Guide to the Human Genome
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Name: RWDD1 Sequence: fasta or formatted (243aa) NCBI GI: 55953123
Description:

RWD domain containing 1 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {147aa} RWD domain containing 1 isoform b
alt prot {147aa} RWD domain containing 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         14           1
 C cysteine            0.0          0           0
 D aspartate           9.9         24           2
 E glutamate          16.9         41           3
 F phenylalanine       4.5         11           1
 G glycine             2.9          7           1
 H histidine           0.8          2           1
 I isoleucine          4.1         10           1
 K lysine              7.8         19           3
 L leucine             9.9         24           2
 M methionine          2.1          5           1
 N asparagine          5.8         14           2
 P proline             3.7          9           2
 Q glutamine           4.9         12           1
 R arginine            1.6          4           2
 S serine              5.3         13           1
 T threonine           6.6         16           2
 V valine              4.5         11           1
 W tryptophan          0.4          1           1
 Y tyrosine            2.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RWD domain containing 1 isoform a 
RWDD1                 0.589   RWD domain containing 1 isoform b 
RWDD1                 0.589   RWD domain containing 1 isoform b 
EIF2AK4               0.070   eukaryotic translation initiation factor 2 alpha kin...
RNF25                 0.053   ring finger protein 25 
CHAF1A                0.050   chromatin assembly factor 1, subunit A (p150) 
RWDD4A                0.048   RWD domain containing 4A 
SCAPER                0.042   S-phase cyclin A-associated protein in the ER isofo...
SCAPER                0.042   S-phase cyclin A-associated protein in the ER isofo...
ZC3H15                0.037   erythropoietin 4 immediate early response 
IMPACT                0.033   Impact homolog 
KIF16B                0.031   kinesin-like motor protein C20orf23 
CCAR1                 0.031   cell-cycle and apoptosis regulatory protein 1 
BAZ1A                 0.031   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.031   bromodomain adjacent to zinc finger domain, 1A isofo...
LOC100133692          0.028   PREDICTED: similar to cell division cycle 2-like 1 ...
SYNE1                 0.028   spectrin repeat containing, nuclear envelope 1 isofo...
KIF21A                0.028   kinesin family member 21A 
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.026   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.026   cell division cycle 2-like 2 isoform 1 
LOC100294398          0.026   PREDICTED: similar to PITSLRE protein kinase beta S...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.026   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RGAG4                 0.026   retrotransposon gag domain containing 4 
SEPT11                0.026   septin 11 
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
SYNE1                 0.026   spectrin repeat containing, nuclear envelope 1 isof...
HIRIP3                0.026   HIRA interacting protein 3 
RTF1                  0.026   Paf1/RNA polymerase II complex component 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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