Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239751037
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751037 PREDICTED: hypothetical protein [Homo sapiens]
(231 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751037 PREDICTED: hypothetical protein [Homo sapiens] 488 e-138
gi|169210041 PREDICTED: hypothetical protein [Homo sapiens] 461 e-130
gi|169209545 PREDICTED: hypothetical protein [Homo sapiens] 455 e-128
gi|169210556 PREDICTED: hypothetical protein [Homo sapiens] 455 e-128
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 1e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 1e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 1e-04
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens] 43 3e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 40 0.001
gi|55956910 meningioma 1 [Homo sapiens] 39 0.005
gi|11037055 sperm associated antigen 4 [Homo sapiens] 37 0.014
gi|134244285 Notch homolog 3 [Homo sapiens] 36 0.032
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H... 35 0.042
gi|24497554 homeobox A13 [Homo sapiens] 35 0.042
gi|157384971 cyclin G associated kinase [Homo sapiens] 35 0.042
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 35 0.054
gi|12751477 forkhead box L2 [Homo sapiens] 34 0.12
gi|239742880 PREDICTED: hypothetical protein XP_002342669 [Homo ... 34 0.12
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 33 0.16
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 33 0.21
gi|8923789 FEV (ETS oncogene family) [Homo sapiens] 33 0.21
gi|66730481 neuregulin 3 [Homo sapiens] 33 0.27
gi|239756116 PREDICTED: hypothetical protein [Homo sapiens] 33 0.27
gi|239744954 PREDICTED: hypothetical protein XP_002343343 [Homo ... 33 0.27
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 33 0.27
gi|169210223 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|169210432 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|169209908 PREDICTED: hypothetical protein [Homo sapiens] 32 0.35
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 32 0.35
>gi|239751037 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 488 bits (1255), Expect = e-138
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MPVHPDWLGSACLPHXQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCP 60
MPVHPDWLGSACLPH QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCP
Sbjct: 1 MPVHPDWLGSACLPHXQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCP 60
Query: 61 AEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCP 120
AEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCP
Sbjct: 61 AEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCP 120
Query: 121 EPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLRISWHLL 180
EPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLRISWHLL
Sbjct: 121 EPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLRISWHLL 180
Query: 181 ACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAHXGQTMCKSTRESGRS 231
ACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAH GQTMCKSTRESGRS
Sbjct: 181 ACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAHXGQTMCKSTRESGRS 231
>gi|169210041 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 461 bits (1185), Expect = e-130
Identities = 221/237 (93%), Positives = 221/237 (93%), Gaps = 6/237 (2%)
Query: 1 MPVHPDWLGSACLPHX------QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 54
MPVHP WLGSACLPH QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
Query: 55 LSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGS 114
LSPSCPAEAGHGCASTGRQVGVSGAGSSP GPAPCVKCSAWVGTCFPLSLLQAAGGP GS
Sbjct: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
Query: 115 PNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLR 174
PNGFCPEPWAPDHA TLHGLNKSL QGPRSGGAQRKPRAHTGEGVSGL LTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSGLGLTQPRLSSSLR 180
Query: 175 ISWHLLACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAHXGQTMCKSTRESGRS 231
ISWHLLACVATQVGCA RLREKTLGEDYVSAFLPSTGPSWAH QTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLREKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
>gi|169209545 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 455 bits (1170), Expect = e-128
Identities = 219/237 (92%), Positives = 219/237 (92%), Gaps = 6/237 (2%)
Query: 1 MPVHPDWLGSACLPHX------QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 54
MPVHP WLGSACLPH QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
Query: 55 LSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGS 114
LSPSCPAEAGHGCASTGRQVGVSGAGSSP GPAPCVKCSAWVGTCFPLSLLQAAGGP GS
Sbjct: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
Query: 115 PNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLR 174
PNGFCPEPWAPDHA TLHGLNKSL QGPRSGGAQRKPRAHTGEGVS L LTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
Query: 175 ISWHLLACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAHXGQTMCKSTRESGRS 231
ISWHLLACVATQVGCA RL EKTLGEDYVSAFLPSTGPSWAH QTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
>gi|169210556 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 455 bits (1170), Expect = e-128
Identities = 219/237 (92%), Positives = 219/237 (92%), Gaps = 6/237 (2%)
Query: 1 MPVHPDWLGSACLPHX------QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 54
MPVHP WLGSACLPH QSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN
Sbjct: 1 MPVHPAWLGSACLPHASHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGN 60
Query: 55 LSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGS 114
LSPSCPAEAGHGCASTGRQVGVSGAGSSP GPAPCVKCSAWVGTCFPLSLLQAAGGP GS
Sbjct: 61 LSPSCPAEAGHGCASTGRQVGVSGAGSSPSGPAPCVKCSAWVGTCFPLSLLQAAGGPAGS 120
Query: 115 PNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLR 174
PNGFCPEPWAPDHA TLHGLNKSL QGPRSGGAQRKPRAHTGEGVS L LTQPRLSSSLR
Sbjct: 121 PNGFCPEPWAPDHAPTLHGLNKSLCQGPRSGGAQRKPRAHTGEGVSVLGLTQPRLSSSLR 180
Query: 175 ISWHLLACVATQVGCARRLREKTLGEDYVSAFLPSTGPSWAHXGQTMCKSTRESGRS 231
ISWHLLACVATQVGCA RL EKTLGEDYVSAFLPSTGPSWAH QTMCKSTRESGRS
Sbjct: 181 ISWHLLACVATQVGCACRLTEKTLGEDYVSAFLPSTGPSWAHCDQTMCKSTRESGRS 237
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.9 bits (102), Expect = 1e-04
Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 41/185 (22%)
Query: 39 ACAPGRHSGEGPPQGNLSPSC----PAEAGHGCASTGRQVGV--------SGAGSSPPGP 86
A APG PP + SPS P AGH ++T + GA +SPP
Sbjct: 606 ALAPGP-----PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD 660
Query: 87 APCVKC--SAWV-GTCFPLSLLQAAGGPT--------GSPNGFCP--EPWAPDHASTLHG 133
A C +AW G PL+ A G P GS +G C E P+ A+ G
Sbjct: 661 AELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPG 720
Query: 134 LNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLRISWHLLACVATQVGCARRL 193
+L GP G + K A G G S S Q RL L A Q + L
Sbjct: 721 ---ALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGE--------LPLGALQASVVQHL 769
Query: 194 REKTL 198
+TL
Sbjct: 770 LSRTL 774
Score = 28.9 bits (63), Expect = 3.9
Identities = 31/129 (24%), Positives = 42/129 (32%), Gaps = 6/129 (4%)
Query: 41 APGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPP--GPAPCVKCSAWVGT 98
A R GP G SP+ + G A PP GP V ++ T
Sbjct: 158 AGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHST 217
Query: 99 CFPLSLLQAAGGPTGSPNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEG 158
P A S G P + +S+ L+ R GP + G R P +
Sbjct: 218 TEP----SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 273
Query: 159 VSGLSLTQP 167
GL +P
Sbjct: 274 PKGLQALRP 282
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 43.9 bits (102), Expect = 1e-04
Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 41/185 (22%)
Query: 39 ACAPGRHSGEGPPQGNLSPSC----PAEAGHGCASTGRQVGV--------SGAGSSPPGP 86
A APG PP + SPS P AGH ++T + GA +SPP
Sbjct: 875 ALAPGP-----PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD 929
Query: 87 APCVKC--SAWV-GTCFPLSLLQAAGGPT--------GSPNGFCP--EPWAPDHASTLHG 133
A C +AW G PL+ A G P GS +G C E P+ A+ G
Sbjct: 930 AELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPG 989
Query: 134 LNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLRISWHLLACVATQVGCARRL 193
+L GP G + K A G G S S Q RL L A Q + L
Sbjct: 990 ---ALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGE--------LPLGALQASVVQHL 1038
Query: 194 REKTL 198
+TL
Sbjct: 1039 LSRTL 1043
Score = 28.9 bits (63), Expect = 3.9
Identities = 31/129 (24%), Positives = 42/129 (32%), Gaps = 6/129 (4%)
Query: 41 APGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPP--GPAPCVKCSAWVGT 98
A R GP G SP+ + G A PP GP V ++ T
Sbjct: 158 AGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHST 217
Query: 99 CFPLSLLQAAGGPTGSPNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEG 158
P A S G P + +S+ L+ R GP + G R P +
Sbjct: 218 TEP----SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 273
Query: 159 VSGLSLTQP 167
GL +P
Sbjct: 274 PKGLQALRP 282
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.9 bits (102), Expect = 1e-04
Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 41/185 (22%)
Query: 39 ACAPGRHSGEGPPQGNLSPSC----PAEAGHGCASTGRQVGV--------SGAGSSPPGP 86
A APG PP + SPS P AGH ++T + GA +SPP
Sbjct: 567 ALAPGP-----PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPD 621
Query: 87 APCVKC--SAWV-GTCFPLSLLQAAGGPT--------GSPNGFCP--EPWAPDHASTLHG 133
A C +AW G PL+ A G P GS +G C E P+ A+ G
Sbjct: 622 AELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPG 681
Query: 134 LNKSLRQGPRSGGAQRKPRAHTGEGVSGLSLTQPRLSSSLRISWHLLACVATQVGCARRL 193
+L GP G + K A G G S S Q RL L A Q + L
Sbjct: 682 ---ALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGE--------LPLGALQASVVQHL 730
Query: 194 REKTL 198
+TL
Sbjct: 731 LSRTL 735
Score = 28.9 bits (63), Expect = 3.9
Identities = 31/129 (24%), Positives = 42/129 (32%), Gaps = 6/129 (4%)
Query: 41 APGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPP--GPAPCVKCSAWVGT 98
A R GP G SP+ + G A PP GP V ++ T
Sbjct: 149 AGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHST 208
Query: 99 CFPLSLLQAAGGPTGSPNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQRKPRAHTGEG 158
P A S G P + +S+ L+ R GP + G R P +
Sbjct: 209 TEP----SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 264
Query: 159 VSGLSLTQP 167
GL +P
Sbjct: 265 PKGLQALRP 273
>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
Length = 457
Score = 42.7 bits (99), Expect = 3e-04
Identities = 37/107 (34%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 27 VKSPPGDVHAARACAPGR---HSGEGPPQGNLSPSCPAEAGHG-------CASTGRQVGV 76
V+ P GD RA GR GE P G +P AE G A + R G
Sbjct: 339 VEPPTGDGALTRAGPWGRGLTSPGEAPEAGARAPEEEAEGESGGAGATLSSAQSARAPGA 398
Query: 77 SGAGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCPEPW 123
GAGSS G A +A G P +LL A GP G+ + PW
Sbjct: 399 EGAGSSAEGTA-----AAPSGCLLPSTLLPAPQGPLGTVDPQTGHPW 440
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 40.4 bits (93), Expect = 0.001
Identities = 41/151 (27%), Positives = 50/151 (33%), Gaps = 17/151 (11%)
Query: 2 PVHPDWLGSACLPHXQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPA 61
P GS L G ++ P +V R AP E +G+
Sbjct: 625 PAQSSASGSFLLSGWDPEGRGAGETLAGDPAEVLGERGTAPWVEEEEEEEEGS------- 677
Query: 62 EAGHGCASTGRQVGVSGAGSSPPGPAPCVKCS-AWVGTCFPLSLLQAAGGPTGSPNGFCP 120
S G G G S GP PC CS +C PL A G G P CP
Sbjct: 678 -------SPGEDSSSLGGGPSRRGPLPCPLCSREGACSCLPLERGDAVAGWGGHPALGCP 730
Query: 121 EPWAPDHASTLHGLNKSLRQGPRSGGAQRKP 151
P P+ S+L SL P + A P
Sbjct: 731 HP--PEDDSSLRAERGSLADLPMAPPASAPP 759
Score = 28.9 bits (63), Expect = 3.9
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 29 SPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCAST---GRQVGVSGAGSSPPG 85
+PP + A ++ G GPP P P A A++ V G+G S PG
Sbjct: 757 APPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPG 816
Query: 86 PAP 88
P P
Sbjct: 817 PKP 819
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 38.5 bits (88), Expect = 0.005
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 30 PPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTG---RQVGVSGAGSSPPGP 86
PPGD+ R G + GP +L+P P G G G + + G G P P
Sbjct: 638 PPGDLLPRRMGGSGLPADCGPHDPSLAPP-PPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
Query: 87 APCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCP-EPWAPDHASTLHGLNKSLRQGPRSG 145
+P ++ +G L LQ+ G G P+ P PD A++ G + G G
Sbjct: 697 SPGLQFGGSLG---GLGQLQSPGAGVGLPSAASERRPPPPDFATSALG----GQPGFPFG 749
Query: 146 GAQRKPRAHTGEGVS 160
A R+ H+G GV+
Sbjct: 750 AAGRQSTPHSGPGVN 764
>gi|11037055 sperm associated antigen 4 [Homo sapiens]
Length = 437
Score = 37.0 bits (84), Expect = 0.014
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 47 GEGPPQGNLS--PSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLSL 104
G G P+G + PSC G S G G + AGSS PAP + W C ++
Sbjct: 43 GPGEPEGRRARGPSC----GEPALSAGVPGGTTWAGSSQQKPAP--RSHNWQTACGAATV 96
Query: 105 LQAAGGPTGSP 115
A PTGSP
Sbjct: 97 RGGASEPTGSP 107
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 35.8 bits (81), Expect = 0.032
Identities = 42/139 (30%), Positives = 51/139 (36%), Gaps = 20/139 (14%)
Query: 42 PGRHSGEGP---PQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPPG----------PAP 88
PG H G GP P G P A A G + R G +G G P P P
Sbjct: 2034 PGPH-GLGPLLCPPGAFLPGLKA-AQSGSKKSRRPPGKAGLGPQGPRGRGKKLTLACPGP 2091
Query: 89 CVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQ 148
S + L + GGP SP GF E P A+T ++ + GP G
Sbjct: 2092 LADSSVTLSPVDSLDSPRPFGGPPASPGGFPLE--GPYAAATATAVSLAQLGGPGRAGLG 2149
Query: 149 RKPRAHTGEGVSGLSLTQP 167
R+P G V L L P
Sbjct: 2150 RQP---PGGCVLSLGLLNP 2165
>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
sapiens]
Length = 859
Score = 35.4 bits (80), Expect = 0.042
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 5 PDWLGSACLPHXQSSVGGLLVSVKSPP--GDVHAARACAPGRHSGEGPPQGNLSPSCPAE 62
PD L +A + + GG PP GD + APG S + P P P
Sbjct: 611 PDLLSAALGSRGRGATGGAGDPGSPPPARGDTPPSEGSAPGSTSPDSPGGAKGEPPPPVG 670
Query: 63 AGHGCA--STGRQVGVSGAGSSPPG 85
G G TGR+ G SG G S G
Sbjct: 671 PGEGVGLLGTGRE-GTSGRGGSRAG 694
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 35.4 bits (80), Expect = 0.042
Identities = 35/130 (26%), Positives = 44/130 (33%), Gaps = 16/130 (12%)
Query: 9 GSACLPHXQSSVGGLLVSVKSPPGDVHAARA------------CAPGRHSGEGPPQGNLS 56
G PH ++ G SV + AA A APG S G
Sbjct: 54 GGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAP 113
Query: 57 PSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKCSAWVGTCFPLS-LLQAAGGPTGSP 115
PS A A A+ S +G PGPA A C P S Q++ GP P
Sbjct: 114 PSAAAAAAAAAAAAAAAAAASSSGG--PGPAGPAGAEA-AKQCSPCSAAAQSSSGPAALP 170
Query: 116 NGFCPEPWAP 125
G+ + P
Sbjct: 171 YGYFGSGYYP 180
>gi|157384971 cyclin G associated kinase [Homo sapiens]
Length = 1311
Score = 35.4 bits (80), Expect = 0.042
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 82 SPPG-PAPCVKCSAWVGTCFP---LSLLQAAGGPTGSPNGFCPEPWAPDHASTLHGLNKS 137
SP G PAPC ++W + P L + G GSP GF P + P A+T G +
Sbjct: 1060 SPGGQPAPCGSQASWTKSQNPDPFADLGDLSSGLQGSPAGFPPGGFIPKTATTPKGSSSW 1119
Query: 138 LRQGPRSGGAQRKPRA 153
P + GA P+A
Sbjct: 1120 QTSRPPAQGASWPPQA 1135
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 35.0 bits (79), Expect = 0.054
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 22/129 (17%)
Query: 38 RACAPGRHSGEGPPQG-----NLSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVKC 92
RA GRH G +LSP P + T R G PPGPAP
Sbjct: 186 RAAVVGRHEARRLKPGVSVSSSLSPGPPLQRSSSLNETLR-------GRRPPGPAPAA-A 237
Query: 93 SAWVGTCFPLSLLQAA---GGPTGSPNGFCPEPWAPDHASTLHGLNKSLRQGPRSGGAQR 149
A GT P +A + P W P A+ L G +G +GG
Sbjct: 238 GATRGTAAPPGRDPSAWFLDSASACPTPLAARSWHPFVANKLCG------RGKGAGGGAS 291
Query: 150 KPRAHTGEG 158
+P+ G G
Sbjct: 292 RPKEGVGSG 300
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 33.9 bits (76), Expect = 0.12
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 34 VHAARAC--APGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCVK 91
+HAA A AP H PP G LSP+ PA A + G+ A + P A +
Sbjct: 299 LHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELA-MMH 357
Query: 92 CSAW 95
CS W
Sbjct: 358 CSYW 361
>gi|239742880 PREDICTED: hypothetical protein XP_002342669 [Homo
sapiens]
Length = 205
Score = 33.9 bits (76), Expect = 0.12
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 44 RHSGEGPPQGNLSPSCPAEAGHGCASTGRQV-GVSGAGSSPPGP 86
+H GE P + + P+ AGH S GR+V SG GS PGP
Sbjct: 103 KHFGETKPPACGAAASPSPAGHAKESRGREVWEPSGEGSPRPGP 146
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 33.5 bits (75), Expect = 0.16
Identities = 34/132 (25%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Query: 26 SVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAG-HGCASTGRQVGVSGAGSSPP 84
S+ PP ++ PG S +GPPQG+L P P + G G Q +
Sbjct: 844 SMLGPPQELRGP----PGSQSQQGPPQGSLGP--PPQGGMQGPPGPQGQQNPARGPHPSQ 897
Query: 85 GPAPCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCPEPWAPDHASTLHGLNKSLRQGPRS 144
GP P + + P + G TG P P + LN GP
Sbjct: 898 GPIPFQQQKTPLLGDGPRAPFNQEGQSTGPP-PLIPGLGQQGAQGRIPPLNPGQGPGPNK 956
Query: 145 GGAQRKPRAHTG 156
G ++ P H G
Sbjct: 957 GDSRGPPNHHMG 968
Score = 30.0 bits (66), Expect = 1.7
Identities = 41/147 (27%), Positives = 47/147 (31%), Gaps = 26/147 (17%)
Query: 30 PPGDVHAARACAPGRHSGEGPPQGNLSPSCP---------AEAGHGCASTGRQVGVSG-- 78
PPG P H G G PQG + P P + HG R G G
Sbjct: 628 PPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPL 687
Query: 79 AGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCPE----PWAPDHASTLHGL 134
PPGP +G P Q GP G P P+ P P + G
Sbjct: 688 GPQGPPGPQGSSGPQGHMGPQGPPG-PQGHIGPQGPPG---PQGHLGPQGPPGTQGMQG- 742
Query: 135 NKSLRQGPRSGGAQRKPRAHTGEGVSG 161
GPR G Q P H +G G
Sbjct: 743 ----PPGPR--GMQGPPHPHGIQGGPG 763
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 33.1 bits (74), Expect = 0.21
Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 6/152 (3%)
Query: 29 SPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPA- 87
+PP A A A SG G P G + S + + +S+ SG GP
Sbjct: 53 APPSPPAVAAAAAAAGSSGAGVPGGAAAASAASSSSASSSSSSSSSASSGPALLRVGPGF 112
Query: 88 -PCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCPEPWAPDHASTLHGLNKSLRQGPRSGG 146
++ SA +GT L +A G +G G + S +S + P
Sbjct: 113 DAALQVSAAIGT--NLRRFRAVFGESGGGGGSGEDEQFLGFGSDEEVRVRSPTRSPSVKT 170
Query: 147 AQRKPRA--HTGEGVSGLSLTQPRLSSSLRIS 176
+ RKPR +G + L+ P + S L S
Sbjct: 171 SPRKPRGRPRSGSDRNSAILSDPSVFSPLNKS 202
>gi|8923789 FEV (ETS oncogene family) [Homo sapiens]
Length = 238
Score = 33.1 bits (74), Expect = 0.21
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 22 GLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTG---RQVGVSG 78
GL + + PP HAA A A + + L G + GV+
Sbjct: 130 GLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLPFPGLSKLNLMAASAGVAP 189
Query: 79 AGSSP-PGPAPCVKCSAWVGTCFPLSLLQAAGGPTGS 114
AG S PGP P +A +P LQ GP G+
Sbjct: 190 AGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGA 226
>gi|66730481 neuregulin 3 [Homo sapiens]
Length = 696
Score = 32.7 bits (73), Expect = 0.27
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 79 AGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGSPNGFCPEP 122
A +SPPG A SA GT + A GGP G G P
Sbjct: 6 AAASPPGAASAAAASAEEGTAAAAAAAAAGGGPDGGGEGAAEPP 49
>gi|239756116 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 32.7 bits (73), Expect = 0.27
Identities = 33/101 (32%), Positives = 40/101 (39%), Gaps = 22/101 (21%)
Query: 47 GEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCV--KCSAWVGTCFPLSL 104
GE PP G SP P + G+ + P G C+ CS +GT S
Sbjct: 43 GEPPPPGEFSP--PGD---------------GSSTLPGGDPACLLKSCSPGLGT--RSSP 83
Query: 105 LQAAGGPT-GSPNGFCPEPWAPDHASTLHGLNKSLRQGPRS 144
A GG T GSP PEP AP + + L GP S
Sbjct: 84 AAAGGGATSGSPRVVTPEPAAPATQVSWPPSSARLLAGPAS 124
>gi|239744954 PREDICTED: hypothetical protein XP_002343343 [Homo
sapiens]
Length = 194
Score = 32.7 bits (73), Expect = 0.27
Identities = 33/101 (32%), Positives = 40/101 (39%), Gaps = 22/101 (21%)
Query: 47 GEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPPGPAPCV--KCSAWVGTCFPLSL 104
GE PP G SP P + G+ + P G C+ CS +GT S
Sbjct: 43 GEPPPPGEFSP--PGD---------------GSSTLPGGDPACLLKSCSPGLGT--RSSP 83
Query: 105 LQAAGGPT-GSPNGFCPEPWAPDHASTLHGLNKSLRQGPRS 144
A GG T GSP PEP AP + + L GP S
Sbjct: 84 AAAGGGATSGSPRVVTPEPAAPATQVSWPPSSARLLAGPAS 124
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 32.7 bits (73), Expect = 0.27
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 79 AGSSPPGPA--PCVKCSAWVGTCFPLSL--LQAAGGPTGSPNGFCPEPWAPDHAS---TL 131
A PPGPA P +A V T L L AAG P P G P P +P S +
Sbjct: 719 APPGPPGPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSGSG 778
Query: 132 HGLNKSLRQGPRSGG---AQRKPRAHTGEGVSGLSLTQPRLSSSLRISWHLL 180
GL + GP + G +KPR G +L ++ R+S+H L
Sbjct: 779 PGLAPARSPGPAADGPIDLSKKPRRPL-PGAPAPALADYHECTACRVSFHSL 829
>gi|169210223 PREDICTED: hypothetical protein [Homo sapiens]
Length = 66
Score = 32.3 bits (72), Expect = 0.35
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 37 ARACAPGRHSGEGPPQGNLSPSCPAE----AGHGCASTGRQVGVSGAGSSPPG 85
+R A R E P Q CPA+ AGH +S GRQ G G ++PPG
Sbjct: 15 SREGAEDRAPQEAPAQEGPPDKCPAQFHGGAGHQ-SSRGRQQGPEGTQNNPPG 66
>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
Length = 218
Score = 32.3 bits (72), Expect = 0.35
Identities = 34/135 (25%), Positives = 43/135 (31%), Gaps = 20/135 (14%)
Query: 29 SPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSGAGSSPPG-PA 87
+PPG + RH PP G S S P AG C +T PG P
Sbjct: 18 APPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATPEPARAPSIAEPGPGIPV 77
Query: 88 PCVKCSAWVGTCFPLSLLQAAGGPTGS---------PNGFCPEPWAPDHASTLHGLNKSL 138
+K P+ +L GG TG+ G C P S +
Sbjct: 78 AAIK---------PV-ILPGGGGCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREA 127
Query: 139 RQGPRSGGAQRKPRA 153
R G G P+A
Sbjct: 128 RPGGPQAGRAGDPKA 142
>gi|169210432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 66
Score = 32.3 bits (72), Expect = 0.35
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 37 ARACAPGRHSGEGPPQGNLSPSCPAE----AGHGCASTGRQVGVSGAGSSPPG 85
+R A R E P Q CPA+ AGH +S GRQ G G ++PPG
Sbjct: 15 SREGAEDRAPQEAPAQEGPPDKCPAQFHGGAGHQ-SSRGRQQGPEGTQNNPPG 66
>gi|169209908 PREDICTED: hypothetical protein [Homo sapiens]
Length = 66
Score = 32.3 bits (72), Expect = 0.35
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 37 ARACAPGRHSGEGPPQGNLSPSCPAE----AGHGCASTGRQVGVSGAGSSPPG 85
+R A R E P Q CPA+ AGH +S GRQ G G ++PPG
Sbjct: 15 SREGAEDRAPQEAPAQEGPPDKCPAQFHGGAGHQ-SSRGRQQGPEGTQNNPPG 66
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 32.3 bits (72), Expect = 0.35
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 19 SVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCASTGRQVGVSG 78
+ GG+ + + + RA P R SGE P G S P EAG G +G +G
Sbjct: 1775 TTGGVDAATTGAASENTSERAGTP-RVSGETPAVGG--GSTPGEAGPGATVSGSTGVSAG 1831
Query: 79 AGSSPPGPAPCVKCSAWVGTCFPLSLLQAAGGPTGS 114
+ ++ PG + S+ GT P + GG TG+
Sbjct: 1832 SITASPGASATSSESSKSGTTGP-----SVGGKTGA 1862
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,456,703
Number of Sequences: 37866
Number of extensions: 780323
Number of successful extensions: 2733
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 2568
Number of HSP's gapped (non-prelim): 358
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.