Guide to the Human Genome
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Name: RWDD1 Sequence: fasta or formatted (147aa) NCBI GI: 55953127
Description:

RWD domain containing 1 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {243aa} RWD domain containing 1 isoform a
alt mRNA {147aa} RWD domain containing 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1          9           1
 C cysteine            0.0          0           0
 D aspartate          11.6         17           2
 E glutamate          17.0         25           3
 F phenylalanine       4.8          7           1
 G glycine             2.7          4           1
 H histidine           1.4          2           1
 I isoleucine          4.1          6           1
 K lysine             10.9         16           3
 L leucine             8.8         13           2
 M methionine          2.7          4           1
 N asparagine          5.4          8           2
 P proline             2.7          4           1
 Q glutamine           5.4          8           1
 R arginine            2.0          3           2
 S serine              3.4          5           1
 T threonine           4.8          7           1
 V valine              4.8          7           1
 W tryptophan          0.7          1           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RWD domain containing 1 isoform b 
RWDD1                 1.000   RWD domain containing 1 isoform b 
RWDD1                 1.000   RWD domain containing 1 isoform a 
ZC3H15                0.063   erythropoietin 4 immediate early response 
SCAPER                0.056   S-phase cyclin A-associated protein in the ER isofo...
SCAPER                0.056   S-phase cyclin A-associated protein in the ER isofo...
KIF16B                0.052   kinesin-like motor protein C20orf23 
CCAR1                 0.052   cell-cycle and apoptosis regulatory protein 1 
BAZ1A                 0.052   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.052   bromodomain adjacent to zinc finger domain, 1A isofo...
LOC100133692          0.048   PREDICTED: similar to cell division cycle 2-like 1 ...
KIF21A                0.048   kinesin family member 21A 
CDC2L1                0.048   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.045   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.045   cell division cycle 2-like 2 isoform 1 
LOC100294398          0.045   PREDICTED: similar to PITSLRE protein kinase beta S...
CDC2L1                0.045   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.045   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RGAG4                 0.045   retrotransposon gag domain containing 4 
SEPT11                0.045   septin 11 
LOC283685             0.045   PREDICTED: golgi autoantigen, golgin subfamily a-li...
RTF1                  0.045   Paf1/RNA polymerase II complex component 
SEPT6                 0.041   septin 6 isoform B 
SEPT6                 0.041   septin 6 isoform D 
SEPT6                 0.041   septin 6 isoform A 
PTMS                  0.041   parathymosin 
HMG20A                0.041   high-mobility group 20A 
SEPT6                 0.041   septin 6 isoform A 
CHAF1A                0.041   chromatin assembly factor 1, subunit A (p150) 
ARID4B                0.041   AT rich interactive domain 4B isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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