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Search of human proteins with 239750893
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750893 PREDICTED: similar to acidic (leucine-rich)
nuclear phosphoprotein 32 family, member B [Homo sapiens]
(272 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 552 e-157
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 552 e-157
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 399 e-111
gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens] 369 e-102
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 270 8e-73
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 230 9e-61
gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens] 211 7e-55
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 206 1e-53
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 150 1e-36
gi|21071028 acidic nuclear phosphoprotein 32D [Homo sapiens] 143 1e-34
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 73 2e-13
gi|55956788 nucleolin [Homo sapiens] 72 5e-13
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 72 5e-13
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 72 7e-13
gi|115529449 upstream binding transcription factor, RNA polymera... 71 1e-12
gi|115529451 upstream binding transcription factor, RNA polymera... 71 1e-12
gi|7657671 upstream binding transcription factor, RNA polymerase... 71 1e-12
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 70 2e-12
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 70 2e-12
gi|21735415 centromere protein B [Homo sapiens] 69 6e-12
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 65 5e-11
gi|17975763 myelin transcription factor 1 [Homo sapiens] 65 6e-11
gi|221219020 NYD-SP11 protein [Homo sapiens] 64 1e-10
gi|21361639 DIPB protein [Homo sapiens] 64 1e-10
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 63 2e-10
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 63 2e-10
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 62 5e-10
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 61 9e-10
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 61 9e-10
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 61 1e-09
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 552 bits (1422), Expect = e-157
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE 60
MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE
Sbjct: 1 MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE 60
Query: 61 FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL 120
FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL
Sbjct: 61 FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL 120
Query: 121 KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA 180
KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA
Sbjct: 121 KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA 180
Query: 181 QVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDK 240
QVDGVDKEEEDEEGEDEKD ENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDK
Sbjct: 181 QVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDK 240
Query: 241 DEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
DEDDEDEDEDEEEEESGKGENRKRETDDEEDG
Sbjct: 241 DEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 552 bits (1422), Expect = e-157
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE 60
MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE
Sbjct: 1 MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE 60
Query: 61 FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL 120
FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL
Sbjct: 61 FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL 120
Query: 121 KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA 180
KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA
Sbjct: 121 KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA 180
Query: 181 QVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDK 240
QVDGVDKEEEDEEGEDEKD ENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDK
Sbjct: 181 QVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDK 240
Query: 241 DEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
DEDDEDEDEDEEEEESGKGENRKRETDDEEDG
Sbjct: 241 DEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 399 bits (1026), Expect = e-111
Identities = 202/233 (86%), Positives = 213/233 (91%), Gaps = 2/233 (0%)
Query: 37 ARVREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRI 96
A VRE VLDNCKSND KIE LTAEFVNLEFL LINVGLIS+SNLPKLPKLKK LSENRI
Sbjct: 17 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRI 76
Query: 97 FGGLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVF 156
FGGL+M AEKLPNLTHLNLSG KLKDISTLEPLKKLECLKSLDLFNCEV NLNDY+ESVF
Sbjct: 77 FGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVF 136
Query: 157 KLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDE 216
KLLPQLT LD YD EDQEAPDSDA+VDGVD+EEEDEEGEDE+D ++EDGEEEE DEE+DE
Sbjct: 137 KLLPQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDE 196
Query: 217 DEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDE 269
DEDVEGD+D DEVSEEEEEFGL DE+DEDEDEDEEEEE GKGE RKRETDDE
Sbjct: 197 DEDVEGDEDDDEVSEEEEEFGL--DEEDEDEDEDEEEEEGGKGEKRKRETDDE 247
>gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens]
Length = 450
Score = 369 bits (947), Expect = e-102
Identities = 181/182 (99%), Positives = 182/182 (100%)
Query: 1 MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE 60
MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE
Sbjct: 1 MTTRPQAIGQGLGPCWPISDSAHPRPGAGDGASGSAARVREHVLDNCKSNDWKIESLTAE 60
Query: 61 FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL 120
FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL
Sbjct: 61 FVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKL 120
Query: 121 KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA 180
KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA
Sbjct: 121 KDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDA 180
Query: 181 QV 182
Q+
Sbjct: 181 QL 182
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 270 bits (691), Expect = 8e-73
Identities = 143/233 (61%), Positives = 178/233 (76%), Gaps = 9/233 (3%)
Query: 39 VREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFG 98
V+E VLDN +SN+ K+E LT EF LEFL INVGL SI+NLPKL KLKK LS+NR+ G
Sbjct: 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSG 78
Query: 99 GLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKL 158
GL + AEK PNLTHLNLSG K+KD+ST+EPLKKLE LKSLDLFNCEV NLNDY+E+VFKL
Sbjct: 79 GLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKL 138
Query: 159 LPQLTCLDTYDPEDQEAPDSDAQ--VDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDE 216
LPQLT LD YD +D+EAPDSDA+ V+G+D EEEDE D E D + + +++EEDE
Sbjct: 139 LPQLTYLDGYDRDDKEAPDSDAEGYVEGLDDEEEDE------DEEEYDEDAQVVEDEEDE 192
Query: 217 DEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDE 269
DE+ EG+++ EEE+E G + E D++EDE+E EE +G+ RKRE +DE
Sbjct: 193 DEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEELGEEE-RGQKRKREPEDE 244
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 230 bits (587), Expect = 9e-61
Identities = 130/254 (51%), Positives = 171/254 (67%), Gaps = 25/254 (9%)
Query: 35 SAARVREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSEN 94
S V E VLDNC + +IE L F LEFL + NV L S++ LP L KL+K LS+N
Sbjct: 15 SPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARLPSLNKLRKLELSDN 74
Query: 95 RIFGGLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQES 154
I GGL + AEK PNLT+LNLSG K+KD+ST+E L+ L+ LKSLDLFNCE+ NL DY+ES
Sbjct: 75 IISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLFNCEITNLEDYRES 134
Query: 155 VFKLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDG------EEE 208
+F+LL Q+T LD +D ED EAPDS+ ++++ED + +DE++ ENE G EEE
Sbjct: 135 IFELLQQITYLDGFDQEDNEAPDSE------EEDDEDGDEDDEEEEENEAGPPEGYEEEE 188
Query: 209 ELDEEEDEDEDVEGDDDKDEVSEEEEEFGLD-------KDEDDED----EDEDEEEEESG 257
E +EEEDEDED + D+ E+ E EEE GL +DE+D+D E E+EEEEE G
Sbjct: 189 EEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEEEG 248
Query: 258 --KGENRKRETDDE 269
+GE RKR+ +D+
Sbjct: 249 GLRGEKRKRDAEDD 262
Score = 33.1 bits (74), Expect = 0.27
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEE----GEDEKDXENEDGEEEE 209
E Q+ D D V+ ++EEE+EE GE K +DGEEE+
Sbjct: 225 EIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEED 267
>gi|6912604 acidic nuclear phosphoprotein 32C [Homo sapiens]
Length = 234
Score = 211 bits (536), Expect = 7e-55
Identities = 130/231 (56%), Positives = 161/231 (69%), Gaps = 21/231 (9%)
Query: 39 VREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFG 98
V+E LDN +SN+ K+E+LT EF LEFL IN GL SIS+LPKL KL+K L R+ G
Sbjct: 19 VKELALDNSRSNEGKLEALTDEFEELEFLSKINGGLTSISDLPKL-KLRKLEL---RVSG 74
Query: 99 GLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKL 158
GL + AEK PNLTHL LSG K+KD+ST+EPLK+LE LKSLDLFNCEV NLNDY E+VFKL
Sbjct: 75 GLEVLAEKCPNLTHLYLSGNKIKDLSTIEPLKQLENLKSLDLFNCEVTNLNDYGENVFKL 134
Query: 159 LPQLTCLDTYDPEDQEAPDSDAQ--VDGVDKEE----EDEEGEDEKDXENEDGEEEELDE 212
L QLT LD+ + +EAP SD + V+G+D EE E+E ED + E+E+GEEE E
Sbjct: 135 LLQLTYLDSCYWDHKEAPYSDIEDHVEGLDDEEEGEHEEEYDEDAQVVEDEEGEEE---E 191
Query: 213 EEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRK 263
EE E+EDV G D EE+E G + E D +EDE+E EE +G+ RK
Sbjct: 192 EEGEEEDVSGGD-------EEDEEGYNDGEVDGEEDEEELGEEE-RGQKRK 234
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 206 bits (525), Expect = 1e-53
Identities = 114/220 (51%), Positives = 153/220 (69%), Gaps = 25/220 (11%)
Query: 69 LINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHLNLSGKKLKDISTLEP 128
+ NV L S++ LP L KL+K LS+N I GGL + AEK PNLT+LNLSG K+KD+ST+E
Sbjct: 1 MANVELSSLARLPSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEA 60
Query: 129 LKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKE 188
L+ L+ LKSLDLFNCE+ NL DY+ES+F+LL Q+T LD +D ED EAPDS+ +++
Sbjct: 61 LQNLKNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSE------EED 114
Query: 189 EEDEEGEDEKDXENEDG------EEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLD--- 239
+ED + +DE++ ENE G EEEE +EEEDEDED + D+ E+ E EEE GL
Sbjct: 115 DEDGDEDDEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLM 174
Query: 240 ----KDEDDED----EDEDEEEEESG--KGENRKRETDDE 269
+DE+D+D E E+EEEEE G +GE RKR+ +D+
Sbjct: 175 KEEIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDD 214
Score = 33.1 bits (74), Expect = 0.27
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEE----GEDEKDXENEDGEEEE 209
E Q+ D D V+ ++EEE+EE GE K +DGEEE+
Sbjct: 177 EIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEED 219
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 150 bits (378), Expect = 1e-36
Identities = 104/256 (40%), Positives = 138/256 (53%), Gaps = 70/256 (27%)
Query: 35 SAARVREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSEN 94
S V E VLDNC + +IE L F LEFL + N + +S+L
Sbjct: 15 SPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMAN---VELSSLA------------- 58
Query: 95 RIFGGLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQES 154
+LP+L L + L+ LKSLDLFNCE+ NL DY+ES
Sbjct: 59 -----------RLPSLNKLRK--------------QNLKNLKSLDLFNCEITNLEDYRES 93
Query: 155 VFKLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDEEGE--DEKDXENEDG------E 206
+F+LL Q+T LD +D ED EAPDS+ EE+DE+G+ DE++ ENE G E
Sbjct: 94 IFELLQQITYLDGFDQEDNEAPDSE--------EEDDEDGDEDDEEEEENEAGPPEGYEE 145
Query: 207 EEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLD-------KDEDDED----EDEDEEEEE 255
EEE +EEEDEDED + D+ E+ E EEE GL +DE+D+D E E+EEEEE
Sbjct: 146 EEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGEEEEEEE 205
Query: 256 SG--KGENRKRETDDE 269
G +GE RKR+ +D+
Sbjct: 206 EGGLRGEKRKRDAEDD 221
Score = 33.1 bits (74), Expect = 0.27
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEE----GEDEKDXENEDGEEEE 209
E Q+ D D V+ ++EEE+EE GE K +DGEEE+
Sbjct: 184 EIQDEEDDDDYVEEGEEEEEEEEGGLRGEKRKRDAEDDGEEED 226
>gi|21071028 acidic nuclear phosphoprotein 32D [Homo sapiens]
Length = 131
Score = 143 bits (361), Expect = 1e-34
Identities = 74/113 (65%), Positives = 86/113 (76%)
Query: 39 VREHVLDNCKSNDWKIESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFG 98
V+E LDN +SN+ K+E LT EF LE L IN+GL SI+NLPKL KLKK LS NR
Sbjct: 19 VKELFLDNSQSNEGKLEGLTDEFEELELLNTINIGLTSIANLPKLNKLKKLELSSNRASV 78
Query: 99 GLNMSAEKLPNLTHLNLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDY 151
GL + AEK PNL HLNLSG K+KD+ST+EPLKKLE L+SLDLF CEV NLN+Y
Sbjct: 79 GLEVLAEKCPNLIHLNLSGNKIKDLSTIEPLKKLENLESLDLFTCEVTNLNNY 131
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 73.2 bits (178), Expect = 2e-13
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
+ E+ E + +G + EEE EEGE E + E +GE EE E E E+E+ EG+ +++
Sbjct: 850 EEEEGEGKGEEEGEEG-EGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEG 908
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
E EEE G K E++ +E E E EEE G+GE E + EE+
Sbjct: 909 EGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951
Score = 70.5 bits (171), Expect = 2e-12
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
E +E + + + + EEE+ EGE E++ E+GEEE EEE E E E ++ + E
Sbjct: 965 EGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVE-G 1023
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGE--NRKRETDDEEDG 272
E E E G + E++E E+E EE E+ G+GE R RE ++EE+G
Sbjct: 1024 EVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEG 1067
Score = 69.7 bits (169), Expect = 3e-12
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 174 EAPDSDAQVDGVDKEE-------EDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDK 226
E + + + G +KEE E EEG+ E++ E E+GE EE +E E E+E+ EG++++
Sbjct: 795 EGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEE-EEGEGEEEEGEGEEEE 853
Query: 227 DE-VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
E EEE E G ++E +E E E EEEE G+GE +EE+G
Sbjct: 854 GEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 900
Score = 68.6 bits (166), Expect = 6e-12
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 14/118 (11%)
Query: 169 DPEDQEAPDSDAQVDGVDKE-------------EEDEEGEDEKDXENEDGEEEELDEEED 215
+ E++E + + +G ++E EE EEGE E++ E +GE EE + E +
Sbjct: 827 EEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGE 886
Query: 216 EDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDE-EDG 272
+E+ EG+ +++E E EE G + E++E E + EEE E G+GE + E + E EDG
Sbjct: 887 GEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDG 944
Score = 68.2 bits (165), Expect = 7e-12
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEE-EDEDEDVEGDDDKDE 228
ED E + + + +EEE E EGE+E + E E+GE E +EE E E E+ EG+++ +E
Sbjct: 942 EDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEE 1001
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDE 269
E EEE + +E++E E E E E E G+GE + E ++E
Sbjct: 1002 EGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEE 1042
Score = 67.0 bits (162), Expect = 2e-11
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 171 EDQEAPDSDAQVDGVDKE-----EEDEEGEDEKDXENEDGE---EEELDEEEDEDEDVEG 222
++++ + Q +G ++E EE EEG + + E E+G+ EEE +E E E+E+ EG
Sbjct: 783 KEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEG 842
Query: 223 DDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
++++ E EEE E G ++E +E E E+E EE G+GE + E + EE+G
Sbjct: 843 EEEEGEGEEEEGE-GKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEG 891
Score = 67.0 bits (162), Expect = 2e-11
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
E++E + +G ++ EE+ EGE+E + E E+ EE E+ E E E E+ EG+ +++E
Sbjct: 982 EEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEV-EGEVEGEEGEGEGEEEEGE 1040
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
EE EE + + ++ + +EEEEE GK + E ++ +DG
Sbjct: 1041 EEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDG 1082
Score = 66.6 bits (161), Expect = 2e-11
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
E E + + ++EEE+EEGE E+ E +GEEEE + EE+E E ++ ++
Sbjct: 810 EGGEVEGGEVEEGKGEREEEEEEGEGEE--EEGEGEEEEGEGEEEEGEGKGEEEGEEGEG 867
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
EEE E G + E++E E E EEE E G+GE + E + EE+G
Sbjct: 868 EEEGEEGEGEGEEEEGEGEGEEEGE-GEGEEEEGEGEGEEEG 908
Score = 66.2 bits (160), Expect = 3e-11
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 24/128 (18%)
Query: 169 DPEDQEAPDSDAQVDG----VDKEEEDEEGEDEKDXE--NEDGEEEELDEEEDEDEDVEG 222
D E++E + + + +G V+ E E EEGE +K+ E+ EEE D+ E E+E+ EG
Sbjct: 744 DREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEG 803
Query: 223 DDDKDEVS---------------EEEEEFGLDKDED---DEDEDEDEEEEESGKGENRKR 264
++ E EEEEE G ++E+ +E+E E EEEE GKGE
Sbjct: 804 RGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGE 863
Query: 265 ETDDEEDG 272
E + EE+G
Sbjct: 864 EGEGEEEG 871
Score = 65.9 bits (159), Expect = 4e-11
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 13/115 (11%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEK-----DXENEDGE---EEELDEEEDEDEDVEG 222
E+ E + + +G +EE + EGE+E+ + E E+GE EEE E E ED + EG
Sbjct: 889 EEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEG 948
Query: 223 DDDKDEVSEEEEEFGLDKDED-----DEDEDEDEEEEESGKGENRKRETDDEEDG 272
++++ E EEEE + +E+ +E E E EEEE G+GE + E + EE+G
Sbjct: 949 EEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEG 1003
Score = 65.5 bits (158), Expect = 5e-11
Identities = 34/100 (34%), Positives = 60/100 (60%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
E+ E + + + + + E ED EGE E++ +GEEEE + E +E+ + EG++ + E
Sbjct: 923 EEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGE 982
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEE 270
EEE E +++E +E+ +E+ E EE G+GE + E + E
Sbjct: 983 EEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVE 1022
Score = 65.1 bits (157), Expect = 6e-11
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDG-----EEEELDEEEDEDEDVEGDDD 225
E+ + + + +G +EEE E E+E + E E+G EE E E E+E E+ EG+ +
Sbjct: 820 EEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGE 879
Query: 226 KDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
++E E EE G + E++E E E EEE E G+GE + E EE+G
Sbjct: 880 EEEGEGEGEEEGEGEGEEEEGEGEGEEEGE-GEGEEEEGEGKGEEEG 925
Score = 64.3 bits (155), Expect = 1e-10
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
E+ E + + + + + E E+EEGE E GEEE E E+E+ + EG+++ +
Sbjct: 860 EEGEEGEGEEEGEEGEGEGEEEEGEGE-------GEEEGEGEGEEEEGEGEGEEEGEGEG 912
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEE 270
EEEE G ++E +E E E EEEE G+GE+ + E ++EE
Sbjct: 913 EEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 64.3 bits (155), Expect = 1e-10
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 171 EDQEAPDSDAQVDGVDKEEE-----DEEGEDEKDXENEDGEEEELDEEEDEDEDVEG--- 222
E+ E + + +G +EEE +EEGE E + E +GE EE E E E+E+ EG
Sbjct: 863 EEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGE 922
Query: 223 DDDKDEVSEEEEEFGLDKDEDDEDEDEDEE-----EEESGKGENRKRETDDEEDG 272
++ ++ E EEE G + ED E E E+EE EEE G+GE + + E+G
Sbjct: 923 EEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEG 977
Score = 63.2 bits (152), Expect = 2e-10
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 172 DQEAPDSDAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
++E + + + +G + EE+E EGE E++ E E EEE + E+E E+ EG+ +++E
Sbjct: 879 EEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE-G 937
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
E E E G + E++E E E EEEE G+GE +E +G
Sbjct: 938 EGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEG 979
Score = 63.2 bits (152), Expect = 2e-10
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 172 DQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGE-EEELDEEEDEDEDVEGDDDKDEVS 230
++E + + +G + E E EE E E + E+ +GE EEE E E E+E+ EG+ +++
Sbjct: 913 EEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEG 972
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENR-----KRETDDEEDG 272
E EE G ++E+ E E E+EE EE G+ E + E ++EE+G
Sbjct: 973 EGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEG 1019
Score = 62.8 bits (151), Expect = 3e-10
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 188 EEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDE 247
EEE EGE+E+ E+ E+E +EE E E+VEG+ +K+E ++EE +++ +E+
Sbjct: 732 EEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEG 791
Query: 248 DEDEEEEESGKGENRKRETDDEEDG 272
D+ E EEE +G ++E E +G
Sbjct: 792 DQGEGEEEETEGRGEEKEEGGEVEG 816
Score = 62.8 bits (151), Expect = 3e-10
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 174 EAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEE---------ELDEEEDEDEDVEGDD 224
E + + + +G D E E EE E E + E E+GE E E E E E+E+ EG+
Sbjct: 931 EGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEG 990
Query: 225 DKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+++E EE EE G ++E + + +E+EE E G+ E + E + EE+
Sbjct: 991 EEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEE 1037
Score = 60.8 bits (146), Expect = 1e-09
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEV 229
E++ + + + +G +EEE E EGE+E + E E+ E E EEE E+ + EG++++ E
Sbjct: 880 EEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEG 939
Query: 230 SEEEEEFGLDKDEDDEDEDEDE----EEEESGKGENRKRETDDEED 271
E+ E G ++E+ E E E+E E EE G+GE + E + EE+
Sbjct: 940 EGEDGE-GEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEE 984
Score = 60.8 bits (146), Expect = 1e-09
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGE---EEELDEEEDEDEDVEGDDDKD 227
E++ + + + +G + EE+EEGE E + E E+GE EEE EEE E+ + EG+ +++
Sbjct: 996 EEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKR 264
+ EEEE +E+ + ++ EEE E GE K+
Sbjct: 1056 RRNREEEE-----EEEGKYQETGEEENERQDGEEYKK 1087
Score = 60.5 bits (145), Expect = 2e-09
Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 15/115 (13%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELD-----------EEEDEDED 219
E++ + + D ++EE++ EG++E + E +GE E+ + EE+ E+E
Sbjct: 732 EEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEG 791
Query: 220 VEGDDDKDEV---SEEEEEFG-LDKDEDDEDEDEDEEEEESGKGENRKRETDDEE 270
+G+ +++E EE+EE G ++ E +E + E EEEEE G+GE + E ++EE
Sbjct: 792 DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEE 846
Score = 58.2 bits (139), Expect = 8e-09
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 172 DQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSE 231
+QE + + G + EEE+ + E+E++ E E EE E +E E E E EG+ K+E +
Sbjct: 724 NQEMEEGGEEEHG-EGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAG 782
Query: 232 EEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
+EE K E++ D+ E EEEE G+GE K E + E G
Sbjct: 783 KEE-----KGEEEGDQGEGEEEETEGRGE-EKEEGGEVEGG 817
Score = 57.4 bits (137), Expect = 1e-08
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 172 DQEAPDSDAQVDGVDKEE-EDEEGEDEKDXENEDGEEEELDEEEDE---DEDVEGDDDKD 227
+ E P + + + +KEE + +GE+++ E E G ++E ++E +E +E EG++++
Sbjct: 685 EMERP-GEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEG 743
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESG---KGENRKRETDDEEDG 272
+ EEEE+ G K+E + +E E E E+E G K E +E EE+G
Sbjct: 744 DREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEG 791
Score = 55.5 bits (132), Expect = 5e-08
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 183 DGVDKEEEDEEG--EDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDK 240
DG ++E+++ E + E++ E E+G EEE E E+E+ D E +++K+ +EE E +
Sbjct: 706 DGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVE 765
Query: 241 DEDDEDEDEDEEEEESGKGENRKRETDDEE 270
E +++E E ++EE +GK E + E D E
Sbjct: 766 GEREKEEGERKKEERAGKEEKGEEEGDQGE 795
Score = 48.1 bits (113), Expect = 8e-06
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 168 YDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDX-ENEDGEEEELDEEEDEDEDVEGDDDK 226
+ E++E + D +++ E E+ EK+ + DGEE+E +E ++ E + +
Sbjct: 669 WQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQE-QKEREQGHQKERNQEM 727
Query: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+E EEE G +E++ D +E+EE+E GK E E + E +
Sbjct: 728 EEGGEEEHGEG---EEEEGDREEEEEKEGEGKEEGEGEEVEGERE 769
Score = 46.6 bits (109), Expect = 2e-05
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 170 PEDQEAPDSDAQVDGVDKEEEDEEGEDEKD---XENE---DGEEEELDEEEDEDEDVEGD 223
PE + + G + +++E + EKD E E +GE+E ++EE + D E
Sbjct: 651 PEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQ 710
Query: 224 DDKD-------EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
+ K+ E ++E EE G ++ + E+E+ D EEEE +GE ++ +E +G
Sbjct: 711 EQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEG 766
Score = 45.4 bits (106), Expect = 5e-05
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGE-DEKDXENEDGEEEELDEEEDEDEDVEGDDDKD 227
D +A S+ + V + E+ EG D E G E DEE ++ E +G + +
Sbjct: 628 DDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEME 687
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
E E+E +K+E + + E++E++E +G ++R + EE G
Sbjct: 688 RPGEGEKELA-EKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGG 731
Score = 35.8 bits (81), Expect = 0.041
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDX-ENEDGEEEELDEEEDEDEDVEGDDDKD 227
+ ++ EA + + +V G KE+ + +D D E +G+ + + E ED E GD +
Sbjct: 602 EEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEG-RGDGTCE 660
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDD 268
E S E + ++ E E + E E G+GE E ++
Sbjct: 661 EGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEE 701
Score = 33.5 bits (75), Expect = 0.20
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 171 EDQEAPDSDAQVDGVDK-EEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEV 229
E +E + +G ++ EE ++EGE E++ N + EEEE + ++ E+ D +E
Sbjct: 1026 EGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEY 1085
Query: 230 SEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRK 263
+ + G K + + G G+ ++
Sbjct: 1086 KKVSKIKGSVKYGKHKTYQKKSVTNTQGNGKEQR 1119
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 72.0 bits (175), Expect = 5e-13
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 38/131 (29%)
Query: 179 DAQVDGVDKEEEDEEGEDEKDXENEDGEEEEL---------------DEEEDEDEDVEGD 223
+A+ + D+EE+D+ EDE+D E+ED +E+E+ DE++++DED E D
Sbjct: 139 NAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDD 198
Query: 224 DDKDEVSEEEEEFGL-----------------------DKDEDDEDEDEDEEEEESGKGE 260
DD +E EEE D++EDDEDED+D++E++ +
Sbjct: 199 DDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDD 258
Query: 261 NRKRETDDEED 271
E ++EE+
Sbjct: 259 EDDEEEEEEEE 269
Score = 67.0 bits (162), Expect = 2e-11
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 39/124 (31%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEE-----------------GEDEKDXENEDGEEEELDEE 213
+ E D D++ D D E+EDE+ EDE D ++ED E+++ DEE
Sbjct: 144 DSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEE 203
Query: 214 EDEDED----------------------VEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDE 251
+D +E+ V D+D++E E+E++ + DEDD+DED++E
Sbjct: 204 DDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEE 263
Query: 252 EEEE 255
EEEE
Sbjct: 264 EEEE 267
Score = 66.6 bits (161), Expect = 2e-11
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 40/132 (30%)
Query: 169 DPEDQEAPDSD--------------AQVDGVDKEEEDEEGEDEKDXENEDGEEEELD--- 211
D ED E D D A + +E+DE+ ED+ D E +D EEE ++
Sbjct: 156 DEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTP 215
Query: 212 ------------------EEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEE 253
E+EDE+ED E +DD D+ +E+ D DEDDE+E+E+EEE
Sbjct: 216 AKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDED-----DDDEDDEEEEEEEEE 270
Query: 254 EESGKGENRKRE 265
E + ++++
Sbjct: 271 EPVKEAPGKRKK 282
Score = 64.7 bits (156), Expect = 8e-11
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 31/124 (25%)
Query: 177 DSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEEL----------DEEEDEDEDVEGDDDK 226
DSD + D D EEDEE ++++D + ++ E + DE++++DED E DDD
Sbjct: 144 DSDEEED--DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDD 201
Query: 227 DEVSEEEEEF-------------------GLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
+E EEE + +DED+E++DEDE++++ E+ E D
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 261
Query: 268 DEED 271
+EE+
Sbjct: 262 EEEE 265
Score = 62.8 bits (151), Expect = 3e-10
Identities = 34/133 (25%), Positives = 72/133 (54%), Gaps = 37/133 (27%)
Query: 173 QEAPDSDAQVDGVDKEEEDEEGEDEKD---------------XENEDGEEEELDEEEDED 217
+E D + D + EE+DE+ ++++D E+ED E++E DE++D+D
Sbjct: 142 KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDD 201
Query: 218 EDVEGDDDKDE-------------------VSEEEEEFGLDKDEDDEDEDEDEEEEESGK 258
E+ + +++ E V+E+E+E ++D++DED+D+DE++E+
Sbjct: 202 EEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDE---EEDDEDEDDDDDEDDEDDDD 258
Query: 259 GENRKRETDDEED 271
++ + E ++EE+
Sbjct: 259 EDDEEEEEEEEEE 271
Score = 55.1 bits (131), Expect = 7e-08
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDX-----------ENEDGEEEELDEEE 214
D D ED E D D + D ++ E + +K E+ED EE++ DE++
Sbjct: 188 DDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDD 247
Query: 215 DEDEDVEGDDDKD-EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRE 265
D+DED E DDD+D E EEEEE K+ + + E +++ + + + +K E
Sbjct: 248 DDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVE 299
Score = 53.9 bits (128), Expect = 1e-07
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 187 KEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDED 246
K ++ + ED + E++D EE DEE+DEDED + D+ + + +DEDDED
Sbjct: 135 KNGKNAKKEDSDEEEDDDSEE---DEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDED 191
Query: 247 --EDEDEEEEESGKGENRKRET 266
+DED++++E E ET
Sbjct: 192 DEDDEDDDDDEEDDSEEEAMET 213
Score = 47.0 bits (110), Expect = 2e-05
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 15/108 (13%)
Query: 166 DTYDPEDQEAPDSD--------------AQVDGVDKEEEDEEGEDEKDXENEDGEEEELD 211
D D +D E DS+ A+V V + E+ ++E+D E+ED +++E D
Sbjct: 194 DDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDE-D 252
Query: 212 EEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKG 259
+E+D+DED E +++++E +E G K E + + E +++ +G
Sbjct: 253 DEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEG 300
Score = 44.7 bits (104), Expect = 9e-05
Identities = 19/69 (27%), Positives = 42/69 (60%)
Query: 186 DKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDE 245
+ E+E+E+ EDE D ++ED E+++ +++E+E+E+ E + K+ + ++E K +
Sbjct: 234 EDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEA 293
Query: 246 DEDEDEEEE 254
+ + E E
Sbjct: 294 KKQKVEGTE 302
Score = 32.7 bits (73), Expect = 0.35
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
D + ED E D D D D ++ED+E E+E++ E E ++E + +
Sbjct: 235 DEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAK 294
Query: 226 KDEVSEEE 233
K +V E
Sbjct: 295 KQKVEGTE 302
Score = 29.3 bits (64), Expect = 3.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 237 GLDKDEDDEDEDEDEEEEESGKGENRKRETDDE 269
G + ++D DE+ED++ EE + + + E +DE
Sbjct: 137 GKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDE 169
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 72.0 bits (175), Expect = 5e-13
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 17/107 (15%)
Query: 174 EAPDSDAQVDGVDKEEE---------DEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDD 224
E DSD D +KEE+ DE G+++++ E D EEEE EEEDED+D +G+D
Sbjct: 89 ECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGED 148
Query: 225 DKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+DE EEEEE +E+E+E+E E+ N + D E+D
Sbjct: 149 VEDEEEEEEEE--------EEEEEEEENEDHQMNCHNTRIMQDTEKD 187
Score = 68.6 bits (166), Expect = 6e-12
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 180 AQVDGVDKEEEDEEGEDEKDXENEDGEE--EELDEEEDEDE-DVEGDDDKDEVSEEEEEF 236
A VD+ ++ + ED + E ++GEE E+ DE DEDE D EGD +++E EEE+E
Sbjct: 82 ADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDE- 140
Query: 237 GLDKDEDDEDEDEDEEEEESGKGENRKRETDDEE 270
D DED ED +++EEEEE + E + E +D +
Sbjct: 141 --DDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQ 172
Score = 62.8 bits (151), Expect = 3e-10
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 167 TYDPEDQE-APDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
T D + QE AP D DE +D E+ D +EE+ EE ED D GD+D
Sbjct: 63 TQDKQPQEPAPKRKPFAVKADSSSVDE-CDDSDGTEDMDEKEEDEGEEYSEDNDEPGDED 121
Query: 226 K-DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+ DE + EEE ++++++D+DED ++ E+E + E + E ++EE+
Sbjct: 122 EEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEEN 168
Score = 59.7 bits (143), Expect = 3e-09
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDE-EGEDEKDXEN-EDGEEEELDEEEDEDEDVEGD 223
+ Y ++ E D D + + D+EEE+E E EDE D E+ ED E+EE +EEE+E+E+ E +
Sbjct: 108 EEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEE 167
Query: 224 DDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEE 255
++ +++ D ++DD + DE + +E
Sbjct: 168 NEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDE 199
Score = 52.0 bits (123), Expect = 6e-07
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 215 DEDEDVEGDDDKDEVSEEE-EEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
DE +D +G +D DE E+E EE+ D DE ++++EDEE + + E + + DD+EDG
Sbjct: 88 DECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDG 146
Score = 36.2 bits (82), Expect = 0.031
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 51/136 (37%)
Query: 166 DTYDPEDQEAPDSDAQVDGVD----KEEEDEEGEDEKDXENEDGE----------EEELD 211
D + E+ E D D DG D +EEE+EE E+E++ ENED + + E D
Sbjct: 128 DREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKD 187
Query: 212 EEEDEDED-------------------------------------VEGDDDKDEVSEEEE 234
+ +++ D +E D DK+E +
Sbjct: 188 DNNNDEYDNYDELVAKSLLNLGKIAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKS 247
Query: 235 EFGLDKDEDDEDEDED 250
E LD D D E D
Sbjct: 248 ELSLDLDSDVVRETVD 263
Score = 36.2 bits (82), Expect = 0.031
Identities = 21/109 (19%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
+ +D++ D + + + ++EEE+EE E+ +D + + + E +D + + D+ DE
Sbjct: 140 EDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDE 199
Query: 229 V----------SEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
+ E+ + + + + E++S K EN R+++
Sbjct: 200 LVAKSLLNLGKIAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSE 248
Score = 28.5 bits (62), Expect = 6.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 226 KDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
K + S +E D ED ++++EDE EE S + E +++E+G
Sbjct: 81 KADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEG 127
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 71.6 bits (174), Expect = 7e-13
Identities = 35/77 (45%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 182 VDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEE---EEFGL 238
++ D+EEE+EE E+E++ E E+ EE+ +EEEDE+E E +++++E EEE EE L
Sbjct: 883 INSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGEL 942
Query: 239 DKDEDDEDEDEDEEEEE 255
+++E++EDE+E+EE EE
Sbjct: 943 EEEEEEEDEEEEEELEE 959
Score = 69.3 bits (168), Expect = 3e-12
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 160 PQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDED 219
PQL T A + D V ++ +E+EE E+E++ E EEEE +EEED +E+
Sbjct: 858 PQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEE----EEEEEEEEEDFEEE 913
Query: 220 VEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
E +++ E EEEEE ++ E++E E E+EEEEE + E E +D E G
Sbjct: 914 EEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFG 966
Score = 66.6 bits (161), Expect = 2e-11
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 170 PEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEV 229
P Q P+ G EED + + E+ EEEE +EEE+E+E+ E D +++E
Sbjct: 856 PPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEE- 914
Query: 230 SEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
E+EEE+ +++E++E+E E+E EEE G+ E + E D+EE+
Sbjct: 915 -EDEEEY-FEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEE 954
Score = 30.4 bits (67), Expect = 1.7
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 170 PEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEV 229
P QE + + EEE E+G D+ E EEE+ E E E E ++ + ++D+
Sbjct: 1048 PPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEM-ETETEAEALQ-EKEQDDT 1105
Query: 230 SEEEEEFGLDKDEDDE 245
+ +F +D DDE
Sbjct: 1106 AAMLADF-IDCPPDDE 1120
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 70.9 bits (172), Expect = 1e-12
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 187 KEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDED 246
K E +E+ E+++D E+ED EEEE DE D ED G D + SE+E E G + +EDDED
Sbjct: 637 KSESEEDDEEDEDDEDED-EEEEDDENGDSSED--GGDSSESSSEDESEDGDENEEDDED 693
Query: 247 EDEDEEEEESGKGENRKRETDDEEDG 272
ED+DE+++E E+ + G
Sbjct: 694 EDDDEDDDEDEDNESEGSSSSSSSSG 719
Score = 67.8 bits (164), Expect = 1e-11
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 151 YQESVFKLLPQLTCLDTYDPEDQEAP---DSDAQVDGVDKEEEDEEGEDEKDXENEDGEE 207
Y+E + +T L +P+ S+++ D + E++++E E+E+D EN D E
Sbjct: 608 YKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSE 667
Query: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
+ D E ED D D++E +E+E+ D++D+DEDED E E S + ++
Sbjct: 668 DGGDSSESSSEDESEDGDENEEDDEDED-----DDEDDDEDEDNESEGSSSSSSSSGDSS 722
Query: 268 DEE 270
D +
Sbjct: 723 DSD 725
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 70.9 bits (172), Expect = 1e-12
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 187 KEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDED 246
K E +E+ E+++D E+ED EEEE DE D ED G D + SE+E E G + +EDDED
Sbjct: 637 KSESEEDDEEDEDDEDED-EEEEDDENGDSSED--GGDSSESSSEDESEDGDENEEDDED 693
Query: 247 EDEDEEEEESGKGENRKRETDDEEDG 272
ED+DE+++E E+ + G
Sbjct: 694 EDDDEDDDEDEDNESEGSSSSSSSSG 719
Score = 67.8 bits (164), Expect = 1e-11
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 151 YQESVFKLLPQLTCLDTYDPEDQEAP---DSDAQVDGVDKEEEDEEGEDEKDXENEDGEE 207
Y+E + +T L +P+ S+++ D + E++++E E+E+D EN D E
Sbjct: 608 YKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSE 667
Query: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
+ D E ED D D++E +E+E+ D++D+DEDED E E S + ++
Sbjct: 668 DGGDSSESSSEDESEDGDENEEDDEDED-----DDEDDDEDEDNESEGSSSSSSSSGDSS 722
Query: 268 DEE 270
D +
Sbjct: 723 DSD 725
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 70.9 bits (172), Expect = 1e-12
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 187 KEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDED 246
K E +E+ E+++D E+ED EEEE DE D ED G D + SE+E E G + +EDDED
Sbjct: 674 KSESEEDDEEDEDDEDED-EEEEDDENGDSSED--GGDSSESSSEDESEDGDENEEDDED 730
Query: 247 EDEDEEEEESGKGENRKRETDDEEDG 272
ED+DE+++E E+ + G
Sbjct: 731 EDDDEDDDEDEDNESEGSSSSSSSSG 756
Score = 67.8 bits (164), Expect = 1e-11
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 151 YQESVFKLLPQLTCLDTYDPEDQEAP---DSDAQVDGVDKEEEDEEGEDEKDXENEDGEE 207
Y+E + +T L +P+ S+++ D + E++++E E+E+D EN D E
Sbjct: 645 YKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSE 704
Query: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
+ D E ED D D++E +E+E+ D++D+DEDED E E S + ++
Sbjct: 705 DGGDSSESSSEDESEDGDENEEDDEDED-----DDEDDDEDEDNESEGSSSSSSSSGDSS 759
Query: 268 DEE 270
D +
Sbjct: 760 DSD 762
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 70.1 bits (170), Expect = 2e-12
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 19/136 (13%)
Query: 156 FKLLPQLTCLDTYDPEDQE---APDS--------DAQVDGVDKEEEDEEGEDEKDXENED 204
+K P+ TC+ DPE + PD D + + ++E +E ++E
Sbjct: 126 YKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHET 185
Query: 205 GEEEELDE--------EEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEES 256
G DE EE +EDVE D++ +E +EE+EE D +E++E+E+E+EEEEE
Sbjct: 186 GSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Query: 257 GKGENRKRETDDEEDG 272
+ E + E D +E+G
Sbjct: 246 EEEEYEQDERDQKEEG 261
Score = 61.6 bits (148), Expect = 7e-10
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
D E + SD Q + + EEE E + E+D EE++E+ +EDE+V+ D +++E
Sbjct: 182 DHETGSSGSSDEQGNNTENEEEGVEEDVEED--------EEVEEDAEEDEEVDEDGEEEE 233
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
EEEEE +++E++ ++DE +++EE + R +D
Sbjct: 234 EEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 60.8 bits (146), Expect = 1e-09
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 172 DQEAPDSDAQVDGVDKE-EEDEEGED--EKDXE-NEDGEEEELDEEEDEDEDVEGDDDKD 227
D++ +++ + +GV+++ EEDEE E+ E+D E +EDGEEEE +EEE+E+E+ E +++ +
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE 251
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+ +++E G D D E D E G R D D
Sbjct: 252 QDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSD 295
Score = 47.0 bits (110), Expect = 2e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
D E +E + D +VD D EEE+EE E+E++ E E+ EE E D E D+ E+ D + E
Sbjct: 212 DEEVEEDAEEDEEVDE-DGEEEEEEEEEEEEEEEEEEEEYEQD-ERDQKEEGNDYDTRSE 269
Query: 229 VSEEEEEF------GLDKDEDDEDEDEDEEEEESGKG 259
S+ E + + DE ++E + +G
Sbjct: 270 ASDSGSESVSFTDGSVRSGSGTDGSDEKKKERKRARG 306
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 70.1 bits (170), Expect = 2e-12
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 19/136 (13%)
Query: 156 FKLLPQLTCLDTYDPEDQE---APDS--------DAQVDGVDKEEEDEEGEDEKDXENED 204
+K P+ TC+ DPE + PD D + + ++E +E ++E
Sbjct: 126 YKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHET 185
Query: 205 GEEEELDE--------EEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEES 256
G DE EE +EDVE D++ +E +EE+EE D +E++E+E+E+EEEEE
Sbjct: 186 GSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Query: 257 GKGENRKRETDDEEDG 272
+ E + E D +E+G
Sbjct: 246 EEEEYEQDERDQKEEG 261
Score = 61.6 bits (148), Expect = 7e-10
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
D E + SD Q + + EEE E + E+D EE++E+ +EDE+V+ D +++E
Sbjct: 182 DHETGSSGSSDEQGNNTENEEEGVEEDVEED--------EEVEEDAEEDEEVDEDGEEEE 233
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
EEEEE +++E++ ++DE +++EE + R +D
Sbjct: 234 EEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 60.8 bits (146), Expect = 1e-09
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 172 DQEAPDSDAQVDGVDKE-EEDEEGED--EKDXE-NEDGEEEELDEEEDEDEDVEGDDDKD 227
D++ +++ + +GV+++ EEDEE E+ E+D E +EDGEEEE +EEE+E+E+ E +++ +
Sbjct: 192 DEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYE 251
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+ +++E G D D E D E G R D D
Sbjct: 252 QDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSD 295
Score = 47.0 bits (110), Expect = 2e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
D E +E + D +VD D EEE+EE E+E++ E E+ EE E D E D+ E+ D + E
Sbjct: 212 DEEVEEDAEEDEEVDE-DGEEEEEEEEEEEEEEEEEEEEYEQD-ERDQKEEGNDYDTRSE 269
Query: 229 VSEEEEEF------GLDKDEDDEDEDEDEEEEESGKG 259
S+ E + + DE ++E + +G
Sbjct: 270 ASDSGSESVSFTDGSVRSGSGTDGSDEKKKERKRARG 306
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 68.6 bits (166), Expect = 6e-12
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 38/136 (27%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
+ E++E + + + +G ++EEE EE E+E E GEEEE++EE D D D E ++D++
Sbjct: 407 EEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEES 466
Query: 229 VSE-----------------------EEE---------EFGLDKDEDDEDEDEDEEEEES 256
SE +EE E G D D D E+ED++EE++E
Sbjct: 467 SSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDED 526
Query: 257 GKGENRKRETDDEEDG 272
+ + DDEEDG
Sbjct: 527 ------EDDDDDEEDG 536
Score = 62.0 bits (149), Expect = 5e-10
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 187 KEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDED 246
K E +EE E+E++ E E+GE EE +EEE E+E+ EG + +E+ EEEE ++E D D
Sbjct: 402 KSEGEEEEEEEEEEEEEEGEGEE-EEEEGEEEEEEGGEG-EELGEEEEV----EEEGDVD 455
Query: 247 EDEDEEEEESGKGENRKRE 265
DE+EEE+E E + E
Sbjct: 456 SDEEEEEDEESSSEGLEAE 474
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
Query: 204 DGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFG----LDKDEDDEDE---DEDEEEEES 256
+GEEEE +EEE+E+E+ EG+++++E EEEEE G L ++E+ E+E D DEEEEE
Sbjct: 404 EGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEED 463
Query: 257 GKGENRKRETDDEEDG 272
+ + E +D G
Sbjct: 464 EESSSEGLEAEDWAQG 479
Score = 39.7 bits (91), Expect = 0.003
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 238 LDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
L + ++E+E+E+EEEEE G+GE + E ++EE+
Sbjct: 401 LKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEE 434
Score = 37.7 bits (86), Expect = 0.011
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 192 EEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
E GED E+ +EEE DE+ED+D+D E D+
Sbjct: 505 EGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGDE 538
Score = 34.7 bits (78), Expect = 0.091
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 37/96 (38%)
Query: 172 DQEAPDSDAQVDGVDKEEEDEEGEDE---------------------------------- 197
++E + + VD ++EEEDEE E
Sbjct: 444 EEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHF 503
Query: 198 -KDXENEDGE-EEELDEEEDEDEDVEGDDDKDEVSE 231
+ E+ D + EEE DEEED DED + DDD+++ E
Sbjct: 504 LEGGEDSDSDSEEEDDEEED-DEDEDDDDDEEDGDE 538
Score = 32.3 bits (72), Expect = 0.45
Identities = 11/32 (34%), Positives = 23/32 (71%)
Query: 189 EEDEEGEDEKDXENEDGEEEELDEEEDEDEDV 220
E+ + +E+D E ED E+E+ D++E++ ++V
Sbjct: 508 EDSDSDSEEEDDEEEDDEDEDDDDDEEDGDEV 539
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 65.5 bits (158), Expect = 5e-11
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 186 DKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDE 245
D + DEE D ++ E EE E E ED+ ED + +DD D D D+DD+
Sbjct: 226 DIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDD-----------DDDDDDD 274
Query: 246 DEDEDEEEEESGKGENRKR 264
D+DED+E+EE G+ EN+KR
Sbjct: 275 DDDEDDEDEEDGEEENQKR 293
Score = 57.4 bits (137), Expect = 1e-08
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 118 KKLKDISTLEPLKKLECLKSLDLFN-CEVINLNDYQESVFKLLPQLTCLDTYDPEDQEAP 176
+K+ D+ + + E L+ L +FN E NLN Y K D + +
Sbjct: 186 QKMDDMKKMRRQRMRE-LEDLGVFNETEESNLNMYTRGKQK-----------DIQRTDEE 233
Query: 177 DSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEE 235
+D Q V+ EE E+ E E D E+ED E+++ D+++D+D+D E D+D+++ EE ++
Sbjct: 234 TTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEENQK 292
Score = 49.7 bits (117), Expect = 3e-06
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 17/84 (20%)
Query: 188 EEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDE 247
+++D + DE+ +N++G E +E ED++ + +G+D EDDED+
Sbjct: 223 KQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGED-----------------EDDEDD 265
Query: 248 DEDEEEEESGKGENRKRETDDEED 271
D+D+++++ E+ + E D EE+
Sbjct: 266 DDDDDDDDDDDDEDDEDEEDGEEE 289
Score = 42.0 bits (97), Expect = 6e-04
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 195 EDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEE 254
E E+ N ++ D + ++E + + E SEE E+ + D +DED DED++++
Sbjct: 210 ETEESNLNMYTRGKQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDED-DEDDDDD 268
Query: 255 ESGKGENRKRETDDEEDG 272
+ ++ + +DEEDG
Sbjct: 269 DDDDDDDDDEDDEDEEDG 286
Score = 31.2 bits (69), Expect = 1.0
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 211 DEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEE 270
+E E+ + ++ + ++ +EE +++ E +E E++E GE+ E DD++
Sbjct: 209 NETEESNLNMYTRGKQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDD 268
Query: 271 D 271
D
Sbjct: 269 D 269
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 65.1 bits (157), Expect = 6e-11
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
ED + +S Q + EEEDEE E+E++ E ED EEEE +EEE+E+E+ E +++++E
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Query: 231 EEEEE 235
EEEEE
Sbjct: 301 EEEEE 305
Score = 62.0 bits (149), Expect = 5e-10
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 170 PEDQEAP---DSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDK 226
PED E ++ D + ED E+ + EEE +EEE+E+E+ E D+++
Sbjct: 218 PEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEE 277
Query: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEES 256
+E EEEEE +++E++E+E+E+EEEEE+
Sbjct: 278 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEA 307
Score = 55.1 bits (131), Expect = 7e-08
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 4/54 (7%)
Query: 186 DKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLD 239
D+EEE+EE E+E+D E E+ EEEE +EEE+E+E +++++E EEEEE D
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEE----EEEEEEEEEEEEEAAPD 310
Score = 54.7 bits (130), Expect = 9e-08
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 173 QEAPDSDAQVDGVD----KEEEDEEGEDEKDXENED----GEEEELDEEEDEDEDVEGDD 224
QEA + A +G + E+ EE + ++D E+ EE + + + +
Sbjct: 199 QEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHE 258
Query: 225 DKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
++DE EEEEE + +E++E+E+E+EEEEE + E + E ++EE+
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 305
Score = 52.8 bits (125), Expect = 3e-07
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
+ E++E + + + D ++EEE+EE E+E++ E E+ EEEE +EEE+ DV +D
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSH 319
Query: 229 VSEEE--------------EEFGLDKDEDDEDEDEDEEEEES 256
S ++ E + + D+D+DED +S
Sbjct: 320 TSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKS 361
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 38/110 (34%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDE------------ 218
E+ E + + + + D+EEE+EE E+E++ E E+ EEEE +EEE+E+E
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTS 318
Query: 219 --------------------------DVEGDDDKDEVSEEEEEFGLDKDE 242
+V DDDKDE + + D+ E
Sbjct: 319 HTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESE 368
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 64.3 bits (155), Expect = 1e-10
Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 144 EVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENE 203
EV + + E + LL +L ++ E++E + + + +EEE+ E+E+ E E
Sbjct: 2219 EVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEE-----REEEEVREEEEERKEEE 2273
Query: 204 DGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFG-----LDKDEDDEDEDEDEEEEESGK 258
+GEE+++++EE+E + + + K+EV E+EE F + ++E + DE+EEEE
Sbjct: 2274 EGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESCSL 2333
Query: 259 GENRKRETD 267
E RE +
Sbjct: 2334 EEEVDREKE 2342
Score = 60.1 bits (144), Expect = 2e-09
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 165 LDTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDD 224
+D + E+ + + ++ +D ++K+E E+E+ E E+ EEEE+ EEE+E ++ E +
Sbjct: 2217 VDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGE 2276
Query: 225 DKDEVSEEEEEFGLDKDEDDEDEDEDE---EEEESGKGENRKRETDDEED 271
+K EEEE+ K++ E+ E E EE+E E DEE+
Sbjct: 2277 EKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEE 2326
Score = 55.1 bits (131), Expect = 7e-08
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 172 DQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSE 231
D+ +QVD V+ EE E + E E E +EEE+ +E+ E ++ +EV E
Sbjct: 2207 DKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREE--EEVRE 2264
Query: 232 EEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
EEEE +++ +++ +++EEE++ K E +K E ++E+
Sbjct: 2265 EEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEE 2304
Score = 46.6 bits (109), Expect = 2e-05
Identities = 25/95 (26%), Positives = 53/95 (55%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
+ E++ + + + V+KEEE+++ + ++ + E E+EE+ EE++E E + +
Sbjct: 2264 EEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSD 2323
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRK 263
EEEE L+++ D E E +E++ + + RK
Sbjct: 2324 EEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRK 2358
Score = 45.1 bits (105), Expect = 7e-05
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 179 DAQVDGVDKEE-----------EDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKD 227
D + G+++EE E +K E + +E++ EE E++E D+
Sbjct: 2178 DEEEGGIEEEEVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDE- 2236
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEE 270
E++E +++E+ E+E+E EEEE + E RK E + EE
Sbjct: 2237 --LEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEE 2277
Score = 42.7 bits (99), Expect = 3e-04
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 187 KEEEDEEGEDEKDXENEDGEEEELDEEEDED-EDVEGDDDKDEVSEEEEEFGLDKDEDDE 245
K +E + G+ K+ + +E E +E E+ E + + +K E EEE +++E+ E
Sbjct: 2199 KRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEERE 2258
Query: 246 DEDEDEEEE---ESGKGENRKRETDDEE 270
+E+ EEEE E +GE ++ E ++EE
Sbjct: 2259 EEEVREEEEERKEEEEGEEKQVEKEEEE 2286
Score = 41.6 bits (96), Expect = 7e-04
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 173 QEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEE 232
+E P + +D +KE E E E D E +EEEL++EE + + +K +++EE
Sbjct: 1698 EELPQREQNLDWQEKELAQELEELEWDMEELSWKEEELNQEEGKLVE-----EKKKLAEE 1752
Query: 233 EEEFGLDKDEDDEDEDEDEEEEE 255
EE +++ E+E + +EEE
Sbjct: 1753 EEALAWQREKLSEEETKLAQEEE 1775
Score = 40.8 bits (94), Expect = 0.001
Identities = 25/97 (25%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
E++E + + + E+E+EE + +K E + E +E +E +E E++ +++ + +S
Sbjct: 2264 EEEEERKEEEEGEEKQVEKEEEE-KKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLS 2322
Query: 231 -EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRET 266
EEEEE +E+ + E E ++E+ K + ++R++
Sbjct: 2323 DEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRKS 2359
Score = 31.2 bits (69), Expect = 1.0
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 144 EVINLNDYQESVFKLLPQLTCLD-TYDPED-QEAPDSDAQVDGVDKEEEDEEGED-EKDX 200
EV + +E V K +L ++ T +D ++A D QV G ++ E+ EK
Sbjct: 1430 EVEEMATLEEKVVKQEGKLVMIERTPSWQDWKKAWDEWKQVHGETRKSWKAWKEEWEKRL 1489
Query: 201 ENEDGEEEELDEEEDEDEDVEGDDDK---DEVSEEEEEFGLDKDEDDEDEDEDE---EEE 254
E+ + + E+ +E++ +D K +E + E K ++ + +DE+E EEE
Sbjct: 1490 LQEEEKLHQAGEKLSPEEEMLQEDKKLKWEEWKQVWENMLSSKSKEQQYKDEEEVTLEEE 1549
Query: 255 ESGKGENRKRETDDEE 270
S +GE ++++ +E+
Sbjct: 1550 VSREGEEKEQQVTEEQ 1565
Score = 30.0 bits (66), Expect = 2.2
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 180 AQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLD 239
A+V + ++ +E + E +N D +E+EL +E +E E D +E+S +EEE +
Sbjct: 1687 AEVKNILAQKVEELPQRE---QNLDWQEKELAQELEELEW-----DMEELSWKEEELNQE 1738
Query: 240 KDEDDEDEDEDEEEEESGKGENRKRETDD 268
+ + E++ + EEEE+ + K ++
Sbjct: 1739 EGKLVEEKKKLAEEEEALAWQREKLSEEE 1767
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 64.3 bits (155), Expect = 1e-10
Identities = 30/92 (32%), Positives = 55/92 (59%)
Query: 180 AQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLD 239
A +G KEE + + E E++ E+E GEE E +EE + +E+ E +++ ++ S+EE E +
Sbjct: 71 ADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSE 130
Query: 240 KDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
++ +DE E E EE+ + + ET+ E +
Sbjct: 131 EEMEDEQESEAEEDNQEEGESEAEGETEAESE 162
Score = 57.4 bits (137), Expect = 1e-08
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGED-EKDXENEDGEEEELDEEEDEDEDVEGDDDKD 227
D E +++ +V+ ++E E E GE+ E + E+E EE E +EE +++ D E ++D +
Sbjct: 72 DGEGAGKEEAEVKVEQ-EREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSE 130
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEES 256
E E+E+E ++D +E E E E E E+
Sbjct: 131 EEMEDEQESEAEEDNQEEGESEAEGETEA 159
Score = 54.7 bits (130), Expect = 9e-08
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 177 DSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEF 236
+ + + + ++ E +EE E E++ E E+ E+E DEE +ED + E +D+++ +EE
Sbjct: 88 EREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEE---- 143
Query: 237 GLDKDEDDEDEDEDEEEEES 256
D E+ E E E E E ES
Sbjct: 144 --DNQEEGESEAEGETEAES 161
Score = 52.4 bits (124), Expect = 4e-07
Identities = 27/93 (29%), Positives = 52/93 (55%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
E + +S+A + +EE + E E E + E+ED +EE +E+ +E+ + E + + +E +
Sbjct: 86 EQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDN 145
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRK 263
+EE E + + + E E + E E E+ + RK
Sbjct: 146 QEEGESEAEGETEAESEFDPEIEMEAERVAKRK 178
Score = 51.2 bits (121), Expect = 9e-07
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEE----DEDEDVEGDD 224
+ E E +S+ + + ++ E +EE EDE D E+E+ EEE+++E+ +ED EG+
Sbjct: 92 ESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGES 151
Query: 225 DKDEVSEEEEEF 236
+ + +E E EF
Sbjct: 152 EAEGETEAESEF 163
Score = 35.4 bits (80), Expect = 0.053
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXE-NEDGEEEELDEEEDEDEDVEGDDDKD 227
+ E + +S+ + D +E+ +EE EDE++ E ED +EE E E E E D +
Sbjct: 108 EEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEI 167
Query: 228 EVSEE 232
E+ E
Sbjct: 168 EMEAE 172
Score = 31.2 bits (69), Expect = 1.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEE 213
D D E +E + + + + + EED + E E + E E E E D E
Sbjct: 119 DESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPE 166
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 63.2 bits (152), Expect = 2e-10
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 24/122 (19%)
Query: 170 PEDQEAPDSDAQVDGVDKEEEDEEGED-------EKDXENEDGEEEELDEEEDEDEDVEG 222
P+D E V G DKEE+ ED +++ ++G+ + E E+E ++ EG
Sbjct: 191 PDDDEDDPVPLPVSG-DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE-EG 248
Query: 223 DDDKDEVSEEEEEFGLDKDEDD------------EDEDEDEEEEESGKGENRKRETDDEE 270
++D+D+V EEEE D+DEDD EDE+E+ EE+E G+G++ + +E
Sbjct: 249 EEDEDDVDVEEEE---DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDE 305
Query: 271 DG 272
DG
Sbjct: 306 DG 307
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEE--DEDEDVEGD 223
D + E+++ + + D VD EEE++E ED++ + EEEE DEEE +EDE+ EGD
Sbjct: 236 DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGD 295
Query: 224 DDKDEVSEEEE 234
D +++S +E+
Sbjct: 296 DGYEQISSDED 306
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 166 DTYDPEDQEAPDSDAQ--VDGV-DKEEEDEEGEDEKDXENE-DGEEEELDEEEDEDEDVE 221
D D E++E D D + VD + ++EEEDEE E E+D E E D E++ +ED D+E
Sbjct: 253 DDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLE 312
Query: 222 GDDDK 226
+ K
Sbjct: 313 RETFK 317
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 63.2 bits (152), Expect = 2e-10
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 24/122 (19%)
Query: 170 PEDQEAPDSDAQVDGVDKEEEDEEGED-------EKDXENEDGEEEELDEEEDEDEDVEG 222
P+D E V G DKEE+ ED +++ ++G+ + E E+E ++ EG
Sbjct: 191 PDDDEDDPVPLPVSG-DKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQE-EG 248
Query: 223 DDDKDEVSEEEEEFGLDKDEDD------------EDEDEDEEEEESGKGENRKRETDDEE 270
++D+D+V EEEE D+DEDD EDE+E+ EE+E G+G++ + +E
Sbjct: 249 EEDEDDVDVEEEE---DEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDE 305
Query: 271 DG 272
DG
Sbjct: 306 DG 307
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEE--DEDEDVEGD 223
D + E+++ + + D VD EEE++E ED++ + EEEE DEEE +EDE+ EGD
Sbjct: 236 DEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGD 295
Query: 224 DDKDEVSEEEE 234
D +++S +E+
Sbjct: 296 DGYEQISSDED 306
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 166 DTYDPEDQEAPDSDAQ--VDGV-DKEEEDEEGEDEKDXENE-DGEEEELDEEEDEDEDVE 221
D D E++E D D + VD + ++EEEDEE E E+D E E D E++ +ED D+E
Sbjct: 253 DDVDVEEEEDEDEDDRRTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLE 312
Query: 222 GDDDK 226
+ K
Sbjct: 313 RETFK 317
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 62.0 bits (149), Expect = 5e-10
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 167 TYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDK 226
T +D + D V D EEED+ DE D E+ED EE+E D+++DED+ GD+ +
Sbjct: 1930 TTSSQDGQGKGDDVIVIDSDDEEEDD---DENDGEHEDYEEDEEDDDDDEDDTGMGDEGE 1986
Query: 227 DEVSEEEEEFGLDKDEDDEDEDED------EEEEESGKGENRKRETDDEEDG 272
D G D E D+ E D E EE G GE R D + G
Sbjct: 1987 DSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGEGNHRAADSQNSG 2038
Score = 54.7 bits (130), Expect = 9e-08
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 118 KKLKDISTLEPLKKLECLKSLD-LFNCEVINLNDYQESVFKLLPQLTCLDTYDP-EDQEA 175
KKLK ++ + +++ +S D +V N D Q+S+ + + Q Y P ED E
Sbjct: 1857 KKLKSVTPVGTEEEVMAEESTDGEVETQVYN-QDSQDSIGEGVTQ----GDYTPMEDSEE 1911
Query: 176 PDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEE 235
Q+D + + + +D + + + +D +++E++D E D + ++ E+EE+
Sbjct: 1912 TSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEEDEED 1971
Query: 236 FGLDKDEDDE---DEDEDEEEEESGKGENRKRETDDEEDG 272
D DEDD DE ED E N E DD E G
Sbjct: 1972 D--DDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGG 2009
Score = 36.2 bits (82), Expect = 0.031
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
D D E D + + D +E+D DE + NE G + E +D EG D D
Sbjct: 1956 DENDGEHEDYEEDEEDDDDDEDDTGMGDEGEDSNE-GTGSADGNDGYEADDAEGGDGTDP 2014
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGEN 261
+E EE G + + ++ E +G E+
Sbjct: 2015 GTETEESMGGGEGNHRAADSQNSGEGNTGAAES 2047
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 61.2 bits (147), Expect = 9e-10
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 17/117 (14%)
Query: 173 QEAPDSDAQVDGVDKEEEDEEGEDEKDXEN-----------EDGEEEELDEEEDEDEDVE 221
+E D + DG + + +E+GED K+ E+ EDG+E+ DE+E+ED
Sbjct: 146 KEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKET 205
Query: 222 GDDDKDEVSEEEEEFGLDKD---EDDEDEDEDEEEEESGKGENRKRETDD---EEDG 272
GD ++E +E+ + KD ++DE E ED +E+E G E +E +D EE+G
Sbjct: 206 GDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEG 262
Score = 57.8 bits (138), Expect = 1e-08
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Query: 187 KEEEDEEGEDEKDXENEDGE--EEELDE--EEDEDEDVEGDDDKDEVSEEEE----EFGL 238
K EE+++ EDE+D E GE +E+ DE EED ED G++ ++ E+E+ E G
Sbjct: 124 KNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGK 183
Query: 239 DKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
ED +++ EDE+EEE K +E +D ++
Sbjct: 184 GNGEDGKEKGEDEKEEEDRKETGDGKENEDGKE 216
Score = 57.4 bits (137), Expect = 1e-08
Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
ED + D + G D++EE++ E ENEDG+E+ D++E +D V+ +D+K+
Sbjct: 180 EDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKG-DKKEGKDVKVK-EDEKERED 237
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+E+E G +++ E ED EEEE GK E+ +E D +++
Sbjct: 238 GKEDEGGNEEEAGKEKEDLKEEEE--GKEEDEIKEDDGKKE 276
Score = 55.8 bits (133), Expect = 4e-08
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENE-DGEEEELDEEEDEDEDVEGDDDKD 227
+ EDQ+ + D EE+ E G+++KD + E DG+E++ E+ ED + D K
Sbjct: 126 EEEDQKEDEED------QNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKG 179
Query: 228 EVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEEDG 272
E + E G +K E DE E+ED +E GK +E D+++G
Sbjct: 180 EDGKGNGEDGKEKGE-DEKEEEDRKETGDGKENEDGKEKGDKKEG 223
Score = 53.9 bits (128), Expect = 1e-07
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
ED+E D + + KE++DE+GE++ E+++G E+ D +E ED +G+D K
Sbjct: 132 EDEE--DQNEEKGEAGKEDKDEKGEED-GKEDKNGNEKGEDAKEKEDGK-KGEDGKGNGE 187
Query: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDD 268
+ +E+ +K+E+D E D +E E GK + K+E D
Sbjct: 188 DGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKD 225
Score = 52.4 bits (124), Expect = 4e-07
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 144 EVINLNDYQESVFKLLPQLTCLDTYDPEDQEAPDS---DAQVDGVDKEEE-----DEEGE 195
E + DY E+ ++T + E E + DA G +K+E E E
Sbjct: 69 EAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEE 128
Query: 196 DEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDED-EDEEEE 254
D+K+ E + EE+ +ED+DE E D +D+ E+ E +K++ + ED + E+
Sbjct: 129 DQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGED 188
Query: 255 ESGKGENRKRETDDEEDG 272
KGE+ K E D +E G
Sbjct: 189 GKEKGEDEKEEEDRKETG 206
Score = 45.4 bits (106), Expect = 5e-05
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 13/110 (11%)
Query: 173 QEAPDSDAQVDGVDKEE---EDEEGEDEKDXENE-------DGEEEELDEEEDEDEDVEG 222
+E D+ AQ K+E E++ E+ K+ E + + E E+ EE ED +G
Sbjct: 53 EENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKG 112
Query: 223 DDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGK-GENRKRETDDEED 271
+ K+ V+ E + ++D+ +++ED++EE+ E+GK ++ K E D +ED
Sbjct: 113 GEKKEAVAAEVKNE--EEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKED 160
Score = 45.4 bits (106), Expect = 5e-05
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 16/94 (17%)
Query: 166 DTYDPEDQ-EAPDSDAQVDGVDKEEEDEEGED----EKDXENEDGEEEELDEEEDEDEDV 220
D + ED+ E D DG +K ++ +EG+D E + E EDG+E+E EE
Sbjct: 195 DEKEEEDRKETGDGKENEDGKEKGDK-KEGKDVKVKEDEKEREDGKEDEGGNEE------ 247
Query: 221 EGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEE 254
E +K+++ EEEE K+ED+ ED+ ++EE
Sbjct: 248 EAGKEKEDLKEEEE----GKEEDEIKEDDGKKEE 277
Score = 32.0 bits (71), Expect = 0.59
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 24/110 (21%)
Query: 187 KEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDE- 245
K + EE D + ++E + EE+ + G+ E E+E K+E+ E
Sbjct: 48 KSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPASEKEIVEVKEENIED 107
Query: 246 ---------------------DEDEDEEEEESGKGENRKRETDD--EEDG 272
D+ EDEE++ KGE K + D+ EEDG
Sbjct: 108 ATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDG 157
Score = 28.1 bits (61), Expect = 8.5
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEV 229
ED++ + + +G ++EE +E ED K+ EEE +E+E +++D + ++ + V
Sbjct: 230 EDEKEREDGKEDEGGNEEEAGKEKEDLKE------EEEGKEEDEIKEDDGKKEEPQSIV 282
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 61.2 bits (147), Expect = 9e-10
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 151 YQESVFKLLPQLTCLDTYDPEDQEAPDSDAQVDGVDKEEEDE---EGEDEKDXENEDGEE 207
Y++ K +PQ + + GV ++EE E E+E+D E+ ++
Sbjct: 446 YEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDD 505
Query: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
E ++E E VEG+ EV E EE +++E++EDE+ +EEEEE G+ E + + +
Sbjct: 506 WEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEE 565
Query: 268 DEE 270
DE+
Sbjct: 566 DEK 568
Score = 59.7 bits (143), Expect = 3e-09
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
Query: 166 DTYDP--EDQEAPDSDAQVDGVDK-------EEEDEEGEDEKDXENEDGEEEELDEEEDE 216
DT D +D EA SD + + V+ +E EE E+E++ E ED E EE +EEE E
Sbjct: 497 DTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGE 556
Query: 217 DEDVEGDDDKDEVSEEEEE-FGLDK---------DEDDEDEDEDEEEEESGKGENR 262
E EGD++ ++VS+E++ LDK E D D+D +EE K + R
Sbjct: 557 SEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDKAKRR 612
Score = 55.8 bits (133), Expect = 4e-08
Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
+PE++E + DA +D + DEE E + + +E +EEE+E+E+ E D++ +E
Sbjct: 491 EPEEEEDTE-DAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEE 549
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
EEEEE + E DE++++ +E++SGK ++K + D
Sbjct: 550 --EEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSD 590
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/85 (22%), Positives = 44/85 (51%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
D E +E + + + +G + +EEDE+ DEKD ++ + D + D + D K+E
Sbjct: 544 DEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEE 603
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEE 253
+ ++ + ++K + ++ + E+
Sbjct: 604 RAYDKAKRRIEKRRLEHSKNVNTEK 628
Score = 38.5 bits (88), Expect = 0.006
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
+ +++E D + + K +E EE E K +++ E + EEE V D
Sbjct: 234 EKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIP 293
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEE 270
SEE+ E EDD + D+ +++++ KGE ++E + ++
Sbjct: 294 ASEEKAETP-TAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKK 334
Score = 36.2 bits (82), Expect = 0.031
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 18/109 (16%)
Query: 176 PDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEE 235
P S+ + + E+D EG+ +K +D ++++ ++EE E E +G K V +E
Sbjct: 293 PASEEKAETPTAAEDDNEGDKKK----KDKKKKKGEKEEKEKEKKKG-PSKATVKAMQEA 347
Query: 236 FGLDKDEDDEDEDEDEE-------------EEESGKGENRKRETDDEED 271
K+E++ + E+EE EEE + E R+R+ E++
Sbjct: 348 LAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKE 396
Score = 35.8 bits (81), Expect = 0.041
Identities = 23/105 (21%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 167 TYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDK 226
T D D +A ++ + G KE+E ++ + +K E + +++ DE++ E E +
Sbjct: 13 TKDDIDLDALAAEIEGAGAAKEQEPQKSKGKKKKEKK---KQDFDEDDILKELEELSLEA 69
Query: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+ + E + E++E+E +++++ KG+ K+++ D+ D
Sbjct: 70 QGIKADRETVAVKPTENNEEEFTSKDKKK--KGQKGKKQSFDDND 112
Score = 33.9 bits (76), Expect = 0.16
Identities = 23/107 (21%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 171 EDQEAPDSDAQVDGVDKEEEDEEGE-DEKDXENEDG----------------EEEELDEE 213
E A + D + D K+++ ++GE +EK+ E + G +EEE ++
Sbjct: 300 ETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQK 359
Query: 214 EDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGE 260
+E+E ++ ++ + +EEE +K E + ++++ +E +G+
Sbjct: 360 REEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGK 406
Score = 33.1 bits (74), Expect = 0.27
Identities = 23/106 (21%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 177 DSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDED-----EDVEGDDDKDEVSE 231
+++ + DK+++ ++G+ + +N+ E E+ D + + E G DD D+ ++
Sbjct: 86 NNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNK 145
Query: 232 -EEEEFGLDKDEDDEDEDEDEEEEESGKGENRKR-----ETDDEED 271
++ G + + + + +E+E+ S K + R R E+ DE D
Sbjct: 146 LPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESD 191
Score = 32.7 bits (73), Expect = 0.35
Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 178 SDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFG 237
+D + V E +EE KD + + + ++ ++++ E++E D K + + +
Sbjct: 74 ADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSK-KTAKPKVE 132
Query: 238 LDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+ DD+D+ ++ GK + ++ D E+
Sbjct: 133 MYSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEE 166
Score = 29.6 bits (65), Expect = 2.9
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
D D E+ E DS ++ K E G D+ D N+ ++ + ++ + ++D
Sbjct: 109 DDNDSEELEDKDSKSKKTAKPKVEM-YSGSDDDDDFNKLPKKAKGKAQKSNKKWDGSEED 167
Query: 226 KDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKR------ETDDEED 271
+D + +E ++ + DE ++ + G+ +N+K E+ +E+D
Sbjct: 168 EDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDD 219
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/94 (19%), Positives = 44/94 (46%)
Query: 174 EAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEE 233
+A S+ + DG +++E++ + E+ N GE + +E + + + K++
Sbjct: 153 KAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNI 212
Query: 234 EEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
E D D + + +++ E + E +KR+ +
Sbjct: 213 ESGNEDDDASFKIKTVAQKKAEKKERERKKRDEE 246
Score = 28.5 bits (62), Expect = 6.5
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDE 228
D + + D + +KEE+++E + +E L + ++E+E
Sbjct: 307 DDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEER--------- 357
Query: 229 VSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
+ EEE + + E+ E + ++EE E K E +K++ + ++
Sbjct: 358 -QKREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKE 399
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 60.8 bits (146), Expect = 1e-09
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 168 YDPEDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDE------EEDEDEDVE 221
Y+ Q + + + + ++EE++EE +DE D + +D +E + D+ EED++ +
Sbjct: 1387 YEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENA 1446
Query: 222 GDDDKDEVSEEEEEFG--LDKDEDDEDEDEDEEEE-ESGKGENRKRETDDEED 271
G+D ++ S +EE L++ ED EDED D +EE E G+ + D ED
Sbjct: 1447 GEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLED 1499
Score = 50.4 bits (119), Expect = 2e-06
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 197 EKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEE-EEFGLDKDEDDEDEDEDEEEEE 255
E + E ED EEEE + EED+DED + DD DE+ ++ E L++D+++E+ ED + +
Sbjct: 1396 EDEDEEEDQEEEEQE-EEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDF 1454
Query: 256 SGKGENRKRETDDEEDG 272
S E ++ EDG
Sbjct: 1455 SPSDEELANLLEEGEDG 1471
Score = 46.2 bits (108), Expect = 3e-05
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 169 DPEDQEAPDSDAQVDGVDKEEEDE-------EGEDEKDXENEDGEEEELDEEEDEDEDV- 220
D E++E + D D D ++ DE E E E+D NE+ E+ ++ DE++
Sbjct: 1403 DQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELA 1462
Query: 221 ----EGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEE 254
EG+D +DE S+ +EE L + D ++ D E++
Sbjct: 1463 NLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD 1500
Score = 35.4 bits (80), Expect = 0.053
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 166 DTYDPEDQEAPDSDAQVDGVDKEEEDEE--GEDEKDX-------------ENEDGEEEEL 210
D D +D + D+D ++ +E+++ E GED + E EDGE+E+
Sbjct: 1417 DDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEDGEDEDS 1476
Query: 211 DEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDE 242
D +E E E + GD D + S+ E++ L +E
Sbjct: 1477 DADE-EVELILGDTDSSDNSDLEDDIILSLNE 1507
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.132 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,691,778
Number of Sequences: 37866
Number of extensions: 787469
Number of successful extensions: 55795
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 537
Number of HSP's that attempted gapping in prelim test: 7515
Number of HSP's gapped (non-prelim): 19008
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.