Guide to the Human Genome
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Name: KIAA1462 Sequence: fasta or formatted (1359aa) NCBI GI: 148806881
Description:

hypothetical protein LOC57608

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         86           2
 C cysteine            1.4         19           1
 D aspartate           5.1         69           2
 E glutamate           7.9        108           4
 F phenylalanine       2.6         35           2
 G glycine             8.2        112           3
 H histidine           2.7         37           1
 I isoleucine          1.6         22           1
 K lysine              4.8         65           3
 L leucine             6.8         92           2
 M methionine          1.5         20           1
 N asparagine          2.6         36           2
 P proline            10.8        147           3
 Q glutamine           5.9         80           3
 R arginine            7.7        105           3
 S serine             13.2        179          12
 T threonine           3.8         51           2
 V valine              4.5         61           2
 W tryptophan          1.2         16           1
 Y tyrosine            1.4         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57608 
SRRM2                 0.018   splicing coactivator subunit SRm300 
RP1L1                 0.009   retinitis pigmentosa 1-like 1 
SETD1A                0.009   SET domain containing 1A 
TACC2                 0.008   transforming, acidic coiled-coil containing protein...
LOC100129129          0.008   PREDICTED: hypothetical protein 
LOC388553             0.007   PREDICTED: similar to hCG1645909 
LOC388553             0.007   PREDICTED: similar to hCG1645909 
LOC388553             0.007   PREDICTED: similar to hCG1645909 
GPATCH8               0.007   G patch domain containing 8 
MAGEC1                0.007   melanoma antigen family C, 1 
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
TNS1                  0.007   tensin 
MLLT1                 0.007   myeloid/lymphoid or mixed-lineage leukemia (trithora...
RBM33                 0.007   RNA binding motif protein 33 
KIAA1522              0.007   hypothetical protein LOC57648 
SF1                   0.007   splicing factor 1 isoform 1 
SH3BP1                0.007   SH3-domain binding protein 1 
NOLC1                 0.006   nucleolar and coiled-body phosphoprotein 1 
BRD4                  0.006   bromodomain-containing protein 4 isoform long 
TNRC18                0.006   trinucleotide repeat containing 18 
ATXN2L                0.006   ataxin 2 related protein isoform B 
ATXN2L                0.006   ataxin 2 related protein isoform C 
ATXN2L                0.006   ataxin 2 related protein isoform A 
WIPF1                 0.006   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.006   WAS/WASL interacting protein family, member 1 
MED1                  0.006   mediator complex subunit 1 
SF1                   0.006   splicing factor 1 isoform 2 
KIAA1949              0.006   phostensin 
KIAA1949              0.006   phostensin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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