Guide to the Human Genome
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Search of human proteins with 239751067

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751067 PREDICTED: hypothetical protein XP_002347693 [Homo
sapiens]
         (132 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751067 PREDICTED: hypothetical protein XP_002347693 [Homo ...   276   3e-75
gi|214831364 zinc finger protein 771 [Homo sapiens]                    97   5e-21
gi|214831336 zinc finger protein 771 [Homo sapiens]                    97   5e-21
gi|87298939 hypothetical protein LOC131831 [Homo sapiens]              47   6e-06
gi|239756568 PREDICTED: similar to BCL2-associated transcription...    40   7e-04
gi|206597556 kelch domain containing 7B [Homo sapiens]                 40   7e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     39   0.001
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         39   0.002
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    39   0.002
gi|31543392 peroxisome proliferator-activated receptor gamma, co...    38   0.003
gi|157266334 tubby like protein 1 [Homo sapiens]                       38   0.003
gi|55750053 atrophin-1 [Homo sapiens]                                  37   0.005
gi|55750041 atrophin-1 [Homo sapiens]                                  37   0.005
gi|118498345 AT-binding transcription factor 1 [Homo sapiens]          37   0.006
gi|116235474 LKB1 interacting protein [Homo sapiens]                   37   0.006
gi|169218320 PREDICTED: similar to BCL2-associated transcription...    36   0.010
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H...    36   0.010
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H...    36   0.010
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom...    36   0.010
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]     36   0.010
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]     36   0.010
gi|116268091 PHD finger protein 23 [Homo sapiens]                      35   0.017
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        35   0.017
gi|19924103 synapsin II isoform IIa [Homo sapiens]                     35   0.017
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        35   0.017
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo...    35   0.022
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ...    35   0.022
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    35   0.022
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi...    34   0.029
gi|91208420 bassoon protein [Homo sapiens]                             34   0.029

>gi|239751067 PREDICTED: hypothetical protein XP_002347693 [Homo
           sapiens]
          Length = 132

 Score =  276 bits (707), Expect = 3e-75
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MATAVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFT 60
           MATAVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFT
Sbjct: 1   MATAVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFT 60

Query: 61  PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK 120
           PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK
Sbjct: 61  PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK 120

Query: 121 IPMDNKEEAECP 132
           IPMDNKEEAECP
Sbjct: 121 IPMDNKEEAECP 132


>gi|214831364 zinc finger protein 771 [Homo sapiens]
          Length = 317

 Score = 96.7 bits (239), Expect = 5e-21
 Identities = 50/55 (90%), Positives = 50/55 (90%), Gaps = 3/55 (5%)

Query: 81  MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE---EAECP 132
           MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE   EA  P
Sbjct: 1   MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEVPGEAPAP 55


>gi|214831336 zinc finger protein 771 [Homo sapiens]
          Length = 317

 Score = 96.7 bits (239), Expect = 5e-21
 Identities = 50/55 (90%), Positives = 50/55 (90%), Gaps = 3/55 (5%)

Query: 81  MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE---EAECP 132
           MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE   EA  P
Sbjct: 1   MPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEVPGEAPAP 55


>gi|87298939 hypothetical protein LOC131831 [Homo sapiens]
          Length = 663

 Score = 46.6 bits (109), Expect = 6e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 4/67 (5%)

Query: 69  RRPAG---PGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDN 125
           R P+G   PGK+D K   E+  EEEEEEE++EE   + + EE+  EE+ EVV+ ++ +  
Sbjct: 5   RSPSGFGDPGKKDQKESEEELEEEEEEEEVEEEEEEVEEEEEEVEEEEEEVVEEEL-VGE 63

Query: 126 KEEAECP 132
           ++E E P
Sbjct: 64  EQELEAP 70


>gi|239756568 PREDICTED: similar to BCL2-associated transcription
           factor 1 [Homo sapiens]
          Length = 869

 Score = 39.7 bits (91), Expect = 7e-04
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 3/127 (2%)

Query: 6   GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64
           GGR   G   P W  R    R P  G+  +R P   S +     +  R   R S +PR +
Sbjct: 83  GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 140

Query: 65  RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMD 124
              S  P        +   +++  ++ E E+QEE  L  K +E+  +         I   
Sbjct: 141 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGELQEESPLKSKSQEEPKDTFEHDSSESIDEF 200

Query: 125 NKEEAEC 131
           NK  A C
Sbjct: 201 NKSSATC 207


>gi|206597556 kelch domain containing 7B [Homo sapiens]
          Length = 594

 Score = 39.7 bits (91), Expect = 7e-04
 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 16/100 (16%)

Query: 10  PTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISR 69
           P    P   A+ PA+RPPGP          +S   S      R+  RC   P   + +  
Sbjct: 96  PQAAMPRGPAQPPAQRPPGPAAS-------SSARRSQPVPQLRKRSRCEIAPSSEQEV-- 146

Query: 70  RPAGPGKQDTKMPGE-------QQAEEEEEEEMQEEMVLL 102
           RPA  G    + PGE         A  E++EE ++ MV L
Sbjct: 147 RPAASGDPQGEAPGEGGSPAGRSGALTEKQEEARKLMVFL 186


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 18/141 (12%)

Query: 8   RQPTGLEPAWKARTPARR----PP---GPGKPDTRDPFYASGNESFGCTAQREGKRCSF- 59
           + P  ++   KA++PA+     PP    P K + + P      E     A+ E K  +  
Sbjct: 539 KSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598

Query: 60  -TPRKARRISRRPA-------GPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGE 111
            +P KA+   +  A        P K++ K P E ++ E+ +   +EE     K +  E E
Sbjct: 599 KSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKE 658

Query: 112 EKYEVVKLKIPMDNKEEAECP 132
           E     K K P+  K EA+ P
Sbjct: 659 EAKSPEKAKSPV--KAEAKSP 677



 Score = 34.7 bits (78), Expect = 0.022
 Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 20/135 (14%)

Query: 18  KARTPAR-----RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPA 72
           +A++PA      +   P K + + P  A   E      + E K  +      +  ++ PA
Sbjct: 571 EAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPA 630

Query: 73  ---------GPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKL---- 119
                     P K++ K P + ++ E+EE +  E+    VK E    E+    VK     
Sbjct: 631 EVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKS 690

Query: 120 --KIPMDNKEEAECP 132
             K     KEEA+ P
Sbjct: 691 PEKAKSPVKEEAKSP 705



 Score = 32.7 bits (73), Expect = 0.085
 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 35/133 (26%)

Query: 4   AVGGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRK 63
           A GG + T   PA +A +P +    P K + + P  A                       
Sbjct: 494 AEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKS--------------------- 532

Query: 64  ARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIP- 122
                     P K++ K P E ++ E+ +   +EE     + +  E EE     ++K P 
Sbjct: 533 ----------PEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPE 582

Query: 123 ---MDNKEEAECP 132
                 KEEA+ P
Sbjct: 583 KAKSPAKEEAKSP 595



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 11/123 (8%)

Query: 18  KARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKAR----RISRRPAG 73
           +A+TP  +   P K + + P  A   E       +  +  +    +AR    +   +   
Sbjct: 729 EAKTP-EKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKS 787

Query: 74  PGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEG----EEKYEVVKLKIPMDNKEEA 129
           P K++ K P + ++  +E+ +  E+ +   K EE +     EEK + VK+K P    EE 
Sbjct: 788 PVKEEVKSPEKAKSPLKEDAKAPEKEI--PKKEEVKSPVKEEEKPQEVKVKEPPKKAEEE 845

Query: 130 ECP 132
           + P
Sbjct: 846 KAP 848



 Score = 26.6 bits (57), Expect = 6.1
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 84  EQQAEEEEEEEMQEEMVLLVKGEEDE---GEEKYEVVKLKIPMDNKEEAECP 132
           E+  EEEE+E  +EE      GEE+E   GEE+ +    +     ++EA+ P
Sbjct: 468 EEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSP 519



 Score = 26.2 bits (56), Expect = 8.0
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 20/124 (16%)

Query: 18  KARTPAR-RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAGPGK 76
           KA++P +     P K  +     A   E      + E K    +P KA+        P K
Sbjct: 665 KAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAK----SPEKAK-------SPVK 713

Query: 77  QDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGE-----EKYEVVKLKIP---MDNKEE 128
           ++ K P + ++  +EE +  E+    VK E    E     EK + + +K P      KEE
Sbjct: 714 EEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEE 773

Query: 129 AECP 132
           A  P
Sbjct: 774 ARSP 777


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 16/103 (15%)

Query: 10  PTGLEPAWKARTPARRPPGPGKP--DTRDPFYASGNESFGCTAQREGKRCSFTPRKARRI 67
           P+   P+     P   PP P  P  D  DPF+ + +E++      E K   F P  +   
Sbjct: 201 PSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPT-DEAYSPPPAPEQKYDPFEPTGSNPS 259

Query: 68  SRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEG 110
           S   AG     T  P E++ EEEEEEE +E+       EE+EG
Sbjct: 260 SS--AG-----TPSPEEEEEEEEEEEEEEED------EEEEEG 289



 Score = 30.8 bits (68), Expect = 0.32
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 14   EPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAG 73
            E +W     A + P    P    P  A   +S    +  +    SF P +A   +    G
Sbjct: 961  ETSWSGEERAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGG 1020

Query: 74   PGKQDTKMPGEQQAEEEEEEEMQEE 98
              ++      E++ EEEEEEE +EE
Sbjct: 1021 AEEE------EEEEEEEEEEEEEEE 1039


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 7   GRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARR 66
           GR+P G         P R PP PGKP+ R P    GN+S G    R GK     P+   +
Sbjct: 38  GRRPQG------GNQPQRTPPPPGKPEGRPP--QGGNQSQG-PPPRPGKPEGPPPQGGNQ 88

Query: 67  ISRRPAGPGKQDTKMP 82
               P  PGK + + P
Sbjct: 89  SQGPPPRPGKPEGQPP 104


>gi|31543392 peroxisome proliferator-activated receptor gamma,
           coactivator 1 beta [Homo sapiens]
          Length = 1023

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 15  PAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQRE--GKRCSFTPRK--ARRISRR 70
           P + + TP  RP  P K     P   S  E     A  +  G R S  P +   +R  RR
Sbjct: 364 PVYASLTPRSRPRPP-KDSQASPGRPSSVEEVRIAASPKSTGPRPSLRPLRLEVKREVRR 422

Query: 71  PAGPGKQDTKMPGEQQAEEEEEEEMQEE 98
           PA   +Q+ +   E++ EEEEE+E +EE
Sbjct: 423 PARLQQQEEEDEEEEEEEEEEEKEEEEE 450


>gi|157266334 tubby like protein 1 [Homo sapiens]
          Length = 542

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 24/123 (19%)

Query: 10  PTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISR 69
           PTG +P    +  A R   P +  + DP  A   ++      R+ +     PR+   ++R
Sbjct: 54  PTGSKPR---KPGAGRTGRPREEPSPDPAQARAPQTVYARFLRDPEAKKRDPRETFLVAR 110

Query: 70  RPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKL--KIPMDNKE 127
            P               AE+EEEEE ++E     + EE+E EEK E + L  K P+  K 
Sbjct: 111 AP--------------DAEDEEEEEEEDE-----EDEEEEAEEKKEKILLPPKKPLREKS 151

Query: 128 EAE 130
            A+
Sbjct: 152 SAD 154


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 17/130 (13%)

Query: 14  EPAWKARTPAR-----RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCS-----FTPRK 63
           EPA +  TP       R P P       P +AS +  F     R    C+     F P +
Sbjct: 729 EPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLE 788

Query: 64  ARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVK-LKIP 122
             +++++ A   ++  +   EQ+A EE+E E + E     + +E E E++ E+ + +K+ 
Sbjct: 789 GSKLAKKRADLVEK-VRREAEQRAREEKERERERE-----REKEREREKERELERSVKLA 842

Query: 123 MDNKEEAECP 132
            + +   ECP
Sbjct: 843 QEGRAPVECP 852


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 17/130 (13%)

Query: 14  EPAWKARTPAR-----RPPGPGKPDTRDPFYASGNESFGCTAQREGKRCS-----FTPRK 63
           EPA +  TP       R P P       P +AS +  F     R    C+     F P +
Sbjct: 729 EPAEEYETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLE 788

Query: 64  ARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVK-LKIP 122
             +++++ A   ++  +   EQ+A EE+E E + E     + +E E E++ E+ + +K+ 
Sbjct: 789 GSKLAKKRADLVEK-VRREAEQRAREEKERERERE-----REKEREREKERELERSVKLA 842

Query: 123 MDNKEEAECP 132
            + +   ECP
Sbjct: 843 QEGRAPVECP 852


>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
          Length = 3703

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 82  PGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEAE 130
           P E++AEEEEEEE  EE     + EE+E EE+ E  K   P +  EE E
Sbjct: 458 PAEEEAEEEEEEEEAEEEE--EEEEEEEEEEEDEGCKGLFPSELDEELE 504



 Score = 29.3 bits (64), Expect = 0.94
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%)

Query: 74  PGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEG 110
           P +++ +   E++  EEEEEE +EE     + EEDEG
Sbjct: 458 PAEEEAEEEEEEEEAEEEEEEEEEE----EEEEEDEG 490


>gi|116235474 LKB1 interacting protein [Homo sapiens]
          Length = 1099

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 27  PGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPA-GPGKQDTKMPGEQ 85
           P P  P T  P     +     TA R        P   +  +R P   P K   ++  E 
Sbjct: 454 PLPATPTTSAPSAPPASSQGPDTAPR--------PSPPQEEARGPQESPQKMSEEVRAEP 505

Query: 86  QAEEEEEE--EMQEEMVLLVKGEEDEGEEKYE 115
           Q EEEE+E  E +EE  ++ +GEE+ GEE+ E
Sbjct: 506 QEEEEEKEGKEEKEEGEMVEQGEEEAGEEEEE 537


>gi|169218320 PREDICTED: similar to BCL2-associated transcription
           factor 1 isoform 2 [Homo sapiens]
          Length = 869

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%)

Query: 6   GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64
           GGR   G   P W  R    R P  G+  +R P   S +     +  R   R S +PR +
Sbjct: 83  GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 140

Query: 65  RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108
              S  P        +   +++  ++ E E QEE  L  K +E+
Sbjct: 141 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 184


>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
           sapiens]
          Length = 747

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%)

Query: 6   GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64
           GGR   G   P W  R    R P  G+  +R P   S +     +  R   R S +PR +
Sbjct: 85  GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 142

Query: 65  RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108
              S  P        +   +++  ++ E E QEE  L  K +E+
Sbjct: 143 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 186


>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
           sapiens]
          Length = 869

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%)

Query: 6   GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64
           GGR   G   P W  R    R P  G+  +R P   S +     +  R   R S +PR +
Sbjct: 83  GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 140

Query: 65  RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108
              S  P        +   +++  ++ E E QEE  L  K +E+
Sbjct: 141 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 184


>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
           sapiens]
          Length = 920

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 3/104 (2%)

Query: 6   GGRQPTG-LEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKA 64
           GGR   G   P W  R    R P  G+  +R P   S +     +  R   R S +PR +
Sbjct: 85  GGRYHRGGYRPVWNRRHS--RSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSS 142

Query: 65  RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEED 108
              S  P        +   +++  ++ E E QEE  L  K +E+
Sbjct: 143 SSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEE 186


>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
          Length = 1812

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%)

Query: 9   QPTGLEPAWKARTPARRPPGPGKPDTRD----PFYASGNESFGCTAQREGKRCSFTPRKA 64
           Q  G  P  + R P R PPGP  PD  +    P   SG++      + +     F P   
Sbjct: 169 QFNGSPPRPQPRGP-RTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHRED----YFEPISP 223

Query: 65  RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQE-EMVLLVKGEEDEGEEKYEVVKLKIPM 123
            R S        Q+ +   E + EEE++EE +E E  + V+ EEDE E+    V   IP 
Sbjct: 224 DRNSV------PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVD-SIPE 276

Query: 124 DNKEEAE 130
           + +E+ E
Sbjct: 277 EEEEDEE 283


>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
          Length = 1147

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%)

Query: 9   QPTGLEPAWKARTPARRPPGPGKPDTRD----PFYASGNESFGCTAQREGKRCSFTPRKA 64
           Q  G  P  + R P R PPGP  PD  +    P   SG++      + +     F P   
Sbjct: 169 QFNGSPPRPQPRGP-RTPPGPPPPDDDEDDPVPLPVSGDKEEDAPHRED----YFEPISP 223

Query: 65  RRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQE-EMVLLVKGEEDEGEEKYEVVKLKIPM 123
            R S        Q+ +   E + EEE++EE +E E  + V+ EEDE E+    V   IP 
Sbjct: 224 DRNSV------PQEGQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVD-SIPE 276

Query: 124 DNKEEAE 130
           + +E+ E
Sbjct: 277 EEEEDEE 283


>gi|116268091 PHD finger protein 23 [Homo sapiens]
          Length = 403

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 62  RKARRISRRPA-GPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGE 106
           +KA R  R P  GP +        ++ EEEEEEE +EEM  +V GE
Sbjct: 224 KKAERGDRLPPPGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGGE 269


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 70  RPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYE 115
           +P   GK++ +   E + EEEE+EE +EE     + EE+E EE+ E
Sbjct: 726 QPQANGKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 771



 Score = 30.8 bits (68), Expect = 0.32
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 71  PAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEA 129
           P  P +       E++ EEE+EEE +E+       EE+E EE+ E  + +   + +EEA
Sbjct: 721 PLAPVQPQANGKEEEEEEEEDEEEEEED-------EEEEEEEEEEEEEEEEEEEEEEEA 772



 Score = 30.4 bits (67), Expect = 0.42
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 8/48 (16%)

Query: 83  GEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEAE 130
           G+++ EEEEE+E +EE        EDE EE+ E  + +   + +EE E
Sbjct: 731 GKEEEEEEEEDEEEEE--------EDEEEEEEEEEEEEEEEEEEEEEE 770


>gi|19924103 synapsin II isoform IIa [Homo sapiens]
          Length = 582

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 6   GGRQPTGLEPAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREG 54
           G  QP G++P  K   P R PPGP  P    P  +S + S     QR G
Sbjct: 458 GPGQPQGMQPPGKVLPPRRLPPGPSLP----PSSSSSSSSSSSAPQRPG 502


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 15  PAWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAGP 74
           PA + R+ +R P   G+  +R P   SG  S   T  R G+  S TPR+ R  SR     
Sbjct: 652 PARRGRSRSRTPARRGRSRSRTPARRSGR-SRSRTPARRGRSRSRTPRRGRSRSRSLVRR 710

Query: 75  GKQDTKMP 82
           G+  ++ P
Sbjct: 711 GRSHSRTP 718



 Score = 28.9 bits (63), Expect = 1.2
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 16  AWKARTPARRPPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTPRKARRISRRPAGPG 75
           A + R+ +R P   G+  +R P  A    S   T  R   R S TP + R  SR PA  G
Sbjct: 557 ARRGRSHSRSPATRGRSRSRTP--ARRGRSRSRTPARRRSR-SRTPTRRRSRSRTPARRG 613

Query: 76  KQDTKMPGEQQA 87
           +  ++ P  +++
Sbjct: 614 RSRSRTPARRRS 625



 Score = 28.1 bits (61), Expect = 2.1
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 18  KARTPARR-----PPGPGKPDTRDPFYASGNESFGCTAQREGKRCSFTP-RKARRISRRP 71
           ++RTPARR      P   +  +R P   SG  S   T  R G+  S TP R+ R  SR P
Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGR-SRSRTPARRGRSRSRTPARRGRSRSRTP 674

Query: 72  A-GPGKQDTKMPGEQ 85
           A   G+  ++ P  +
Sbjct: 675 ARRSGRSRSRTPARR 689


>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
            sapiens]
          Length = 1483

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 11/61 (18%)

Query: 61   PRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLK 120
            P  ARR SR     G+  T+    + +E++E +E +EE       EE+E EE YEV  L+
Sbjct: 1233 PATARRNSR-----GRNYTEESASEDSEDDESDEEEEEE------EEEEEEEDYEVAGLR 1281

Query: 121  I 121
            +
Sbjct: 1282 L 1282


>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
           sapiens]
          Length = 142

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 45  SFGCTAQREGKRCSFTPRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVK 104
           S   T+ R+ +R     R+ +R   +     +++ K   +++ +EEEEEE +EE      
Sbjct: 56  SMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEEEEE------ 109

Query: 105 GEEDEGEEKYEVVKLKIPMDNKE 127
            EE+E EE+ E V   +    +E
Sbjct: 110 -EEEEEEEEEEEVSFSLATRERE 131



 Score = 33.1 bits (74), Expect = 0.065
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 51  QREGKRCSFTPRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQE-EMVLLVKGEEDE 109
           +RE KR      K R   RR     K++ +   E++ EEEEEEE +E    L  +  E E
Sbjct: 77  RREEKR---REEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETE 133

Query: 110 GEEK 113
            EEK
Sbjct: 134 TEEK 137



 Score = 26.6 bits (57), Expect = 6.1
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 7/73 (9%)

Query: 56  RCSFTPRKARRISRRPAGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYE 115
           R S     AR+  RR       + K   E++ EE+  EE + E     K EE E EE+ E
Sbjct: 54  RHSMAGTSARKSQRR-------EEKRREEKRREEKRREEKRREGKRREKEEEKEEEEEEE 106

Query: 116 VVKLKIPMDNKEE 128
             + +   + +EE
Sbjct: 107 EEEEEEEEEEEEE 119


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 72  AGPGKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEEAEC 131
           +G G        EQ+ ++EEEE+ +EE     K +E E +E+  V +  +P   KEEA+ 
Sbjct: 346 SGQGGSPCWKKQEQKLDDEEEEKKEEE----EKDKEGEEKEERAVAEEMMPAAEKEEAKL 401

Query: 132 P 132
           P
Sbjct: 402 P 402


>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 436

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 16/54 (29%), Positives = 34/54 (62%)

Query: 75  GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           G+Q+ +M  +++  +++EE+M E+   + K EE  GE++ +V K +  +  +EE
Sbjct: 202 GEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEE 255



 Score = 32.0 bits (71), Expect = 0.15
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 69  RRPAGPGKQDTKMPGEQQAE-EEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKE 127
           R   G  ++     GEQ+ +  E+EE+M E+   + K EE  GE++ ++ K +  M  +E
Sbjct: 181 REQEGQVREQEGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQE 240

Query: 128 E 128
           E
Sbjct: 241 E 241



 Score = 31.6 bits (70), Expect = 0.19
 Identities = 15/53 (28%), Positives = 33/53 (62%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           KQ+ ++  +++   ++EE+M+++   + K EE  GE+K ++ + K  M  +EE
Sbjct: 363 KQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEE 415



 Score = 30.8 bits (68), Expect = 0.32
 Identities = 16/53 (30%), Positives = 32/53 (60%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           +Q+ +M  +++   E+EE+M+E+   + K EE   E+K ++ + K  M  +EE
Sbjct: 300 EQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEE 352



 Score = 30.0 bits (66), Expect = 0.55
 Identities = 14/54 (25%), Positives = 34/54 (62%)

Query: 75  GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           G+Q+ +M  +++   E+EE+M+E+   + + EE  G+++ ++ + K  M  ++E
Sbjct: 292 GEQEEQMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKE 345



 Score = 30.0 bits (66), Expect = 0.55
 Identities = 15/53 (28%), Positives = 32/53 (60%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           KQ+ +M  +++   E++E+M E+   + + EE  GE+K ++ K +  M  ++E
Sbjct: 384 KQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEEHMGEQKE 436



 Score = 29.6 bits (65), Expect = 0.72
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 75  GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEK 113
           G+Q  +M  +++   E+EE+M E+   + K EE  GE+K
Sbjct: 397 GEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEEHMGEQK 435



 Score = 28.5 bits (62), Expect = 1.6
 Identities = 11/54 (20%), Positives = 35/54 (64%)

Query: 75  GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           G+Q+ ++  +++  +++EE+M+++   + + EE   E++ +++K K   + +E+
Sbjct: 237 GEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQ 290



 Score = 28.5 bits (62), Expect = 1.6
 Identities = 14/53 (26%), Positives = 32/53 (60%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           +Q+ +M  +++   E++E+M E+   + K EE  GE++ ++ K +  +  +EE
Sbjct: 321 EQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQEE 373



 Score = 27.7 bits (60), Expect = 2.7
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)

Query: 76  KQDTKM--PGEQQAEEEEEEEMQEEMVLLVK----GEEDEGEEKYEVVKLKIPMDNKEE 128
           KQ+ +M    EQ  E+EE+   QEE +L  K     EE  GE++ ++ + +  M  +EE
Sbjct: 252 KQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEE 310



 Score = 27.3 bits (59), Expect = 3.6
 Identities = 14/53 (26%), Positives = 31/53 (58%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           KQ+ +M  +++   ++EE+M E+   + K EE   +++ ++ K +  M  +EE
Sbjct: 217 KQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEE 269



 Score = 27.3 bits (59), Expect = 3.6
 Identities = 12/53 (22%), Positives = 33/53 (62%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           KQ+ +M  +++   ++EE+M+++   + + +E  GE+K ++ + +  M  ++E
Sbjct: 370 KQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKE 422



 Score = 26.9 bits (58), Expect = 4.7
 Identities = 13/54 (24%), Positives = 33/54 (61%)

Query: 75  GKQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           G+Q+ +M  +++   E+EE++Q++   + K EE   +++ ++ + +  M  +EE
Sbjct: 223 GEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQMREQEE 276



 Score = 26.6 bits (57), Expect = 6.1
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 84  EQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           EQ  E+EE+ + QEE V   K EE   +++ ++ K +  M  +EE
Sbjct: 352 EQMGEQEEQMQKQEEQVR--KQEEQMRKQEEQMRKQEEQMRKQEE 394



 Score = 26.2 bits (56), Expect = 8.0
 Identities = 13/53 (24%), Positives = 31/53 (58%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           +Q+ +M  +++   E+EE+M ++   + + +E   E+K ++ K +  M  +EE
Sbjct: 307 EQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEE 359



 Score = 26.2 bits (56), Expect = 8.0
 Identities = 13/53 (24%), Positives = 31/53 (58%)

Query: 76  KQDTKMPGEQQAEEEEEEEMQEEMVLLVKGEEDEGEEKYEVVKLKIPMDNKEE 128
           KQ+ +M  +++   ++EE+M E+   + + +E   E++ ++ + K  M  +EE
Sbjct: 377 KQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEE 429


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 10   PTGLEPAWKARTPARRPPGPGKPDTRD-PFYASGNESFGCTAQREGKRCSFTPRKARRIS 68
            P    P +  +  A + PG G P   + P  A+  E    T     K  +  P  A    
Sbjct: 2274 PPAEGPVYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAAIKEAAGAPAPAPLAG 2333

Query: 69   RRPA-----GPGKQDTKMPG--EQQAEEEEEEEMQEEMVLLVKGEEDEGEE 112
            ++P      G G      PG  +++A +EE +  Q+E +L ++ E  E E+
Sbjct: 2334 QKPPADAAPGGGSGALSRPGFEKEEASQEERQRKQQEQLLQLERERVELEK 2384


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.308    0.130    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,342,780
Number of Sequences: 37866
Number of extensions: 439809
Number of successful extensions: 8226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 326
Number of HSP's that attempted gapping in prelim test: 4095
Number of HSP's gapped (non-prelim): 2575
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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