Search of human proteins with 239751611

Search of human proteins with 239751611

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751611 PREDICTED: hypothetical protein XP_002347929 [Homo
sapiens]
         (152 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757105 PREDICTED: hypothetical protein [Homo sapiens]           319   7e-88
gi|239751611 PREDICTED: hypothetical protein XP_002347929 [Homo ...   319   7e-88
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  37   0.006
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]                37   0.006
gi|7657385 CCR4-NOT transcription complex, subunit 2 [Homo sapiens]    35   0.019
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ...    34   0.055
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]                     34   0.055
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p...    33   0.094
gi|239756902 PREDICTED: hypothetical protein [Homo sapiens]            33   0.12 
gi|239751398 PREDICTED: hypothetical protein XP_002347837 [Homo ...    33   0.12 
gi|239745907 PREDICTED: hypothetical protein XP_002343614 [Homo ...    33   0.12 
gi|239756595 PREDICTED: hypothetical protein [Homo sapiens]            32   0.16 
gi|239740990 PREDICTED: hypothetical protein [Homo sapiens]            32   0.16 
gi|24308207 leucine rich repeat containing 47 [Homo sapiens]           32   0.16 
gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo ...    32   0.21 
gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo ...    32   0.21 
gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]            32   0.27 
gi|239755873 PREDICTED: hypothetical protein [Homo sapiens]            31   0.36 
gi|239750345 PREDICTED: hypothetical protein XP_002347375 [Homo ...    31   0.36 
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]            31   0.36 
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ...    31   0.36 
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    31   0.36 
gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]            31   0.46 
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]            31   0.46 
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]                       30   0.61 
gi|16975496 cortactin binding protein 2 [Homo sapiens]                 30   0.61 
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             30   0.79 
gi|239746628 PREDICTED: hypothetical protein XP_002344230 [Homo ...    30   0.79 
gi|55956910 meningioma  1 [Homo sapiens]                               30   0.79 
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote...    30   0.79 

>gi|239757105 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 152

 Score =  319 bits (817), Expect = 7e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MQSLSPLRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLAL 60
           MQSLSPLRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLAL
Sbjct: 1   MQSLSPLRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLAL 60

Query: 61  SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120
           SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR
Sbjct: 61  SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120

Query: 121 PCTMSTGNAKSETSPDSAHLPARLRRHRKCKV 152
           PCTMSTGNAKSETSPDSAHLPARLRRHRKCKV
Sbjct: 121 PCTMSTGNAKSETSPDSAHLPARLRRHRKCKV 152


>gi|239751611 PREDICTED: hypothetical protein XP_002347929 [Homo
           sapiens]
          Length = 152

 Score =  319 bits (817), Expect = 7e-88
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MQSLSPLRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLAL 60
           MQSLSPLRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLAL
Sbjct: 1   MQSLSPLRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLAL 60

Query: 61  SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120
           SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR
Sbjct: 61  SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120

Query: 121 PCTMSTGNAKSETSPDSAHLPARLRRHRKCKV 152
           PCTMSTGNAKSETSPDSAHLPARLRRHRKCKV
Sbjct: 121 PCTMSTGNAKSETSPDSAHLPARLRRHRKCKV 152


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 74  CTPSRPAPCAPE-MQSPRPPRTLHTFR---PGSVGTGNAKSEPLRALHTFRPCTMSTGNA 129
           C P   APCAP    S RPPR     R    G+ G G A +EP  A   F+     T + 
Sbjct: 477 CAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDT 536

Query: 130 KSETSPDSAHLPA 142
              +S    H P+
Sbjct: 537 NGYSSGGGGHSPS 549


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 74  CTPSRPAPCAPE-MQSPRPPRTLHTFR---PGSVGTGNAKSEPLRALHTFRPCTMSTGNA 129
           C P   APCAP    S RPPR     R    G+ G G A +EP  A   F+     T + 
Sbjct: 74  CAPCASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDT 133

Query: 130 KSETSPDSAHLPA 142
              +S    H P+
Sbjct: 134 NGYSSGGGGHSPS 146


>gi|7657385 CCR4-NOT transcription complex, subunit 2 [Homo sapiens]
          Length = 540

 Score = 35.4 bits (80), Expect = 0.019
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 28/149 (18%)

Query: 11  HTFPPCAIGTGNAKSEPSPGSAHLP-TLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLS 69
           H  P   + T +  + PSP    LP    ++    +VG   G+  PS          S+S
Sbjct: 109 HVTPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQ--GIGIPS-------RTNSMS 159

Query: 70  LSGLCTPSRPAP---CAPEMQSPRPPRTLHTF------RPGSVGTGNAKSEPLRALHTFR 120
            SGL +P+R +P   C P+ Q  R P T+++       R  + G  N+ S  +       
Sbjct: 160 SSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNI------- 212

Query: 121 PCTMSTGNAKSETSPDSAHLPARLRRHRK 149
                T  +++ T  D +  PA   R+R+
Sbjct: 213 --FNGTDGSENVTGLDLSDFPALADRNRR 239


>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
            sapiens]
          Length = 2542

 Score = 33.9 bits (76), Expect = 0.055
 Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 11/132 (8%)

Query: 12   TFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGD--LSGLCTPSGLALSALEMQSLS 69
            TF P +       S+     + +P      +K    D  ++ LCTPS  A       S S
Sbjct: 2002 TFLPASTSQAQLSSQKMESFSAVPP---TKEKVSTQDQPMANLCTPSSTA------NSCS 2052

Query: 70   LSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFRPCTMSTGNA 129
             S   TP  P        +P    T    +P SV   +  S P  +     P T+++   
Sbjct: 2053 SSASNTPGAPETHPSSSPTPTSSNTQEEAQPSSVSDLSPMSMPFASNSEPAPLTLTSPRM 2112

Query: 130  KSETSPDSAHLP 141
             +  + D+++LP
Sbjct: 2113 VAADNQDTSNLP 2124


>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
          Length = 2617

 Score = 33.9 bits (76), Expect = 0.055
 Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 11/132 (8%)

Query: 12   TFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGD--LSGLCTPSGLALSALEMQSLS 69
            TF P +       S+     + +P      +K    D  ++ LCTPS  A       S S
Sbjct: 2002 TFLPASTSQAQLSSQKMESFSAVPP---TKEKVSTQDQPMANLCTPSSTA------NSCS 2052

Query: 70   LSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFRPCTMSTGNA 129
             S   TP  P        +P    T    +P SV   +  S P  +     P T+++   
Sbjct: 2053 SSASNTPGAPETHPSSSPTPTSSNTQEEAQPSSVSDLSPMSMPFASNSEPAPLTLTSPRM 2112

Query: 130  KSETSPDSAHLP 141
             +  + D+++LP
Sbjct: 2113 VAADNQDTSNLP 2124


>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 4 [Homo sapiens]
          Length = 1203

 Score = 33.1 bits (74), Expect = 0.094
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 7   LRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQ 66
           L+ L +  P A+G+ +  S PS       +  H+ Q      L+G   P+GL+       
Sbjct: 826 LKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQ------LAGFSAPAGLSPLLPSSS 879

Query: 67  SLSLSGLC-TPSRPAPCA 83
           S    G C +PS P P A
Sbjct: 880 SSPPPGACGSPSAPTPSA 897


>gi|239756902 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 121

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 77  SRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120
           +RPAP  P   +P P R   +  PG  G+ N ++ P   L  +R
Sbjct: 78  ARPAPAPPPSPAPAPRRVESSRLPGCFGSENKRAAPENGLQAWR 121


>gi|239751398 PREDICTED: hypothetical protein XP_002347837 [Homo
           sapiens]
          Length = 121

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 77  SRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120
           +RPAP  P   +P P R   +  PG  G+ N ++ P   L  +R
Sbjct: 78  ARPAPAPPPSPAPAPRRVESSRLPGCFGSENKRAAPENGLQAWR 121


>gi|239745907 PREDICTED: hypothetical protein XP_002343614 [Homo
           sapiens]
          Length = 121

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 77  SRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120
           +RPAP  P   +P P R   +  PG  G+ N ++ P   L  +R
Sbjct: 78  ARPAPAPPPSPAPAPRRVESSRLPGCFGSENKRAAPENGLQAWR 121


>gi|239756595 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score = 32.3 bits (72), Expect = 0.16
 Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 12/102 (11%)

Query: 12  TFPPCAIGTGNAKSEPSP--GSAHLPTLHHVHQKCKVGD-LSGLCTPSGLALSALEMQSL 68
           T P C +  G A+S P    G   L   H  H        L G C P   ALS       
Sbjct: 54  TCPVCVVRMGLAESWPPTLGGGEALRGAHEFHAVISTSSYLPGACPP---ALSG------ 104

Query: 69  SLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKS 110
           S S     S P PC P   +   PRT  +  P +     A+S
Sbjct: 105 SASAAFGRSEPGPCRPSEGASPWPRTRSSRSPQATALSRARS 146


>gi|239740990 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 207

 Score = 32.3 bits (72), Expect = 0.16
 Identities = 29/112 (25%), Positives = 39/112 (34%), Gaps = 16/112 (14%)

Query: 55  PSGLALSALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLR 114
           P+  +L  L+ Q L L G   PS   P A  +      + LH       G     S+P  
Sbjct: 59  PAHASLQPLQAQLLHLGGPSRPSLCLPSASTVPKSASQQILHAQHLPHCGPPKPSSQPFS 118

Query: 115 ALHTFRPC--TMSTGNAKSETS--------------PDSAHLPARLRRHRKC 150
           + +T   C    S G A +                 PDS   P+ L R R C
Sbjct: 119 SFYTPSSCHPVASLGQAHASQGPFQAQLLSHGNLPWPDSCLSPSSLDRPRSC 170


>gi|24308207 leucine rich repeat containing 47 [Homo sapiens]
          Length = 583

 Score = 32.3 bits (72), Expect = 0.16
 Identities = 39/132 (29%), Positives = 52/132 (39%), Gaps = 40/132 (30%)

Query: 9   ALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSL 68
           AL   PP   G G   +EP PG   L +L+    + +         P+ LA  A  +QSL
Sbjct: 110 ALEALPP---GQGLGPAEP-PGLPQLQSLNLSGNRLRE-------LPADLARCAPRLQSL 158

Query: 69  SLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFRPCTMSTGN 128
           +L+G C  S PA                 FRPG++        PL +         +  N
Sbjct: 159 NLTGNCLDSFPA---------------ELFRPGAL--------PLLSE------LAAADN 189

Query: 129 AKSETSPDSAHL 140
              E SPD AHL
Sbjct: 190 CLRELSPDIAHL 201


>gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo
           sapiens]
          Length = 171

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 19  GTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLCTPSR 78
           GT       + G A L   HHV          GLC     +   L++Q LS +GL     
Sbjct: 52  GTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLA 111

Query: 79  PAPCAPEMQSPRPPRTLHTFRPGSV 103
            A C  E+  PRP  +L TF  G V
Sbjct: 112 AAHCCQEV--PRP--SLLTFPKGQV 132


>gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo
           sapiens]
          Length = 171

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 19  GTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLCTPSR 78
           GT       + G A L   HHV          GLC     +   L++Q LS +GL     
Sbjct: 52  GTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLA 111

Query: 79  PAPCAPEMQSPRPPRTLHTFRPGSV 103
            A C  E+  PRP  +L TF  G V
Sbjct: 112 AAHCCQEV--PRP--SLLTFPKGQV 132


>gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]
          Length = 500

 Score = 31.6 bits (70), Expect = 0.27
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 7/125 (5%)

Query: 17  AIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTP-------SGLALSALEMQSLS 69
           A  TG    +P+PG    P      Q        G+ T        SG   S      L 
Sbjct: 250 ASSTGKEDKQPAPGPVEKPPREPARQLRNPPTTIGMMTLKAAFKTLSGAQDSEAAFAKLD 309

Query: 70  LSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFRPCTMSTGNA 129
              L  P++  P +P +++ RP +  +     + G G ++ +P     T     +   + 
Sbjct: 310 QKDLVLPTQALPASPALKNKRPRKDENESSAPADGEGGSELQPKNKRMTISRLVLEEDSQ 369

Query: 130 KSETS 134
            +E S
Sbjct: 370 STEPS 374


>gi|239755873 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 577

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 61  SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120
           + L  Q L +SGL  P R AP A  +   RP  T  +  P    +   +S    +L + R
Sbjct: 89  AGLHAQQLPISGLAVPGRSAP-AVALACSRPFSTPTSCSPCPTRSSGVRSSTSTSLSS-R 146

Query: 121 PCTMSTGNAKSETSPDSAHLP--ARLRRH 147
              + T ++ + ++  S H P   RLR H
Sbjct: 147 VRAVKTKSSSTHSTWSSNHYPGGCRLRAH 175


>gi|239750345 PREDICTED: hypothetical protein XP_002347375 [Homo
           sapiens]
          Length = 233

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 61  SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFR 120
           + L  Q L +SGL  P R AP A  +   RP  T  +  P    +   +S    +L + R
Sbjct: 89  AGLHAQQLPISGLAVPGRSAP-AVALACSRPFSTPTSCSPCPTRSSGVRSSTSTSLSS-R 146

Query: 121 PCTMSTGNAKSETSPDSAHLP--ARLRRH 147
              + T ++ + ++  S H P   RLR H
Sbjct: 147 VRAVKTKSSSTHSTWSSNHYPGGCRLRAH 175


>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 179

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 75  TPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHT 118
           +P+RPAP A    SP P R    F P S  + +++S P RA  T
Sbjct: 37  SPARPAPSA----SPSPSRAAGPFLPPSHASTSSRSPPPRARRT 76


>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
           sapiens]
          Length = 179

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 75  TPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHT 118
           +P+RPAP A    SP P R    F P S  + +++S P RA  T
Sbjct: 37  SPARPAPSA----SPSPSRAAGPFLPPSHASTSSRSPPPRARRT 76


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 18/50 (36%), Positives = 21/50 (42%)

Query: 68  LSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALH 117
           L+   L   + P PCAP    P PP T     P SV +  A    L  LH
Sbjct: 207 LTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLH 256


>gi|239753043 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 451

 Score = 30.8 bits (68), Expect = 0.46
 Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 11/108 (10%)

Query: 15  PCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLC 74
           P     G A S P P +   P L     + + G + G     GLA +A  M  LSLS LC
Sbjct: 28  PSGAVAGGAPS-PLPATRSTPPLPC---RARPGGVVGWGPGGGLARAAPAMNGLSLSELC 83

Query: 75  TPSRPAPCAPEMQSP---RPPRTLHTF----RPGSVGTGNAKSEPLRA 115
                 PC   + +     PP   ++      PG  G G A    LRA
Sbjct: 84  CLFCCPPCPGRIAAKLAFLPPEATYSLVTEPEPGPGGAGAAPLGTLRA 131


>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
          Length = 1352

 Score = 30.8 bits (68), Expect = 0.46
 Identities = 31/107 (28%), Positives = 34/107 (31%), Gaps = 29/107 (27%)

Query: 15  PCAIGTGNAKSEPSPGSAH------------LPTLHHVHQKCKVGDLSGL--CTPSGLAL 60
           P A G     S  SP SA             L TL H+  +    D  GL  C P G A 
Sbjct: 41  PGASGPAAPSSPSSPSSARSVGSFMSRVLKTLSTLSHLSSEGAAPDRGGLRSCFPPGPAA 100

Query: 61  SALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGN 107
           +                 P PC P   SP PP       PG  G  N
Sbjct: 101 APT---------------PPPCPPPPASPAPPACAAEPVPGVAGLRN 132



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 80   APCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFRPCTMSTGNAKSETSPDSAH 139
            AP  P   + +P  T     P S GT    SEP ++L   RP   S  ++ S TSP S+ 
Sbjct: 1008 APSHPGSLAKKPESTTKR-SPSSKGT----SEPEKSLRKGRPALASQESSLSSTSP-SSP 1061

Query: 140  LPARL 144
            LP ++
Sbjct: 1062 LPVKV 1066


>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
          Length = 1426

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 34/145 (23%), Positives = 47/145 (32%), Gaps = 15/145 (10%)

Query: 3    SLSPLRALHTFPPCAIGTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSA 62
            S  P + L  FP   +        P PG +H+            G +       GLAL  
Sbjct: 1242 SEKPSQTLQYFPRGEVPGRKQPQGPGPGFSHMQ-----------GMMGEQAPRMGLALPG 1290

Query: 63   LEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFRPC 122
            +         + TP  P   AP M    P R     + G +G  +    P ++    +P 
Sbjct: 1291 MG----GPGPVGTPDIPLGTAPSMPGHNPMRPPAFLQQGMMGPHHRMMSPAQSTMPGQPT 1346

Query: 123  TMSTGNAKSETSPDSAHLPARLRRH 147
             MS   A     P     PA L  H
Sbjct: 1347 LMSNPAAAVGMIPGKDRGPAGLYTH 1371



 Score = 29.3 bits (64), Expect = 1.4
 Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 27/111 (24%)

Query: 9   ALHTFPPCAIGTGNAKSE--------PSPGSAHL--PTLHHVHQKC---KVGDLSGLCTP 55
           +L+T PP   G G    +         SPG   L  PT+H V         G+L    TP
Sbjct: 830 SLNTAPPVQRGLGRKPLDISVAGSQVHSPGINPLKSPTMHQVQSPMLGSPSGNLKSPQTP 889

Query: 56  SGLA------LSALEMQSLSLSG--------LCTPSRPAPCAPEMQSPRPP 92
           S LA       +A  ++S  + G        L +PS PAP      SP+PP
Sbjct: 890 SQLAGMLAGPAAAASIKSPPVLGSAAASPVHLKSPSLPAPSPGWTSSPKPP 940


>gi|16975496 cortactin binding protein 2 [Homo sapiens]
          Length = 1663

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 40  VHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLCTPSRPAPCAPEMQSPRPPRTLHTFR 99
           + ++   GDL G   P+    SA +++    S   TP  P    P + S   P T  T  
Sbjct: 356 IDRQASYGDLIGASVPAFPPPSANKIEENGPSTGSTPD-PTSSTPPLPSNAAPPTAQT-- 412

Query: 100 PGSVGTGNAKSEPLRALHTFRPC 122
           PG +   N+++ P+ +LH+  PC
Sbjct: 413 PG-IAPQNSQAPPMHSLHS--PC 432


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 67   SLSLSGLCTPSRPAPCAPEMQSPRPPRT-LHTFRPGSVGTGNAKSEPLR----ALHTFRP 121
            SLS     TPS          SP PP+  L T++P  V    A+++P R     LH +RP
Sbjct: 1960 SLSSHRYETPSDAIEVISPASSPAPPQEKLQTYQPEVVKANQAENDPTRQYEGPLHHYRP 2019


>gi|239746628 PREDICTED: hypothetical protein XP_002344230 [Homo
           sapiens]
          Length = 227

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 72  GLCTPSRPAPCAPEM----QSPRPPRTLHTFRPGSVGTGNAKSEPLR 114
           GL TP    PC P      +S  PP T+   R   +G G A++  +R
Sbjct: 25  GLGTPYHSHPCKPRQVPVSESQPPPHTMQVGRWAGLGVGQAEATSVR 71


>gi|55956910 meningioma  1 [Homo sapiens]
          Length = 1320

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 71  SGLCTPSRPAPCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLR 114
           SG  + + PAPC P  QSP    + H   P S G+ +   EP R
Sbjct: 179 SGASSHAVPAPCLPLDQSPNRAASFHGL-PSSSGSDSHSLEPRR 221


>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
           1 [Homo sapiens]
          Length = 828

 Score = 30.0 bits (66), Expect = 0.79
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 81  PCAPEMQSPRPPRTLHTFRPGSVGTGNAKSEPLRALHTFRPCTMSTGNAKSETSPDSAHL 140
           P  P M+SP+  R   T  P  +   N  + P R   T  P T+  GN +S T      L
Sbjct: 229 PINPSMESPKLTRPFPTGTPPPLPPKNVPATPPR---TGSPLTIGPGNDQSATEVKIEKL 285

Query: 141 PA 142
           P+
Sbjct: 286 PS 287



 Score = 28.5 bits (62), Expect = 2.3
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 13/84 (15%)

Query: 71  SGLCTPSRPA----PCAPEMQSPRPPR--TLHTFRPGSVGTGNAKSEPLRALHTFRPCTM 124
           SG  +P+RPA    PC      P PPR  +     PG  G G+        +H+  P  +
Sbjct: 438 SGASSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPPIHSSSPPPI 497

Query: 125 -------STGNAKSETSPDSAHLP 141
                  ST +  S  S  +A  P
Sbjct: 498 APLARAESTSSISSTNSLSAATTP 521


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.130    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,152,331
Number of Sequences: 37866
Number of extensions: 441337
Number of successful extensions: 2566
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 2337
Number of HSP's gapped (non-prelim): 319
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.