Search of human proteins with 239750861

Search of human proteins with 239750861

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo
sapiens]
         (190 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo ...   394   e-110
gi|117168248 protein tyrosine phosphatase-like A domain containi...   365   e-101
gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform ...    48   6e-06
gi|148226324 protein tyrosine phosphatase-like A domain containi...    46   2e-05
gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform ...    43   1e-04
gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2...    43   1e-04
gi|23308579 prostaglandin-E synthase 3 [Homo sapiens]                  39   0.002
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ...    35   0.030
gi|157694511 nucleolar complex associated 2 homolog [Homo sapiens]     33   0.11 
gi|75677376 coiled-coil domain containing 62 isoform b [Homo sap...    32   0.43 
gi|30348972 coiled-coil domain containing 62 isoform a [Homo sap...    32   0.43 
gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform ...    31   0.56 
gi|16975496 cortactin binding protein 2 [Homo sapiens]                 29   2.1  
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]                   29   2.8  
gi|122937396 coiled-coil domain containing 150 [Homo sapiens]          28   3.6  
gi|131889447 cancer susceptibility candidate 1 isoform c [Homo s...    28   4.8  
gi|131888105 cancer susceptibility candidate 1 isoform a [Homo s...    28   4.8  
gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]        28   4.8  
gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]         28   4.8  
gi|35493853 otoferlin isoform c [Homo sapiens]                         28   6.2  
gi|35493868 otoferlin isoform b [Homo sapiens]                         28   6.2  
gi|34740331 otoferlin isoform a [Homo sapiens]                         28   6.2  
gi|28076869 serine (or cysteine) proteinase inhibitor, clade B (...    28   6.2  
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa...    28   6.2  
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap...    28   6.2  
gi|110238585 hypothetical protein LOC84734 [Homo sapiens]              28   6.2  
gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens]         27   8.1  
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]         27   8.1  
gi|113204622 stromal membrane-associated GTPase-activating prote...    27   8.1  
gi|8923842 forkhead box J2 [Homo sapiens]                              27   8.1  

>gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo
           sapiens]
          Length = 190

 Score =  394 bits (1011), Expect = e-110
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
           MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE
Sbjct: 1   MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60

Query: 61  FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
           FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL
Sbjct: 61  FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120

Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKGNP 180
           RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKGNP
Sbjct: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKGNP 180

Query: 181 FMTHSILWLT 190
           FMTHSILWLT
Sbjct: 181 FMTHSILWLT 190


>gi|117168248 protein tyrosine phosphatase-like A domain containing
           1 [Homo sapiens]
          Length = 362

 Score =  365 bits (936), Expect = e-101
 Identities = 177/177 (100%), Positives = 177/177 (100%)

Query: 1   MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60
           MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE
Sbjct: 1   MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLE 60

Query: 61  FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
           FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL
Sbjct: 61  FLDLVKPEPVYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120

Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGK 177
           RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGK
Sbjct: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGK 177


>gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform 1
           [Homo sapiens]
          Length = 586

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 6/137 (4%)

Query: 12  WAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKPEPVY 71
           W  R R +++   + D  +  + I ++ + F  +   A G  +Y   +EF   V  +   
Sbjct: 53  WYDRPRYVFMEFCVEDSTDVHVLIEDHRIVFSCKN--ADGVELYN-EIEFYAKVNSKDSQ 109

Query: 72  -KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERL 128
            K + R +   V+K K    W RLTK++ +P++L+ DFD W D E D EMEL   E    
Sbjct: 110 DKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAE 169

Query: 129 NKLRLESEGSPETLTNL 145
              ++ ++  P  + +L
Sbjct: 170 LLKKVSTKRPPPAMDDL 186


>gi|148226324 protein tyrosine phosphatase-like A domain containing
           2 [Homo sapiens]
          Length = 232

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 19/32 (59%), Positives = 23/32 (71%)

Query: 146 RKGYLFMYNLVQFLGFSWIFVNLTVRFCILGK 177
           +  YLF+Y L+QF G SWIF N+TVRF   GK
Sbjct: 16  KNAYLFIYYLIQFCGHSWIFTNMTVRFFSFGK 47


>gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform 4
           [Homo sapiens]
          Length = 161

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 72  KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129
           K + R +   V+K K    W RLTK++ +P++L+ DFD W D E D EMEL   E     
Sbjct: 73  KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 132

Query: 130 KLRLESEGSPETLTNL 145
             ++ ++  P  + +L
Sbjct: 133 LKKVSTKRPPPAMDDL 148


>gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2
           [Homo sapiens]
          Length = 525

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 72  KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129
           K + R +   V+K K    W RLTK++ +P++L+ DFD W D E D EMEL   E     
Sbjct: 50  KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 109

Query: 130 KLRLESEGSPETLTNL 145
             ++ ++  P  + +L
Sbjct: 110 LKKVSTKRPPPAMDDL 125


>gi|23308579 prostaglandin-E synthase 3 [Homo sapiens]
          Length = 160

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 13/128 (10%)

Query: 12  WAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDL---VKP- 67
           W  R   +++   + D ++  ++  ++ L F   G    G + ++ HL  +DL   + P 
Sbjct: 8   WYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLG----GSDNFK-HLNEIDLFHCIDPN 62

Query: 68  EPVYKLTQRQVNITVQKKVS-QWWERLTKQEKRPLFLAPDFDRWL---DESDAEMELRAK 123
           +  +K T R +   ++K  S Q W RLTK+  +  +L+ DF+ W    D+SD +M    +
Sbjct: 63  DSKHKRTDRSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDR 122

Query: 124 EEERLNKL 131
             E +N +
Sbjct: 123 FSEMMNNM 130


>gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo
            sapiens]
          Length = 2346

 Score = 35.4 bits (80), Expect = 0.030
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 19/129 (14%)

Query: 21   LRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKPEPVYKLTQRQVNI 80
            LR  L +V   ++     +    A G  A GD+  +   EF D ++ E  +   Q+ V +
Sbjct: 913  LRSRLEEVLGRSLERLNRLETLAAIGGAAAGDDTEDTSTEFTDSIEEEAAHHSHQQLVKV 972

Query: 81   TVQKKVSQWWERLTKQEKRPLFLAP-----DFDRWLDES--------DAEMELRAKEEER 127
             ++K ++      T + + P F  P     D +R L E            +E + K EE 
Sbjct: 973  ALEKSLA------TVETQNPSFSPPSPMGGDSNRCLQEEMLHLRAEFHQHLEEKRKAEEE 1026

Query: 128  LNKLRLESE 136
            L +L+ + E
Sbjct: 1027 LKELKAQIE 1035


>gi|157694511 nucleolar complex associated 2 homolog [Homo sapiens]
          Length = 749

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 60  EFLDLVKPEPVYKLTQRQ-VNITV-QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAE 117
           + L  V+    Y  ++RQ V+  V +++  + WE+LT++E  PL L   +  W    D E
Sbjct: 572 QLLGKVQENSAYICSRRQRVSFGVSEQQAVEAWEKLTREEGTPLTLY--YSHWRKLRDRE 629

Query: 118 MELRAKEEERLNKL 131
           ++L    +ERL  L
Sbjct: 630 IQLEISGKERLEDL 643


>gi|75677376 coiled-coil domain containing 62 isoform b [Homo
           sapiens]
          Length = 684

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 64  LVKPEPVYKLTQRQVNITVQKKVSQWWERLTK---QEKRPLFLAPDFDRWLDESDAEMEL 120
           +VK +  YK   + + I V K      E+ T+   Q +  + L  +     DE    +E 
Sbjct: 201 IVKEKQDYKQKLKALKIEVNKLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELLFTVER 260

Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFS 162
             +++E LN  + + E +   L NLR+ Y+   + +QFL F+
Sbjct: 261 EKRKDELLNIAKSKQERTNSELHNLRQIYVKQQSDLQFLNFN 302


>gi|30348972 coiled-coil domain containing 62 isoform a [Homo
           sapiens]
          Length = 682

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 64  LVKPEPVYKLTQRQVNITVQKKVSQWWERLTK---QEKRPLFLAPDFDRWLDESDAEMEL 120
           +VK +  YK   + + I V K      E+ T+   Q +  + L  +     DE    +E 
Sbjct: 201 IVKEKQDYKQKLKALKIEVNKLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELLFTVER 260

Query: 121 RAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFS 162
             +++E LN  + + E +   L NLR+ Y+   + +QFL F+
Sbjct: 261 EKRKDELLNIAKSKQERTNSELHNLRQIYVKQQSDLQFLNFN 302


>gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform 3
           [Homo sapiens]
          Length = 166

 Score = 31.2 bits (69), Expect = 0.56
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 91  ERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLNKLRLESEGSPETLTNL 145
           E   K   +P++L+ DFD W D E D EMEL   E       ++ ++  P  + +L
Sbjct: 98  EFYAKVNSKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDL 153


>gi|16975496 cortactin binding protein 2 [Homo sapiens]
          Length = 1663

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 83  QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEME-LRAK---EEERLNKLRLESEGS 138
           +KK ++  E L+ +++R   +    ++ L E D E E LRAK   EE     L+ E +  
Sbjct: 203 KKKTNELEEELSAEKRRSTEMEAQMEKQLSEFDTEREQLRAKLNREEAHTTDLKEEIDKM 262

Query: 139 PETLTNLRKG 148
            + +  L++G
Sbjct: 263 RKMIEQLKRG 272


>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
          Length = 1417

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 14/73 (19%)

Query: 74   TQRQVNITVQKKVSQWWERLTKQEKRPLFLAPD----------FDRWLDESDAEMELRAK 123
            T RQV I    ++ Q+ E L+K EK  + L  D           D  LD++  E+E +  
Sbjct: 984  TARQVKI----EMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTELEKKTN 1039

Query: 124  EEERLNKLRLESE 136
              + L KL+  +E
Sbjct: 1040 AVKELEKLQHSTE 1052


>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
          Length = 1101

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 77  QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESE 136
           Q N  +Q K+    E+L  +E     L    DR  +ES  E EL A   ER+  LR + +
Sbjct: 780 QTNNHLQTKLDHIQEQLESKELERQNLETFKDRMTEESKVEAELHA---ERIEALRKQFQ 836

Query: 137 GSPET 141
              ET
Sbjct: 837 TERET 841


>gi|131889447 cancer susceptibility candidate 1 isoform c [Homo
           sapiens]
          Length = 690

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 84  KKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESE 136
           KK     +++TK E+  L    +  R  +E +A ++   +E ERL   R+E E
Sbjct: 64  KKSGSKKKKVTKAERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKE 116


>gi|131888105 cancer susceptibility candidate 1 isoform a [Homo
           sapiens]
          Length = 722

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 84  KKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESE 136
           KK     +++TK E+  L    +  R  +E +A ++   +E ERL   R+E E
Sbjct: 6   KKSGSKKKKVTKAERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKE 58


>gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)

Query: 109 RWLDESDAEMELRAKEEERLNK 130
           RW + +   +E+++KEEERLN+
Sbjct: 182 RWAERAHKVVEIKSKEEERLNQ 203


>gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]
          Length = 215

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)

Query: 109 RWLDESDAEMELRAKEEERLNK 130
           RW + +   +E+++KEEERLN+
Sbjct: 182 RWAERAHKVVEIKSKEEERLNQ 203


>gi|35493853 otoferlin isoform c [Homo sapiens]
          Length = 1307

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 25/111 (22%)

Query: 78   VNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKL------ 131
            V+I  QK+V  WW  L + E     L         + +AE+ L   EE   N +      
Sbjct: 1188 VSIFKQKRVKGWWPLLARNENDEFELT-------GKVEAELHLLTAEEAEKNPVGLARNE 1240

Query: 132  --RLESEGSPET-----LTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCIL 175
               LE    P+T     L  L+    F+++      + W+ + L +   +L
Sbjct: 1241 PDPLEKPNRPDTSFIWFLNPLKSARYFLWHT-----YRWLLLKLLLLLLLL 1286


>gi|35493868 otoferlin isoform b [Homo sapiens]
          Length = 1230

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 25/111 (22%)

Query: 78   VNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKL------ 131
            V+I  QK+V  WW  L + E     L         + +AE+ L   EE   N +      
Sbjct: 1111 VSIFKQKRVKGWWPLLARNENDEFELT-------GKVEAELHLLTAEEAEKNPVGLARNE 1163

Query: 132  --RLESEGSPET-----LTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCIL 175
               LE    P+T     L  L+    F+++      + W+ + L +   +L
Sbjct: 1164 PDPLEKPNRPDTSFIWFLNPLKSARYFLWHT-----YRWLLLKLLLLLLLL 1209


>gi|34740331 otoferlin isoform a [Homo sapiens]
          Length = 1997

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 25/111 (22%)

Query: 78   VNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKL------ 131
            V+I  QK+V  WW  L + E     L         + +AE+ L   EE   N +      
Sbjct: 1878 VSIFKQKRVKGWWPLLARNENDEFELT-------GKVEAELHLLTAEEAEKNPVGLARNE 1930

Query: 132  --RLESEGSPET-----LTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCIL 175
               LE    P+T     L  L+    F+++      + W+ + L +   +L
Sbjct: 1931 PDPLEKPNRPDTSFIWFLNPLKSARYFLWHT-----YRWLLLKLLLLLLLL 1976


>gi|28076869 serine (or cysteine) proteinase inhibitor, clade B
           (ovalbumin), member 4 [Homo sapiens]
          Length = 390

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 13/60 (21%)

Query: 51  GDNVYEFHLEFLDLVKPEPVYKLTQRQVNIT--------VQKKVSQWWERLTKQEKRPLF 102
           G+  Y+F  E+LD +K     K  Q  V  T         +KK++ W E  T ++ + LF
Sbjct: 109 GEKTYQFLQEYLDAIK-----KFYQTSVESTDFANAPEESRKKINSWVESQTNEKIKNLF 163


>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
           sapiens]
          Length = 1185

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 16/141 (11%)

Query: 16  HRELYLRVELSDVQNPAISITENVLHFKAQGH------GAKGDNVYEFHLEFLDLVKPEP 69
           H+EL +   L +  N   ++T+ VL    +        G +  +    H E  DL K   
Sbjct: 200 HKELMI---LKEQNNQKKTLTDGVLDINHEQENTPSTSGKRSSDGSLSHEE--DLAKVIE 254

Query: 70  VYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLN 129
           + ++  +Q      ++ SQ  ERL         L  D D    +     E+  K +  + 
Sbjct: 255 LQEIISKQ-----SREQSQMKERLASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRDVR 309

Query: 130 KLRLESEGSPETLTNLRKGYL 150
           +   + E   E +T L K YL
Sbjct: 310 EAMAQKEDMEERITTLEKRYL 330


>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
           sapiens]
          Length = 1202

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 16/141 (11%)

Query: 16  HRELYLRVELSDVQNPAISITENVLHFKAQGH------GAKGDNVYEFHLEFLDLVKPEP 69
           H+EL +   L +  N   ++T+ VL    +        G +  +    H E  DL K   
Sbjct: 200 HKELMI---LKEQNNQKKTLTDGVLDINHEQENTPSTSGKRSSDGSLSHEE--DLAKVIE 254

Query: 70  VYKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLN 129
           + ++  +Q      ++ SQ  ERL         L  D D    +     E+  K +  + 
Sbjct: 255 LQEIISKQ-----SREQSQMKERLASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRDVR 309

Query: 130 KLRLESEGSPETLTNLRKGYL 150
           +   + E   E +T L K YL
Sbjct: 310 EAMAQKEDMEERITTLEKRYL 330


>gi|110238585 hypothetical protein LOC84734 [Homo sapiens]
          Length = 163

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 20  YLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLD 63
           +LR EL ++Q     +   +L  +AQ H  K D     H E LD
Sbjct: 82  WLRRELREMQAQDRQLAGQLLRLRAQLHRLKMDQACHLHQELLD 125


>gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens]
          Length = 590

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 15/52 (28%), Positives = 30/52 (57%)

Query: 108 DRWLDESDAEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFL 159
           ++ + E + E  LR + E+RL ++ LESE +   + +L++ +  M   V+ L
Sbjct: 71  EKLIHELEEERHLRLQSEKRLQEVTLESERNRIQMRSLQQQFSRMEETVRNL 122


>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
          Length = 1909

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 15/52 (28%), Positives = 30/52 (57%)

Query: 108 DRWLDESDAEMELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFL 159
           ++ + E + E  LR + E+RL ++ LESE +   + +L++ +  M   V+ L
Sbjct: 71  EKLIHELEEERHLRLQSEKRLQEVTLESERNRIQMRSLQQQFSRMEETVRNL 122


>gi|113204622 stromal membrane-associated GTPase-activating protein
           1 isoform A [Homo sapiens]
          Length = 467

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 99  RPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESEGSPETLTNLRK 147
           +PL  +P     +D++  E E   K+EE+  +   E    P T   L+K
Sbjct: 147 QPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKEPEKPAKPLTAEKLQK 195


>gi|8923842 forkhead box J2 [Homo sapiens]
          Length = 574

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 134 ESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNL 168
           ES   P  L N    + F Y+ + F   SW F NL
Sbjct: 224 ESAEGPPPLYNTNHDFKFSYSEINFQDLSWSFRNL 258


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,411,790
Number of Sequences: 37866
Number of extensions: 313201
Number of successful extensions: 1125
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1100
Number of HSP's gapped (non-prelim): 36
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.