASGGRAENGER----SDLEEDNEREGTE 393
+D +E +S D D NKL + + G+A+ + S+ +EDN ++ E
Sbjct: 117 EDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKE 176
Query: 394 NGAIDAVPVDENLFTGEDLDELEEELNT 421
I++ +GE DE +E L +
Sbjct: 177 RSRINS--------SGESGDESDEFLQS 196
Score = 36.2 bits (82), Expect = 0.058
Identities = 89/404 (22%), Positives = 163/404 (40%), Gaps = 49/404 (12%)
Query: 32 KNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQE---LNELFKPV 88
K++ K + A+ +++ Q Q KK KK+ KK++ E L EL +
Sbjct: 8 KSEDSTKDDIDLDALAAEIEGAGAAKEQEPQKSKGKK-KKEKKKQDFDEDDILKELEELS 66
Query: 89 VAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELE-K 147
+ AQ I + +V + + T DK K +K +K+S + D EELE K
Sbjct: 67 LEAQGIKADRETVAVKPTENNEEEFTSKDKKKKG------QKGKKQS-FDDNDSEELEDK 119
Query: 148 DTMDNWDEK-KLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICM 206
D+ K K+E + K PK K +A ++NK W G +
Sbjct: 120 DSKSKKTAKPKVEMYSGSDDDDDFNKLPK-----KAKGKAQKSNKK---W--DGSEEDED 169
Query: 207 YRHALPPGFVLKKDKKKEEKEDEI--SLEDLIERERSALGPNVTKITLESFLAWK-KRKR 263
+ + + ++ DE S + + +++ GPN+ + ++K K
Sbjct: 170 NSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVA 229
Query: 264 QEKIDKLEQDMERRKADFKAGKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGDEV 323
Q+K +K E+ ER+K D + K + +E E + D ++ + R + + V
Sbjct: 230 QKKAEKKER--ERKKRDEEKAKLRKLKEKEELETGKK---DQSKQKESQRKFEE---ETV 281
Query: 324 DDSVSVNDIDLSLYIPRDVDETGITVASLERFSTYTSDKDENKLSEASGGRAENGERSDL 383
V+V +TG+ AS E+ T T+ +D+N+ + + + +
Sbjct: 282 KSKVTV--------------DTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEE 327
Query: 384 EEDNEREGTENGAIDAV-PVDENLFTGEDLDELEEELNTLDLEE 426
+E +++G + A+ L E+ + EEE LEE
Sbjct: 328 KEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEE 371
Score = 35.0 bits (79), Expect = 0.13
Identities = 78/403 (19%), Positives = 156/403 (38%), Gaps = 61/403 (15%)
Query: 4 KKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQS 63
K++ + G +++QK+ ++ E++T K + + + A+
Sbjct: 256 KEELETGKKDQSKQKESQRKFEEET--------VKSKVTVDTGVIPASEEKAETPTAAED 307
Query: 64 EAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSH 123
+ E KK DKKK+ E E +K K K+ V A + K ++ +
Sbjct: 308 DNEGDKKKKDKKKKKGEKEE-------KEKEKKKGPSKATVKAMQEALAKLKEEEERQKR 360
Query: 124 DLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHF 183
+ E + KR ++A+ +E E+ + + KK +E K E+ K + +++ K
Sbjct: 361 E---EEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERK-----ERLKKEGKLLTKSQ 412
Query: 184 LEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERERSAL 243
EA + + G ++ + +LP + +DKK+++ ++ +++ E
Sbjct: 413 REARARAEATLKLLQAQGVEVPS-KDSLPKKRPIYEDKKRKKIPQQLESKEVSESMELCA 471
Query: 244 GPNVTKITL----ESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVF---- 295
V + + E+ + + ++ D D E +D + K + G +V
Sbjct: 472 AVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEK---VEGNKVHIEVK 528
Query: 296 ---------EFRPELVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVDETG 346
E E + +EE ++ ++G+ GDE D+ VS D ++G
Sbjct: 529 ENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVS------------DEKDSG 576
Query: 347 ITV-----ASLERFSTYTSDKDENKLSEASGGRAENGERSDLE 384
T+ + S Y SD D K A E+ LE
Sbjct: 577 KTLDKKPSKEMSSDSEYDSDDDRTKEERAYDKAKRRIEKRRLE 619
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 47.0 bits (110), Expect = 3e-05
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 217 LKKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMER 276
LK KKKE+KE + E+ E+E+ L + + + S ++ KR EK+DK Q ME
Sbjct: 228 LKTAKKKEKKEKKKKQEE--EQEKKKL-TQIQESQVTSHNKERRSKRDEKLDKKSQAMEE 284
Query: 277 RKADFKAGK---ALVISGREVFEFRPELVNDDDEEADD------TRYTQGTGGDEVDDSV 327
KA+ + K A +++ ++ + +D++EE DD R ++ + DE ++
Sbjct: 285 LKAEREKRKNRTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKE 344
Query: 328 SVNDIDLSLYIPRDVDETGITVASLERF 355
+ + +P +++ ++ LER+
Sbjct: 345 EIPPKSQPVSLPEELNRVRLSRHKLERW 372
Score = 28.9 bits (63), Expect = 9.3
Identities = 29/163 (17%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 17 QKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKK 76
++ EK E + F K+ +++F ++K + ++ + E +KK +++ +KK
Sbjct: 197 EQMTEKEREQELFNRIEKREVLKRRF------EIKKKLKTAKKKEKKEKKKKQEEEQEKK 250
Query: 77 ELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSV 136
+L ++ E ++ SK + ++ + + + + +L +++ K S
Sbjct: 251 KLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQPLKTSE 310
Query: 137 YIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIV 179
+EE E D ++ + + E E+ PK+Q V
Sbjct: 311 VYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPV 353
>gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]
Length = 291
Score = 46.2 bits (108), Expect = 6e-05
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 3 PKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQ 62
P++ + G K Q K+K +K +K G KQ+K + G N A
Sbjct: 109 PEESTKKEGVKDTPQAAKQK---NKNLKAGHKNG-KQKKMKRKWP-----GPGNKGSNAL 159
Query: 63 SEAEKKLKKDDKKKELQE-LNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKF 121
++D K KE Q+ L++ F ++ K +C +F + +C KGD+CKF
Sbjct: 160 LRNSGSQEEDGKPKEKQQHLSQAFINQHTVERKGKQ------ICKYFLERKCIKGDQCKF 213
Query: 122 SHDLTLERKCEKRSVYI 138
HD +E+K E Y+
Sbjct: 214 DHDAEIEKKKEMCKFYV 230
Score = 32.0 bits (71), Expect = 1.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 99 DPKSVVCAFFKQGQCTKGDKCKFSHD 124
+ K +C F+ QG CT+G+ C + H+
Sbjct: 220 EKKKEMCKFYVQGYCTRGENCLYLHN 245
Score = 28.9 bits (63), Expect = 9.3
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 34 KKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKK-----ELQELNELFKPV 88
K KQQ +A +Q ++ +Q+ + E+K K D+ K E+++ E+ K
Sbjct: 171 KPKEKQQHLSQAFINQHTV-ERKGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFY 229
Query: 89 VAAQKISKGAD----PKSVVCAFFKQG-QCTKGDKCKFSH 123
V ++G + C F+ G +C +G+ CKFSH
Sbjct: 230 VQGY-CTRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSH 268
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 103 VVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYI 138
V+C +F +G+CT GD C FSHD+ L +K E YI
Sbjct: 394 VICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYI 429
Score = 31.6 bits (70), Expect = 1.4
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 111 GQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAE 170
G C GD C FSHD E E + A D E + DEK++EE+ KK G
Sbjct: 455 GNCINGDDCMFSHDPLTEETRELLDKML-ADDAEAGAE-----DEKEVEEL--KKQGINP 506
Query: 171 KKKP 174
KP
Sbjct: 507 LPKP 510
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Query: 10 GGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKL 69
G S E KK+++ KG +Q + + V G+ P+++ + E +
Sbjct: 186 GSSFSKESGKKQRM-----------KGVQQGIEQRVKSFNVGRGRGLPKKIKRKERGGRT 234
Query: 70 KKDDK----KKELQELNELFKP--VVAAQKISKGA--DPKSVVCAFFKQGQCTKGDKCKF 121
K + QE N+ K V+ + I++ +C +F +G+C KGD+CKF
Sbjct: 235 NKGPNVFSVSDDFQEYNKPGKKWKVMTQEFINQHTVEHKGKQICKYFLEGRCIKGDQCKF 294
Query: 122 SHDLTLERKCEKRSVYI 138
HD LE++ E Y+
Sbjct: 295 DHDAELEKRKEICKFYL 311
Score = 37.7 bits (86), Expect = 0.020
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 32/100 (32%)
Query: 99 DPKSVVCAFFKQGQCTK------------------------GDKCKFSHDLTLERKCEKR 134
+ + +C F+ QG CTK GD CKFSHD L ++ +K
Sbjct: 301 EKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGAKCYQGDNCKFSHD-DLTKETKKL 359
Query: 135 SVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKP 174
+ DEEL N DE++LEE+ +K G KP
Sbjct: 360 LDKVLNTDEEL-----INEDERELEEL--RKRGITPLPKP 392
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 43.5 bits (101), Expect = 4e-04
Identities = 59/297 (19%), Positives = 133/297 (44%), Gaps = 41/297 (13%)
Query: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQV 60
M +++ A ++ ++++K E + + K+ A++++ IK + + ++ R
Sbjct: 317 MREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKE--EEKRAAEERQRAR 374
Query: 61 AQSEAEKKLKKDDKKKELQELNELFKPV-VAAQKIS-----------KGADPKSVVCAFF 108
A+ E + K+++ + K+L+E + + +K+ K + K
Sbjct: 375 AEEEEKAKVEEQKRNKQLEEKKHAMQETKIKGEKVEQKIEGKWVNEKKAQEDKLQTAVLK 434
Query: 109 KQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGE 168
KQG+ KG K + + E K + I +DE+++KD +++++ +++K G
Sbjct: 435 KQGE-EKGTKVQAKREKLQEDKPTFKKEEI--KDEKIKKDKEP---KEEVKSFMDRKKGF 488
Query: 169 AEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHA-----LPPGFVLKKDKKK 223
E K + + H L+ EN + PGG + A + G L++ +++
Sbjct: 489 TEVKSQNGEFMT-HKLKHTENT-----FSRPGGRASVDTKEAEGAPQVEAGKRLEELRRR 542
Query: 224 EEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKAD 280
+ + E L ++++ A + LE K+KR+E+ LE++ +RRK +
Sbjct: 543 RGETESEEFEKLKQKQQEAA------LELEEL----KKKREERRKVLEEEEQRRKQE 589
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 42.4 bits (98), Expect = 8e-04
Identities = 74/328 (22%), Positives = 130/328 (39%), Gaps = 60/328 (18%)
Query: 4 KKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQV--KFGQQNPRQVA 61
KK A+ ++E K K +D KN K ++K +K T + G +
Sbjct: 289 KKNAKKSSDAESEDSKDAK--KDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKD 346
Query: 62 QSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKF 121
+ +KKLKKDDKKK+ +K + D +S GD
Sbjct: 347 TKKDKKKLKKDDKKKD-------------TKKYPESTDTES-------------GDAKDA 380
Query: 122 SHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCK 181
+D +K K D + ++ +K T E +LE ++K + +KK KT
Sbjct: 381 RNDSRNLKKASKN----DDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTD---- 432
Query: 182 HFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERERS 241
++++N++ GD KK KK E+K + S +D ++++
Sbjct: 433 -NKKSVKNDEESTDADSEPKGD-------------SKKGKKDEKKGKKDSKKD--DKKKD 476
Query: 242 ALGPNVTKITLESFLAWKKRK---RQEKIDKLEQDMERRKADFKAGKALVISGREVFEFR 298
A N +ES L KK K +++K K + + RK S + F+
Sbjct: 477 A-KKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTS 535
Query: 299 PELVNDDDEEADDTRYTQGTGGDEVDDS 326
+ + D E++++ Y G ++D+S
Sbjct: 536 TK-IKGSDTESEESLYKPG-AKKKIDES 561
Score = 34.7 bits (78), Expect = 0.17
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 23/196 (11%)
Query: 2 PPKKQAQAGGSKKAEQKKKEKIIEDKT--------FGLKNKKGAKQQKFIKAVTHQVKFG 53
P KK ++ G A + ++I+E+KT LK+ +Q K K+ + +
Sbjct: 126 PLKKDSKKKGGSYATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKS-SSETNPE 184
Query: 54 QQNPRQVAQ--SEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCA----- 106
QN + V++ S+ +KK K+ KK + L+ P ++ DP S +C+
Sbjct: 185 SQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLN 244
Query: 107 ---FFKQGQCTKGDKCKFSHDLTLERKCEKRSV-YIDARDEELEKDTMDNWDEKKLEEVV 162
GQ D + D L + S Y + +KDT N + E
Sbjct: 245 VDFLMLVGQ---SDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESE 301
Query: 163 NKKHGEAEKKKPKTQI 178
+ K + + KK K +
Sbjct: 302 DSKDAKKDSKKVKKNV 317
>gi|55953127 RWD domain containing 1 isoform b [Homo sapiens]
Length = 147
Score = 42.4 bits (98), Expect = 8e-04
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 20/120 (16%)
Query: 218 KKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERR 277
+++KK++EKE E + + L T +T+E+FL WK + E LE +R
Sbjct: 27 EEEKKQKEKEAEEAEKQLFHG---------TPVTIENFLNWKAKFDAE---LLEIKKKRM 74
Query: 278 KADFKAGKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGD-EVDDSVSVNDIDLSL 336
K + +AGK +SG+++FE D + + D ++ + G + EVD+S+ DL L
Sbjct: 75 KEEEQAGKN-KLSGKQLFE------TDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLEL 127
>gi|55953125 RWD domain containing 1 isoform b [Homo sapiens]
Length = 147
Score = 42.4 bits (98), Expect = 8e-04
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 20/120 (16%)
Query: 218 KKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERR 277
+++KK++EKE E + + L T +T+E+FL WK + E LE +R
Sbjct: 27 EEEKKQKEKEAEEAEKQLFHG---------TPVTIENFLNWKAKFDAE---LLEIKKKRM 74
Query: 278 KADFKAGKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGD-EVDDSVSVNDIDLSL 336
K + +AGK +SG+++FE D + + D ++ + G + EVD+S+ DL L
Sbjct: 75 KEEEQAGKN-KLSGKQLFE------TDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLEL 127
>gi|55953123 RWD domain containing 1 isoform a [Homo sapiens]
Length = 243
Score = 42.4 bits (98), Expect = 8e-04
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 20/120 (16%)
Query: 218 KKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERR 277
+++KK++EKE E + + L T +T+E+FL WK + E LE +R
Sbjct: 123 EEEKKQKEKEAEEAEKQLFHG---------TPVTIENFLNWKAKFDAE---LLEIKKKRM 170
Query: 278 KADFKAGKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGD-EVDDSVSVNDIDLSL 336
K + +AGK +SG+++FE D + + D ++ + G + EVD+S+ DL L
Sbjct: 171 KEEEQAGKN-KLSGKQLFE------TDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLEL 223
>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
Length = 857
Score = 42.0 bits (97), Expect = 0.001
Identities = 70/324 (21%), Positives = 120/324 (37%), Gaps = 70/324 (21%)
Query: 125 LTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFL 184
L +R EK+S+Y DEEL D +K ++V+ ++ ++ HF
Sbjct: 107 LEQQRHHEKKSIYNLNEDEELTHYGQSLADIEKHNDIVDSDSDAEDRGTLSAELTAAHF- 165
Query: 185 EAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIE-RERSAL 243
GGG +++ G +K K ++E +E+ + E RER A
Sbjct: 166 ---------------GGGGGLLHKKTQQEGEEREKPKSRKELIEELIAKSKQEKRERQAQ 210
Query: 244 GPNVTKITLESFLAWK--------KRKRQEKIDKLEQ------DMERRKADFKAGKALVI 289
+ ++T + WK K + E DK E+ DM R+ F+ +
Sbjct: 211 REDALELTEKLDQDWKEIQTLLSHKTPKSENRDKKEKPKPDAYDMMVRELGFE----MKA 266
Query: 290 SGREVFEFRPELVNDDDE-----EADDTRYTQGTGGDE---VDDSVSVNDIDLSLYIPRD 341
+ EL ++ E EA+ R G DE +S +D++ + +D
Sbjct: 267 QPSNRMKTEAELAKEEQEHLRKLEAERLRRMLGKDEDENVKKPKHMSADDLNDGFVLDKD 326
Query: 342 VDETGITVASLERFSTYTSDKDENKLSEASGGRAENGERSDLEEDNEREGTENGAIDAVP 401
R +Y + K++ + E + + E NE EG +G
Sbjct: 327 D----------RRLLSY----KDGKMNVEEDVQEEQSKEASDPESNEEEGDSSG------ 366
Query: 402 VDENLFTGEDLDELEEELNTLDLE 425
GED +E + + LDLE
Sbjct: 367 -------GEDTEESDSPDSHLDLE 383
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 41.2 bits (95), Expect = 0.002
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 4 KKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQS 63
KK+ + +K+ E+K+K K E K G +K+G ++++ + K ++ R+ +
Sbjct: 98 KKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERER-----KEERKREERKERERKKE 152
Query: 64 EAEK-KLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFS 122
E EK + +K+ KK+E +++ E K +K K K+ + K K +
Sbjct: 153 EREKERERKERKKRERKQVGE--KEEERKEKERKERK---------KRERNRKERKKERE 201
Query: 123 HDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPK 175
ERK E++ + R +E +KD NW E K+ G+ E+K+ K
Sbjct: 202 RKERRERKKERKKK--EERKKERQKDRQTNWRE--------KERGKRERKERK 244
Score = 33.9 bits (76), Expect = 0.29
Identities = 48/232 (20%), Positives = 91/232 (39%), Gaps = 57/232 (24%)
Query: 54 QQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQC 113
++ R++ + KK ++ ++KKE +E + + +K +G K
Sbjct: 39 REREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEK------------ 86
Query: 114 TKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKK 173
KG++ K ERK +R + ++E E+ EKK +K+ E E+K+
Sbjct: 87 -KGERKKEER----ERKKRRR----EKENKEGEEKEKRKKKEKKERGRTSKEGKERERKE 137
Query: 174 PKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLE 233
+ + E K ++++KKEE+E E +
Sbjct: 138 ERKR----------EERK--------------------------ERERKKEEREKERERK 161
Query: 234 DLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGK 285
+ +RER +G + + KKR+R K K E++ + R+ K K
Sbjct: 162 ERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERK 213
>gi|148839339 nexilin (F actin binding protein) [Homo sapiens]
Length = 675
Score = 40.4 bits (93), Expect = 0.003
Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 64/335 (19%)
Query: 12 SKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKK 71
S+KAE KT+ K KG + KF + + Q+ R Q E+ +++
Sbjct: 5 SQKAEILLSSSKPVPKTYVPKLGKGDVKDKFEAMQRAREERNQRRSRDEKQRRKEQYIRE 64
Query: 72 DDKKKELQELNELFKP---VVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLE 128
+ + QE+ E+ + K+ K PK T K +F+ ++ +
Sbjct: 65 REWNRRKQEIKEMLASDDEEDVSSKVEKAYVPK-----------LTGTVKGRFA-EMEKQ 112
Query: 129 RKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEK----------------- 171
R+ E+R + R +E+D ++ ++K++ + K+ + E
Sbjct: 113 RQEEQRKRTEEERKRRIEQDMLE---KRKIQRELAKRAEQIEDINNTGTESASEEGDDSL 169
Query: 172 -------KKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKE 224
K KT K E +E + + Y + ++ KE
Sbjct: 170 LITVVPVKSYKTSGKMKKNFEDLEKEREE--------KERIKYEEDKRIRYEEQRPSLKE 221
Query: 225 EKEDEISLEDLIERE--RSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFK 282
K + ++D IE E + +L P K+T E +R+RQE +++A+ +
Sbjct: 222 AKCLSLVMDDEIESEAKKESLSPGKLKLTFEEL----ERQRQEN--------RKKQAEEE 269
Query: 283 AGKALVISGREVFEFRPELVNDDDEEADDTRYTQG 317
A K L R E R ++VN+D+E D + +G
Sbjct: 270 ARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKG 304
Score = 29.6 bits (65), Expect = 5.5
Identities = 40/195 (20%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 4 KKQAQAGGSKKAEQKKKEKIIEDK-TFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQ 62
++Q Q K+AE++ ++++ E+K F ++ + + + K + +++
Sbjct: 255 ERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGYRPGKLKLSF 314
Query: 63 SEAEKKLKKDDKKKELQE----LNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDK 118
E E++ ++D+K+K +E + E K A++ D + Q T G K
Sbjct: 315 EEMERQRREDEKRKAEEEARRRIEEEKKAFAEARRNMVVDDDSPEMYKTISQEFLTPG-K 373
Query: 119 CKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQI 178
+ + + L++K E+ R EE K ++ EK+ E + ++ GE E+++ +T
Sbjct: 374 LEINFEELLKQKMEEEK----RRTEEERKHKLEM--EKQEFEQLRQEMGE-EEEENETFG 426
Query: 179 VCKHFLEAIENNKYG 193
+ + + E I+ + G
Sbjct: 427 LSREYEELIKLKRSG 441
>gi|5032243 makorin ring finger protein 3 [Homo sapiens]
Length = 507
Score = 39.7 bits (91), Expect = 0.005
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 95 SKGADPKSVVCAFFKQGQCTKGDKCKFSHDLT 126
S G K ++C ++ GQC +G+ C++SHDL+
Sbjct: 91 SSGIWTKQIICRYYIHGQCKEGENCRYSHDLS 122
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 39.7 bits (91), Expect = 0.005
Identities = 53/220 (24%), Positives = 84/220 (38%), Gaps = 25/220 (11%)
Query: 218 KKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERR 277
+KDK+ + + +I ED + LE ++ + EK D D+++
Sbjct: 4708 EKDKEDPDSKSDIKGEDNAIEMSEDFDGKMHDGELE-----EQEEDDEKSDSEGGDLDKH 4762
Query: 278 KADFKAGKALVISGREVFEFRPELVNDDDEEADDTRYTQ-----GTGGDEVDDSVSVNDI 332
D ++G E + L DDDEE D+ G G DE D + D
Sbjct: 4763 MGD--------LNGEEADKLDERLWGDDDEEEDEEEEDNKTEETGPGMDEEDSELVAKDD 4814
Query: 333 DLSLYIPRDVDETGITVASLERFSTYTSDKDENKLSEASGGRAENGERSDLEEDNEREGT 392
+L E + E+K++E R + D N+ +
Sbjct: 4815 NLDSGNSNKDKSQQDKKEEKEEAEADDGGQGEDKINEQIDERDYDENEVDPYHGNQEKVP 4874
Query: 393 ENGAIDAVPVDENLFT-----GEDLDELE-EELNTLDLEE 426
E A+D +P D NL + GED D E EE N L+++E
Sbjct: 4875 EPEALD-LPDDLNLDSEDKNGGEDTDNEEGEEENPLEIKE 4913
>gi|223468622 makorin ring finger protein 1 isoform 2 [Homo sapiens]
Length = 329
Score = 39.3 bits (90), Expect = 0.007
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 95 SKGADPKSVVCAFFKQGQCTKGDKCKFSHDLT 126
S G K V C +F G C +GD C++SHDL+
Sbjct: 51 SGGGWTKQVTCRYFMHGVCKEGDNCRYSHDLS 82
Score = 38.1 bits (87), Expect = 0.015
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 100 PKSVVCAFFKQGQCTKGDKCKFSHDLTLERK 130
P SVVC +F++G C GD+C++ H L+++
Sbjct: 85 PYSVVCKYFQRGYCIYGDRCRYEHSKPLKQE 115
>gi|223468620 makorin ring finger protein 1 isoform 1 [Homo sapiens]
Length = 482
Score = 39.3 bits (90), Expect = 0.007
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 95 SKGADPKSVVCAFFKQGQCTKGDKCKFSHDLT 126
S G K V C +F G C +GD C++SHDL+
Sbjct: 51 SGGGWTKQVTCRYFMHGVCKEGDNCRYSHDLS 82
Score = 38.1 bits (87), Expect = 0.015
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 100 PKSVVCAFFKQGQCTKGDKCKFSHDLTLERK 130
P SVVC +F++G C GD+C++ H L+++
Sbjct: 85 PYSVVCKYFQRGYCIYGDRCRYEHSKPLKQE 115
Score = 31.2 bits (69), Expect = 1.9
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 170 EKKKPKTQIVCKHFLEAIENNKYGWF----WVCPGGGDICMYRHALPPG 214
E+K+ K +++ K + EA+ N +F CP GG+ C Y+HA P G
Sbjct: 349 EEKEEKQKLILK-YKEAMSNKACRYFDEGRGSCPFGGN-CFYKHAYPDG 395
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 38.9 bits (89), Expect = 0.009
Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 21/288 (7%)
Query: 141 RDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPG 200
+DE+ ++ EK+ E K+H E + K + K A E+++ G
Sbjct: 101 KDEKRKEKKHARVKEKEREHERRKRHREEQDKARREWERQKRREMAREHSRRE-----RG 155
Query: 201 GGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKK 260
+C++R L K++++++ +E + + ERER A + A +
Sbjct: 156 NDGVCLFRDRLEQ-LERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHR 214
Query: 261 RKRQEKIDKLEQDMERR------KADFKAGKALVISGREVFEFRPELVNDDDEEADDTRY 314
R++ DK++ R + F+ G E E R +L++D + +D R
Sbjct: 215 TMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEER-DLLSDLQDISDSERK 273
Query: 315 TQGTGGDEVDDSVSVNDIDLSLYIPRDVDETGITVASLERFSTYTSDKDENKLS---EAS 371
T + + + + +E G T E +++E S EAS
Sbjct: 274 TSSAESSSAESGSGSEEEEEE---EEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEAS 330
Query: 372 GGRAENGERSDLEEDNEREGTENGAIDAVPVDENLFTGEDLDELEEEL 419
AE ++ ED ERE EN + VP + +E EEE+
Sbjct: 331 EQSAEEVSEEEMSEDEERE-NENHLL-VVPESRFDRDSGESEEAEEEV 376
Score = 32.7 bits (73), Expect = 0.64
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 364 ENKLSEASGGRAENGERSDLEEDNEREGTENGAIDAVPVDENLFTGEDLDELEEELNTLD 423
E K S A AE+G S+ EE+ E E E G+ +E E+ +E EEE +
Sbjct: 271 ERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEE-----EEEEEEEEEETGSN 325
Query: 424 LEE 426
EE
Sbjct: 326 SEE 328
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 38.9 bits (89), Expect = 0.009
Identities = 55/281 (19%), Positives = 122/281 (43%), Gaps = 41/281 (14%)
Query: 13 KKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKD 72
++AEQ +++K+ EDK L+ K ++++ K + Q +V Q + EKK + +
Sbjct: 549 EEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVL--------QARERVEQMKEEKKKQIE 600
Query: 73 DKKKELQELNELFKPV-VAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKC 131
K ++ E E K +A +K K A K + ++ Q + + ++ L E +
Sbjct: 601 QKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRW---LQQEEEE 657
Query: 132 EKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNK 191
+ + + EE ++ + K+L E ++ E E+++ + + + E E +
Sbjct: 658 RRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQER 717
Query: 192 YGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERERSALGPNVTKIT 251
L + +++ E+E + +L ERE++ + K
Sbjct: 718 Q------------------------LAEQERRREQERLQAERELQEREKAL---RLQKEQ 750
Query: 252 LESFLAWKKRKRQEK--IDKLEQDMERRKADFKAGKALVIS 290
L+ L KK+K +++ ++ Q+ + +KA AG + ++
Sbjct: 751 LQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALN 791
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 38.9 bits (89), Expect = 0.009
Identities = 55/281 (19%), Positives = 122/281 (43%), Gaps = 41/281 (14%)
Query: 13 KKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKD 72
++AEQ +++K+ EDK L+ K ++++ K + Q +V Q + EKK + +
Sbjct: 545 EEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVL--------QARERVEQMKEEKKKQIE 596
Query: 73 DKKKELQELNELFKPV-VAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKC 131
K ++ E E K +A +K K A K + ++ Q + + ++ L E +
Sbjct: 597 QKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRW---LQQEEEE 653
Query: 132 EKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNK 191
+ + + EE ++ + K+L E ++ E E+++ + + + E E +
Sbjct: 654 RRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQER 713
Query: 192 YGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERERSALGPNVTKIT 251
L + +++ E+E + +L ERE++ + K
Sbjct: 714 Q------------------------LAEQERRREQERLQAERELQEREKAL---RLQKEQ 746
Query: 252 LESFLAWKKRKRQEK--IDKLEQDMERRKADFKAGKALVIS 290
L+ L KK+K +++ ++ Q+ + +KA AG + ++
Sbjct: 747 LQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALN 787
>gi|125987603 cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Homo sapiens]
Length = 244
Score = 37.7 bits (86), Expect = 0.020
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 101 KSVVCAFFKQGQCTKGDKCKFSH--DLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKL 158
K+VVC + +G C KGD+C+F H D+T +C S + + ++E +D E K+
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHID--PESKI 121
Query: 159 EEVV-----NKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRH 209
++ KHG + + +++C ++L CP G C + H
Sbjct: 122 KDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGF----------CPEGPS-CKFMH 166
>gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Homo sapiens]
Length = 269
Score = 37.7 bits (86), Expect = 0.020
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 101 KSVVCAFFKQGQCTKGDKCKFSH--DLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKL 158
K+VVC + +G C KGD+C+F H D+T +C S + + ++E +D E K+
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHID--PESKI 121
Query: 159 EEVV-----NKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRH 209
++ KHG + + +++C ++L CP G C + H
Sbjct: 122 KDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGF----------CPEGPS-CKFMH 166
>gi|193788659 cleavage and polyadenylation specific factor 4-like
[Homo sapiens]
Length = 179
Score = 37.4 bits (85), Expect = 0.026
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 101 KSVVCAFFKQGQCTKGDKCKFSH--DLTLERKCEKRSVYIDARDEE 144
K VVC + +G C KGD CKF H DLT +C S + D ++E
Sbjct: 64 KMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKE 109
Score = 33.1 bits (74), Expect = 0.49
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 102 SVVCAFFKQGQCTKGDKCKFSHD 124
S VC FF +G C KG C F HD
Sbjct: 38 SAVCNFFTKGLCEKGKLCPFRHD 60
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 36.6 bits (83), Expect = 0.045
Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 30/239 (12%)
Query: 13 KKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKD 72
K++E K EK + K L NK K K + K +++ + E E ++++
Sbjct: 2128 KRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIEEE 2187
Query: 73 DK----KKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCK---FSHDL 125
+ K+ ++ E + +K S D F ++ + + K S +
Sbjct: 2188 EVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEE 2247
Query: 126 TLERKCEKRSVYIDARDEELEKDTMDNWDEKKLE-EVVNKKHGEAEKKKPKTQIVCKHFL 184
ER+ E+ + R+EE E+ + +EK++E E KK + EKKK + Q + F
Sbjct: 2248 EEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFE 2307
Query: 185 EAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIERERSAL 243
E + + + +EE+E+ SLE+ ++RE+ L
Sbjct: 2308 E----------------------KEEIMSEEETESLSDEEEEEESCSLEEEVDREKEIL 2344
Score = 29.6 bits (65), Expect = 5.5
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 216 VLKKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKID--KLEQD 273
+ KK+K E ++ + +ED + +++ L K+ LE + K++ + ++D K E+
Sbjct: 1903 IKKKEKLAETEKKLVQVEDSLAKKQEKLAQEKMKLALEKAMVQGKKRLRGELDIAKEEKA 1962
Query: 274 MERRKADFKAGKALVISGRE 293
+ K ++ G+E
Sbjct: 1963 LNLEMKRLAEEKMRLVEGKE 1982
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 36.6 bits (83), Expect = 0.045
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 37 AKQQKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISK 96
A+ Q+ +KAV Q+ Q P + + EKK K + KKK+ ++ E K +K +K
Sbjct: 464 AELQEQLKAVHEQLAALSQAPVNKPKKKKEKKEK-EKKKKDKEKEKEKHKVKAEEEKKAK 522
Query: 97 GADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDAR--DEELEKDTMDNWD 154
A P KQ Q K K + T R+ +K A EE E+ ++D
Sbjct: 523 VAPPA-------KQAQQKKAPAKKANSTTTAGRQLKKGGKQASASYDSEEEEEGLPMSYD 575
Query: 155 EKK-LEEVVNKKHGE 168
EK+ L +N+ GE
Sbjct: 576 EKRQLSLDINRLPGE 590
>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
Length = 1602
Score = 36.6 bits (83), Expect = 0.045
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 284 GKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVD 343
GK +V+ +E F+ PE D+D ++RY+ T + + I ++PRDV
Sbjct: 1001 GKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFK-KIKLWTMPISSVRFVPRDVP 1059
Query: 344 ETGITVASLERFSTYTSDKDENKLSEASGGRAENGERSDLEEDNEREGTENG 395
+ VAS+ F+ DE + RAE+ + E+++ NG
Sbjct: 1060 LPVVRVASV--FANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSNG 1109
>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
Length = 1582
Score = 36.6 bits (83), Expect = 0.045
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 284 GKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVD 343
GK +V+ +E F+ PE D+D ++RY+ T + + I ++PRDV
Sbjct: 1008 GKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFK-KIKLWTMPISSVRFVPRDVP 1066
Query: 344 ETGITVASLERFSTYTSDKDENKLSEASGGRAENGERSDLEEDNEREGTENG 395
+ VAS+ F+ DE + RAE+ + E+++ NG
Sbjct: 1067 LPVVRVASV--FANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSNG 1116
>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
Length = 1582
Score = 36.6 bits (83), Expect = 0.045
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 284 GKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYIPRDVD 343
GK +V+ +E F+ PE D+D ++RY+ T + + I ++PRDV
Sbjct: 1033 GKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFK-KIKLWTMPISSVRFVPRDVP 1091
Query: 344 ETGITVASLERFSTYTSDKDENKLSEASGGRAENGERSDLEEDNEREGTENG 395
+ VAS+ F+ DE + RAE+ + E+++ NG
Sbjct: 1092 LPVVRVASV--FANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSNG 1141
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 36.6 bits (83), Expect = 0.045
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 2 PPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQQKFIKA---------------- 45
PP+ Q GG KK ++KK +K +DK K K K++K + A
Sbjct: 798 PPRNSDQEGGGKKKKKKKDKKHKKDKKH--KKHKKHKKEKAVAAAAAAAVTPAAIAAATT 855
Query: 46 -VTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQE--LNELFKPVVAAQ 92
+ + P++ +SEAE L DD +K L+E L + K V+ Q
Sbjct: 856 TLAQEEPVAAPEPKKETESEAEDNL--DDLEKHLREKALRSMRKAQVSPQ 903
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,524,829
Number of Sequences: 37866
Number of extensions: 864925
Number of successful extensions: 5140
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 4370
Number of HSP's gapped (non-prelim): 983
length of query: 426
length of database: 18,247,518
effective HSP length: 105
effective length of query: 321
effective length of database: 14,271,588
effective search space: 4581179748
effective search space used: 4581179748
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.