Search of human proteins with 239750924

Search of human proteins with 239750924

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750924 PREDICTED: similar to Putative golgin subfamily A
member 2-like protein 5 [Homo sapiens]
         (110 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750924 PREDICTED: similar to Putative golgin subfamily A m...   223   3e-59
gi|239745322 PREDICTED: similar to Putative golgin subfamily A m...   223   3e-59
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi...   121   1e-28
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa...   103   4e-23
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor...   103   4e-23
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa...   102   9e-23
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor...   102   9e-23
gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]           99   7e-22
gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM13...    98   2e-21
gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]             64   2e-11
gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]             64   2e-11
gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]             62   1e-10
gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Hom...    55   1e-08
gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo s...    37   0.003
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom...    36   0.008
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap...    35   0.010
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi...    35   0.010
gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-l...    35   0.010
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s...    34   0.022
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap...    34   0.022
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi...    32   0.11 
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l...    31   0.19 
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein...    31   0.19 
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein...    31   0.19 
gi|239750798 PREDICTED: similar to hect domain and RLD 2 [Homo s...    30   0.32 
gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-l...    30   0.32 
gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein...    30   0.32 
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l...    30   0.42 
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l...    30   0.42 
gi|92091575 coiled-coil domain containing 57 [Homo sapiens]            30   0.54 

>gi|239750924 PREDICTED: similar to Putative golgin subfamily A
           member 2-like protein 5 [Homo sapiens]
          Length = 110

 Score =  223 bits (568), Expect = 3e-59
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
           MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA
Sbjct: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60

Query: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQIHLLIIGVYIFI 110
           AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQIHLLIIGVYIFI
Sbjct: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQIHLLIIGVYIFI 110


>gi|239745322 PREDICTED: similar to Putative golgin subfamily A
           member 2-like protein 5 [Homo sapiens]
          Length = 110

 Score =  223 bits (568), Expect = 3e-59
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
           MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA
Sbjct: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60

Query: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQIHLLIIGVYIFI 110
           AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQIHLLIIGVYIFI
Sbjct: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQIHLLIIGVYIFI 110


>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
           sapiens]
          Length = 1002

 Score =  121 bits (304), Expect = 1e-28
 Identities = 64/87 (73%), Positives = 71/87 (81%), Gaps = 1/87 (1%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
           MPSI EDL+SREAMVAF NSA+ SAEEEQ A+L GQLKEQRV C+ LAH +A AQKEPEA
Sbjct: 723 MPSIPEDLESREAMVAFFNSAVASAEEEQ-ARLRGQLKEQRVRCRRLAHLLASAQKEPEA 781

Query: 61  AAPTPRTGGDSACGETHRAVENLSYKL 87
           AAP P TGGDS CGETHRA++    KL
Sbjct: 782 AAPAPGTGGDSVCGETHRALQGAMEKL 808


>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
           sapiens]
          Length = 185

 Score =  103 bits (256), Expect = 4e-23
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 11/91 (12%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
           MP+I  DL+SREAMVAF NSA  +A+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQ-----------RVCCQPLAHPVASSQKKPEV 148

Query: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVY 91
           AAP P TGG+S CGETH+A++    KL R+Y
Sbjct: 149 AAPAPETGGESVCGETHQALQGAMEKLQRLY 179


>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
           [Homo sapiens]
          Length = 185

 Score =  103 bits (256), Expect = 4e-23
 Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 11/91 (12%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
           MP+I  DL+SREAMVAF NSA  +A+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQ-----------RVCCQPLAHPVASSQKKPEV 148

Query: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVY 91
           AAP P TGG+S CGETH+A++    KL R+Y
Sbjct: 149 AAPAPETGGESVCGETHQALQGAMEKLQRLY 179


>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
           sapiens]
          Length = 230

 Score =  102 bits (253), Expect = 9e-23
 Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 11/98 (11%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
           MP+I  DL+SREAMVAF NSA  +A+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQ-----------RVCCQPLAHPVASSQKKPEV 148

Query: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
           AAP P TGG+S CGETH+A++    KL    S+   CQ
Sbjct: 149 AAPAPETGGESVCGETHQALQGAMEKLQESTSARGQCQ 186


>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
           [Homo sapiens]
          Length = 230

 Score =  102 bits (253), Expect = 9e-23
 Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 11/98 (11%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
           MP+I  DL+SREAMVAF NSA  +A+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 100 MPNIPGDLESREAMVAFFNSAGANAQEEQ-----------RVCCQPLAHPVASSQKKPEV 148

Query: 61  AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
           AAP P TGG+S CGETH+A++    KL    S+   CQ
Sbjct: 149 AAPAPETGGESVCGETHQALQGAMEKLQESTSARGQCQ 186


>gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]
          Length = 131

 Score = 99.0 bits (245), Expect = 7e-22
 Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 11/98 (11%)

Query: 1  MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
          MP+I  DL+SREAMVAF NSA  SA+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 1  MPNIPGDLESREAMVAFFNSAGASAQEEQ-----------RVCCQPLAHPVASSQKKPEV 49

Query: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
          AAP P +GG+S  GETHRA++    KL    S+   CQ
Sbjct: 50 AAPAPESGGESVFGETHRALQGAMEKLQESTSARGQCQ 87


>gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM130
          [Homo sapiens]
          Length = 131

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 11/98 (11%)

Query: 1  MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEA 60
          MP+I  DL+SREAMVAF NSA  +A+EEQ           RVCCQ LAHPVA +QK+PE 
Sbjct: 1  MPNIPGDLESREAMVAFFNSAGANAQEEQ-----------RVCCQPLAHPVASSQKKPEV 49

Query: 61 AAPTPRTGGDSACGETHRAVENLSYKLARVYSSHECCQ 98
          AAP P +GG+S  GETHRA++    KL    S+   CQ
Sbjct: 50 AAPAPESGGESVFGETHRALQGAMEKLQESTSARGQCQ 87


>gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 421

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 11/60 (18%)

Query: 12  EAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGGDS 71
           +  VAF NSA  SA+EEQ           R+CCQ LAHPVA +QK+PEAAAP P TGG+S
Sbjct: 188 DQQVAFFNSAGTSAQEEQ-----------RMCCQPLAHPVASSQKKPEAAAPAPGTGGES 236


>gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 421

 Score = 64.3 bits (155), Expect = 2e-11
 Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 11/60 (18%)

Query: 12  EAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGGDS 71
           +  VAF NSA  SA+EEQ           R+CCQ LAHPVA +QK+PEAAAP P TGG+S
Sbjct: 188 DQQVAFFNSAGTSAQEEQ-----------RMCCQPLAHPVASSQKKPEAAAPAPGTGGES 236


>gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 212

 Score = 61.6 bits (148), Expect = 1e-10
 Identities = 33/55 (60%), Positives = 37/55 (67%), Gaps = 11/55 (20%)

Query: 15 VAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGG 69
          VAF NSA  SA+EEQ           R+CCQ LAHPVA +QK+PEAAAP P TGG
Sbjct: 18 VAFFNSAGTSAQEEQ-----------RMCCQPLAHPVASSQKKPEAAAPAPGTGG 61


>gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Homo
           sapiens]
          Length = 144

 Score = 55.1 bits (131), Expect = 1e-08
 Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 13/92 (14%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHP----VALAQK 56
           MPSI EDL+S++AMVAF NSA+ SAEEE QA+L GQLKE       +  P        Q 
Sbjct: 13  MPSIPEDLESQKAMVAFFNSAVASAEEE-QARLCGQLKECTASAWLICWPRPRRNLRQQP 71

Query: 57  EPEAAAPTPRTGGDS--------ACGETHRAV 80
           +P+     P  G  +        +CG  HR V
Sbjct: 72  QPQELGVIPCVGRPTRPCRGPWRSCGRVHRTV 103


>gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo
           sapiens]
          Length = 1102

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 10/98 (10%)

Query: 5   LEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPT 64
           L+ L   +++   LN+     E +   QL  Q+KE +     +  PVA AQKEPEAA   
Sbjct: 485 LQQLAEPQSIFKELNN-----ENKSALQLEQQVKELQEKLGEVKDPVASAQKEPEAAR-- 537

Query: 65  PRTGGDSACGETHRAVENLSYK--LARVYSSHECCQIH 100
              G     GE+   +++L  K  L+ +    E C IH
Sbjct: 538 -GPGAPGPGGESSSFMDHLEEKADLSELVKKKELCFIH 574


>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
           sapiens]
          Length = 314

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 26  EEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGGDSA 72
           E +   QL  Q+KE +     +   +  A+KEPEAA P   TGG+S+
Sbjct: 84  ENKSALQLEQQVKELQEKLGQVTETLTSAEKEPEAAVPASGTGGESS 130


>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
           sapiens]
          Length = 603

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 26  EEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGGDSA 72
           E +   QL  Q+KE +     +   +  A+KEPEAA P   TGG+S+
Sbjct: 372 ENKSALQLEQQVKELQEKLGQVMETLTSAEKEPEAAVPASGTGGESS 418


>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
           sapiens]
          Length = 603

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 26  EEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGGDSA 72
           E +   QL  Q+KE +     +   +  A+KEPEAA P   TGG+S+
Sbjct: 372 ENKSALQLEQQVKELQEKLGQVMETLTSAEKEPEAAVPASGTGGESS 418


>gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 3 [Homo sapiens]
          Length = 601

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 26  EEEQQAQLHGQLKE-QRVCCQHLAHPVALAQKEPEAA--APTPRTGGDSACGETH 77
           E +   QL  Q+KE Q    + LAH VA AQKEPEAA     P  GG+S+    H
Sbjct: 377 ENKSVLQLEQQVKELQEKLGKRLAHLVASAQKEPEAARGPGAPGPGGESSSFMDH 431


>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
           sapiens]
          Length = 1052

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 6/46 (13%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQH 46
           MPS+ EDL+SREAM +F++      + E++A L   +K++ +C  H
Sbjct: 485 MPSVPEDLESREAMSSFMD------QLEEKADLSELVKKKELCFIH 524


>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
           sapiens]
          Length = 430

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 14/82 (17%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAE-----EEQQAQLHGQLKEQRVCCQHLAHPVALAQ 55
           MPS+ EDL+SREAM  F++     A+     E+++       +E+  C Q + HP+    
Sbjct: 238 MPSVPEDLESREAMSGFMDHLEEKADLSELVEKEELGFFQYYRER--CHQKVYHPITKPG 295

Query: 56  KEPEAAAP-------TPRTGGD 70
              + AAP        P  GGD
Sbjct: 296 GSAKDAAPGGGHHQAGPGQGGD 317


>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
           sapiens]
          Length = 434

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 14/82 (17%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAE-----EEQQAQLHGQLKEQRVCCQHLAHPVALAQ 55
           +PSI +DL+SREAM  F++     A+     E+++       +E+  C Q + HP+    
Sbjct: 242 IPSIPQDLESREAMSGFMDHLEEKADLSELVEKEELGFFQYYRER--CHQKVYHPITKPG 299

Query: 56  KEPEAAAP-------TPRTGGD 70
              + AAP        P  GGD
Sbjct: 300 GSAKDAAPGGGHHQAGPGQGGD 321


>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 6/46 (13%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQH 46
           MPS+ ED +SREAM +F++        E++A L   +K++ +C  H
Sbjct: 443 MPSVPEDPESREAMSSFMDHL------EEKADLSELVKKKELCFIH 482


>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
           [Homo sapiens]
          Length = 580

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 6/46 (13%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQH 46
           MPS+ ED +SREAM +F++        E++A L   +K++ +C  H
Sbjct: 391 MPSVPEDPESREAMSSFMDHL------EEKADLSELVKKKELCFIH 430


>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
           isoform 1 [Homo sapiens]
          Length = 632

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 6/46 (13%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQH 46
           MPS+ ED +SREAM +F++        E++A L   +K++ +C  H
Sbjct: 443 MPSVPEDPESREAMSSFMDHL------EEKADLSELVKKKELCFIH 482


>gi|239750798 PREDICTED: similar to hect domain and RLD 2 [Homo
           sapiens]
          Length = 691

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 5   LEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPT 64
           L+ L   +++   LN+     E +   QL  Q+KE +     +      AQKEPEAA   
Sbjct: 475 LQQLAEPQSIFKELNN-----ENKSALQLEQQVKELQEKLGEVKDTETSAQKEPEAAR-- 527

Query: 65  PRTGGDSACGETHRAVENLSYK--LARVYSSHECCQIH 100
              G     GE+   +++L  K  L+ +    E C IH
Sbjct: 528 -GPGAPGPGGESSSFMDHLEEKADLSELVKKKELCFIH 564


>gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 [Homo sapiens]
          Length = 602

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 26  EEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGGDSACGETHRAVENLSY 85
           E +   QL  Q+KE +     +      AQKEPEAA      G     GE+   +++L  
Sbjct: 379 ENKNALQLEQQVKELQEKLGEVKETETSAQKEPEAAR---GPGAPGPGGESSSFMDHLEE 435

Query: 86  K--LARVYSSHECCQIH 100
           K  L+ +    E C IH
Sbjct: 436 KADLSELVKKKELCFIH 452


>gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein 3
           isoform 2 [Homo sapiens]
          Length = 602

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 26  EEEQQAQLHGQLKEQRVCCQHLAHPVALAQKEPEAAAPTPRTGGDSACGETHRAVENLSY 85
           E +   QL  Q+KE +     +      AQKEPEAA      G     GE+   +++L  
Sbjct: 379 ENKNALQLEQQVKELQEKLGEVKETETSAQKEPEAAR---GPGAPGPGGESSSFMDHLEE 435

Query: 86  K--LARVYSSHECCQIH 100
           K  L+ +    E C IH
Sbjct: 436 KADLSELVKKKELCFIH 452


>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 632

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 19/78 (24%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRV---------CCQHLAHPV 51
           MPS+ EDL+SREAM +F++        +++A L   +K+Q +         C Q + H +
Sbjct: 443 MPSVPEDLESREAMSSFMDHL------KEKADLSELVKKQELRFIQYWQERCHQKIHHLL 496

Query: 52  ALAQKEPEAAAPTPRTGG 69
           +    EP   A     GG
Sbjct: 497 S----EPGGRAKDAALGG 510


>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 4 [Homo sapiens]
          Length = 632

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 19/78 (24%)

Query: 1   MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRV---------CCQHLAHPV 51
           MPS+ EDL+SREAM +F++        +++A L   +K+Q +         C Q + H +
Sbjct: 443 MPSVPEDLESREAMSSFMDHL------KEKADLSELVKKQELRFIQYWQERCHQKIHHLL 496

Query: 52  ALAQKEPEAAAPTPRTGG 69
           +    EP   A     GG
Sbjct: 497 S----EPGGRAKDAALGG 510


>gi|92091575 coiled-coil domain containing 57 [Homo sapiens]
          Length = 915

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 20  SALVSAEEEQQAQLHGQLKEQRVCCQHLAH----PVALAQKEPEAAAPTPRTGGDSACGE 75
           S+ +    EQ   L   + + R   + L+H    P+  A +  +A  P P  GGD+A  +
Sbjct: 518 SSEIQRLREQNTSLRNAIAQMRKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPD 577

Query: 76  THRAVE 81
              A+E
Sbjct: 578 YVLALE 583


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.131    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,401,185
Number of Sequences: 37866
Number of extensions: 184029
Number of successful extensions: 765
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 72
length of query: 110
length of database: 18,247,518
effective HSP length: 80
effective length of query: 30
effective length of database: 15,218,238
effective search space: 456547140
effective search space used: 456547140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.