Guide to the Human Genome
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Name: LOC283685 Sequence: fasta or formatted (307aa) NCBI GI: 239750781
Description:

PREDICTED: golgi autoantigen, golgin subfamily a-like

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [828aa] PREDICTED: golgi autoantigen, golgin subfamily a-like
alt prot [899aa] PREDICTED: golgi autoantigen, golgin subfamily a-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         24           2
 C cysteine            1.6          5           1
 D aspartate           3.3         10           1
 E glutamate           9.1         28           2
 F phenylalanine       2.0          6           1
 G glycine             6.2         19           2
 H histidine           3.9         12           2
 I isoleucine          3.6         11           1
 K lysine              9.4         29           4
 L leucine            10.4         32           2
 M methionine          1.0          3           2
 N asparagine          3.6         11           1
 P proline             5.5         17           2
 Q glutamine           5.5         17           2
 R arginine            6.8         21           2
 S serine              7.2         22           2
 T threonine           6.5         20           3
 V valine              2.6          8           1
 W tryptophan          2.0          6           1
 Y tyrosine            2.0          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: golgi autoantigen, golgin subfamily a-li... 
LOC283685             0.838   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.664   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC440243             0.497   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC727832             0.493   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.493   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.488   PREDICTED: hypothetical protein LOC645202 
GOLGA2                0.222   Golgi autoantigen, golgin subfamily a, 2 
GOLGA6                0.202   golgi autoantigen, golgin subfamily a, 6 
GOLGA6C               0.197   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6D               0.195   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6B               0.192   golgi autoantigen, golgin subfamily a, 6B 
LOC653061             0.166   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.166   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.166   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC100132816          0.152   PREDICTED: similar to Putative golgin subfamily A m...
LOC400352             0.147   PREDICTED: similar to Putative golgin subfamily A m...
LOC100289289          0.141   PREDICTED: hypothetical protein XP_002343409 
LOC653061             0.123   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.119   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728636             0.114   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC728080             0.114   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.114   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC440295             0.114   hypothetical protein LOC440295 
LOC643699             0.114   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC727909             0.111   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8B               0.109   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.109   golgi autoantigen, golgin subfamily a, 8A 
LOC100133220          0.108   PREDICTED: hypothetical protein 
LOC653073             0.108   PREDICTED: Golgin subfamily A member 8-like protein...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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