Search of human proteins with 239750966

Search of human proteins with 239750966

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
         (261 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ...   547   e-156
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ...   547   e-156
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             54   1e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    54   1e-07
gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]            54   1e-07
gi|169211910 PREDICTED: hypothetical protein [Homo sapiens]            54   1e-07
gi|169211055 PREDICTED: hypothetical protein [Homo sapiens]            54   1e-07
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     53   2e-07
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         53   3e-07
gi|153792074 proline rich 12 [Homo sapiens]                            53   3e-07
gi|24797153 faciogenital dysplasia protein [Homo sapiens]              52   4e-07
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]            50   3e-06
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]            50   3e-06
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]             50   3e-06
gi|92859678 small nuclear RNA activating complex, polypeptide 4,...    49   3e-06
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            49   6e-06
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     49   6e-06
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]    49   6e-06
gi|33286436 gametogenetin [Homo sapiens]                               48   8e-06
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         47   1e-05
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       47   2e-05
gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Ho...    47   2e-05
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]    47   2e-05
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]    47   2e-05
gi|157168329 formin 1 [Homo sapiens]                                   46   3e-05
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    46   3e-05
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    46   3e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    46   4e-05
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]            45   5e-05
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ...    45   5e-05

>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
           sapiens]
          Length = 261

 Score =  547 bits (1409), Expect = e-156
 Identities = 261/261 (100%), Positives = 261/261 (100%)

Query: 1   MSVPRRNRCRAFTQKPTNHRKDQSPANKAQVQQHRAPAVADAADLLEAHIEQQEGGAGEE 60
           MSVPRRNRCRAFTQKPTNHRKDQSPANKAQVQQHRAPAVADAADLLEAHIEQQEGGAGEE
Sbjct: 1   MSVPRRNRCRAFTQKPTNHRKDQSPANKAQVQQHRAPAVADAADLLEAHIEQQEGGAGEE 60

Query: 61  GSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKA 120
           GSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKA
Sbjct: 61  GSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKA 120

Query: 121 HGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPL 180
           HGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPL
Sbjct: 121 HGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPL 180

Query: 181 PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETIL 240
           PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETIL
Sbjct: 181 PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETIL 240

Query: 241 RNPPARSPGAGWGSGAGRRLC 261
           RNPPARSPGAGWGSGAGRRLC
Sbjct: 241 RNPPARSPGAGWGSGAGRRLC 261


>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
           sapiens]
          Length = 261

 Score =  547 bits (1409), Expect = e-156
 Identities = 261/261 (100%), Positives = 261/261 (100%)

Query: 1   MSVPRRNRCRAFTQKPTNHRKDQSPANKAQVQQHRAPAVADAADLLEAHIEQQEGGAGEE 60
           MSVPRRNRCRAFTQKPTNHRKDQSPANKAQVQQHRAPAVADAADLLEAHIEQQEGGAGEE
Sbjct: 1   MSVPRRNRCRAFTQKPTNHRKDQSPANKAQVQQHRAPAVADAADLLEAHIEQQEGGAGEE 60

Query: 61  GSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKA 120
           GSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKA
Sbjct: 61  GSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKA 120

Query: 121 HGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPL 180
           HGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPL
Sbjct: 121 HGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPL 180

Query: 181 PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETIL 240
           PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETIL
Sbjct: 181 PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETIL 240

Query: 241 RNPPARSPGAGWGSGAGRRLC 261
           RNPPARSPGAGWGSGAGRRLC
Sbjct: 241 RNPPARSPGAGWGSGAGRRLC 261


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 41/110 (37%), Positives = 47/110 (42%), Gaps = 23/110 (20%)

Query: 157 GRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSS 216
           GR  P P P+PL +    PT +  PPPG           RGG  P PP  + R+GP P  
Sbjct: 337 GRSGPLP-PVPLGIAPPPPTPRGPPPPG-----------RGGPPPPPPPATGRSGPLPPP 384

Query: 217 PSAA--PTSHPPPSPACP------GPEMETILRNPPARSPGAGWGSGAGR 258
           P  A  P   PPP P  P      GP    +   PPA  P  G   G GR
Sbjct: 385 PPGAGGPPMPPPPPPPPPPPSSGNGPAPPPL---PPALVPAGGLAPGGGR 431



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 36/102 (35%), Positives = 39/102 (38%), Gaps = 27/102 (26%)

Query: 178 QPLPPP-----GSARRPRR----GRAGRG--------GAAPAPPT-----GSMRAGPGPS 215
           +PLPPP     G  + PR     G  GR         G AP PPT        R GP P 
Sbjct: 311 EPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPP 370

Query: 216 SPSAAPTSH--PPPSPACPGPEMETILRNPPARSPGAGWGSG 255
            P A   S   PPP P   GP M      PP   P    G+G
Sbjct: 371 PPPATGRSGPLPPPPPGAGGPPMPP---PPPPPPPPPSSGNG 409


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 56/180 (31%), Positives = 66/180 (36%), Gaps = 24/180 (13%)

Query: 81  AQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKAHGVQGGPCAARAEGGAL--H 138
           +QL A+   H  L    PE      +R      LG     H V G P  A   G A    
Sbjct: 31  SQLAASAAHHHHLAPRTPE------VRAAAAGALGN----HVVSGSPAGAAGAGPAAPAE 80

Query: 139 GRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGG 198
           G PG    P     A P G    RP P P     ++P   P PP    R P  G AG   
Sbjct: 81  GAPGAAPEPPPAGRARPGGGGPQRPGP-PSPRRPLVPA-GPAPPAAKLRPPPEGSAG--S 136

Query: 199 AAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPGAGWGSGAGR 258
            AP P   ++ AGP P+    A  + P    A  GP         P   PG G G G G+
Sbjct: 137 CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP--------GPGPGPGPGPGPGPGK 188



 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 64/210 (30%), Positives = 77/210 (36%), Gaps = 40/210 (19%)

Query: 58  GEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPP 117
           G  GS A   A AA A  P    A      G        GP  G G      P  G GP 
Sbjct: 132 GSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGP----GPGPGPGPG 187

Query: 118 RKAHGVQGGPCAARA-EGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPT 176
           + A     GP AA+   G A        A P   +S   +G     PLP P     ++ T
Sbjct: 188 KPA-----GPGAAQTLNGSAALLNSHHAAAP--AVSLVNNGPAALLPLPKPAAPGTVIQT 240

Query: 177 LQPLPPP--GSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPAC--- 231
                PP  G+A  P         AAP+PP     A P P++P+AAP   PPP+PA    
Sbjct: 241 -----PPFVGAAAPP-------APAAPSPP-----AAPAPAAPAAAPPP-PPPAPATLAR 282

Query: 232 -----PGPEMETILRNPPARSPGAGWGSGA 256
                 GP        PPA +   G    A
Sbjct: 283 PPGHPAGPPTAAPAVPPPAAAQNGGSAGAA 312



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 5/118 (4%)

Query: 134 GGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARR-PRRG 192
           G A    P   + P     A P+  P P P   P    L  P   P  PP +A   P   
Sbjct: 245 GAAAPPAPAAPSPPAAPAPAAPAAAPPPPP---PAPATLARPPGHPAGPPTAAPAVPPPA 301

Query: 193 RAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPGA 250
            A  GG+A A P  +  AG GP+  S  P      +   PG + E+  R   A  P A
Sbjct: 302 AAQNGGSAGAAPAPAPAAG-GPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAA 358



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 45/160 (28%), Positives = 55/160 (34%), Gaps = 33/160 (20%)

Query: 106 LRRDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLP 165
           L R P    GPP  A  V   P AA   GG+    P     P     A  SG+P P    
Sbjct: 280 LARPPGHPAGPPTAAPAVP--PPAAAQNGGSAGAAPA--PAPAAGGPAGVSGQPGPG--- 332

Query: 166 LPLMLMLMLPTLQPLPPPG-SARRPRRGRAGRGGAA-------PAPPTGSMRAGPGPSSP 217
                          P PG  A  P+R       AA       PA    SM  GP     
Sbjct: 333 ----------AAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGA 382

Query: 218 SAAPTSHPPPSPACP--------GPEMETILRNPPARSPG 249
             +P + PPP+P  P        G   +++ R P A + G
Sbjct: 383 LPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSG 422


>gi|169211438 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 200

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 57/167 (34%), Positives = 69/167 (41%), Gaps = 28/167 (16%)

Query: 101 GDGEHLRRDPEQGL-GPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGR- 158
           G+G   RR+ E G  G PR+   +  GP A R E     GRP        LL   P    
Sbjct: 15  GEGSETRRELELGYRGTPRRPPPLPPGPQAWRGE--QRRGRP--------LLGRAPRASV 64

Query: 159 PRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAP--------PTGSMRA 210
           P PR  P    L+ +       P P SA R R G AGRG  A +P         T + RA
Sbjct: 65  PAPRAFP---NLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRA 121

Query: 211 GPGPSSPSAAPTSHPPPSPACPG-PEMETILRNPPARSPGAGWGSGA 256
            P     S  P + P P  ACPG P +  +   P    PG G G G+
Sbjct: 122 RPRIGCHSQPPRAAPKPR-ACPGFPALRKVCALP---CPGRGHGLGS 164


>gi|169211910 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 200

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 57/167 (34%), Positives = 69/167 (41%), Gaps = 28/167 (16%)

Query: 101 GDGEHLRRDPEQGL-GPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGR- 158
           G+G   RR+ E G  G PR+   +  GP A R E     GRP        LL   P    
Sbjct: 15  GEGSETRRELELGYRGTPRRPPPLPPGPQAWRGE--QRRGRP--------LLGRAPRASV 64

Query: 159 PRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAP--------PTGSMRA 210
           P PR  P    L+ +       P P SA R R G AGRG  A +P         T + RA
Sbjct: 65  PAPRAFP---NLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRA 121

Query: 211 GPGPSSPSAAPTSHPPPSPACPG-PEMETILRNPPARSPGAGWGSGA 256
            P     S  P + P P  ACPG P +  +   P    PG G G G+
Sbjct: 122 RPRIGCHSQPPRAAPKPR-ACPGFPALRKVCALP---CPGRGHGLGS 164


>gi|169211055 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 200

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 57/167 (34%), Positives = 69/167 (41%), Gaps = 28/167 (16%)

Query: 101 GDGEHLRRDPEQGL-GPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGR- 158
           G+G   RR+ E G  G PR+   +  GP A R E     GRP        LL   P    
Sbjct: 15  GEGSETRRELELGYRGTPRRPPPLPPGPQAWRGE--QRRGRP--------LLGRAPRASV 64

Query: 159 PRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAP--------PTGSMRA 210
           P PR  P    L+ +       P P SA R R G AGRG  A +P         T + RA
Sbjct: 65  PAPRAFP---NLVTLGGGCASRPSPSSALRVRAGWAGRGAIAGSPSLRPCDLGATEATRA 121

Query: 211 GPGPSSPSAAPTSHPPPSPACPG-PEMETILRNPPARSPGAGWGSGA 256
            P     S  P + P P  ACPG P +  +   P    PG G G G+
Sbjct: 122 RPRIGCHSQPPRAAPKPR-ACPGFPALRKVCALP---CPGRGHGLGS 164


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 39/102 (38%), Positives = 45/102 (44%), Gaps = 15/102 (14%)

Query: 153 ACPSGRPR-PRPLPLPLMLMLMLPTLQPLPPPG--SARRPRRGRAGRGGAAPAPPTGSMR 209
           A P   PR PR  P         PT  P PPP   +A  P R       AA APP+    
Sbjct: 106 ATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPG-P 164

Query: 210 AGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPGAG 251
           A PGP +  AAP + PPP+PA            PPA +P AG
Sbjct: 165 AQPGPRAQRAAPLAAPPPAPAA-----------PPAVAPPAG 195



 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 48/159 (30%), Positives = 57/159 (35%), Gaps = 23/159 (14%)

Query: 110 PEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPR------- 162
           P +G  PP      +G P AA A   A    P     P  + +A P+  PR         
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAA--AAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159

Query: 163 PLPLPLMLMLMLPTLQPL--PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAA 220
           P P P           PL  PPP  A  P          A APP G  RA P P+  +  
Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPPPAPAAPP----------AVAPPAGPRRAPP-PAVAARE 208

Query: 221 PTSHPPPSPACPGPEMETILRNP-PARSPGAGWGSGAGR 258
           P   PPP P  P  + +     P P    GA    GA R
Sbjct: 209 PPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAAR 247



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 6/66 (9%)

Query: 185 SARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPP 244
           S R   R +  R GA P  P  + R  P  ++ +A P +  PP P  P      +    P
Sbjct: 92  SYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAP------VAAAAP 145

Query: 245 ARSPGA 250
           AR+P A
Sbjct: 146 ARAPRA 151



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 30/84 (35%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 124 QGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRP----RPLPLPLMLMLMLPTLQP 179
           Q GP A RA   A    P   A P     A P   P P    R  PLP       P  Q 
Sbjct: 166 QPGPRAQRAAPLAAPP-PAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQ 224

Query: 180 LPPPGSARRPRRGRAGRGGAAPAP 203
            PPP   + P  G A R G A  P
Sbjct: 225 QPPPPQPQPPPEGGAVRAGGAARP 248



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 23/66 (34%), Positives = 25/66 (37%), Gaps = 8/66 (12%)

Query: 181 PPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETIL 240
           P PGS  R     A           G+     GP SPS  P   PP  PA PG +  T  
Sbjct: 395 PAPGSGTRQVFSMAAMNKEG-----GTASVATGPDSPSPVPL--PPGKPALPGAD-GTPF 446

Query: 241 RNPPAR 246
             PP R
Sbjct: 447 GCPPGR 452


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 140 RPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLP--TLQPLPPPGSARRPRRGR---- 193
           RPG       L++    G   P PLP+P +L  +    T + + P  ++ RP   R    
Sbjct: 118 RPGESEDMLELVAEVRIGDRDPIPLPVPSLLPRLRAWRTGKTVSPQSNSSRPTCARHLTL 177

Query: 194 -AGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACP 232
             G GG AP P   S  + P PS  S++P+  PPP P  P
Sbjct: 178 GTGDGGPAPPPAPSSASSSPSPSPSSSSPSPPPPPPPPAP 217



 Score = 38.1 bits (87), Expect = 0.008
 Identities = 42/161 (26%), Positives = 58/161 (36%), Gaps = 44/161 (27%)

Query: 142 GRDARPWRLLSACPSGRPRPRPLPLPL------------------MLMLMLPTLQPLPPP 183
           GR ARP    SA P+ +P P+P P P                    L + L    P PP 
Sbjct: 414 GRAARPTPAASATPTAQPLPQP-PAPRAPEGDDFLSLHAESDGEGALQVDLGEPAPAPPA 472

Query: 184 GSAR-----------RPRRGRAGRGGAAPAP-PTGSMRAGP-------------GPSSPS 218
             +R             RR R  +   +PAP P  +  AGP             G +  +
Sbjct: 473 ADSRWGGLDLRRKILTQRRERYRQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEA 532

Query: 219 AAPTSHPPPSPACPGPEMETILRNPPARSPGAGWGSGAGRR 259
           A+ +S   P+P  P    ++       R PG+   S A RR
Sbjct: 533 ASSSSGTQPAPPAPASPWDSKKHRSRDRKPGSHASSSARRR 573



 Score = 28.9 bits (63), Expect = 4.7
 Identities = 42/168 (25%), Positives = 56/168 (33%), Gaps = 18/168 (10%)

Query: 51   EQQEGGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDP 110
            E++E    EE  E + + + A        AA    A        D G EDG    + + P
Sbjct: 1023 EEEEEEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQLP 1082

Query: 111  EQGLGPPRKAHGVQGGPCAA-----------RAEGGALHGRPGRDARPWRLLSACPSGRP 159
               L PP   +   G  C             + E   L  R    A+   L+ A      
Sbjct: 1083 T--LPPPMPWNLPAGVDCTTSGVLALTALLFKMEEANLASR----AKAQELIQATNQILS 1136

Query: 160  RPRPLPLPLMLMLMLPTLQPLPP-PGSARRPRRGRAGRGGAAPAPPTG 206
              +P     M    +PT   LPP P S   P     G  G+ P  PTG
Sbjct: 1137 HRKPPSSLGMTPAPVPTSLGLPPGPSSYLLPGSLPLGGCGSTPPTPTG 1184


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 45/157 (28%), Positives = 61/157 (38%), Gaps = 18/157 (11%)

Query: 83   LGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPP-RKAHGVQGGPCAARAEGGALHGRP 141
            L  ++   ++ +DD P  G      +D     GPP   A  V G P          +G P
Sbjct: 1394 LQESISSAISALDDPPLAGP-----KDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTP 1448

Query: 142  GR---DARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGG 198
                 + +P       P+ +P+P P P P    L  P     P P S   P         
Sbjct: 1449 EPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPP--------- 1499

Query: 199  AAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPE 235
              P PP  +M + P P  P+AAP + PP  PA P PE
Sbjct: 1500 PLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPE 1536



 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 59/226 (26%), Positives = 76/226 (33%), Gaps = 27/226 (11%)

Query: 54  EGGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQG 113
           +GG G     A R         P      LG     +      G     G+       QG
Sbjct: 393 KGGYGAAAGGATRPPPPRSTATP--KCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQG 450

Query: 114 L-GPPRKAHGVQGGPCAARAEGGALHGRPGR--DARPWRLLSACPSGRP----------R 160
           L GP     G  GG     ++  +  G P +     P   L+ C S  P          +
Sbjct: 451 LLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQ 510

Query: 161 PRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGP-----S 215
             P P P      LPT  P     +   P     G GG  P+   G   A P        
Sbjct: 511 GEPYPGPAAHSQGLPTASPSLSYSTGHSPALSGHG-GGWGPSSLGGGGEASPSHIIRPLQ 569

Query: 216 SPSAAPTSHPPP--SPACPGPEMETILRNPP-ARSPGAG-WGSGAG 257
           SP A  T  PP   SP  PG  + ++L + P    PGAG + +GAG
Sbjct: 570 SPPA--TGRPPGVGSPGAPGKYLSSVLASAPFLAPPGAGSYAAGAG 613



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 42/137 (30%), Positives = 49/137 (35%), Gaps = 26/137 (18%)

Query: 114  LGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLM 173
            L  P+      G P A  A   A+ G P     P    SA  +G P P     PL+    
Sbjct: 1410 LAGPKDTSTPDGPPLAPAA---AVPGPPPLPGLP----SANSNGTPEP-----PLLEEKP 1457

Query: 174  LPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPG 233
             PT    PPP    +P+          P PP     A P P  P  APT   PP P  P 
Sbjct: 1458 PPT----PPPAPTPQPQ---------PPPPPPPPQPALPSPP-PLVAPTPSSPPPPPLPP 1503

Query: 234  PEMETILRNPPARSPGA 250
            P    +   PP   P A
Sbjct: 1504 PPPPAMPSPPPPPPPAA 1520



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 39/142 (27%), Positives = 52/142 (36%), Gaps = 27/142 (19%)

Query: 107 RRDPEQGLGPPRKAHGVQGG----PCAARAEGGALHGRPGRD-ARPWRLLSACPSGRPRP 161
           R  PE+ L PP     + G     P A    G       G+D A  +R  S  P G   P
Sbjct: 867 RLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSEGKDPAGAYR--SPSPQGTKAP 924

Query: 162 RPLPLPLMLM----------LMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAG 211
           R +PL  +               PT++ +   G+A          G A P    G  +AG
Sbjct: 925 RFVPLTSICFPDSLLQDEERSFFPTMEEMFGGGAAD-------DYGKAGPPEDEGDPKAG 977

Query: 212 PGPSSPSAAPTSHPPPSPACPG 233
            GP      P ++ P  P CPG
Sbjct: 978 AGPPP---GPPAYDPYGPYCPG 996



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 203  PPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEME----TILRNPPARSP 248
            PP    R+G   +  SA  +S PPP    P P+ E    T    PP ++P
Sbjct: 1670 PPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTP 1719



 Score = 31.2 bits (69), Expect = 0.95
 Identities = 31/105 (29%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 158  RPRPRPLPLPLMLMLMLPTLQPL-------PPPGSARRPRRGRAGRGGAAPAPPTGSMRA 210
            R  PR LP  +      P L PL       P PG     RRGR          PT + R 
Sbjct: 1115 RLNPRRLPDLVSSCRSRPALSPLGDIDFCPPNPGPDGPRRRGRK---------PTKAKR- 1164

Query: 211  GPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPGAGWGSG 255
              GP  P   P   P   P   GP   +   +   +  G G G G
Sbjct: 1165 -DGPPRPRGRPRIRPLEVPTTAGPASASTPTDGAKKPRGRGRGRG 1208



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 195 GRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPGAGWGS 254
           G GG  P   +   + G G    +A   + PPP  +   P+ +++    PA +   G  S
Sbjct: 376 GGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQSL--GGPAAAYATGKAS 433

Query: 255 GAG 257
           GAG
Sbjct: 434 GAG 436



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 33/111 (29%)

Query: 97   GPEDGDGEHLRRDPEQGLGPPR--KAHGVQGGPCAARAEG--------GALHGRPGR--- 143
            GP + +G     DP+ G GPP    A+   G  C  RA G        G    +P     
Sbjct: 966  GPPEDEG-----DPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPS 1020

Query: 144  --DARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRG 192
              +A P  L+ + P     P P P P             PPP  A  P+ G
Sbjct: 1021 TVNAEPLGLIQSGPHQAAPPPPPPPP-------------PPPAPASEPKGG 1058



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 202  APPTGSMRAGPGPSSPSAAPTSHPPPSPA 230
            A P G +++GP  ++P   P   PPP+PA
Sbjct: 1024 AEPLGLIQSGPHQAAPPPPPPPPPPPAPA 1052



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 6/58 (10%)

Query: 155  PSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGP 212
            P GRPR RPL +P       P     P  G A++P RGR GRG    A   G  R  P
Sbjct: 1170 PRGRPRIRPLEVPTTAG---PASASTPTDG-AKKP-RGR-GRGRGRKAEEAGGTRLEP 1221



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 7/67 (10%)

Query: 182  PPGSARRPRRGRAG-RGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPS------PACPGP 234
            PP   RR  + +     G + APP  +    P P +P    +  PP        P  P P
Sbjct: 1670 PPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAP 1729

Query: 235  EMETILR 241
            E  ++LR
Sbjct: 1730 EKPSLLR 1736



 Score = 29.3 bits (64), Expect = 3.6
 Identities = 36/127 (28%), Positives = 44/127 (34%), Gaps = 12/127 (9%)

Query: 110 PEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLM 169
           P   L P   +H     P A++  G  L     RD  P       P   P P P+PL L 
Sbjct: 797 PPPQLLPSVLSHAPSPSPSASKV-GVHLLEPATRDGAP----QPPPPPPPPPPPMPLQLE 851

Query: 170 LMLMLPTLQP------LPPPGSARRPRRGRAGRGGAAPAPPT-GSMRAGPGPSSPSAAPT 222
             L    L+P      L P  S   P   +   G   P PP  G    GP  S       
Sbjct: 852 AHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNSEGKDPAG 911

Query: 223 SHPPPSP 229
           ++  PSP
Sbjct: 912 AYRSPSP 918



 Score = 28.5 bits (62), Expect = 6.2
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 10/78 (12%)

Query: 142  GRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPT-LQPLPPPGSARRPRRGRAGRGGAA 200
            GR  RP R L+   +G+P    LP         PT ++  PPP   ++  +   G   A 
Sbjct: 1762 GRQTRPERSLA---TGQPATSRLPKAR------PTKVKAEPPPKKRKKWLKEAGGNATAG 1812

Query: 201  PAPPTGSMRAGPGPSSPS 218
              PP  S  +   P +PS
Sbjct: 1813 GGPPGSSSDSESSPGAPS 1830


>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
          Length = 961

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 43/148 (29%), Positives = 60/148 (40%), Gaps = 15/148 (10%)

Query: 106 LRRDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLP 165
           L  DP Q L P  +      GP   R++ G     P +   P   L   P  +P+  P P
Sbjct: 115 LSLDPGQSLEPHPE------GPQRLRSDPGPPTETPSQRPSP---LKRAPGPKPQVPPKP 165

Query: 166 LPLMLMLMLPTLQPLPPPGSARRP-----RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAA 220
             L +  M P L+P+PPP S   P      +G A R  A+P+    S         P   
Sbjct: 166 SYLQMPRMPPPLEPIPPPPSRPLPADPRVAKGLAPRAEASPSSAAVSSLIEKFEREPVIV 225

Query: 221 PTSHPPPSPACPGPEMETILRNPPARSP 248
            +  P P P+ PGP    +L  P ++ P
Sbjct: 226 ASDRPVPGPS-PGPPEPVMLPQPTSQPP 252


>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 49/161 (30%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 108 RDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLP 167
           R     L PPR + G    P   R  G A    PG     WR LSA     PRP  L  P
Sbjct: 36  RHSASALRPPRLSRGKDLKPRCGR--GPAHSPDPGEGCEAWRRLSA--DRWPRPASLS-P 90

Query: 168 LMLMLMLPTLQPLP--------PPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSA 219
              +   P  +P P        P    R P RGR G    AP  P G+     G    + 
Sbjct: 91  RAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLS-QAPGRPLGACARAKGIRLVNP 149

Query: 220 APTSHPPPSPACPGPEMETILRNP-PARSPGAGWGSGAGRR 259
           +P   P P PA          R P  + +PG   G G+  R
Sbjct: 150 SPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAER 190



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 48/183 (26%), Positives = 64/183 (34%), Gaps = 38/183 (20%)

Query: 97  GPEDGDGE-----HLRRDPEQGLGPPRK-------AHGVQGGPCAARAEGGALHGRPGRD 144
           GP+ G G      H+ +D ++   PP           G  G       E      +    
Sbjct: 180 GPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239

Query: 145 ARPWRLLSACPSGRPRPRPL---------PLPLMLM-LMLPTLQPLPPPGSARR-----P 189
            RP    S+  S  P  RPL         PLP     L  P+ +P P  G  R      P
Sbjct: 240 TRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPP 299

Query: 190 RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPP--PSPA----CPGPEMETILRNP 243
           R    G      + P    R  P P +P+A P +  P  P+PA     PGP      + P
Sbjct: 300 RADTGGSSSGGCSGPDSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGPGP-----AQGP 354

Query: 244 PAR 246
           P+R
Sbjct: 355 PSR 357


>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 49/161 (30%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 108 RDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLP 167
           R     L PPR + G    P   R  G A    PG     WR LSA     PRP  L  P
Sbjct: 36  RHSASALRPPRLSRGKDLKPRCGR--GPAHSPDPGEGCEAWRRLSA--DRWPRPASLS-P 90

Query: 168 LMLMLMLPTLQPLP--------PPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSA 219
              +   P  +P P        P    R P RGR G    AP  P G+     G    + 
Sbjct: 91  RAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLS-QAPGRPLGACARAKGIRLVNP 149

Query: 220 APTSHPPPSPACPGPEMETILRNP-PARSPGAGWGSGAGRR 259
           +P   P P PA          R P  + +PG   G G+  R
Sbjct: 150 SPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAER 190



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 48/183 (26%), Positives = 64/183 (34%), Gaps = 38/183 (20%)

Query: 97  GPEDGDGE-----HLRRDPEQGLGPPRK-------AHGVQGGPCAARAEGGALHGRPGRD 144
           GP+ G G      H+ +D ++   PP           G  G       E      +    
Sbjct: 180 GPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239

Query: 145 ARPWRLLSACPSGRPRPRPL---------PLPLMLM-LMLPTLQPLPPPGSARR-----P 189
            RP    S+  S  P  RPL         PLP     L  P+ +P P  G  R      P
Sbjct: 240 TRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPP 299

Query: 190 RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPP--PSPA----CPGPEMETILRNP 243
           R    G      + P    R  P P +P+A P +  P  P+PA     PGP      + P
Sbjct: 300 RADTGGSSSGGCSGPDSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGPGP-----AQGP 354

Query: 244 PAR 246
           P+R
Sbjct: 355 PSR 357


>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 49/161 (30%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 108 RDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLP 167
           R     L PPR + G    P   R  G A    PG     WR LSA     PRP  L  P
Sbjct: 36  RHSASALRPPRLSRGKDLKPRCGR--GPAHSPDPGEGCEAWRRLSA--DRWPRPASLS-P 90

Query: 168 LMLMLMLPTLQPLP--------PPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSA 219
              +   P  +P P        P    R P RGR G    AP  P G+     G    + 
Sbjct: 91  RAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLS-QAPGRPLGACARAKGIRLVNP 149

Query: 220 APTSHPPPSPACPGPEMETILRNP-PARSPGAGWGSGAGRR 259
           +P   P P PA          R P  + +PG   G G+  R
Sbjct: 150 SPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAER 190



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 48/183 (26%), Positives = 64/183 (34%), Gaps = 38/183 (20%)

Query: 97  GPEDGDGE-----HLRRDPEQGLGPPRK-------AHGVQGGPCAARAEGGALHGRPGRD 144
           GP+ G G      H+ +D ++   PP           G  G       E      +    
Sbjct: 180 GPQKGRGSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239

Query: 145 ARPWRLLSACPSGRPRPRPL---------PLPLMLM-LMLPTLQPLPPPGSARR-----P 189
            RP    S+  S  P  RPL         PLP     L  P+ +P P  G  R      P
Sbjct: 240 TRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPP 299

Query: 190 RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPP--PSPA----CPGPEMETILRNP 243
           R    G      + P    R  P P +P+A P +  P  P+PA     PGP      + P
Sbjct: 300 RADTGGSSSGGCSGPDSKHRTLPAPPAPTAWPAAGAPGAPNPAESRRGPGP-----AQGP 354

Query: 244 PAR 246
           P+R
Sbjct: 355 PSR 357


>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
            190kDa [Homo sapiens]
          Length = 1469

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 58/209 (27%), Positives = 77/209 (36%), Gaps = 31/209 (14%)

Query: 58   GEEGSEAQRDAEAAGARVPVEHAAQLGA----AVGVHVALVDDGPEDGDGEHLRRDPEQG 113
            G  GS  +    A   R+    A  L      A G   A     P  G G+     PE G
Sbjct: 964  GTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPA-ASQAPALGPGQISVSCPESG 1022

Query: 114  LGPPRKAHGVQGGPCAARAEG-----GALHGRPGRDARPWRLLSACPSGRPR-PRPLPLP 167
            LG  +        P A+R +G       L   P     P + LS    G P     +PLP
Sbjct: 1023 LGQSQ-------APAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLP 1075

Query: 168  LMLMLMLPTLQPLPPPGSARRPR-RGRAGRGG--AAPAPPTGSMRAGPGPSSPSAAPTSH 224
            +  +L    L P+P P     PR  G  G  G  A   PP    RA  GP +P+ + +  
Sbjct: 1076 VTWVLTAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQ 1135

Query: 225  PP------PSPAC----PGPEMETILRNP 243
            PP      P P+C    P P    + ++P
Sbjct: 1136 PPANMNREPEPSCRTDTPAPPTHALSQSP 1164


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 55/172 (31%), Positives = 69/172 (40%), Gaps = 21/172 (12%)

Query: 65  QRDAEAAGARVPV------EHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPR 118
           QR     G RV V      E  + LG A GV     +     G+G   RRD   G GPP 
Sbjct: 4   QRRLRKEGPRVGVRKREEEEEKSSLGRAAGV-----ESRRRAGEGAAGRRDG--GWGPPG 56

Query: 119 KAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQ 178
            A   Q    A+   GG+      R+      L+A  +  P P    LP     +   L+
Sbjct: 57  GAGDHQTLQRASLLPGGSADKDQEREPS----LAARGTAPPAPPRQCLPTPCPPLGHGLR 112

Query: 179 PLPPPGSA--RRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPS 228
           P PPPG+   R PR    G  G  PAPP    R   GP+  +AA    P P+
Sbjct: 113 PRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPART--GPAGKAAADRGRPGPA 162



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 32/99 (32%), Positives = 38/99 (38%), Gaps = 18/99 (18%)

Query: 180 LPPPGSARRPRR---GRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHP-PPSPACP--- 232
           L P GSA + +      A RG A PAPP   +     P      P   P  P P CP   
Sbjct: 69  LLPGGSADKDQEREPSLAARGTAPPAPPRQCLPTPCPPLGHGLRPRPPPGTPPPRCPRTL 128

Query: 233 GPEMETILRNP---PARSPGAGW--------GSGAGRRL 260
            P    +   P   PAR+  AG         G  AGRR+
Sbjct: 129 APGPRGLFPAPPPAPARTGPAGKAAADRGRPGPAAGRRV 167


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 44/141 (31%), Positives = 48/141 (34%), Gaps = 22/141 (15%)

Query: 114 LGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLM 173
           LG P    G  GG     A G      PG    P     A P+ RP P P      L L 
Sbjct: 5   LGQPDGGGGGGGGGGGVGAAGE--DPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALRLA 62

Query: 174 LPTLQPLPPPGSARRPRRGRAGRGGAA-----------PAPPTGSMRAGPGPSSPSAAP- 221
           L  L  L   G+      G AG G AA           P PP G     P   +P+ AP 
Sbjct: 63  LDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVAPG 122

Query: 222 --------TSHPPPSPACPGP 234
                    S PPP P  P P
Sbjct: 123 SLPLLDPNASPPPPPPPRPSP 143



 Score = 34.3 bits (77), Expect = 0.11
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 6/52 (11%)

Query: 183 PGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSP-----SAAPTSHPPPSP 229
           P S  +P  G  G GG       G    GPGP+ P      AAP   PPP P
Sbjct: 2   PSSLGQPDGGGGGGGGGGGVGAAGE-DPGPGPAPPPEGAQEAAPAPRPPPEP 52



 Score = 28.5 bits (62), Expect = 6.2
 Identities = 50/205 (24%), Positives = 68/205 (33%), Gaps = 34/205 (16%)

Query: 42  AADLLEAHIEQQEGGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDG 101
           A + +EAHI  + G   + G ++  D  A G  V ++    LGAA  +     + G    
Sbjct: 330 AREEIEAHITLRTGAFTDAGPDS--DFHANGTDVCLD---LLGAAASLWAKTPNQGRRPP 384

Query: 102 DGEH-LRRDPEQGLGPPRKAH--GVQGGPC----------AARAEGGALHGRPGRDARPW 148
                LR D   G     +A   G +GGP           +    GG   G  G  A   
Sbjct: 385 TATAGLRGDTALGAPSAPEAFYAGSRGGPSVPDPGPASPYSGSGNGGFAFGAEGPGA--- 441

Query: 149 RLLSACPSGRPRPRPLPLP-----LMLMLMLPTLQPLPPPGSARRPRRGRAGRG--GAAP 201
                 P G   P           L L L +P    +  P     P    +G      AP
Sbjct: 442 ------PVGTAAPDDCDFGFDFDFLALDLTVPAAATIWAPFERAAPLPAFSGCSTVNGAP 495

Query: 202 APPTGSMRAGPGPSSPSAAPTSHPP 226
            PP    R   G  +P  +PT   P
Sbjct: 496 GPPAAGARRSSGAGTPRHSPTLPEP 520


>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
          Length = 1603

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 38/112 (33%), Positives = 42/112 (37%), Gaps = 30/112 (26%)

Query: 141 PGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRP----------- 189
           PGR   P + L  CP   P            L L    P  PPG    P           
Sbjct: 344 PGRRLEPQQPLGHCPLAEP------------LRLDLCSPHGPPGPEGHPKYALRRTDRPK 391

Query: 190 ---RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAA----PTSHPPPSPACPGP 234
              RR +AGRG  A A P G +   P P+   AA    P   PPP PA PGP
Sbjct: 392 ILCRRRKAGRGRKADAGPEGRLLPLPMPTGLVAALAEPPPPPPPPPPALPGP 443



 Score = 30.4 bits (67), Expect = 1.6
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 11/110 (10%)

Query: 130 ARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRP 189
           +R   G   G P       R L+  PS   +  P+ +        P+ QP+        P
Sbjct: 864 SRKASGTYAGPPTSALPAQRGLATFPSRGAKASPVAVGSSGAGADPSFQPVLSARQTFPP 923

Query: 190 RRGRAGRGGAAPAPPTGSMRAG-------PGPSSPSAAPTSHPPPSPACP 232
             GRA   G  PA      RA        P PS+ + +PT+HPP +   P
Sbjct: 924 --GRAASYGLTPA--ASDCRAAETFPKLVPPPSAMARSPTTHPPANTYLP 969



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 38/135 (28%), Positives = 47/135 (34%), Gaps = 36/135 (26%)

Query: 107 RRDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPG----RDARPWRLLSACPSGRPRPR 162
           R +P+Q LG    A  ++   C+     G   G P     R  RP  L     +GR R  
Sbjct: 347 RLEPQQPLGHCPLAEPLRLDLCSPHGPPGP-EGHPKYALRRTDRPKILCRRRKAGRGRKA 405

Query: 163 ---------PLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPG 213
                    PLP+P  L+  L   +P PPP                   PP      GPG
Sbjct: 406 DAGPEGRLLPLPMPTGLVAAL--AEPPPPP-------------------PPPPPALPGPG 444

Query: 214 P-SSPSAAPTSHPPP 227
           P S P   P S   P
Sbjct: 445 PVSVPELKPESSQTP 459


>gi|33286436 gametogenetin [Homo sapiens]
          Length = 652

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 67/240 (27%), Positives = 89/240 (37%), Gaps = 40/240 (16%)

Query: 51  EQQEGGAGE-EGSEAQRDAEAAGARV--PVEHAAQLGAAVGVHVALVDDGPEDGDGEHLR 107
           ++ EGG G+ EG      A A+ AR   P  +    G+          DGPE     H R
Sbjct: 310 QEAEGGDGDGEGCSGPPSAPASQARALPPPPYTTFPGSKPKFDWVSAPDGPE----RHFR 365

Query: 108 -RDPEQGLGPPRKAHGVQGGPCAA--------RAEGGALHGRPGRDARPWRLLSACPSGR 158
                 G+G PR+      GP  +         +  G     P   A P  +  A  +G 
Sbjct: 366 FNGAGGGIGAPRRRAAALSGPWGSPPPPPEQIHSAPGPRRPAPALLAPPTFIFPAPTNGE 425

Query: 159 PR-------------PRPLPLPLMLMLMLPTLQPLP----PPGSARRPRRGRAGRGGAAP 201
           P              P P P P    L  P LQP P    PP +     +  A    AAP
Sbjct: 426 PMRPGPPGLQELPPLPPPTPPPT---LQPPALQPTPLPVAPPLTPGLGHKESALAPTAAP 482

Query: 202 A-PPTGSMRAGPGPSSPSAAPT-SHPPPSPACPGPEMETILRNPPARSPGAGWGSGAGRR 259
           A PP  +    P PS P+ APT + P P  + P P    I +    R+ G+    GA R+
Sbjct: 483 ALPPALAADQAPAPS-PAPAPTVAEPSPPVSAPAPAAAPI-KTRTRRNKGSRAARGATRK 540



 Score = 33.5 bits (75), Expect = 0.19
 Identities = 31/103 (30%), Positives = 38/103 (36%), Gaps = 6/103 (5%)

Query: 131 RAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPR 190
           R +G     RP +   P R LS   +    P   P PL       T +P PP  S R+P 
Sbjct: 131 RGQGDPPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPL------ETWKPPPPLPSERQPA 184

Query: 191 RGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPG 233
             R     A PA P    +AGP     +A       P  A  G
Sbjct: 185 DRRITPALATPASPPTESQAGPRNQGQTAGRARGGAPPHAGEG 227



 Score = 33.1 bits (74), Expect = 0.25
 Identities = 31/89 (34%), Positives = 36/89 (40%), Gaps = 16/89 (17%)

Query: 182 PPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSH-----PPPSPACPGPEM 236
           PPG+AR    G   RG        G    G G S P +AP S      PPP    PG + 
Sbjct: 295 PPGAARP--LGEVSRGAQEAEGGDGD---GEGCSGPPSAPASQARALPPPPYTTFPGSKP 349

Query: 237 ETILRNPP------ARSPGAGWGSGAGRR 259
           +    + P       R  GAG G GA RR
Sbjct: 350 KFDWVSAPDGPERHFRFNGAGGGIGAPRR 378



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 17/48 (35%), Positives = 20/48 (41%)

Query: 202 APPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPG 249
           A P G M      +SPS  P +   PSP  P PE    +  PP    G
Sbjct: 55  ATPPGLMVPREPQASPSTLPLTLERPSPVMPPPEEAAAVSAPPPAPAG 102


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 24/108 (22%)

Query: 156 SGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPS 215
           S  P P P P P    +     +P PPPG A         +    PAPP         P+
Sbjct: 603 SSSPSPSPTPSPHRPSIRTKG-EPAPPPGKAGE-------KSVKKPAPP---------PA 645

Query: 216 SPSAAPTSHPPPSPACPGPEMETILRNPPARSP-------GAGWGSGA 256
            P A  T+ P P P  PG   E   +  PAR+P       G+G GSG+
Sbjct: 646 PPQATKTTAPVPEPTKPGDPREARRKERPARTPPRRRTLSGSGSGSGS 693


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 45/139 (32%), Positives = 52/139 (37%), Gaps = 12/139 (8%)

Query: 97   GPEDGDGEHLRRDPEQGLGPPRKAHGVQGGPCAARAEGG----ALHGRPGRDARPWRLLS 152
            GP+   GE          GPP    G QG P  A  EG        G PG+D  P     
Sbjct: 1000 GPQGPTGETGPMGERGHPGPPGPP-GEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGL--- 1055

Query: 153  ACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRP-RRGRAGRGGAAPAPPTGSMRAG 211
                G P  R LP P+  + +     P  PPG A  P  RG AG  G    P     +  
Sbjct: 1056 ---RGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGP 1112

Query: 212  PGPSSPSAAPTSHPPPSPA 230
            PGP+    AP    P  PA
Sbjct: 1113 PGPAGEKGAPGEKGPQGPA 1131



 Score = 36.2 bits (82), Expect = 0.030
 Identities = 54/193 (27%), Positives = 69/193 (35%), Gaps = 53/193 (27%)

Query: 55   GGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGL 114
            G AGE+G+  ++  +    R  ++    L    G     V    EDGD   +    ++G 
Sbjct: 1114 GPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGP----VGPPGEDGDKGEIGEPGQKGS 1169

Query: 115  -------GPPRKAHGVQG-----GPCAARAEGG-----ALHGRPGRDARPWRLLSACPSG 157
                   GPP    G QG     GP  A  E G      L G+ G +          P G
Sbjct: 1170 KGDKGEQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG---------PRG 1219

Query: 158  RPRPRPLPLPLMLMLMLPTLQPLP-PPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSS 216
             P P   P P+        LQ LP PPG      +G  G  G    P        PGP  
Sbjct: 1220 FPGP---PGPV-------GLQGLPGPPGE-----KGETGDVGQMGPP------GPPGPRG 1258

Query: 217  PSAAPTSHPPPSP 229
            PS AP +  P  P
Sbjct: 1259 PSGAPGADGPQGP 1271



 Score = 35.8 bits (81), Expect = 0.039
 Identities = 52/180 (28%), Positives = 63/180 (35%), Gaps = 42/180 (23%)

Query: 94   VDDGPEDGDGEHLRRDPEQGLGPPRKAHGVQG--GPCAARAEGGALHGRPGRDARPWRLL 151
            V +  E G+        E G   P+   G +G  GP  A    G   G PG D       
Sbjct: 1281 VGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGP-KGPPGDDG------ 1333

Query: 152  SACPSGRPRPRPLPLPLMLMLMLPTLQPLP-----PPGSARRPRRGRAGRGGAAPAP-PT 205
               P G P P   P         P  +P P     PPG      +G  G  G   +P PT
Sbjct: 1334 ---PKGSPGPVGFPGDPG-----PPGEPGPAGQDGPPGD-----KGDDGEPGQTGSPGPT 1380

Query: 206  GSMRAGPGPSSPSAAPTSHPPPSPACP-------GPEMETILRNPPARSPGAGWGSGAGR 258
            G     PGPS P   P    PP PA P       G + E  L  PP ++   G     G+
Sbjct: 1381 GE----PGPSGP---PGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGK 1433



 Score = 34.3 bits (77), Expect = 0.11
 Identities = 58/225 (25%), Positives = 70/225 (31%), Gaps = 37/225 (16%)

Query: 16  PTNHRKDQSPANKAQVQQHRAPAVADAADLLEAHIEQQEGGAGEEGSEAQRDAEA-AGAR 74
           P   R  Q P   A     R  A +D A           G  G+ G +  R  +  AG  
Sbjct: 590 PQGPRGVQGPPGPAGKPGRRGRAGSDGA----------RGMPGQTGPKGDRGFDGLAGLP 639

Query: 75  VPVEHAAQLGAAVGVHVALVDDGPEDGDGE----HLRRDP-EQGLGPPRKAHGVQGGPCA 129
               H    G + G      DDG    DGE     L  +P  +GL  P+   G  G P  
Sbjct: 640 GEKGHRGDPGPS-GPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPP-- 696

Query: 130 ARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRP 189
                    G  G D +P    +  P G P P             P  Q LP P  A  P
Sbjct: 697 ---------GVTGMDGQPGPKGNVGPQGEPGPPG-------QQGNPGAQGLPGPQGAIGP 740

Query: 190 --RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACP 232
              +G  G+ G    P        PG   P        PP P  P
Sbjct: 741 PGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGP 785



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 50/188 (26%), Positives = 63/188 (33%), Gaps = 20/188 (10%)

Query: 53   QEGGAGEEGSEAQRDAEA-AGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPE 111
            ++G  GE G   Q+ ++   G + P           G    +   GP   DGE   R  +
Sbjct: 1154 EDGDKGEIGEPGQKGSKGDKGEQGPP-------GPTGPQGPIGQPGPSGADGEPGPRG-Q 1205

Query: 112  QGLGPPRKAHGVQGGPCAARAEG-GALHGRPGRDARPWRLLSACPSGRPRPR-PLPLPLM 169
            QGL   +   G +G P      G   L G PG       +    P G P PR P   P  
Sbjct: 1206 QGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAP-- 1263

Query: 170  LMLMLPTLQPLPPPGSARRPRR-GRAGRGGAAPAPPTGSMRAGPGPSSPSAAP-TSHPPP 227
                     P  PPG    P   G  G  G A  P        PGP         S P  
Sbjct: 1264 -----GADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSG 1318

Query: 228  SPACPGPE 235
            +   PGP+
Sbjct: 1319 AAGPPGPK 1326



 Score = 33.5 bits (75), Expect = 0.19
 Identities = 45/151 (29%), Positives = 54/151 (35%), Gaps = 27/151 (17%)

Query: 95  DDGPEDGDGEHLRRDPEQGLGPPRKAH--GVQGGPCAARAEG--GALHGRPGRDARPWRL 150
           +DGPE   G          LGPP +    GV G P     +G  G++ G PG        
Sbjct: 839 EDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSI-GFPGFPGANGEK 897

Query: 151 LSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPR--RGRAG----RGGAAPAPP 204
                 G+P PR    P               P   R PR   G+ G     GG  PA P
Sbjct: 898 GGRGTPGKPGPRGQRGPT-------------GPRGERGPRGITGKPGPKGNSGGDGPAGP 944

Query: 205 TGSMRAGPGPSSPSAAPTSHPPPSPACPGPE 235
            G  R   GP  P+  P    PP P  PG +
Sbjct: 945 PGE-RGPNGPQGPTGFPGPKGPPGP--PGKD 972



 Score = 32.7 bits (73), Expect = 0.33
 Identities = 45/182 (24%), Positives = 60/182 (32%), Gaps = 23/182 (12%)

Query: 61  GSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLGPPRKA 120
           G  A +D    G   P     Q G    +   ++ +GP   +G      P   +GP  + 
Sbjct: 433 GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQV 492

Query: 121 -----HGVQGGPCAARAEGGALHGRPGRDAR-PWRLLSACPSGRPRPRPLPLPLMLMLML 174
                 G  G P    A+G  L G PG     P+R      +G   P         M+  
Sbjct: 493 GDPGERGPPGRPGLPGADG--LPGPPGTMLMLPFRFGGGGDAGSKGP---------MVSA 541

Query: 175 PTLQPLPPPGSARRPRRGRAG------RGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPS 228
              Q       AR   RG AG      R G    P +G ++  PG   P        PP 
Sbjct: 542 QESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPG 601

Query: 229 PA 230
           PA
Sbjct: 602 PA 603



 Score = 32.7 bits (73), Expect = 0.33
 Identities = 30/92 (32%), Positives = 32/92 (34%), Gaps = 29/92 (31%)

Query: 182 PPGSARRP-RRGRAGRGGAAPAP----PTGSM--------------RAGPGPSSPSAAPT 222
           PPG A +P RRGRAG  GA   P    P G                R  PGPS P   P 
Sbjct: 599 PPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPG 658

Query: 223 SH----------PPPSPACPGPEMETILRNPP 244
                       P   P  PGP      + PP
Sbjct: 659 DDGERGDDGEVGPRGLPGEPGPRGLLGPKGPP 690



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 44/146 (30%), Positives = 53/146 (36%), Gaps = 16/146 (10%)

Query: 97   GPEDGDGEHLRRDPEQGL-GPPRKAH--GVQGGPCAARAEGGALHGRPGRDARPWRLLSA 153
            GPE   GE   +  E GL GPP K    G QG P     +G  L G PG         S 
Sbjct: 1399 GPEGRQGEKGAKG-EAGLEGPPGKTGPIGPQGAPGKPGPDG--LRGIPGPVGEQGLPGSP 1455

Query: 154  CPSGRPRPRPLP-LPLMLMLMLPTLQP--------LPPPGS-ARRPRRGRAGRGGAAPAP 203
             P G P P   P LP +     P  +         + PPG    +  RG  G  G++   
Sbjct: 1456 GPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPK 1515

Query: 204  PTGSMRAGPGPSSPSAAPTSHPPPSP 229
                +    GP  P   P    PP P
Sbjct: 1516 GEQGITGPSGPIGPPGPPGLPGPPGP 1541


>gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Homo
           sapiens]
          Length = 847

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 38/108 (35%), Positives = 45/108 (41%), Gaps = 18/108 (16%)

Query: 139 GRPGRDARPWRLLSACPSGRPRP-RPLPLPLMLM-LMLPTLQPLPPP-----------GS 185
           G PGR+          P+  P P  P P PL+   L  P   P P P            S
Sbjct: 665 GGPGRERGESPTTPPTPTPAPCPTEPPPSPLICFSLKTPDSPPTPAPLLLDLGIPVGQRS 724

Query: 186 ARRPRRGRAGRGGAAPAPPTGSMRAGPG----PSSPSAAPTSHPPPSP 229
           A+ PRR    RGG   +PP G+ R+ PG    P SP     S P PSP
Sbjct: 725 AKSPRREEEPRGGTV-SPPPGTSRSAPGTPGTPRSPPLGLISRPRPSP 771



 Score = 34.3 bits (77), Expect = 0.11
 Identities = 36/132 (27%), Positives = 43/132 (32%), Gaps = 13/132 (9%)

Query: 105 HLRRDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPR--PR 162
           +L  D    LG P     + G P     E       P    RP        SG P+   R
Sbjct: 591 YLDSDDSSPLGSPSTPPALNGNPPRPSLE-------PEEPKRPVPAERGSSSGTPKLIQR 643

Query: 163 PLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPT 222
            L     L+  L   + L PPG   R R    G     P  PT +      P SP    +
Sbjct: 644 ALLRGTALLASLGLGRDLQPPGGPGRER----GESPTTPPTPTPAPCPTEPPPSPLICFS 699

Query: 223 SHPPPSPACPGP 234
              P SP  P P
Sbjct: 700 LKTPDSPPTPAP 711



 Score = 28.5 bits (62), Expect = 6.2
 Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 116 PPRKAHGVQGGPCAARAEGGALHGRPGRDAR-----PWRLLSACPSGRPRPRPLPLP 167
           PP  +    G P   R+    L  RP          PW  +SA P   P P P P P
Sbjct: 742 PPGTSRSAPGTPGTPRSPPLGLISRPRPSPLRSRIDPWSFVSAGPRPSPLPSPQPAP 798


>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
          Length = 663

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 63/226 (27%), Positives = 77/226 (34%), Gaps = 45/226 (19%)

Query: 35  RAPAVADAADLLEAHIEQQEGGAGEE---GSEAQRDAEAAGARVPVEHAAQLGAAVGVHV 91
           R P     ADL  A ++  +   G     G  A     AA A + +     LGA  GV  
Sbjct: 32  RNPPALRLADLATAQVQPLQNMTGFPALAGPPAHSQLRAAVAHLRLR---DLGADPGV-- 86

Query: 92  ALVDDGPEDGDGEHLRRDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARP--WR 149
           A    GPE     H+ +    GL PP +A        AA A   AL   PG  + P    
Sbjct: 87  ATTPLGPE-----HMAQASTLGLSPPSQAFPAHPEAPAAAARAAALVAHPGAGSYPCGGG 141

Query: 150 LLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPR-----------RGRAGRGG 198
              A PS  P P P PLP       PT  P PPP     P             G +G+G 
Sbjct: 142 SSGAQPSAPPPPAP-PLP-------PTPSPPPPPPPPPPPALSGYTTTNSGGGGSSGKGH 193

Query: 199 A---------APAPPTGSMRAGP--GPSSPSAAPTSHPPPSPACPG 233
           +         +   P  +M   P  G          HP P P   G
Sbjct: 194 SRDFVLRRDLSATAPAAAMHGAPLGGEQRSGTGSPQHPAPPPHSAG 239



 Score = 32.3 bits (72), Expect = 0.43
 Identities = 54/214 (25%), Positives = 60/214 (28%), Gaps = 52/214 (24%)

Query: 46  LEAHIEQQEGGAGEEGSEAQRDAE-----AAGARVPVEHAAQLGAAVGVHVALVDDGPED 100
           L  +     GG G  G    RD       +A A     H A LG          +     
Sbjct: 175 LSGYTTTNSGGGGSSGKGHSRDFVLRRDLSATAPAAAMHGAPLGG---------EQRSGT 225

Query: 101 GDGEHLRRDPEQGLGPPRKAHGVQGGPCAARAEG--GALHGRPGRDARPWRLLSACPSGR 158
           G  +H    P    G    A G   GP  +       ALH  PG            P G 
Sbjct: 226 GSPQH-PAPPPHSAGMFISASGTYAGPDGSGGPALFPALHDTPG-----------APGGH 273

Query: 159 PRP----RPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTG-------- 206
           P P      L L          L     P  A  PR G A  G  A A            
Sbjct: 274 PHPLNGQMRLGLAAAAAAAAAELYGRAEPPFA--PRSGDAHYGAVAAAAAAALHGYGAVN 331

Query: 207 ----------SMRAGPGPSSPSAAPTSHPPPSPA 230
                     +  AGPGP     AP   PPP PA
Sbjct: 332 LNLNLAAAAAAAAAGPGPHLQHHAPPPAPPPPPA 365


>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
          Length = 955

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 46/132 (34%), Positives = 54/132 (40%), Gaps = 20/132 (15%)

Query: 109 DPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPL-PLP 167
           + +QGL P         G  A    G +LHG    D       S+CP G P   P  P+ 
Sbjct: 750 EEKQGLSPH--------GNVAFSKAGRSLHG----DTEAPVNCSSCP-GPPTASPSRPVL 796

Query: 168 LMLMLMLPT----LQPLPP-PGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPT 222
            +L L+L T     Q LP  P  A  P     G     P  P  S R  PGPS+P  APT
Sbjct: 797 HLLQLLLRTNLMKTQTLPTSPAGAHGPHSLALGLTATFPGEPGASPRLSPGPSTPPGAPT 856

Query: 223 SHPPPSPACPGP 234
             P  SP  P P
Sbjct: 857 L-PLASPGAPQP 867


>gi|157168329 formin 1 [Homo sapiens]
          Length = 1196

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 37/132 (28%), Positives = 48/132 (36%), Gaps = 20/132 (15%)

Query: 136 ALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQP------LPPPGSARRP 189
           AL    G  +   + L   P+  P P PLP  L  +   P + P      LPPP     P
Sbjct: 630 ALQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPP 689

Query: 190 RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPG 249
               +   G  P PP   +   P P +P   P + PPP  A P P             PG
Sbjct: 690 LPPPSS-AGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP-------------PG 735

Query: 250 AGWGSGAGRRLC 261
             +G G+    C
Sbjct: 736 LFFGLGSSSSQC 747



 Score = 33.5 bits (75), Expect = 0.19
 Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 145 ARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPP 204
           A P   +SA P   P P P P PL          P PPP     P       GG  PAPP
Sbjct: 668 APPMPPVSAGPP-LPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSP--APPNPGGPPPAPP 724

Query: 205 TGSMRAGPGP-------SSPSAAPTSHPPPSPACP 232
              +   P P       SS S  P   P   P+CP
Sbjct: 725 PPGLAPPPPPGLFFGLGSSSSQCPRK-PAIEPSCP 758



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 172 LMLPTLQPLPPPG------SARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHP 225
           L + +L  L PP       +A +P  G A     A  PP  S+   P   S   + +  P
Sbjct: 610 LNISSLSQLSPPNDHKDIHAALQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAP 669

Query: 226 PPSPACPGPEMETILRNPPARSPGAGWG 253
           P  P   GP +      PP   P +  G
Sbjct: 670 PMPPVSAGPPLPPPPPPPPPLPPPSSAG 697


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 66/213 (30%), Positives = 76/213 (35%), Gaps = 26/213 (12%)

Query: 55  GGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDD--GPEDGDGEHLRRDPEQ 112
           G AGEEG    R     G   P+    + GA         D   GP+   GE   R P  
Sbjct: 483 GPAGEEGKRGARGEP--GGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGE---RGPS- 536

Query: 113 GLGPPRKAHGVQGGPCAARAEGG-ALHGRPGRDARPWRLLSACPSGRPRP--RPLPLPLM 169
           GL  P+ A+G  G P      G   L GRPG DA P   +   PSG P    RP P    
Sbjct: 537 GLAGPKGANGDPGRPGEPGLPGARGLTGRPG-DAGPQGKVG--PSGAPGEDGRPGPPGPQ 593

Query: 170 LMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSP 229
                P +   P P  A     G  G+ G    P    +R  PG    + A     P  P
Sbjct: 594 GARGQPGVMGFPGPKGAN----GEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGP 649

Query: 230 A-------CPGPEMETILRNPPARSPGAGWGSG 255
           A        PGP     L  PP   PG G   G
Sbjct: 650 AGERGEQGAPGPSGFQGLPGPPG-PPGEGGKPG 681



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 57/216 (26%), Positives = 77/216 (35%), Gaps = 45/216 (20%)

Query: 55   GGAGEEGSEAQRDAE-------AAGARVPVEHAAQLGA--AVGVHVALVDDGPEDGDGEH 105
            G AGE G E    A+       AAG +        +GA  A G   +    GP    G+ 
Sbjct: 1029 GPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDR 1088

Query: 106  LRRDPEQGLGP--PRKAHGVQG--GPCAARAEGG--------------ALHGRPGRDARP 147
                 +  +GP  P  A G+QG  GP   + E G               L G PG     
Sbjct: 1089 GEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPS 1148

Query: 148  WRLLSACPSGRPRPRPLPLPLMLMLMLPTLQ--------PLPPPGSARRPRRGRAGRGGA 199
                ++ P+G   PR  P P+      P+ +        P+ PPG      RGR+G  G 
Sbjct: 1149 GDQGASGPAGPSGPRGPPGPVG-----PSGKDGANGIPGPIGPPGP-----RGRSGETGP 1198

Query: 200  APAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPE 235
            A  P        PGP  P    ++     P   GP+
Sbjct: 1199 AGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPD 1234



 Score = 38.1 bits (87), Expect = 0.008
 Identities = 63/223 (28%), Positives = 76/223 (34%), Gaps = 35/223 (15%)

Query: 55   GGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGL 114
            G AG  G++ Q      GA+     A Q G A          GP+   G    + P  G+
Sbjct: 834  GFAGPPGADGQ-----PGAKGEQGEAGQKGDAGA-------PGPQGPSGAPGPQGPT-GV 880

Query: 115  GPPRKAHGVQGGPCAARAEGGALH-GRPGRDARPWRLLSACPSGRPRPRPL--PLPLMLM 171
              P+ A G QG P A    G A   G PG +  P       PSG+  P+           
Sbjct: 881  TGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGR 940

Query: 172  LMLPTLQ-PLPPPGSARRPR-------------RGRAGRGGAAPAPPTGSMRAGPGPSSP 217
               P LQ P  PPG    P              +G AG+ G    P     R  PG   P
Sbjct: 941  AGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP 1000

Query: 218  SAAPTSHPPPSPA----CPGPEMETILRNPPARSPGAGWGSGA 256
            S  P     P  +     PGP     L   PA  PG     GA
Sbjct: 1001 SGEPGKQGAPGASGDRGPPGPVGPPGLTG-PAGEPGREGSPGA 1042



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 59/214 (27%), Positives = 74/214 (34%), Gaps = 61/214 (28%)

Query: 54  EGGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQG 113
           +G  G +G   +R A  AG   P      +G          + GPE   G+   R     
Sbjct: 743 QGPPGLQGMPGERGA--AGIAGPKGDRGDVG----------EKGPEGAPGKDGGRGLTGP 790

Query: 114 LGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLM 173
           +GPP        GP  A  E G + G PG         SA   G P  R    P      
Sbjct: 791 IGPP--------GPAGANGEKGEV-GPPGPAG------SAGARGAPGERGETGP------ 829

Query: 174 LPTLQPLP-----PPGSARRP----RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSH 224
                P P     PPG+  +P     +G AG+ G A A         PGP  PS AP   
Sbjct: 830 -----PGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGA---------PGPQGPSGAPGPQ 875

Query: 225 PPPSPACPGPEMETILRNPPARSPGAGWGSGAGR 258
            P      GP+     + PP      G+   AGR
Sbjct: 876 GP--TGVTGPKGARGAQGPPG---ATGFPGAAGR 904



 Score = 35.4 bits (80), Expect = 0.050
 Identities = 48/171 (28%), Positives = 57/171 (33%), Gaps = 29/171 (16%)

Query: 99  EDGDGEHLRRDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACP--- 155
           +DG+     +  E+G   P+ A G  G P     +G    G PG D       +  P   
Sbjct: 253 DDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGH--RGYPGLDGAKGE--AGAPGVK 308

Query: 156 --SGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGA-------APAPPTG 206
             SG P     P P+          P   PG   R R G AG  GA        PA P G
Sbjct: 309 GESGSPGENGSPGPM---------GPRGLPGE--RGRTGPAGAAGARGNDGQPGPAGPPG 357

Query: 207 SMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPAR--SPGAGWGSG 255
            +    GP  P A             GPE     R  P    SPG    SG
Sbjct: 358 PVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASG 408



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 53/169 (31%), Positives = 59/169 (34%), Gaps = 27/169 (15%)

Query: 55  GGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGL 114
           G AG  G++ Q     AG   PV  A   G   G   A  + GP    G      PE   
Sbjct: 339 GAAGARGNDGQPGP--AGPPGPVGPAGGPGFP-GAPGAKGEAGPTGARG------PEGAQ 389

Query: 115 GPPRKAHGVQGGPCAARAEGG-ALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLM 173
           GP R   G  G P  A A G     G PG          A   G P PR  P P      
Sbjct: 390 GP-RGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ----- 443

Query: 174 LPTLQPLPPPGSARRPRRGRAG-RGGAAPAPPTGSMRAGPGPSSPSAAP 221
                PL P G    P  G AG +G   P       +  PGP+ P  AP
Sbjct: 444 -GATGPLGPKGQTGEP--GIAGFKGEQGP-------KGEPGPAGPQGAP 482


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 66/213 (30%), Positives = 76/213 (35%), Gaps = 26/213 (12%)

Query: 55  GGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDD--GPEDGDGEHLRRDPEQ 112
           G AGEEG    R     G   P+    + GA         D   GP+   GE   R P  
Sbjct: 414 GPAGEEGKRGARGEP--GGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGE---RGPS- 467

Query: 113 GLGPPRKAHGVQGGPCAARAEGG-ALHGRPGRDARPWRLLSACPSGRPRP--RPLPLPLM 169
           GL  P+ A+G  G P      G   L GRPG DA P   +   PSG P    RP P    
Sbjct: 468 GLAGPKGANGDPGRPGEPGLPGARGLTGRPG-DAGPQGKVG--PSGAPGEDGRPGPPGPQ 524

Query: 170 LMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSP 229
                P +   P P  A     G  G+ G    P    +R  PG    + A     P  P
Sbjct: 525 GARGQPGVMGFPGPKGAN----GEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGP 580

Query: 230 A-------CPGPEMETILRNPPARSPGAGWGSG 255
           A        PGP     L  PP   PG G   G
Sbjct: 581 AGERGEQGAPGPSGFQGLPGPPG-PPGEGGKPG 612



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 57/216 (26%), Positives = 77/216 (35%), Gaps = 45/216 (20%)

Query: 55   GGAGEEGSEAQRDAE-------AAGARVPVEHAAQLGA--AVGVHVALVDDGPEDGDGEH 105
            G AGE G E    A+       AAG +        +GA  A G   +    GP    G+ 
Sbjct: 960  GPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDR 1019

Query: 106  LRRDPEQGLGP--PRKAHGVQG--GPCAARAEGG--------------ALHGRPGRDARP 147
                 +  +GP  P  A G+QG  GP   + E G               L G PG     
Sbjct: 1020 GEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPS 1079

Query: 148  WRLLSACPSGRPRPRPLPLPLMLMLMLPTLQ--------PLPPPGSARRPRRGRAGRGGA 199
                ++ P+G   PR  P P+      P+ +        P+ PPG      RGR+G  G 
Sbjct: 1080 GDQGASGPAGPSGPRGPPGPVG-----PSGKDGANGIPGPIGPPGP-----RGRSGETGP 1129

Query: 200  APAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPE 235
            A  P        PGP  P    ++     P   GP+
Sbjct: 1130 AGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPD 1165



 Score = 38.1 bits (87), Expect = 0.008
 Identities = 63/223 (28%), Positives = 76/223 (34%), Gaps = 35/223 (15%)

Query: 55  GGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGL 114
           G AG  G++ Q      GA+     A Q G A          GP+   G    + P  G+
Sbjct: 765 GFAGPPGADGQ-----PGAKGEQGEAGQKGDAGA-------PGPQGPSGAPGPQGPT-GV 811

Query: 115 GPPRKAHGVQGGPCAARAEGGALH-GRPGRDARPWRLLSACPSGRPRPRPL--PLPLMLM 171
             P+ A G QG P A    G A   G PG +  P       PSG+  P+           
Sbjct: 812 TGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGR 871

Query: 172 LMLPTLQ-PLPPPGSARRPR-------------RGRAGRGGAAPAPPTGSMRAGPGPSSP 217
              P LQ P  PPG    P              +G AG+ G    P     R  PG   P
Sbjct: 872 AGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP 931

Query: 218 SAAPTSHPPPSPA----CPGPEMETILRNPPARSPGAGWGSGA 256
           S  P     P  +     PGP     L   PA  PG     GA
Sbjct: 932 SGEPGKQGAPGASGDRGPPGPVGPPGLTG-PAGEPGREGSPGA 973



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 59/214 (27%), Positives = 74/214 (34%), Gaps = 61/214 (28%)

Query: 54  EGGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQG 113
           +G  G +G   +R A  AG   P      +G          + GPE   G+   R     
Sbjct: 674 QGPPGLQGMPGERGA--AGIAGPKGDRGDVG----------EKGPEGAPGKDGGRGLTGP 721

Query: 114 LGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLM 173
           +GPP        GP  A  E G + G PG         SA   G P  R    P      
Sbjct: 722 IGPP--------GPAGANGEKGEV-GPPGPAG------SAGARGAPGERGETGP------ 760

Query: 174 LPTLQPLP-----PPGSARRP----RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSH 224
                P P     PPG+  +P     +G AG+ G A A         PGP  PS AP   
Sbjct: 761 -----PGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGA---------PGPQGPSGAPGPQ 806

Query: 225 PPPSPACPGPEMETILRNPPARSPGAGWGSGAGR 258
            P      GP+     + PP      G+   AGR
Sbjct: 807 GP--TGVTGPKGARGAQGPPG---ATGFPGAAGR 835



 Score = 35.4 bits (80), Expect = 0.050
 Identities = 48/171 (28%), Positives = 57/171 (33%), Gaps = 29/171 (16%)

Query: 99  EDGDGEHLRRDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACP--- 155
           +DG+     +  E+G   P+ A G  G P     +G    G PG D       +  P   
Sbjct: 184 DDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGH--RGYPGLDGAKGE--AGAPGVK 239

Query: 156 --SGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGA-------APAPPTG 206
             SG P     P P+          P   PG   R R G AG  GA        PA P G
Sbjct: 240 GESGSPGENGSPGPM---------GPRGLPGE--RGRTGPAGAAGARGNDGQPGPAGPPG 288

Query: 207 SMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPAR--SPGAGWGSG 255
            +    GP  P A             GPE     R  P    SPG    SG
Sbjct: 289 PVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASG 339



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 53/169 (31%), Positives = 59/169 (34%), Gaps = 27/169 (15%)

Query: 55  GGAGEEGSEAQRDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGL 114
           G AG  G++ Q     AG   PV  A   G   G   A  + GP    G      PE   
Sbjct: 270 GAAGARGNDGQPGP--AGPPGPVGPAGGPGFP-GAPGAKGEAGPTGARG------PEGAQ 320

Query: 115 GPPRKAHGVQGGPCAARAEGG-ALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLM 173
           GP R   G  G P  A A G     G PG          A   G P PR  P P      
Sbjct: 321 GP-RGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ----- 374

Query: 174 LPTLQPLPPPGSARRPRRGRAG-RGGAAPAPPTGSMRAGPGPSSPSAAP 221
                PL P G    P  G AG +G   P       +  PGP+ P  AP
Sbjct: 375 -GATGPLGPKGQTGEP--GIAGFKGEQGP-------KGEPGPAGPQGAP 413


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 69/226 (30%), Positives = 87/226 (38%), Gaps = 56/226 (24%)

Query: 50  IEQQEGGAGEEGSEA-QRDAEAAGAR---------VPVEHAAQLGAAVGVHVALVDDGPE 99
           I  +E  A  + +EA +R A +AGAR          P    A+   A G  V L    P 
Sbjct: 127 ISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPS 186

Query: 100 DGDGEHLRRDPEQGLGPPRKAHG-------VQGGPCAAR--AEGGALHGRPGRD------ 144
                   R P +G   PRK+          +  P A R  + GG L     R       
Sbjct: 187 ARP-----RPPTEG---PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 238

Query: 145 --ARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPA 202
             + P R   + PS R  PR    P          QP P    A RP +    R  AAPA
Sbjct: 239 PLSSPAR---SGPSARGTPRAPAHPS---------QPKPKGLQALRPPQVTPPRKDAAPA 286

Query: 203 PPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSP 248
                   GP  SSP A P+   PPSP+ P P ++T L +PPA  P
Sbjct: 287 -------LGPLSSSPLATPSPSAPPSPSAP-PSLQT-LPSPPATPP 323



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 43/129 (33%), Positives = 53/129 (41%), Gaps = 26/129 (20%)

Query: 131 RAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGS-ARRP 189
           +A+ GA    P   AR   LL+  P G PRP P   P         L+ L   G+  R+P
Sbjct: 7   KAKAGAAARTPA--ARAPGLLTPRPPGSPRPPPPVTP-------AALRVLGAAGAVGRKP 57

Query: 190 RRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARSPG 249
              RAG  G A  P + + RAGP         TS PP S            R PPA++  
Sbjct: 58  LAERAGGIGGATIPES-APRAGP-------TRTSRPPASGRGE--------RAPPAKNTS 101

Query: 250 AGWGSGAGR 258
            G  S  GR
Sbjct: 102 PGPVSSPGR 110



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 15/106 (14%)

Query: 155 PSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAA----------PAPP 204
           P   P P+  P   +  L  P   P  PP S       +A    A           P+PP
Sbjct: 349 PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPP 408

Query: 205 TGSMRAGPG--PSSPSAAPTSHPPPSPACPGPEMETILRNPPARSP 248
             +  + P   P SPSA P S  PPS A P  ++     +PPA  P
Sbjct: 409 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPP---SPPASPP 451



 Score = 35.8 bits (81), Expect = 0.039
 Identities = 35/129 (27%), Positives = 43/129 (33%), Gaps = 33/129 (25%)

Query: 155 PSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGR----AGRGGAAPAPPTGSMRA 210
           PS  P P+  P      L L    P  PP  A  P +      A   G AP  P+ S+  
Sbjct: 454 PSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPM 513

Query: 211 GP------------------GPSSPSAAPTSHPPPSPACPGPEMETILRN---------- 242
            P                   P SP A+PT   P  P  PGP+                 
Sbjct: 514 SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP 573

Query: 243 -PPARSPGA 250
            PP+RSP +
Sbjct: 574 PPPSRSPSS 582



 Score = 32.3 bits (72), Expect = 0.43
 Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 163 PLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAP---APPTGSMRAGPGPSSPSA 219
           P   P    +  P   P  PP S       +A    AAP    PP  S  A P P SPSA
Sbjct: 400 PFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPP--SPPASP-PMSPSA 456

Query: 220 APTSHPPPSPACPGPEMETILRNPPARSPGA 250
            P    PP  A P  +    L  PP ++P A
Sbjct: 457 TPPPQAPPPLAAPPLQ----LAKPPPQAPPA 483



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 49/191 (25%), Positives = 59/191 (30%), Gaps = 21/191 (10%)

Query: 68  AEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLG---PPRKAHGVQ 124
           A A G +   E A  +G A      + +  P  G      R P  G G   PP K     
Sbjct: 50  AGAVGRKPLAERAGGIGGAT-----IPESAPRAGP-TRTSRPPASGRGERAPPAK--NTS 101

Query: 125 GGPCAA--RAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPP 182
            GP ++  RA G    G  G+             G+    P    L       T  P P 
Sbjct: 102 PGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPG 161

Query: 183 PGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRN 242
             S    RR RA   G     P       P PS+    PT  P  S +       T    
Sbjct: 162 TPSPAMARRSRAA--GTEVGLPR------PAPSARPRPPTEGPRKSVSSASEHSTTEPSP 213

Query: 243 PPARSPGAGWG 253
              R P AG G
Sbjct: 214 AARRRPSAGGG 224



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 7/100 (7%)

Query: 151 LSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTG---S 207
           L   P   P   P+  P       P      PP  A  P    A      P+PP     S
Sbjct: 396 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQA--PPSLAAPPLQVPPSPPASPPMS 453

Query: 208 MRAGPGPSSPSAAPTSHPPPSPACPGPEMETILRNPPARS 247
             A P P +P   P + PP   A P P+    L  PP ++
Sbjct: 454 PSATPPPQAPP--PLAAPPLQLAKPPPQAPPALATPPLQA 491



 Score = 29.3 bits (64), Expect = 3.6
 Identities = 51/201 (25%), Positives = 72/201 (35%), Gaps = 31/201 (15%)

Query: 66  RDAEAAGARVPVEHAAQLGAAVGVHVALVDDGPEDGDGEHLRRDPEQGLG---PPRKAHG 122
           R A +A  R P E   +  ++   H +  +  P        RR P  G G   P  ++  
Sbjct: 182 RPAPSARPRPPTEGPRKSVSSASEH-STTEPSPA------ARRRPSAGGGLQRPASRSLS 234

Query: 123 VQGGPCAARAEGG-ALHGRPGRDARPWR-----LLSACPSGRPRPRPLPLPLMLMLM--- 173
               P ++ A  G +  G P   A P +     L +  P     PR    P +  L    
Sbjct: 235 SSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP 294

Query: 174 LPTLQPLPPPGSARRPRRGRAGRGGAAPAPP-TGSMRAGPGPSSPSAAPTSHPPPSP--- 229
           L T  P  PP  +  P           P+PP T   +A     SP+   T    PSP   
Sbjct: 295 LATPSPSAPPSPSAPPSL------QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLS 348

Query: 230 --ACPGPEMETILRNPPARSP 248
             A P P+    L  PP ++P
Sbjct: 349 PLATPPPQAPPALALPPLQAP 369



 Score = 28.9 bits (63), Expect = 4.7
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 147 PWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTG 206
           P   L   P   P P+  P+    +L +P   P  P  + + PRR        + + P  
Sbjct: 507 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP--TLQAPRRPPTPGPDTSVSGPRL 564

Query: 207 SMRAGPGPSSPSAAPTSHPPPSPACPGPEM 236
           ++   PGP  P +       PS    GP++
Sbjct: 565 TLALAPGPPPPPSR-----SPSSTLSGPDL 589


>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 50/155 (32%), Positives = 62/155 (40%), Gaps = 37/155 (23%)

Query: 125 GGPCAARAEGGALHGRPGRDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLP--- 181
           GG  AAR       G  GR  R          G P    LP P +++  L  ++P P   
Sbjct: 3   GGVQAARFGAAVRGGGAGRRVR-------VGVGEPGGFCLPGPALVVAGLDGIRPAPAAA 55

Query: 182 -PPG-------------SARRPRR---GRAGRGG---AAPAPPTGSMRAGPG-PSSPSAA 220
            PP              +A +PRR   G  G GG   A+P PP    R  P  P++PS  
Sbjct: 56  HPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPG 115

Query: 221 PT----SHPPPSPACPGPEMETILRNPPARSPGAG 251
           P     S PPPSP  P P + T   + PA  P  G
Sbjct: 116 PLPARPSSPPPSP--PSPPVPTAQSSLPAPWPPQG 148



 Score = 37.7 bits (86), Expect = 0.010
 Identities = 41/131 (31%), Positives = 50/131 (38%), Gaps = 20/131 (15%)

Query: 115 GPPRKAHGVQG-GPCAARAEGGALHGRPGRDARPWRLLSACPSGR-PRPR-------PLP 165
           GP     G+ G  P  A A   A   RP   AR   L +A P  R P P+         P
Sbjct: 37  GPALVVAGLDGIRPAPAAAHPPAPRERPAA-ARLSALAAAQPRRRSPGPQGGGGGDIASP 95

Query: 166 LPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHP 225
           LP       P LQP   P     P  G      A P+ P  S  + P P++ S+ P   P
Sbjct: 96  LP-------PALQPRGAPAVPAAPSPGPLP---ARPSSPPPSPPSPPVPTAQSSLPAPWP 145

Query: 226 PPSPACPGPEM 236
           P  P  P P +
Sbjct: 146 PQGPRSPAPSL 156


>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
           sapiens]
          Length = 483

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 65/230 (28%), Positives = 83/230 (36%), Gaps = 47/230 (20%)

Query: 72  GARVPVEHAAQLGAAVGVHVALV------DDGPEDGDGEHLRRD---PEQGLG----PPR 118
           G R P E   +  A  G   AL+      D  P     E L R+   PE  +       R
Sbjct: 148 GRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRR 207

Query: 119 KAHGVQGGPCAARAEGGALHGRPG--RDARPWRLLS---ACPSGRPRPR----PLPLPLM 169
             H  QGG   A+A GG  +  PG    A  W   +   A  +G P P     P  LP  
Sbjct: 208 ARHPGQGGRAPAQA-GGLCNAAPGGGHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQG 266

Query: 170 LMLM-----LPTLQP--LPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPS---- 218
             +       P LQP    P     +P   R     AAPAPP G++     P  P     
Sbjct: 267 AFVSQAARAAPALQPSQAAPAEGISQPAPARGDFAYAAPAPPDGALSHPQAPRWPPHPGK 326

Query: 219 ------------AAPTSHPPPSPACPGPEMETILRNPPAR-SPGAGWGSG 255
                         P +   P PA  GP+ + +L  P ++ SP  GWG G
Sbjct: 327 SREDRDPQRDGLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRG 376



 Score = 31.2 bits (69), Expect = 0.95
 Identities = 38/142 (26%), Positives = 47/142 (33%), Gaps = 37/142 (26%)

Query: 143 RDARPWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRP------------- 189
           R++RPW      P GR R R         L+L   +    PG A R              
Sbjct: 141 RESRPWPGRRGPPEGR-RKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRI 199

Query: 190 ------RRGR-AGRGGAAPAPPTGSMRAGPGPSSPSAA--------------PTSHPPPS 228
                 RR R  G+GG APA   G   A PG   P+ +              P  H P +
Sbjct: 200 QIWFQNRRARHPGQGGRAPAQAGGLCNAAPGGGHPAPSWVAFAHTGAWGTGLPAPHVPCA 259

Query: 229 PAC--PGPEMETILRNPPARSP 248
           P     G  +    R  PA  P
Sbjct: 260 PGALPQGAFVSQAARAAPALQP 281



 Score = 30.8 bits (68), Expect = 1.2
 Identities = 46/185 (24%), Positives = 60/185 (32%), Gaps = 40/185 (21%)

Query: 56  GAGEEGSEAQRDAEAAGARVPVEHAAQLG----AAVGVHVALVDDGPEDGDGEHLR---- 107
           GA  +G+   + A AA A  P + A   G    A      A     P DG   H +    
Sbjct: 261 GALPQGAFVSQAARAAPALQPSQAAPAEGISQPAPARGDFAYAAPAPPDGALSHPQAPRW 320

Query: 108 ----------RDPEQGLGPPRKAHGVQGGPCAARAEGGALHGRPGRDARPWRLLSACP-- 155
                     RDP++  G P      Q GP  A  +G  +   P     PW      P  
Sbjct: 321 PPHPGKSREDRDPQRD-GLPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQV 379

Query: 156 ---SGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTGSMRAGP 212
              +  P+    P P          QP PP  SAR+      G+    PAP        P
Sbjct: 380 AGAAWEPQAGAAPPP----------QPAPPDASARQ------GQMQGIPAPSQALQEPAP 423

Query: 213 GPSSP 217
             + P
Sbjct: 424 WSALP 428


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.134    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,928,379
Number of Sequences: 37866
Number of extensions: 1243889
Number of successful extensions: 19799
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 1717
Number of HSP's that attempted gapping in prelim test: 9812
Number of HSP's gapped (non-prelim): 7725
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.