BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239751067 PREDICTED: hypothetical protein XP_002347693 [Homo sapiens] (132 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239751067 PREDICTED: hypothetical protein XP_002347693 [Homo ... 276 3e-75 gi|214831364 zinc finger protein 771 [Homo sapiens] 97 5e-21 gi|214831336 zinc finger protein 771 [Homo sapiens] 97 5e-21 gi|87298939 hypothetical protein LOC131831 [Homo sapiens] 47 6e-06 gi|239756568 PREDICTED: similar to BCL2-associated transcription... 40 7e-04 gi|206597556 kelch domain containing 7B [Homo sapiens] 40 7e-04 gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 39 0.001 gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 39 0.002 gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 39 0.002 gi|31543392 peroxisome proliferator-activated receptor gamma, co... 38 0.003 gi|157266334 tubby like protein 1 [Homo sapiens] 38 0.003 gi|55750053 atrophin-1 [Homo sapiens] 37 0.005 gi|55750041 atrophin-1 [Homo sapiens] 37 0.005 gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 37 0.006 gi|116235474 LKB1 interacting protein [Homo sapiens] 37 0.006 gi|169218320 PREDICTED: similar to BCL2-associated transcription... 36 0.010 gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 36 0.010 gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 36 0.010 gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 36 0.010 gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 36 0.010 gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 36 0.010 gi|116268091 PHD finger protein 23 [Homo sapiens] 35 0.017 gi|58761548 tau tubulin kinase 1 [Homo sapiens] 35 0.017 gi|19924103 synapsin II isoform IIa [Homo sapiens] 35 0.017 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.017 gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 35 0.022 gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 35 0.022 gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 35 0.022 gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.029 gi|91208420 bassoon protein [Homo sapiens] 34 0.029 >gi|239751067 PREDICTED: hypothetical protein XP_002347693 [Homo sapiens] Length = 132 Score = 276 bits (707), Expect = 3e-75 Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MATAVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFT 60 MATAVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFT Sbjct: 1 MATAVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFT 60 Query: 61 PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK 120 PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK Sbjct: 61 PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK 120 Query: 121 IPMDNKEEAECP 132 IPMDNKEEAECP Sbjct: 121 IPMDNKEEAECP 132 >gi|214831364 zinc finger protein 771 [Homo sapiens] Length = 317 Score = 96.7 bits (239), Expect = 5e-21 Identities = 50/55 (90%), Positives = 50/55 (90%), Gaps = 3/55 (5%) Query: 81 MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE---EAECP 132 MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE EA P Sbjct: 1 MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEVPGEAPAP 55 >gi|214831336 zinc finger protein 771 [Homo sapiens] Length = 317 Score = 96.7 bits (239), Expect = 5e-21 Identities = 50/55 (90%), Positives = 50/55 (90%), Gaps = 3/55 (5%) Query: 81 MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE---EAECP 132 MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE EA P Sbjct: 1 MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEVPGEAPAP 55 >gi|87298939 hypothetical protein LOC131831 [Homo sapiens] Length = 663 Score = 46.6 bits (109), Expect = 6e-06 Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%) Query: 69 RRPAG---PGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDN 125 R P+G PGK+D K E+ EEEEEEE++EE + + EE+ EE+ EVV+ ++ + Sbjct: 5 RSPSGFGDPGKKDQKESEEELEEEEEEEEVEEEEEEVEEEEEEVEEEEEEVVEEEL-VGE 63 Query: 126 KEEAECP 132 ++E E P Sbjct: 64 EQELEAP 70 >gi|239756568 PREDICTED: similar to BCL2-associated transcription factor 1 [Homo sapiens] Length = 869 Score = 39.7 bits (91), Expect = 7e-04 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 3/127 (2%) Query: 6 GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64 GGR G P W R R P G+ +R P S + + R R S +PR + Sbjct: 83 GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 140 Query: 65 RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMD 124 S P + +++ ++ E E+QEE L K +E+ + I Sbjct: 141 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGELQEESPLKSKSQEEPKDTFEHDSSESIDEF 200 Query: 125 NKEEAEC 131 NK A C Sbjct: 201 NKSSATC 207 >gi|206597556 kelch domain containing 7B [Homo sapiens] Length = 594 Score = 39.7 bits (91), Expect = 7e-04 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 16/100 (16%) Query: 10 PTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISR 69 P P A+ PA+RPPGP +S S R+ RC P + + Sbjct: 96 PQAAMPRGPAQPPAQRPPGPAAS-------SSARRSQPVPQLRKRSRCEIAPSSEQEV-- 146 Query: 70 RPAGPGKQDTKMPGE-------QQAEEEEEEEMQEEMVLL 102 RPA G + PGE A E++EE ++ MV L Sbjct: 147 RPAASGDPQGEAPGEGGSPAGRSGALTEKQEEARKLMVFL 186 >gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] Length = 1020 Score = 38.9 bits (89), Expect = 0.001 Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 18/141 (12%) Query: 8 RQPTGLEPAWKARTPARR----PP---GPGKPDTRDPFYASGNESFGCTAQREGKRCSF- 59 + P ++ KA++PA+ PP P K + + P E A+ E K + Sbjct: 539 KSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598 Query: 60 -TPRKARRISRRPA-------GPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGE 111 +P KA+ + A P K++ K P E ++ E+ + +EE K + E E Sbjct: 599 KSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKE 658 Query: 112 EKYEVVKLKIPMDNKEEAECP 132 E K K P+ K EA+ P Sbjct: 659 EAKSPEKAKSPV--KAEAKSP 677 Score = 34.7 bits (78), Expect = 0.022 Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 20/135 (14%) Query: 18 KARTPAR-----RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPA 72 +A++PA + P K + + P A E + E K + + ++ PA Sbjct: 571 EAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPA 630 Query: 73 ---------GPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKL---- 119 P K++ K P + ++ E+EE + E+ VK E E+ VK Sbjct: 631 EVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKS 690 Query: 120 --KIPMDNKEEAECP 132 K KEEA+ P Sbjct: 691 PEKAKSPVKEEAKSP 705 Score = 32.7 bits (73), Expect = 0.085 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 35/133 (26%) Query: 4 AVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRK 63 A GG + T PA +A +P + P K + + P A Sbjct: 494 AEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKS--------------------- 532 Query: 64 ARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIP- 122 P K++ K P E ++ E+ + +EE + + E EE ++K P Sbjct: 533 ----------PEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPE 582 Query: 123 ---MDNKEEAECP 132 KEEA+ P Sbjct: 583 KAKSPAKEEAKSP 595 Score = 29.6 bits (65), Expect = 0.72 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 11/123 (8%) Query: 18 KARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKAR----RISRRPAG 73 +A+TP + P K + + P A E + + + +AR + + Sbjct: 729 EAKTP-EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKS 787 Query: 74 PGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEG----EEKYEVVKLKIPMDNKEEA 129 P K++ K P + ++ +E+ + E+ + K EE + EEK + VK+K P EE Sbjct: 788 PVKEEVKSPEKAKSPLKEDAKAPEKEI--PKKEEVKSPVKEEEKPQEVKVKEPPKKAEEE 845 Query: 130 ECP 132 + P Sbjct: 846 KAP 848 Score = 26.6 bits (57), Expect = 6.1 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Query: 84 EQQAEEEEEEEMQEEMVLLVKGEEDE---GEEKYEVVKLKIPMDNKEEAECP 132 E+ EEEE+E +EE GEE+E GEE+ + + ++EA+ P Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSP 519 Score = 26.2 bits (56), Expect = 8.0 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 20/124 (16%) Query: 18 KARTPAR-RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAGPGK 76 KA++P + P K + A E + E K +P KA+ P K Sbjct: 665 KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAK----SPEKAK-------SPVK 713 Query: 77 QDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGE-----EKYEVVKLKIP---MDNKEE 128 ++ K P + ++ +EE + E+ VK E E EK + + +K P KEE Sbjct: 714 EEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEE 773 Query: 129 AECP 132 A P Sbjct: 774 ARSP 777 >gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] Length = 1312 Score = 38.5 bits (88), Expect = 0.002 Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 16/103 (15%) Query: 10 PTGLEPAWKARTPARRPPGPGKP--DTRDPFYASGNESFGCTAQREGKRCSFTPRKARRI 67 P+ P+ P PP P P D DPF+ + +E++ E K F P + Sbjct: 201 PSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPT-DEAYSPPPAPEQKYDPFEPTGSNPS 259 Query: 68 SRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEG 110 S AG T P E++ EEEEEEE +E+ EE+EG Sbjct: 260 SS--AG-----TPSPEEEEEEEEEEEEEEED------EEEEEG 289 Score = 30.8 bits (68), Expect = 0.32 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 6/85 (7%) Query: 14 EPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAG 73 E +W A + P P P A +S + + SF P +A + G Sbjct: 961 ETSWSGEERAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGG 1020 Query: 74 PGKQDTKMPGEQQAEEEEEEEMQEE 98 ++ E++ EEEEEEE +EE Sbjct: 1021 AEEE------EEEEEEEEEEEEEEE 1039 >gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo sapiens] Length = 309 Score = 38.5 bits (88), Expect = 0.002 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Query: 7 GRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARR 66 GR+P G P R PP PGKP+ R P GN+S G R GK P+ + Sbjct: 38 GRRPQG------GNQPQRTPPPPGKPEGRPP--QGGNQSQG-PPPRPGKPEGPPPQGGNQ 88 Query: 67 ISRRPAGPGKQDTKMP 82 P PGK + + P Sbjct: 89 SQGPPPRPGKPEGQPP 104 >gi|31543392 peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Homo sapiens] Length = 1023 Score = 37.7 bits (86), Expect = 0.003 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Query: 15 PAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQRE--GKRCSFTPRK--ARRISRR 70 P + + TP RP P K P S E A + G R S P + +R RR Sbjct: 364 PVYASLTPRSRPRPP-KDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREVRR 422 Query: 71 PAGPGKQDTKMPGEQQAEEEEEEEMQEE 98 PA +Q+ + E++ EEEEE+E +EE Sbjct: 423 PARLQQQEEEDEEEEEEEEEEEKEEEEE 450 >gi|157266334 tubby like protein 1 [Homo sapiens] Length = 542 Score = 37.7 bits (86), Expect = 0.003 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 24/123 (19%) Query: 10 PTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISR 69 PTG +P + A R P + + DP A ++ R+ + PR+ ++R Sbjct: 54 PTGSKPR---KPGAGRTGRPREEPSPDPAQARAPQTVYARFLRDPEAKKRDPRETFLVAR 110 Query: 70 RPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKL--KIPMDNKE 127 P AE+EEEEE ++E + EE+E EEK E + L K P+ K Sbjct: 111 AP--------------DAEDEEEEEEEDE-----EDEEEEAEEKKEKILLPPKKPLREKS 151 Query: 128 EAE 130 A+ Sbjct: 152 SAD 154 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 37.0 bits (84), Expect = 0.005 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 17/130 (13%) Query: 14 EPAWKARTPAR-----RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCS-----FTPRK 63 EPA + TP R P P P +AS + F R C+ F P + Sbjct: 729 EPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLE 788 Query: 64 ARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVK-LKIP 122 +++++ A ++ + EQ+A EE+E E + E + +E E E++ E+ + +K+ Sbjct: 789 GSKLAKKRADLVEK-VRREAEQRAREEKERERERE-----REKEREREKERELERSVKLA 842 Query: 123 MDNKEEAECP 132 + + ECP Sbjct: 843 QEGRAPVECP 852 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 37.0 bits (84), Expect = 0.005 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 17/130 (13%) Query: 14 EPAWKARTPAR-----RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCS-----FTPRK 63 EPA + TP R P P P +AS + F R C+ F P + Sbjct: 729 EPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLE 788 Query: 64 ARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVK-LKIP 122 +++++ A ++ + EQ+A EE+E E + E + +E E E++ E+ + +K+ Sbjct: 789 GSKLAKKRADLVEK-VRREAEQRAREEKERERERE-----REKEREREKERELERSVKLA 842 Query: 123 MDNKEEAECP 132 + + ECP Sbjct: 843 QEGRAPVECP 852 >gi|118498345 AT-binding transcription factor 1 [Homo sapiens] Length = 3703 Score = 36.6 bits (83), Expect = 0.006 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 82 PGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEAE 130 P E++AEEEEEEE EE + EE+E EE+ E K P + EE E Sbjct: 458 PAEEEAEEEEEEEEAEEEE--EEEEEEEEEEEDEGCKGLFPSELDEELE 504 Score = 29.3 bits (64), Expect = 0.94 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%) Query: 74 PGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEG 110 P +++ + E++ EEEEEE +EE + EEDEG Sbjct: 458 PAEEEAEEEEEEEEAEEEEEEEEEE----EEEEEDEG 490 >gi|116235474 LKB1 interacting protein [Homo sapiens] Length = 1099 Score = 36.6 bits (83), Expect = 0.006 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 11/92 (11%) Query: 27 PGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPA-GPGKQDTKMPGEQ 85 P P P T P + TA R P + +R P P K ++ E Sbjct: 454 PLPATPTTSAPSAPPASSQGPDTAPR--------PSPPQEEARGPQESPQKMSEEVRAEP 505 Query: 86 QAEEEEEE--EMQEEMVLLVKGEEDEGEEKYE 115 Q EEEE+E E +EE ++ +GEE+ GEE+ E Sbjct: 506 QEEEEEKEGKEEKEEGEMVEQGEEEAGEEEEE 537 >gi|169218320 PREDICTED: similar to BCL2-associated transcription factor 1 isoform 2 [Homo sapiens] Length = 869 Score = 35.8 bits (81), Expect = 0.010 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%) Query: 6 GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64 GGR G P W R R P G+ +R P S + + R R S +PR + Sbjct: 83 GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 140 Query: 65 RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108 S P + +++ ++ E E QEE L K +E+ Sbjct: 141 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 184 >gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo sapiens] Length = 747 Score = 35.8 bits (81), Expect = 0.010 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%) Query: 6 GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64 GGR G P W R R P G+ +R P S + + R R S +PR + Sbjct: 85 GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 142 Query: 65 RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108 S P + +++ ++ E E QEE L K +E+ Sbjct: 143 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 186 >gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo sapiens] Length = 869 Score = 35.8 bits (81), Expect = 0.010 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%) Query: 6 GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64 GGR G P W R R P G+ +R P S + + R R S +PR + Sbjct: 83 GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 140 Query: 65 RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108 S P + +++ ++ E E QEE L K +E+ Sbjct: 141 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 184 >gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo sapiens] Length = 920 Score = 35.8 bits (81), Expect = 0.010 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%) Query: 6 GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64 GGR G P W R R P G+ +R P S + + R R S +PR + Sbjct: 85 GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 142 Query: 65 RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108 S P + +++ ++ E E QEE L K +E+ Sbjct: 143 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 186 >gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] Length = 1812 Score = 35.8 bits (81), Expect = 0.010 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%) Query: 9 QPTGLEPAWKARTPARRPPGPGKPDTRD----PFYASGNESFGCTAQREGKRCSFTPRKA 64 Q G P + R P R PPGP PD + P SG++ + + F P Sbjct: 169 QFNGSPPRPQPRGP-RTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHRED----YFEPISP 223 Query: 65 RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQE-EMVLLVKGEEDEGEEKYEVVKLKIPM 123 R S Q+ + E + EEE++EE +E E + V+ EEDE E+ V IP Sbjct: 224 DRNSV------PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVD-SIPE 276 Query: 124 DNKEEAE 130 + +E+ E Sbjct: 277 EEEEDEE 283 >gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] Length = 1147 Score = 35.8 bits (81), Expect = 0.010 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%) Query: 9 QPTGLEPAWKARTPARRPPGPGKPDTRD----PFYASGNESFGCTAQREGKRCSFTPRKA 64 Q G P + R P R PPGP PD + P SG++ + + F P Sbjct: 169 QFNGSPPRPQPRGP-RTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHRED----YFEPISP 223 Query: 65 RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQE-EMVLLVKGEEDEGEEKYEVVKLKIPM 123 R S Q+ + E + EEE++EE +E E + V+ EEDE E+ V IP Sbjct: 224 DRNSV------PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVD-SIPE 276 Query: 124 DNKEEAE 130 + +E+ E Sbjct: 277 EEEEDEE 283 >gi|116268091 PHD finger protein 23 [Homo sapiens] Length = 403 Score = 35.0 bits (79), Expect = 0.017 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 62 RKARRISRRPA-GPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGE 106 +KA R R P GP + ++ EEEEEEE +EEM +V GE Sbjct: 224 KKAERGDRLPPPGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGGE 269 >gi|58761548 tau tubulin kinase 1 [Homo sapiens] Length = 1321 Score = 35.0 bits (79), Expect = 0.017 Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 70 RPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYE 115 +P GK++ + E + EEEE+EE +EE + EE+E EE+ E Sbjct: 726 QPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771 Score = 30.8 bits (68), Expect = 0.32 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 71 PAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEA 129 P P + E++ EEE+EEE +E+ EE+E EE+ E + + + +EEA Sbjct: 721 PLAPVQPQANGKEEEEEEEEDEEEEEED-------EEEEEEEEEEEEEEEEEEEEEEEA 772 Score = 30.4 bits (67), Expect = 0.42 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 83 GEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEAE 130 G+++ EEEEE+E +EE EDE EE+ E + + + +EE E Sbjct: 731 GKEEEEEEEEDEEEEE--------EDEEEEEEEEEEEEEEEEEEEEEE 770 >gi|19924103 synapsin II isoform IIa [Homo sapiens] Length = 582 Score = 35.0 bits (79), Expect = 0.017 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Query: 6 GGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREG 54 G QP G++P K P R PPGP P P +S + S QR G Sbjct: 458 GPGQPQGMQPPGKVLPPRRLPPGPSLP----PSSSSSSSSSSSAPQRPG 502 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 35.0 bits (79), Expect = 0.017 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 15 PAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAGP 74 PA + R+ +R P G+ +R P SG S T R G+ S TPR+ R SR Sbjct: 652 PARRGRSRSRTPARRGRSRSRTPARRSGR-SRSRTPARRGRSRSRTPRRGRSRSRSLVRR 710 Query: 75 GKQDTKMP 82 G+ ++ P Sbjct: 711 GRSHSRTP 718 Score = 28.9 bits (63), Expect = 1.2 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 16 AWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAGPG 75 A + R+ +R P G+ +R P A S T R R S TP + R SR PA G Sbjct: 557 ARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSR-SRTPTRRRSRSRTPARRG 613 Query: 76 KQDTKMPGEQQA 87 + ++ P +++ Sbjct: 614 RSRSRTPARRRS 625 Score = 28.1 bits (61), Expect = 2.1 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%) Query: 18 KARTPARR-----PPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTP-RKARRISRRP 71 ++RTPARR P + +R P SG S T R G+ S TP R+ R SR P Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGR-SRSRTPARRGRSRSRTPARRGRSRSRTP 674 Query: 72 A-GPGKQDTKMPGEQ 85 A G+ ++ P + Sbjct: 675 ARRSGRSRSRTPARR 689 >gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo sapiens] Length = 1483 Score = 34.7 bits (78), Expect = 0.022 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 11/61 (18%) Query: 61 PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK 120 P ARR SR G+ T+ + +E++E +E +EE EE+E EE YEV L+ Sbjct: 1233 PATARRNSR-----GRNYTEESASEDSEDDESDEEEEEE------EEEEEEEDYEVAGLR 1281 Query: 121 I 121 + Sbjct: 1282 L 1282 >gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo sapiens] Length = 142 Score = 34.7 bits (78), Expect = 0.022 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%) Query: 45 SFGCTAQREGKRCSFTPRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVK 104 S T+ R+ +R R+ +R + +++ K +++ +EEEEEE +EE Sbjct: 56 SMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEE------ 109 Query: 105 GEEDEGEEKYEVVKLKIPMDNKE 127 EE+E EE+ E V + +E Sbjct: 110 -EEEEEEEEEEEVSFSLATRERE 131 Score = 33.1 bits (74), Expect = 0.065 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 51 QREGKRCSFTPRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQE-EMVLLVKGEEDE 109 +RE KR K R RR K++ + E++ EEEEEEE +E L + E E Sbjct: 77 RREEKR---REEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133 Query: 110 GEEK 113 EEK Sbjct: 134 TEEK 137 Score = 26.6 bits (57), Expect = 6.1 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Query: 56 RCSFTPRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYE 115 R S AR+ RR + K E++ EE+ EE + E K EE E EE+ E Sbjct: 54 RHSMAGTSARKSQRR-------EEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106 Query: 116 VVKLKIPMDNKEE 128 + + + +EE Sbjct: 107 EEEEEEEEEEEEE 119 >gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sapiens] Length = 2715 Score = 34.7 bits (78), Expect = 0.022 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Query: 72 AGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEAEC 131 +G G EQ+ ++EEEE+ +EE K +E E +E+ V + +P KEEA+ Sbjct: 346 SGQGGSPCWKKQEQKLDDEEEEKKEEE----EKDKEGEEKEERAVAEEMMPAAEKEEAKL 401 Query: 132 P 132 P Sbjct: 402 P 402 >gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapiens] Length = 436 Score = 34.3 bits (77), Expect = 0.029 Identities = 16/54 (29%), Positives = 34/54 (62%) Query: 75 GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 G+Q+ +M +++ +++EE+M E+ + K EE GE++ +V K + + +EE Sbjct: 202 GEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEE 255 Score = 32.0 bits (71), Expect = 0.15 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 69 RRPAGPGKQDTKMPGEQQAE-EEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE 127 R G ++ GEQ+ + E+EE+M E+ + K EE GE++ ++ K + M +E Sbjct: 181 REQEGQVREQEGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQE 240 Query: 128 E 128 E Sbjct: 241 E 241 Score = 31.6 bits (70), Expect = 0.19 Identities = 15/53 (28%), Positives = 33/53 (62%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 KQ+ ++ +++ ++EE+M+++ + K EE GE+K ++ + K M +EE Sbjct: 363 KQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEE 415 Score = 30.8 bits (68), Expect = 0.32 Identities = 16/53 (30%), Positives = 32/53 (60%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 +Q+ +M +++ E+EE+M+E+ + K EE E+K ++ + K M +EE Sbjct: 300 EQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEE 352 Score = 30.0 bits (66), Expect = 0.55 Identities = 14/54 (25%), Positives = 34/54 (62%) Query: 75 GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 G+Q+ +M +++ E+EE+M+E+ + + EE G+++ ++ + K M ++E Sbjct: 292 GEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKE 345 Score = 30.0 bits (66), Expect = 0.55 Identities = 15/53 (28%), Positives = 32/53 (60%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 KQ+ +M +++ E++E+M E+ + + EE GE+K ++ K + M ++E Sbjct: 384 KQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEEHMGEQKE 436 Score = 29.6 bits (65), Expect = 0.72 Identities = 14/39 (35%), Positives = 24/39 (61%) Query: 75 GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEK 113 G+Q +M +++ E+EE+M E+ + K EE GE+K Sbjct: 397 GEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEEHMGEQK 435 Score = 28.5 bits (62), Expect = 1.6 Identities = 11/54 (20%), Positives = 35/54 (64%) Query: 75 GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 G+Q+ ++ +++ +++EE+M+++ + + EE E++ +++K K + +E+ Sbjct: 237 GEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQ 290 Score = 28.5 bits (62), Expect = 1.6 Identities = 14/53 (26%), Positives = 32/53 (60%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 +Q+ +M +++ E++E+M E+ + K EE GE++ ++ K + + +EE Sbjct: 321 EQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEE 373 Score = 27.7 bits (60), Expect = 2.7 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%) Query: 76 KQDTKM--PGEQQAEEEEEEEMQEEMVLLVK----GEEDEGEEKYEVVKLKIPMDNKEE 128 KQ+ +M EQ E+EE+ QEE +L K EE GE++ ++ + + M +EE Sbjct: 252 KQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEE 310 Score = 27.3 bits (59), Expect = 3.6 Identities = 14/53 (26%), Positives = 31/53 (58%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 KQ+ +M +++ ++EE+M E+ + K EE +++ ++ K + M +EE Sbjct: 217 KQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEE 269 Score = 27.3 bits (59), Expect = 3.6 Identities = 12/53 (22%), Positives = 33/53 (62%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 KQ+ +M +++ ++EE+M+++ + + +E GE+K ++ + + M ++E Sbjct: 370 KQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKE 422 Score = 26.9 bits (58), Expect = 4.7 Identities = 13/54 (24%), Positives = 33/54 (61%) Query: 75 GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 G+Q+ +M +++ E+EE++Q++ + K EE +++ ++ + + M +EE Sbjct: 223 GEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEE 276 Score = 26.6 bits (57), Expect = 6.1 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 84 EQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 EQ E+EE+ + QEE V K EE +++ ++ K + M +EE Sbjct: 352 EQMGEQEEQMQKQEEQVR--KQEEQMRKQEEQMRKQEEQMRKQEE 394 Score = 26.2 bits (56), Expect = 8.0 Identities = 13/53 (24%), Positives = 31/53 (58%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 +Q+ +M +++ E+EE+M ++ + + +E E+K ++ K + M +EE Sbjct: 307 EQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEE 359 Score = 26.2 bits (56), Expect = 8.0 Identities = 13/53 (24%), Positives = 31/53 (58%) Query: 76 KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128 KQ+ +M +++ ++EE+M E+ + + +E E++ ++ + K M +EE Sbjct: 377 KQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEE 429 >gi|91208420 bassoon protein [Homo sapiens] Length = 3926 Score = 34.3 bits (77), Expect = 0.029 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 8/111 (7%) Query: 10 PTGLEPAWKARTPARRPPGPGKPDTRD-PFYASGNESFGCTAQREGKRCSFTPRKARRIS 68 P P + + A + PG G P + P A+ E T K + P A Sbjct: 2274 PPAEGPVYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKEAAGAPAPAPLAG 2333 Query: 69 RRPA-----GPGKQDTKMPG--EQQAEEEEEEEMQEEMVLLVKGEEDEGEE 112 ++P G G PG +++A +EE + Q+E +L ++ E E E+ Sbjct: 2334 QKPPADAAPGGGSGALSRPGFEKEEASQEERQRKQQEQLLQLERERVELEK 2384 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.308 0.130 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,342,780 Number of Sequences: 37866 Number of extensions: 439809 Number of successful extensions: 8226 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 342 Number of HSP's successfully gapped in prelim test: 326 Number of HSP's that attempted gapping in prelim test: 4095 Number of HSP's gapped (non-prelim): 2575 length of query: 132 length of database: 18,247,518 effective HSP length: 91 effective length of query: 41 effective length of database: 14,801,712 effective search space: 606870192 effective search space used: 606870192 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.