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Search of human proteins with 239750781
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750781 PREDICTED: golgi autoantigen, golgin subfamily
a-like [Homo sapiens]
(307 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750781 PREDICTED: golgi autoantigen, golgin subfamily a-li... 629 e-180
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 531 e-151
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 426 e-119
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 325 2e-89
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 323 9e-89
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 323 9e-89
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 320 8e-88
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 159 4e-39
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 147 9e-36
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 144 1e-34
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 143 2e-34
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 141 8e-34
gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-l... 125 4e-29
gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-l... 125 4e-29
gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-l... 125 4e-29
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 117 1e-26
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 114 8e-26
gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo ... 110 2e-24
gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-l... 99 5e-21
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l... 97 2e-20
gi|169208458 PREDICTED: similar to golgi autoantigen, golgin sub... 94 2e-19
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 94 2e-19
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 94 2e-19
gi|154937324 hypothetical protein LOC440295 [Homo sapiens] 94 2e-19
gi|169208016 PREDICTED: similar to golgi autoantigen, golgin sub... 94 2e-19
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 92 4e-19
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 91 2e-18
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 91 2e-18
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens] 90 3e-18
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 90 3e-18
>gi|239750781 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 307
Score = 629 bits (1622), Expect = e-180
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET
Sbjct: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
Query: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY
Sbjct: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
Query: 121 SQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGE 180
SQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGE
Sbjct: 121 SQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGE 180
Query: 181 LQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESE 240
LQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESE
Sbjct: 181 LQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESE 240
Query: 241 KSEIQLNVKELKRKLERAKFLLPQVSGCSPRGCGRPIQLGPWSRDHARYGEGPAKSWKIW 300
KSEIQLNVKELKRKLERAKFLLPQVSGCSPRGCGRPIQLGPWSRDHARYGEGPAKSWKIW
Sbjct: 241 KSEIQLNVKELKRKLERAKFLLPQVSGCSPRGCGRPIQLGPWSRDHARYGEGPAKSWKIW 300
Query: 301 VLVLVPP 307
VLVLVPP
Sbjct: 301 VLVLVPP 307
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 531 bits (1369), Expect = e-151
Identities = 264/265 (99%), Positives = 264/265 (99%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET
Sbjct: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
Query: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY
Sbjct: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
Query: 121 SQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGE 180
SQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGE
Sbjct: 121 SQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGE 180
Query: 181 LQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESE 240
LQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKL LAESE
Sbjct: 181 LQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLPLAESE 240
Query: 241 KSEIQLNVKELKRKLERAKFLLPQV 265
KSEIQLNVKELKRKLERAKFLLPQV
Sbjct: 241 KSEIQLNVKELKRKLERAKFLLPQV 265
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 426 bits (1094), Expect = e-119
Identities = 223/265 (84%), Positives = 224/265 (84%), Gaps = 38/265 (14%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGT ATDTKKKKIN+GTNPET
Sbjct: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTRATDTKKKKINNGTNPET 60
Query: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
TTS GCHSPED EKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY
Sbjct: 61 TTSEGCHSPED----------EKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 110
Query: 121 SQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGE 180
SQDAARKFEDGNL GESKDLAGRLHHSWHFAGE
Sbjct: 111 SQDAARKFEDGNL----------------------------GESKDLAGRLHHSWHFAGE 142
Query: 181 LQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESE 240
LQRALSAVST HKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESE
Sbjct: 143 LQRALSAVSTWHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESE 202
Query: 241 KSEIQLNVKELKRKLERAKFLLPQV 265
KSEIQLNVKELKRKLERAKFLLPQV
Sbjct: 203 KSEIQLNVKELKRKLERAKFLLPQV 227
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 325 bits (834), Expect = 2e-89
Identities = 177/276 (64%), Positives = 200/276 (72%), Gaps = 54/276 (19%)
Query: 1 MWPQPHLPPHP------------MMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTK 48
MWPQPHLP HP MMS++TRQ+KLAEAK++ TD+ VGT A+DTK
Sbjct: 88 MWPQPHLPTHPHLPTHPHLPTHPMMSKETRQSKLAEAKEQLTDHHPQTNPSVGTAASDTK 147
Query: 49 KKKINHGTNPETTTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILT 108
KKKIN+GTNPETTTSGGCHSPED E+KASHQHQEALRRE+EAQ HTIRILT
Sbjct: 148 KKKINNGTNPETTTSGGCHSPED----------EQKASHQHQEALRRELEAQVHTIRILT 197
Query: 109 CQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLA 168
CQKTEL+ ALYYSQ A ++ E GE++DL
Sbjct: 198 CQKTELQMALYYSQHAVKQLE--------------------------------GEARDLI 225
Query: 169 GRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNA 228
RLH SW FAGEL++ALSAV+T+ KKADRYIEELTKERDALSLELYRNTIT+EELK+KNA
Sbjct: 226 SRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNA 285
Query: 229 ELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQ 264
+LQEKL+L ESEKSEIQLNVKELKRKLERAK LLPQ
Sbjct: 286 KLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQ 321
Score = 29.3 bits (64), Expect = 4.6
Identities = 38/204 (18%), Positives = 82/204 (40%), Gaps = 13/204 (6%)
Query: 70 EDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFE 129
E+ + R L E + E L+ + ++++ +K+E++ + ++ RK E
Sbjct: 257 EELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVESEKSEIQLNV---KELKRKLE 313
Query: 130 DGNLGTPSSFNLALSQAFRGSPLGCVSTSL-IPGESKDLAGRLHHS-----WHFAGELQR 183
L P L G L VS L E +L RL+ W ++Q
Sbjct: 314 RAKLLLPQQ-QLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQE 372
Query: 184 ALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNA---ELQEKLRLAESE 240
+ + +K E++ ++ + + + E+++++ E +EK+R E
Sbjct: 373 WEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEM 432
Query: 241 KSEIQLNVKELKRKLERAKFLLPQ 264
E + ++EL+ K+ + + Q
Sbjct: 433 MWEKEEKIRELEEKMHEQEKIREQ 456
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 323 bits (829), Expect = 9e-89
Identities = 173/260 (66%), Positives = 196/260 (75%), Gaps = 42/260 (16%)
Query: 5 PHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSG 64
PHLP HPMMS++TRQ+KLAEAK++ TD+ VGT A+DTKKKKIN+GTNPETTTSG
Sbjct: 43 PHLPTHPMMSKETRQSKLAEAKEQLTDHHPQTNPSVGTAASDTKKKKINNGTNPETTTSG 102
Query: 65 GCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDA 124
GCHSPED E+KASHQHQEALRRE+EAQ HTIRILTCQKTEL+ ALYYSQ A
Sbjct: 103 GCHSPED----------EQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHA 152
Query: 125 ARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRA 184
++ E GE++DL RLH SW FAGEL++A
Sbjct: 153 VKQLE--------------------------------GEARDLISRLHDSWKFAGELEQA 180
Query: 185 LSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEI 244
LSAV+T+ KKADRYIEELTKERDALSLELYRNTIT+EELK+KNA+LQEKL+L ESEKSEI
Sbjct: 181 LSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVESEKSEI 240
Query: 245 QLNVKELKRKLERAKFLLPQ 264
QLNVKELKRKLERAK LLPQ
Sbjct: 241 QLNVKELKRKLERAKLLLPQ 260
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 323 bits (829), Expect = 9e-89
Identities = 173/260 (66%), Positives = 196/260 (75%), Gaps = 42/260 (16%)
Query: 5 PHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSG 64
PHLP HPMMS++TRQ+KLAEAK++ TD+ VGT A+DTKKKKIN+GTNPETTTSG
Sbjct: 43 PHLPTHPMMSKETRQSKLAEAKEQLTDHHPQTNPSVGTAASDTKKKKINNGTNPETTTSG 102
Query: 65 GCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDA 124
GCHSPED E+KASHQHQEALRRE+EAQ HTIRILTCQKTEL+ ALYYSQ A
Sbjct: 103 GCHSPED----------EQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHA 152
Query: 125 ARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRA 184
++ E GE++DL RLH SW FAGEL++A
Sbjct: 153 VKQLE--------------------------------GEARDLISRLHDSWKFAGELEQA 180
Query: 185 LSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEI 244
LSAV+T+ KKADRYIEELTKERDALSLELYRNTIT+EELK+KNA+LQEKL+L ESEKSEI
Sbjct: 181 LSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVESEKSEI 240
Query: 245 QLNVKELKRKLERAKFLLPQ 264
QLNVKELKRKLERAK LLPQ
Sbjct: 241 QLNVKELKRKLERAKLLLPQ 260
Score = 29.3 bits (64), Expect = 4.6
Identities = 38/204 (18%), Positives = 82/204 (40%), Gaps = 13/204 (6%)
Query: 70 EDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFE 129
E+ + R L E + E L+ + ++++ +K+E++ + ++ RK E
Sbjct: 196 EELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVESEKSEIQLNV---KELKRKLE 252
Query: 130 DGNLGTPSSFNLALSQAFRGSPLGCVSTSL-IPGESKDLAGRLHHS-----WHFAGELQR 183
L P L G L VS L E +L RL+ W ++Q
Sbjct: 253 RAKLLLPQQ-QLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQE 311
Query: 184 ALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNA---ELQEKLRLAESE 240
+ + +K E++ ++ + + + E+++++ E +EK+R E
Sbjct: 312 WEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRLEEM 371
Query: 241 KSEIQLNVKELKRKLERAKFLLPQ 264
E + ++EL+ K+ + + Q
Sbjct: 372 MWEKEEKIRELEEKMHEQEKIREQ 395
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 320 bits (821), Expect = 8e-88
Identities = 172/260 (66%), Positives = 195/260 (75%), Gaps = 42/260 (16%)
Query: 5 PHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSG 64
PHLP HPMMS++TRQ+KLAEAK++ TD+ VGT A+DTKKKKIN+GTNPETTTSG
Sbjct: 31 PHLPTHPMMSKETRQSKLAEAKEQLTDHHPQTNPSVGTAASDTKKKKINNGTNPETTTSG 90
Query: 65 GCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDA 124
GCHSPED E+KASHQHQEALRRE+EAQ TIRILTCQKTEL+ ALYYSQ A
Sbjct: 91 GCHSPED----------EQKASHQHQEALRRELEAQVQTIRILTCQKTELQMALYYSQHA 140
Query: 125 ARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRA 184
++ E GE++DL RLH SW FAGEL++A
Sbjct: 141 VKQLE--------------------------------GEARDLISRLHDSWKFAGELEQA 168
Query: 185 LSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEI 244
LSAV+T+ KKADRYIEELTKERDALSLELYRNTIT+EELK+KNA+LQEKL+L ESEKSEI
Sbjct: 169 LSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVESEKSEI 228
Query: 245 QLNVKELKRKLERAKFLLPQ 264
QLNVKELKRKLERAK LLPQ
Sbjct: 229 QLNVKELKRKLERAKLLLPQ 248
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 159 bits (401), Expect = 4e-39
Identities = 93/197 (47%), Positives = 125/197 (63%), Gaps = 32/197 (16%)
Query: 70 EDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFE 129
+ Q+ QL+EEKK HQ Q ALR +++ TI IL +K EL+TAL ++Q AAR+ E
Sbjct: 189 QQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQKE 248
Query: 130 DGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVS 189
GES+DLA RL +S GEL+RALSAVS
Sbjct: 249 --------------------------------GESEDLASRLQYSRRRVGELERALSAVS 276
Query: 190 TRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVK 249
T+ KKADRY +ELTKERDAL LELY+NT +NE+LK++ +EL+EKLR+ +EK+ +QLN++
Sbjct: 277 TQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLE 336
Query: 250 ELKRKLERAKFLLPQVS 266
EL++KLE + LL Q S
Sbjct: 337 ELQKKLEMTELLLQQFS 353
Score = 115 bits (289), Expect = 4e-26
Identities = 87/253 (34%), Positives = 127/253 (50%), Gaps = 27/253 (10%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP LPP P MSE+TRQ+KLA AKKK +Y+Q N GV TGA KKKKI +G+NPET
Sbjct: 1 MWPQPRLPPRPAMSEETRQSKLAAAKKKLREYQQRNSPGVPTGA--KKKKKIKNGSNPET 58
Query: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
TTSGGCHSPEDT ++ A + L + + ++ T + + +
Sbjct: 59 TTSGGCHSPEDTPKDNAATLQP-----SDDTVLPGGVPSPGASL-------TSMAASQNH 106
Query: 121 SQDAARKFEDGNLGTPSSFNL-ALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAG 179
D D S+ +L LSQ G L C S + + GE + L
Sbjct: 107 DADNVPNLMDETKTFSSTESLRQLSQQLNG--LVCESATCVNGEGPASSANLKDLESRYQ 164
Query: 180 ELQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLR---- 235
+L AL + +K+ + IE+L ++ ++ +L +E +K L+E+L+
Sbjct: 165 QLAVALDSSYVTNKQLNITIEKLKQQNQEITDQLEEE---KKECHQKQGALREQLQVHIQ 221
Query: 236 ---LAESEKSEIQ 245
+ SEK+E+Q
Sbjct: 222 TIGILVSEKAELQ 234
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 147 bits (372), Expect = 9e-36
Identities = 111/325 (34%), Positives = 159/325 (48%), Gaps = 90/325 (27%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP+LPPHPMM E++RQNKLA AKKK +Y+Q G+ GA TKKKK + ++PET
Sbjct: 1 MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGA-KTKKKKTD--SSPET 57
Query: 61 TTSGGCHSPEDTQ-------------------QNRAQLKEEKK-ASHQHQEALRREIEAQ 100
TTSGGCHSP D+Q +N LK++KK HQ +EA + E
Sbjct: 58 TTSGGCHSPGDSQYQELAVALESSSVTISQLNENIESLKQQKKQVEHQLEEAKKTNNEIH 117
Query: 101 D------HTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGC 154
TI ILT +K +L+T LY+++ AAR FE+
Sbjct: 118 KAQMERLETINILTLEKADLKTTLYHTKRAARHFEE------------------------ 153
Query: 155 VSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKAD-----------RYIEELT 203
ESKDLAGRL +S EL+RAL AVST+ ++ D R++++
Sbjct: 154 --------ESKDLAGRLQYSLQRIQELERALCAVSTQQQEEDRSSSCREAVLQRWLQQTI 205
Query: 204 KERDALSLELYRNTITNEE-----------LKKKNAELQEKL-------RLAESEKSEIQ 245
KER L+ + + T + ++ +K + A QE++ R + EK
Sbjct: 206 KERALLNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDI 265
Query: 246 LNVKELKRKLERAKFLLPQVSGCSP 270
++EL+R L K + + +P
Sbjct: 266 HRIQELERSLSELKNQMAEPPSLAP 290
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 180 ELQRALSAVSTRHKKADRYIEELTKERDALSL-ELYRNTITNEELKKKNAELQEKLRLAE 238
E +ALS +S K+ + EE+ +E++A + E R NE L+++ LQE+
Sbjct: 323 ENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLR 382
Query: 239 SEKSEIQLNVKELKRKLER 257
++ ++ + L+++ ER
Sbjct: 383 KQEQRLRKQEERLRKEEER 401
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 144 bits (363), Expect = 1e-34
Identities = 112/325 (34%), Positives = 159/325 (48%), Gaps = 90/325 (27%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP+LPPHPMM E++RQNKLA AKKK +Y+Q G+ GA TKKKK + ++PET
Sbjct: 1 MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGA-KTKKKKTD--SSPET 57
Query: 61 TTSGGCHSPEDTQ-------------------QNRAQLKEEKK-ASHQHQEALRREIE-- 98
TTSGG HSP D+Q +N LK++KK HQ +EA + E
Sbjct: 58 TTSGGGHSPGDSQYQELAVALESSSVTINQLNENIESLKQQKKQVEHQLEEAKKTNNEIH 117
Query: 99 ----AQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGC 154
Q TI ILT +K +L+T LY+++ AAR FE+
Sbjct: 118 KAQMEQLETINILTLEKADLKTTLYHTKRAARHFEE------------------------ 153
Query: 155 VSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKAD-----------RYIEELT 203
ESKDLAGRL +S EL+RALSAVST+ ++ D R +++
Sbjct: 154 --------ESKDLAGRLQYSLQRIQELERALSAVSTQQQEEDRSSSCREAVLQRRLQQTI 205
Query: 204 KERDALSLELYRNTITNEE-----------LKKKNAELQEKL-------RLAESEKSEIQ 245
KER L+ + + T + ++ +K + A QE++ R + EK
Sbjct: 206 KERALLNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDI 265
Query: 246 LNVKELKRKLERAKFLLPQVSGCSP 270
++EL+R L K + + +P
Sbjct: 266 HRIQELERSLSELKNQMAEPPSLAP 290
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 180 ELQRALSAVSTRHKKADRYIEELTKERDALSL-ELYRNTITNEELKKKNAELQEKLRLAE 238
E +ALS +S K+ + EE+ +E++A + E R NE L+++ LQE+
Sbjct: 323 ENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLR 382
Query: 239 SEKSEIQLNVKELKRKLER 257
++ ++ + L+++ ER
Sbjct: 383 KQEQRLRKQEERLRKEEER 401
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 143 bits (360), Expect = 2e-34
Identities = 111/325 (34%), Positives = 158/325 (48%), Gaps = 90/325 (27%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP+LPPHPMM E++RQNKLA AKKK +Y+Q G+ GA TKKKK + ++PET
Sbjct: 1 MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGA-KTKKKKTD--SSPET 57
Query: 61 TTSGGCHSPEDTQ-------------------QNRAQLKEEKK-ASHQHQEALRREIE-- 98
TTSGG HSP D+Q +N LK++KK HQ +EA + E
Sbjct: 58 TTSGGGHSPGDSQYQELAVALESSSVTINQLNENIESLKQQKKQVEHQLEEAKKTNNEIH 117
Query: 99 ----AQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGC 154
Q TI ILT +K +L+T LY+++ AAR FE+
Sbjct: 118 KAQMEQLETINILTLEKADLKTTLYHTKRAARHFEE------------------------ 153
Query: 155 VSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKAD-----------RYIEELT 203
ESKDLAGRL +S EL+RAL AVST+ ++ D R +++
Sbjct: 154 --------ESKDLAGRLQYSLQHIQELERALCAVSTQQQEEDRSSSCREAVLQRRLQQTI 205
Query: 204 KERDALSLELYRNTITNEE-----------LKKKNAELQEKL-------RLAESEKSEIQ 245
KER L+ + + T + ++ +K + A QE++ R + EK
Sbjct: 206 KERALLNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDI 265
Query: 246 LNVKELKRKLERAKFLLPQVSGCSP 270
++EL+R L K + + +P
Sbjct: 266 HRIQELERSLSELKNQMAEPPSLAP 290
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 180 ELQRALSAVSTRHKKADRYIEELTKERDALSL-ELYRNTITNEELKKKNAELQEKLRLAE 238
E +ALS +S K+ + EE+ +E++A + E R NE L+++ LQE+
Sbjct: 323 ENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLR 382
Query: 239 SEKSEIQLNVKELKRKLER 257
++ ++ + L+++ ER
Sbjct: 383 KQEQRLRKQEERLRKEEER 401
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 141 bits (355), Expect = 8e-34
Identities = 104/282 (36%), Positives = 141/282 (50%), Gaps = 75/282 (26%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP+LPPHPMM E++RQNKLA AKKK +Y+Q G+ GA TKKKK + ++PET
Sbjct: 1 MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGA-KTKKKKTD--SSPET 57
Query: 61 TTSGGCHSPEDTQ-------------------QNRAQLKEEKK-ASHQHQEALRREIEAQ 100
TTSGG HSP D+Q +N LK++KK HQ +EA + E
Sbjct: 58 TTSGGGHSPGDSQYQELAVALESSSVTISQLNENIESLKQQKKQVEHQLEEAKKTNNEIH 117
Query: 101 D------HTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGC 154
TI ILT +K +L+T LY+++ AAR FE+
Sbjct: 118 KAQMERLETINILTLEKADLKTTLYHTKRAARHFEE------------------------ 153
Query: 155 VSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKAD-----------RYIEELT 203
ESKDLAGRL +S EL+RAL AVST+ ++ D R +++
Sbjct: 154 --------ESKDLAGRLQYSLQRIQELERALCAVSTQQQEEDRSSSCREAVLHRRLQQTI 205
Query: 204 KERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQ 245
KER L+ + T E LK+ E E + + E++ Q
Sbjct: 206 KERALLNAHV---TQVTESLKQVQLERDEYAKHIKGERARWQ 244
Score = 29.3 bits (64), Expect = 4.6
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 180 ELQRALSAVSTRHKKADRYIEELTKERDALSL-ELYRNTITNEELKKKNAELQEKLRLAE 238
E +ALS +S K+ + EE+ +E++ + E R NE L+++ LQE+
Sbjct: 323 ENNQALSLLSKEQKQRLQEQEEMLREQEVQRVREQERLCEQNERLREQQKTLQEQGERLR 382
Query: 239 SEKSEIQLNVKELKRKLER 257
++ ++ + L+++ ER
Sbjct: 383 KQEQRLRKQEERLRKEEER 401
>gi|239745087 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 547
Score = 125 bits (315), Expect = 4e-29
Identities = 102/300 (34%), Positives = 141/300 (47%), Gaps = 92/300 (30%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQ LPPHP M+E+TRQ+KLA AK+K +Y Q N GV GA K+ + +G+ ET
Sbjct: 1 MWPQARLPPHPAMAEETRQSKLAAAKRKLKEYWQRNSPGVPAGA---KRNRKTNGSIHET 57
Query: 61 TTSGGCHSPEDT-----------------------------------------------Q 73
TSGGCHSP D+ Q
Sbjct: 58 ATSGGCHSPGDSATGIHGESPTSSATLKDLESPCQELAVVPDSRSVKVSQLKNTIKSLKQ 117
Query: 74 QNRA---QLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFED 130
Q + QL+EEKKA+++ Q+A RE+E Q I+ L QK +L T LY+++ + R FE+
Sbjct: 118 QKKQVVHQLEEEKKANNEKQKA-ERELEVQ---IQRLNIQKGKLNTDLYHTKRSLRYFEE 173
Query: 131 GNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAV-S 189
ESKDLA RL HS GEL+RALSAV +
Sbjct: 174 --------------------------------ESKDLAVRLQHSLQRKGELERALSAVTA 201
Query: 190 TRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVK 249
T+ KKA+R +K R LE ++ LK + +L+E L+ + E+ E ++K
Sbjct: 202 TQKKKAERQFSSRSKARTEWKLE--QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 259
>gi|239745085 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 3 [Homo sapiens]
Length = 601
Score = 125 bits (315), Expect = 4e-29
Identities = 100/292 (34%), Positives = 140/292 (47%), Gaps = 85/292 (29%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQ LPPHP M+E+TRQ+KLA AK+K +Y Q N GV GA K+ + +G+ ET
Sbjct: 1 MWPQARLPPHPAMAEETRQSKLAAAKRKLKEYWQRNSPGVPAGA---KRNRKTNGSIHET 57
Query: 61 TTSGGCHSPEDTQQNRA------------------------------------------Q 78
TSGGCHSP D+ + Q
Sbjct: 58 ATSGGCHSPGDSSSTSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSLKQQKKQVVHQ 117
Query: 79 LKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSS 138
L+EEKKA+++ Q+A RE+E Q I+ L QK +L T LY+++ + R FE+
Sbjct: 118 LEEEKKANNEKQKA-ERELEVQ---IQRLNIQKGKLNTDLYHTKRSLRYFEE-------- 165
Query: 139 FNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAV-STRHKKADR 197
ESKDLA RL HS GEL+RALSAV +T+ KKA+R
Sbjct: 166 ------------------------ESKDLAVRLQHSLQRKGELERALSAVTATQKKKAER 201
Query: 198 YIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVK 249
+ +K R LE ++ LK + +L+E L+ + E+ E ++K
Sbjct: 202 F-SSRSKARTEWKLE--QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 250
Score = 31.2 bits (69), Expect = 1.2
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 153 GCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALSLE 212
GC S PG+S + LH EL + S + + I+ L +++ + +
Sbjct: 62 GCHS----PGDSSSTSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSLKQQKKQVVHQ 117
Query: 213 LYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKL 255
L N E +K EL+ +++ +K ++ ++ KR L
Sbjct: 118 LEEEKKANNEKQKAERELEVQIQRLNIQKGKLNTDLYHTKRSL 160
>gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 629
Score = 125 bits (315), Expect = 4e-29
Identities = 100/292 (34%), Positives = 140/292 (47%), Gaps = 85/292 (29%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQ LPPHP M+E+TRQ+KLA AK+K +Y Q N GV GA K+ + +G+ ET
Sbjct: 1 MWPQARLPPHPAMAEETRQSKLAAAKRKLKEYWQRNSPGVPAGA---KRNRKTNGSIHET 57
Query: 61 TTSGGCHSPEDTQQNRA------------------------------------------Q 78
TSGGCHSP D+ + Q
Sbjct: 58 ATSGGCHSPGDSSSTSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSLKQQKKQVVHQ 117
Query: 79 LKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSS 138
L+EEKKA+++ Q+A RE+E Q I+ L QK +L T LY+++ + R FE+
Sbjct: 118 LEEEKKANNEKQKA-ERELEVQ---IQRLNIQKGKLNTDLYHTKRSLRYFEE-------- 165
Query: 139 FNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAV-STRHKKADR 197
ESKDLA RL HS GEL+RALSAV +T+ KKA+R
Sbjct: 166 ------------------------ESKDLAVRLQHSLQRKGELERALSAVTATQKKKAER 201
Query: 198 YIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVK 249
+ +K R LE ++ LK + +L+E L+ + E+ E ++K
Sbjct: 202 F-SSRSKARTEWKLE--QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 250
Score = 31.2 bits (69), Expect = 1.2
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 153 GCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALSLE 212
GC S PG+S + LH EL + S + + I+ L +++ + +
Sbjct: 62 GCHS----PGDSSSTSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSLKQQKKQVVHQ 117
Query: 213 LYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKL 255
L N E +K EL+ +++ +K ++ ++ KR L
Sbjct: 118 LEEEKKANNEKQKAERELEVQIQRLNIQKGKLNTDLYHTKRSL 160
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 117 bits (293), Expect = 1e-26
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 198 YIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLER 257
YIE+LTKERDALSLELYRNTIT+EELK+KNAELQEKLRL ESEKSEIQLNVK+LKRKLER
Sbjct: 191 YIEKLTKERDALSLELYRNTITDEELKEKNAELQEKLRLVESEKSEIQLNVKDLKRKLER 250
Query: 258 AKFLLPQ 264
A+ LLPQ
Sbjct: 251 AQLLLPQ 257
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 114 bits (286), Expect = 8e-26
Identities = 59/67 (88%), Positives = 64/67 (95%)
Query: 198 YIEELTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLER 257
YIE+LTKERDA SLELYRNTIT+EELK+KNAELQEKLRL ESEKSEIQLNVK+LKRKLER
Sbjct: 191 YIEKLTKERDAPSLELYRNTITDEELKEKNAELQEKLRLVESEKSEIQLNVKDLKRKLER 250
Query: 258 AKFLLPQ 264
A+ LLPQ
Sbjct: 251 AQLLLPQ 257
>gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo
sapiens]
Length = 1281
Score = 110 bits (274), Expect = 2e-24
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 8/154 (5%)
Query: 145 QAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTK 204
QAFRGSPLG +STSLI E++DLA L +SW GEL++ +KADRY +LT+
Sbjct: 865 QAFRGSPLGPISTSLILEEAEDLASHLLYSWQHVGELEQ-------EQRKADRYNNQLTR 917
Query: 205 ERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQ 264
+ DAL LELY N+ +N+ELK++N+ L E+L++ +K+ +Q +++ELK+KLE + L Q
Sbjct: 918 DSDALRLELYNNSNSNKELKQENSALAEQLQVVLIDKAGMQCDLEELKKKLELTELTLQQ 977
Query: 265 VSG-CSPRGCGRPIQLGPWSRDHARYGEGPAKSW 297
+S C + +Q R G W
Sbjct: 978 LSSWCEAPDANQQLQQPTDERAQLEAHLGQVMEW 1011
Score = 68.9 bits (167), Expect = 5e-12
Identities = 64/191 (33%), Positives = 78/191 (40%), Gaps = 64/191 (33%)
Query: 82 EKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNL 141
EK+ S Q+Q L+R++E Q L +K +L T LY+ Q AAR FE GNLGT SSFNL
Sbjct: 310 EKQESQQNQGTLKRQLEVQIQRTNKLMSEKGKLNTELYHMQRAARHFEGGNLGTLSSFNL 369
Query: 142 ALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEE 201
SP + IP K QR A EE
Sbjct: 370 E-------SPWIWPAACSIPSSPK----------------QRGPEA------------EE 394
Query: 202 LTKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFL 261
L R+A S +LN+K+L+RKLERAK L
Sbjct: 395 LRTRREASS----------------------------PSDRRFRLNLKQLQRKLERAKIL 426
Query: 262 LPQVSGCSPRG 272
L GCSPRG
Sbjct: 427 L-LARGCSPRG 436
Score = 52.0 bits (123), Expect = 7e-07
Identities = 46/155 (29%), Positives = 63/155 (40%), Gaps = 41/155 (26%)
Query: 43 GATDTKKKKINHGTNPETTTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDH 102
G K K + SGGC P +N A L Q L ++ +
Sbjct: 436 GGKARKPAKPGRALKRQLEVSGGCEVPSCPLENVAFLL--------FQHLLGFSPKSSNQ 487
Query: 103 TIRILTCQKTELETALYYSQDAA-RKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLIP 161
TI IL +K E++TALY+++ AA R+FE+
Sbjct: 488 TIGILMFEKAEMKTALYHTERAAARQFEE------------------------------- 516
Query: 162 GESKDLAGRLHHSWHFAGELQRALSAVSTRHKKAD 196
ES DLA L +S F GEL+R L A+ST+ K D
Sbjct: 517 -ESTDLASCLQYSQQFTGELERTLFALSTQQKNMD 550
>gi|239745083 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 4 [Homo sapiens]
Length = 590
Score = 99.0 bits (245), Expect = 5e-21
Identities = 92/280 (32%), Positives = 131/280 (46%), Gaps = 85/280 (30%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCHS---- 68
M+E+TRQ+KLA AK+K +Y Q N GV GA K+ + +G+ ET TSGGCHS
Sbjct: 1 MAEETRQSKLAAAKRKLKEYWQRNSPGVPAGA---KRNRKTNGSIHETATSGGCHSSPHS 57
Query: 69 ---------PEDTQQNRA-----------------------------QLKEEKKASHQHQ 90
P+ Q A QL+EEKKA+++ Q
Sbjct: 58 SSTSSSLHAPQSPCQELAVVPDSRSVKVSQLKNTIKSLKQQKKQVVHQLEEEKKANNEKQ 117
Query: 91 EALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGS 150
+A RE+E Q I+ L QK +L T LY+++ + R FE+
Sbjct: 118 KA-ERELEVQ---IQRLNIQKGKLNTDLYHTKRSLRYFEE-------------------- 153
Query: 151 PLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAV-STRHKKADRYIEELTKERDAL 209
ESKDLA RL HS GEL+RALSAV +T+ KKA+R+ +K R
Sbjct: 154 ------------ESKDLAVRLQHSLQRKGELERALSAVTATQKKKAERF-SSRSKARTEW 200
Query: 210 SLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVK 249
LE ++ LK + +L+E L+ + E+ E ++K
Sbjct: 201 KLE--QSMREQALLKAQLTQLKESLKEVQLERDEYAEHLK 238
>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 595
Score = 97.1 bits (240), Expect = 2e-20
Identities = 90/296 (30%), Positives = 128/296 (43%), Gaps = 84/296 (28%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCH----- 67
M+E+T+ NKLA AKKK +Y Q N V G +K +G+ PET TSGGCH
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRK---TNGSIPETATSGGCHLSPHS 57
Query: 68 --------SPEDTQQNRA-----------------------------QLKEEKKASHQHQ 90
+P+ Q RA QL+EEKKA+++ Q
Sbjct: 58 CSTSSSLHAPQSPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNERQ 117
Query: 91 EALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGS 150
+A RE+E Q I+ L QK EL T LY+ + + R FE+
Sbjct: 118 KA-ERELEVQ---IQTLIIQKEELNTDLYHMERSLRYFEE-------------------- 153
Query: 151 PLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALS 210
ESKDLA RL HS GEL+RALSAV KK + +K
Sbjct: 154 ------------ESKDLAVRLQHSLQCKGELERALSAVIATEKKKANQLSSCSKAHTEWE 201
Query: 211 LELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVK-ELKRKLERAKFLLPQV 265
LE ++ LK + +L+E + + E+ E +++ E R +R +L ++
Sbjct: 202 LE--QSLQDQALLKAQLTQLKESFQQLQLERDECAEHIEGERARWHQRMSKMLQEI 255
>gi|169208458 PREDICTED: similar to golgi autoantigen, golgin
subfamily a-like [Homo sapiens]
Length = 432
Score = 94.0 bits (232), Expect = 2e-19
Identities = 85/274 (31%), Positives = 124/274 (45%), Gaps = 18/274 (6%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP LPPHP MSEKT+Q KLA AKKK Y Q G+ GA +KKK+N G++P+T
Sbjct: 1 MWPQPRLPPHPAMSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGA--NRKKKVN-GSSPDT 57
Query: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
TSGG HSP D+ + Q E+ +E+ + + Q TE +L
Sbjct: 58 ATSGGYHSPGDSATGIYGEGRASSTTLQDLESQYQELAVALDSSSAIISQLTENINSLVR 117
Query: 121 SQDAARKFE---DGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHF 177
+ +K E LG S F L A +P S + + +D L
Sbjct: 118 TSKEEKKHEIHLVQKLGR-SLFKLKNQTAEPLAPQPPAGPSKVE-QLQDETNHLRKELES 175
Query: 178 AG-------ELQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAEL 230
G E + LS ++ R ++ R EE +E++ E EE ++ E
Sbjct: 176 VGRQLQAEVENNQMLSLLNRRQEERLREQEERLREQEERLCEQEERLCEQEERLREQEER 235
Query: 231 ---QEKLRLAESEKSEIQLNVKELKRKLERAKFL 261
QEKL E E++ +K+ +R+ E+ + L
Sbjct: 236 LCEQEKLPGQERLLEEVEKLLKQERRQEEQERLL 269
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 94.0 bits (232), Expect = 2e-19
Identities = 85/273 (31%), Positives = 116/273 (42%), Gaps = 83/273 (30%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCH----- 67
M+E+T+ NKLA AKKK +Y Q N V G +K +G+ PET TSGGCH
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRK---TNGSIPETATSGGCHLSPHS 57
Query: 68 --------SPEDTQQNRA-----------------------------QLKEEKKASHQHQ 90
+P+ Q RA QL+EEKKA+++ Q
Sbjct: 58 CSTSSSLHAPQSPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNERQ 117
Query: 91 EALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGS 150
+A RE+E Q I+ L QK EL T LY+ + + R FE+
Sbjct: 118 KA-ERELEVQ---IQTLIIQKEELNTDLYHMERSLRYFEE-------------------- 153
Query: 151 PLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALS 210
ESKDLA RL HS GEL+ ALSAV KK + +K
Sbjct: 154 ------------ESKDLAVRLQHSLQCKGELESALSAVIATEKKKANQLSSCSKAHTEWE 201
Query: 211 LELYRNTITNEELKKKNAELQEKLRLAESEKSE 243
LE ++ LK + +L+E + + E+ E
Sbjct: 202 LE--QSLQDQALLKAQLTQLKESFQQLQLERDE 232
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 94.0 bits (232), Expect = 2e-19
Identities = 85/273 (31%), Positives = 116/273 (42%), Gaps = 83/273 (30%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCH----- 67
M+E+T+ NKLA AKKK +Y Q N V G +K +G+ PET TSGGCH
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRK---TNGSIPETATSGGCHLSPHS 57
Query: 68 --------SPEDTQQNRA-----------------------------QLKEEKKASHQHQ 90
+P+ Q RA QL+EEKKA+++ Q
Sbjct: 58 CSTSSSLHAPQSPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNERQ 117
Query: 91 EALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGS 150
+A RE+E Q I+ L QK EL T LY+ + + R FE+
Sbjct: 118 KA-ERELEVQ---IQTLIIQKEELNTDLYHMERSLRYFEE-------------------- 153
Query: 151 PLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALS 210
ESKDLA RL HS GEL+ ALSAV KK + +K
Sbjct: 154 ------------ESKDLAVRLQHSLQCKGELESALSAVIATEKKKANQLSSCSKAHTEWE 201
Query: 211 LELYRNTITNEELKKKNAELQEKLRLAESEKSE 243
LE ++ LK + +L+E + + E+ E
Sbjct: 202 LE--QSLQDQALLKAQLTQLKESFQQLQLERDE 232
>gi|154937324 hypothetical protein LOC440295 [Homo sapiens]
Length = 432
Score = 94.0 bits (232), Expect = 2e-19
Identities = 85/274 (31%), Positives = 124/274 (45%), Gaps = 18/274 (6%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP LPPHP MSEKT+Q KLA AKKK Y Q G+ GA +KKK+N G++P+T
Sbjct: 1 MWPQPRLPPHPAMSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGA--NRKKKVN-GSSPDT 57
Query: 61 TTSGGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELETALYY 120
TSGG HSP D+ + Q E+ +E+ + + Q TE +L
Sbjct: 58 ATSGGYHSPGDSATGIYGEGRASSTTLQDLESQYQELAVALDSSSAIISQLTENINSLVR 117
Query: 121 SQDAARKFE---DGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHF 177
+ +K E LG S F L A +P S + + +D L
Sbjct: 118 TSKEEKKHEIHLVQKLGR-SLFKLKNQTAEPLAPQPPAGPSKVE-QLQDETNHLRKELES 175
Query: 178 AG-------ELQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKKKNAEL 230
G E + LS ++ R ++ R EE +E++ E EE ++ E
Sbjct: 176 VGRQLQAEVENNQMLSLLNRRQEERLREQEERLREQEERLCEQEERLCEQEERLREQEER 235
Query: 231 ---QEKLRLAESEKSEIQLNVKELKRKLERAKFL 261
QEKL E E++ +K+ +R+ E+ + L
Sbjct: 236 LCEQEKLPGQERLLEEVEKLLKQERRQEEQERLL 269
>gi|169208016 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 1 [Homo sapiens]
Length = 594
Score = 93.6 bits (231), Expect = 2e-19
Identities = 85/273 (31%), Positives = 116/273 (42%), Gaps = 83/273 (30%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCH----- 67
M+E+T+ NKLA AKKK +Y Q N V G +K +G+ PET TSGGCH
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRK---TNGSIPETATSGGCHLSPHS 57
Query: 68 --------SPEDTQQNRA-----------------------------QLKEEKKASHQHQ 90
+P+ Q RA QL+EEKKA+++ Q
Sbjct: 58 CSTSSSLHAPQSPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNERQ 117
Query: 91 EALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGS 150
+A R +E Q I+ L QK EL T LY+ + + R FE+
Sbjct: 118 KA-ERVLEVQ---IQTLIIQKEELNTDLYHMERSLRYFEE-------------------- 153
Query: 151 PLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEELTKERDALS 210
ESKDLA RL HS GEL+RALSAV KK + +K
Sbjct: 154 ------------ESKDLAVRLQHSLQCKGELERALSAVIATEKKKANQLSSCSKAHTEWE 201
Query: 211 LELYRNTITNEELKKKNAELQEKLRLAESEKSE 243
LE ++ LK + +L+E + + E+ E
Sbjct: 202 LE--QSLQDQALLKAQLTQLKESFQQLQLERDE 232
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 92.4 bits (228), Expect = 4e-19
Identities = 90/304 (29%), Positives = 127/304 (41%), Gaps = 92/304 (30%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCHSPEDT 72
M+E+T+ NKLA AKKK +Y Q N V G +K +G+ PET TSGGC P D+
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNRPRVPAGVNRNRK---TNGSIPETATSGGCQPPGDS 57
Query: 73 Q---------------------QNRA-----------------------------QLKEE 82
Q RA QL+EE
Sbjct: 58 ATGFHREGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEE 117
Query: 83 KKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLA 142
KKA+++ Q+A RE+E Q I+ L QK EL T LY+ + + R FE+
Sbjct: 118 KKANNERQKA-ERELEVQ---IQTLIIQKEELNTDLYHMERSLRYFEE------------ 161
Query: 143 LSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAVSTRHKKADRYIEEL 202
ESKDLA RL HS GEL+RALSAV KK +
Sbjct: 162 --------------------ESKDLAVRLQHSLQCKGELERALSAVIATEKKKANQLSSC 201
Query: 203 TKERDALSLELYRNTITNEELKKKNAELQEKLRLAESEKSEIQLNVK-ELKRKLERAKFL 261
+K LE ++ LK + +L+E + + E+ E +++ E R +R +
Sbjct: 202 SKAHTEWELE--QSLQDQALLKAQLTQLKESFQQLQLERDECAEHIEGERARWHQRMSKM 259
Query: 262 LPQV 265
L ++
Sbjct: 260 LQEI 263
>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
sapiens]
Length = 603
Score = 90.5 bits (223), Expect = 2e-18
Identities = 96/320 (30%), Positives = 139/320 (43%), Gaps = 113/320 (35%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCHSPE-- 70
M+E+T Q+KLA AKKKF +Y Q N GV A K+ +G++PET SGGCHS E
Sbjct: 1 MAEETGQSKLAAAKKKFKEYWQRNRPGVPAAA---KRNTKANGSSPETAASGGCHSSEAS 57
Query: 71 --------------------------------DT--------QQNRAQLKEEKKASHQHQ 90
DT +Q QL+EEKKA+++ Q
Sbjct: 58 SSASSSLHARQSPCQEQAAVLNSRSIKISRLNDTIKSLKQQKKQVEHQLEEEKKANNEKQ 117
Query: 91 EALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGS 150
+A RE+E Q I+ L +K +L T LY+ + + R FE+
Sbjct: 118 KA-ERELEGQ---IQRLNTEKKKLNTDLYHMKHSLRYFEE-------------------- 153
Query: 151 PLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAV-STRHKKAD-----------RY 198
ESKDLAGRL S GEL+ +L AV +T+ KK D R
Sbjct: 154 ------------ESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQ 201
Query: 199 IEELTKERDAL------------SLELYRNTITNEELKKKNAELQEKLR-------LAES 239
+E+ +E+ L ++L R+ E++K + A+ Q+++R +
Sbjct: 202 LEQSIREQILLKGHVTQLKESLKEVQLERDQYA-EQIKGERAQWQQRMRKMSQEVCTLKE 260
Query: 240 EKSEIQLNVKELKRKLERAK 259
EK V+EL+R L R K
Sbjct: 261 EKKHDTHRVEELERSLSRLK 280
>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
sapiens]
Length = 603
Score = 90.5 bits (223), Expect = 2e-18
Identities = 96/320 (30%), Positives = 139/320 (43%), Gaps = 113/320 (35%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCHSPE-- 70
M+E+T Q+KLA AKKKF +Y Q N GV A K+ +G++PET SGGCHS E
Sbjct: 1 MAEETGQSKLAAAKKKFKEYWQRNRPGVPAAA---KRNTKANGSSPETAASGGCHSSEAS 57
Query: 71 --------------------------------DT--------QQNRAQLKEEKKASHQHQ 90
DT +Q QL+EEKKA+++ Q
Sbjct: 58 SSASSSLHARQSPCQEQAAVLNSRSIKISRLNDTIKSLKQQKKQVEHQLEEEKKANNEKQ 117
Query: 91 EALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGS 150
+A RE+E Q I+ L +K +L T LY+ + + R FE+
Sbjct: 118 KA-ERELEGQ---IQRLNTEKKKLNTDLYHMKHSLRYFEE-------------------- 153
Query: 151 PLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAV-STRHKKAD-----------RY 198
ESKDLAGRL S GEL+ +L AV +T+ KK D R
Sbjct: 154 ------------ESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQ 201
Query: 199 IEELTKERDAL------------SLELYRNTITNEELKKKNAELQEKLR-------LAES 239
+E+ +E+ L ++L R+ E++K + A+ Q+++R +
Sbjct: 202 LEQSIREQILLKGHVTQLKESLKEVQLERDQYA-EQIKGERAQWQQRMRKMSQEVCTLKE 260
Query: 240 EKSEIQLNVKELKRKLERAK 259
EK V+EL+R L R K
Sbjct: 261 EKKHDTHRVEELERSLSRLK 280
>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
Length = 523
Score = 89.7 bits (221), Expect = 3e-18
Identities = 88/270 (32%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 1 MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPET 60
MWPQP LPPHP MSEKT+Q KLA AKKK Y Q G+ GA +KKKIN G++P+T
Sbjct: 1 MWPQPRLPPHPAMSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGA--NRKKKIN-GSSPDT 57
Query: 61 TTSGGCHSPEDTQ-----QNRAQLKEEKKASHQHQEALRREIEAQDHTIRILTCQKTELE 115
TSGG HSP D+ + RA + Q+QE A D + I++ Q TE
Sbjct: 58 ATSGGYHSPGDSATGIYGEGRASSTTLEDLESQYQEL----AVALDSSSAIIS-QLTENI 112
Query: 116 TALYYSQDAARKFE---DGNLGTPSSFNLALSQAFRGSPLGCVSTSLIPGESKDLAGRLH 172
+L + +K E LG S F L A +P S + + +D L
Sbjct: 113 NSLVRTSKEEKKHEIHLVQKLGR-SLFKLKNQTAEPLAPEPPAGPSKVE-QLQDETNHLR 170
Query: 173 HSWHFAG-------ELQRALSAVSTRHKKADRYIEELTKERDALSLELYRNTITNEELKK 225
G E + LS ++ R ++ R EE +E++ E EE
Sbjct: 171 KELESVGRQLQAEVENNQMLSLLNRRQEERLREQEERLREQEERLREQEERLCEQEE--- 227
Query: 226 KNAELQEKLRLAESEKSEIQLNVKELKRKL 255
+ E +E+LR E E + ++E + +L
Sbjct: 228 RLREQEERLREQEERLCEQEERLREHEERL 257
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 89.7 bits (221), Expect = 3e-18
Identities = 91/308 (29%), Positives = 131/308 (42%), Gaps = 110/308 (35%)
Query: 13 MSEKTRQNKLAEAKKKFTDYRQWNIAGVGTGATDTKKKKINHGTNPETTTSGGCHSPEDT 72
M+E+T+ NKLA AKKK +Y Q N V GA +K +G+ PE TSGGC P D+
Sbjct: 1 MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRK---TNGSIPEKATSGGCQPPRDS 57
Query: 73 Q---------------------QNRA-----------------------------QLKEE 82
Q RA QL+EE
Sbjct: 58 ATGFHREGPTSSATLKDLESPCQERAVVLDSRSVEISQLKNTIKSLKQQKKQVEHQLEEE 117
Query: 83 KKASHQHQEALRREIEAQDHTIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLA 142
KKA+++ Q+A +R +E Q T+ I QK EL T LY+ + + R FE+
Sbjct: 118 KKANNKKQKA-KRVLEVQIQTLNI---QKEELNTDLYHMKRSLRYFEE------------ 161
Query: 143 LSQAFRGSPLGCVSTSLIPGESKDLAGRLHHSWHFAGELQRALSAV-STRHKKADRY--- 198
+SKDLA RL HS GEL+ LS V +T+ KKA+++
Sbjct: 162 --------------------KSKDLAVRLQHSLQRKGELESVLSNVMATQKKKANQFKES 201
Query: 199 IEELTKERDALSLELYRNTITNEELKKKNAELQEKLR-------LAESEKSEIQLNVKEL 251
+++ ERD S E LK + A Q+++R + EK + V++L
Sbjct: 202 FQQVQLERDEYS----------EHLKGERARWQQRMRKMSQEICTLKKEKQQDMRRVEKL 251
Query: 252 KRKLERAK 259
+R L + K
Sbjct: 252 ERSLSKLK 259
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,651,176
Number of Sequences: 37866
Number of extensions: 597249
Number of successful extensions: 4623
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 3154
Number of HSP's gapped (non-prelim): 1447
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.