Search of human proteins with 239750488

Search of human proteins with 239750488

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750488 PREDICTED: similar to CNOT4 protein, partial [Homo
sapiens]
         (318 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750488 PREDICTED: similar to CNOT4 protein, partial [Homo ...   649   0.0  
gi|239744787 PREDICTED: similar to CNOT4 protein, partial [Homo ...   642   0.0  
gi|239755967 PREDICTED: similar to CNOT4 protein, partial [Homo ...   637   0.0  
gi|56550057 CCR4-NOT transcription complex, subunit 4 isoform a ...   183   2e-46
gi|56550059 CCR4-NOT transcription complex, subunit 4 isoform b ...   183   2e-46
gi|169213703 PREDICTED: hypothetical protein [Homo sapiens]            33   0.44 
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa...    33   0.44 
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s...    33   0.44 
gi|122937193 DNB5 [Homo sapiens]                                       33   0.44 
gi|134304840 KIAA0319 [Homo sapiens]                                   32   0.57 
gi|197276594 RNA binding motif protein 20 [Homo sapiens]               32   0.57 
gi|195947361 histidine acid phosphatase domain containing 2A iso...    32   0.57 
gi|195947359 histidine acid phosphatase domain containing 2A iso...    32   0.57 
gi|66932992 histidine acid phosphatase domain containing 2A isof...    32   0.57 
gi|221219026 pleckstrin homology-like domain, family B, member 1...    32   0.75 
gi|221219024 pleckstrin homology-like domain, family B, member 1...    32   0.75 
gi|38424073 pleckstrin homology-like domain, family B, member 1 ...    32   0.75 
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    32   0.75 
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s...    32   0.97 
gi|22027471 neuronal PAS domain protein 2 [Homo sapiens]               31   1.3  
gi|56117846 synovial sarcoma translocation, chromosome 18 isofor...    31   1.3  
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor...    31   1.3  
gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens]             31   1.3  
gi|45827731 scribble isoform a [Homo sapiens]                          31   1.3  
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho...    31   1.7  
gi|38348310 hypothetical protein LOC341032 [Homo sapiens]              31   1.7  
gi|124378039 SEC16 homolog A [Homo sapiens]                            30   2.2  
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro...    30   2.2  
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro...    30   2.2  
gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens]            30   2.2  

>gi|239750488 PREDICTED: similar to CNOT4 protein, partial [Homo
           sapiens]
          Length = 318

 Score =  649 bits (1674), Expect = 0.0
 Identities = 318/318 (100%), Positives = 318/318 (100%)

Query: 1   SRWHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL 60
           SRWHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL
Sbjct: 1   SRWHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL 60

Query: 61  SLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE 120
           SLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE
Sbjct: 61  SLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE 120

Query: 121 QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRS 180
           QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRS
Sbjct: 121 QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRS 180

Query: 181 SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF 240
           SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF
Sbjct: 181 SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF 240

Query: 241 DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPRF 300
           DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPRF
Sbjct: 241 DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPRF 300

Query: 301 QQHLTVYESFFFSRLGNS 318
           QQHLTVYESFFFSRLGNS
Sbjct: 301 QQHLTVYESFFFSRLGNS 318


>gi|239744787 PREDICTED: similar to CNOT4 protein, partial [Homo
           sapiens]
          Length = 318

 Score =  642 bits (1655), Expect = 0.0
 Identities = 315/318 (99%), Positives = 316/318 (99%)

Query: 1   SRWHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL 60
           SRWHQIHTEETVLCPVNRKPCPEG SVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL
Sbjct: 1   SRWHQIHTEETVLCPVNRKPCPEGSSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL 60

Query: 61  SLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE 120
           SLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE
Sbjct: 61  SLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE 120

Query: 121 QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRS 180
           QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRS
Sbjct: 121 QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRS 180

Query: 181 SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF 240
           SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF
Sbjct: 181 SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF 240

Query: 241 DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPRF 300
           DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLP RPP+F
Sbjct: 241 DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPPRPPQF 300

Query: 301 QQHLTVYESFFFSRLGNS 318
           QQHLTVYESFFFSRLGNS
Sbjct: 301 QQHLTVYESFFFSRLGNS 318


>gi|239755967 PREDICTED: similar to CNOT4 protein, partial [Homo
           sapiens]
          Length = 318

 Score =  637 bits (1644), Expect = 0.0
 Identities = 314/318 (98%), Positives = 314/318 (98%)

Query: 1   SRWHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL 60
           SRWHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL
Sbjct: 1   SRWHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKSCL 60

Query: 61  SLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE 120
           SLVCVAGLSQ LADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE
Sbjct: 61  SLVCVAGLSQSLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSLAAEHQEYE 120

Query: 121 QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRS 180
           QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSP TGLPKSSPVIPVRS
Sbjct: 121 QQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPSTGLPKSSPVIPVRS 180

Query: 181 SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF 240
           SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF
Sbjct: 181 SGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVF 240

Query: 241 DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPRF 300
           DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRPP F
Sbjct: 241 DAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPXF 300

Query: 301 QQHLTVYESFFFSRLGNS 318
           QQHLTVYESFFFSRL NS
Sbjct: 301 QQHLTVYESFFFSRLSNS 318


>gi|56550057 CCR4-NOT transcription complex, subunit 4 isoform a
           [Homo sapiens]
          Length = 639

 Score =  183 bits (465), Expect = 2e-46
 Identities = 124/266 (46%), Positives = 141/266 (53%), Gaps = 59/266 (22%)

Query: 106 FTKEKSLAAEHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSP---------- 155
           FTKE+  A +HQEYEQ+LLQE Y LNPN+L LS G  D+NK ++ PLQSP          
Sbjct: 223 FTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSI 282

Query: 156 -------TTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDN----- 203
                    SN D PSPP GL KS+PVIP+ SS HS + P EGA  ESQ LF DN     
Sbjct: 283 GNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342

Query: 204 ---------PALPKHLLH-------QSLGTVILKPLD----------FGFSQQPEDVLGF 237
                    P+ P+           QSL T    P+           FG S+QPED LGF
Sbjct: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402

Query: 238 DVFDAVWKALAGLTEMELPG-----------QASSSHPTAALGPGSELQPPAAPTNAHSF 286
           D FD   KALA L E EL             Q SSSH T A GPGS    PAA TNA+S 
Sbjct: 403 DPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSL 462

Query: 287 HSTPPVLPLRPPRFQQHLTVYESFFF 312
           +ST  VLP R P+FQQH  VY SF F
Sbjct: 463 NSTFSVLPQRFPQFQQHRAVYNSFSF 488



 Score =  103 bits (257), Expect = 2e-22
 Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 11/107 (10%)

Query: 3   WHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKS---- 58
           WH+I T+E  LCP  RKP PE P+VY PLSQE LQ+IK+ + +++  RK QKIS++    
Sbjct: 42  WHRIRTDENGLCPACRKPYPEDPAVYKPLSQEELQRIKNEKKQKQNERK-QKISENRKHL 100

Query: 59  ------CLSLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSST 99
                   +LV V GLSQ LADP VLK PEYFGK  +I +V IN+ST
Sbjct: 101 ASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNST 147



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 245 KALAGLTEMELPGQA-SSSHPTAALGPGSELQ-----PPAAPTNAHSFHSTPP--VLPLR 296
           K+L  LTEM+ P  A S +H +A       L      P   P+N  SFHS PP      R
Sbjct: 562 KSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFR 621

Query: 297 PP 298
           PP
Sbjct: 622 PP 623


>gi|56550059 CCR4-NOT transcription complex, subunit 4 isoform b
           [Homo sapiens]
          Length = 572

 Score =  183 bits (465), Expect = 2e-46
 Identities = 124/266 (46%), Positives = 141/266 (53%), Gaps = 59/266 (22%)

Query: 106 FTKEKSLAAEHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSP---------- 155
           FTKE+  A +HQEYEQ+LLQE Y LNPN+L LS G  D+NK ++ PLQSP          
Sbjct: 223 FTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSI 282

Query: 156 -------TTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDN----- 203
                    SN D PSPP GL KS+PVIP+ SS HS + P EGA  ESQ LF DN     
Sbjct: 283 GNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342

Query: 204 ---------PALPKHLLH-------QSLGTVILKPLD----------FGFSQQPEDVLGF 237
                    P+ P+           QSL T    P+           FG S+QPED LGF
Sbjct: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402

Query: 238 DVFDAVWKALAGLTEMELPG-----------QASSSHPTAALGPGSELQPPAAPTNAHSF 286
           D FD   KALA L E EL             Q SSSH T A GPGS    PAA TNA+S 
Sbjct: 403 DPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSL 462

Query: 287 HSTPPVLPLRPPRFQQHLTVYESFFF 312
           +ST  VLP R P+FQQH  VY SF F
Sbjct: 463 NSTFSVLPQRFPQFQQHRAVYNSFSF 488



 Score =  103 bits (257), Expect = 2e-22
 Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 11/107 (10%)

Query: 3   WHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKS---- 58
           WH+I T+E  LCP  RKP PE P+VY PLSQE LQ+IK+ + +++  RK QKIS++    
Sbjct: 42  WHRIRTDENGLCPACRKPYPEDPAVYKPLSQEELQRIKNEKKQKQNERK-QKISENRKHL 100

Query: 59  ------CLSLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSST 99
                   +LV V GLSQ LADP VLK PEYFGK  +I +V IN+ST
Sbjct: 101 ASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNST 147


>gi|169213703 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 319

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 17/130 (13%)

Query: 168 GLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGF 227
           G  K + + P   S H    PS GA          +P  P+ LL +SLG  +  PLD GF
Sbjct: 35  GFVKFNLLPPGTGSSHLASAPSTGAST--------SPTRPR-LLPRSLGYPLRHPLDLGF 85

Query: 228 SQQPEDVLGFDVFDAVWKALAGLTEMELPGQA-SSSHPTAALGPGSELQPPAAPTNAHSF 286
            Q P  V        +  A A   +++ P +     +P  AL   S  +PPA   +A +F
Sbjct: 86  -QGPASVRPPST-PHLLSASALSAQLDSPARPHPRCYPPFAL---SAPRPPALGASATAF 140

Query: 287 HST--PPVLP 294
            S+  PP  P
Sbjct: 141 RSSSDPPARP 150


>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
            sapiens]
          Length = 1843

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 108  KEKSLAA------EHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRD 161
            KE+ +AA      E   Y QQL QE  T+  NY  L    D+   +Q  P  S   +  +
Sbjct: 972  KEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSPPISGEDNKWE 1031

Query: 162  RPSPPTG---LPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTV 218
            R S  T    L     +I V  +  + Q   +    + + L   N  L   +L     TV
Sbjct: 1032 RESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQRQTV 1091

Query: 219  ILK 221
             L+
Sbjct: 1092 SLQ 1094


>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
            sapiens]
          Length = 1870

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 9/123 (7%)

Query: 108  KEKSLAA------EHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSPTTSNRD 161
            KE+ +AA      E   Y QQL QE  T+  NY  L    D+   +Q  P  S   +  +
Sbjct: 971  KEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSPPISGEDNKWE 1030

Query: 162  RPSPPTG---LPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTV 218
            R S  T    L     +I V  +  + Q   +    + + L   N  L   +L     TV
Sbjct: 1031 RESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQRQTV 1090

Query: 219  ILK 221
             L+
Sbjct: 1091 SLQ 1093


>gi|122937193 DNB5 [Homo sapiens]
          Length = 748

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 151 PLQSPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKH 209
           PL+ P+       SP   LP S PV+P    G  + LPS  A   S  +   +P  PK+
Sbjct: 292 PLRPPSEKRAAMKSPSLPLPPSPPVLP--EEGPGDSLPSHTATNFSSPISPPSPLTPKY 348


>gi|134304840 KIAA0319 [Homo sapiens]
          Length = 1072

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 253 MELPGQASSSHPTAALGPGS-ELQPPAAPTNAHSFHSTPPVLPLRP---PRFQQHLTV 306
           +EL        P   + PGS E   P  PT+A    STP  LP+ P   PR  + LTV
Sbjct: 280 LELSSVTVEKSPVLTVTPGSTEHSIPTPPTSAAPSESTPSELPISPTTAPRTVKELTV 337


>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
          Length = 1227

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 21/167 (12%)

Query: 152 LQSPTTSNRDRPSPPTGLPK------------------SSPVIPVRSSGHSEQLPSEGAG 193
           +Q P    +  P P  GLP+                   +P++P  +S    QL ++   
Sbjct: 41  MQQPPPPPQPPPPPQAGLPQIIQNAAKLLDKNPFSVSNPNPLLPSPASLQLAQLQAQLTL 100

Query: 194 AESQLL--FLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVFDAVWKALAGLT 251
              +L    + N      +L+Q L  V +    F   + P  + G      V +  A + 
Sbjct: 101 HRLKLAQTAVTNNTAAATVLNQVLSKVAMSQPLFNQLRHPSVITGPHGHAGVPQHAAAIP 160

Query: 252 EMELPGQASS-SHPTAALGPGSELQPPAAPTNAHSFHSTPPVLPLRP 297
               P  A + S P+   GPG  +  P  P +A   H    V+P  P
Sbjct: 161 STRFPSNAIAFSPPSQTRGPGPSMNLPNQPPSAMVMHPFTGVMPQTP 207


>gi|195947361 histidine acid phosphatase domain containing 2A isoform
            2 [Homo sapiens]
          Length = 1408

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 154  SPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGA------ESQLLFLDNPALP 207
            +P +  R   SPP  L + S   P  SSG S  + S G  +       SQ  F D P+L 
Sbjct: 1117 NPFSPPRTLHSPPLQLQQRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSQFGFSDQPSLN 1176

Query: 208  KHLL--HQSLG 216
             H+   HQ LG
Sbjct: 1177 SHVAEEHQGLG 1187


>gi|195947359 histidine acid phosphatase domain containing 2A isoform
            5 [Homo sapiens]
          Length = 1433

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 154  SPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGA------ESQLLFLDNPALP 207
            +P +  R   SPP  L + S   P  SSG S  + S G  +       SQ  F D P+L 
Sbjct: 1142 NPFSPPRTLHSPPLQLQQRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSQFGFSDQPSLN 1201

Query: 208  KHLL--HQSLG 216
             H+   HQ LG
Sbjct: 1202 SHVAEEHQGLG 1212


>gi|66932992 histidine acid phosphatase domain containing 2A isoform 2
            [Homo sapiens]
          Length = 1408

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 8/71 (11%)

Query: 154  SPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGA------ESQLLFLDNPALP 207
            +P +  R   SPP  L + S   P  SSG S  + S G  +       SQ  F D P+L 
Sbjct: 1117 NPFSPPRTLHSPPLQLQQRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSQFGFSDQPSLN 1176

Query: 208  KHLL--HQSLG 216
             H+   HQ LG
Sbjct: 1177 SHVAEEHQGLG 1187


>gi|221219026 pleckstrin homology-like domain, family B, member 1
           isoform b [Homo sapiens]
          Length = 1319

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)

Query: 151 PLQSPTTSNRDRPSPPTGL---PKSSPVIPVRSSGHSEQLP---SEGAGAESQLLFLDNP 204
           PL SP +S       P+G    P   P++P RSS +   L    S  +GA S+     +P
Sbjct: 257 PLSSPASSGSCASHSPSGQEPGPSVPPLVPARSSSYHLALQPPQSRPSGARSE-----SP 311

Query: 205 ALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVFDAVWKALAG-------LTEMELPG 257
            L +   H+   +  L+ L    +  P   +  +   A      G       ++  E P 
Sbjct: 312 RLSRKGGHERPPSPGLRGL---LTDSPAATVLAEARRATESPRLGGQLPVVAISLSEYPA 368

Query: 258 QASSSHPTAALGPGS-ELQPPA-APTNAHSFHSTPPVLPLR-PPRFQQHLTVYES 309
             + S PT+   PGS + QPP  AP N        P  P R PP  ++ LT   S
Sbjct: 369 SGALSQPTSI--PGSPKFQPPVPAPRNKIGTLQDRPPSPFREPPGSERVLTTSPS 421


>gi|221219024 pleckstrin homology-like domain, family B, member 1
           isoform a [Homo sapiens]
          Length = 1377

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)

Query: 151 PLQSPTTSNRDRPSPPTGL---PKSSPVIPVRSSGHSEQLP---SEGAGAESQLLFLDNP 204
           PL SP +S       P+G    P   P++P RSS +   L    S  +GA S+     +P
Sbjct: 257 PLSSPASSGSCASHSPSGQEPGPSVPPLVPARSSSYHLALQPPQSRPSGARSE-----SP 311

Query: 205 ALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVFDAVWKALAG-------LTEMELPG 257
            L +   H+   +  L+ L    +  P   +  +   A      G       ++  E P 
Sbjct: 312 RLSRKGGHERPPSPGLRGL---LTDSPAATVLAEARRATESPRLGGQLPVVAISLSEYPA 368

Query: 258 QASSSHPTAALGPGS-ELQPPA-APTNAHSFHSTPPVLPLR-PPRFQQHLTVYES 309
             + S PT+   PGS + QPP  AP N        P  P R PP  ++ LT   S
Sbjct: 369 SGALSQPTSI--PGSPKFQPPVPAPRNKIGTLQDRPPSPFREPPGSERVLTTSPS 421


>gi|38424073 pleckstrin homology-like domain, family B, member 1
           isoform a [Homo sapiens]
          Length = 1377

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)

Query: 151 PLQSPTTSNRDRPSPPTGL---PKSSPVIPVRSSGHSEQLP---SEGAGAESQLLFLDNP 204
           PL SP +S       P+G    P   P++P RSS +   L    S  +GA S+     +P
Sbjct: 257 PLSSPASSGSCASHSPSGQEPGPSVPPLVPARSSSYHLALQPPQSRPSGARSE-----SP 311

Query: 205 ALPKHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVFDAVWKALAG-------LTEMELPG 257
            L +   H+   +  L+ L    +  P   +  +   A      G       ++  E P 
Sbjct: 312 RLSRKGGHERPPSPGLRGL---LTDSPAATVLAEARRATESPRLGGQLPVVAISLSEYPA 368

Query: 258 QASSSHPTAALGPGS-ELQPPA-APTNAHSFHSTPPVLPLR-PPRFQQHLTVYES 309
             + S PT+   PGS + QPP  AP N        P  P R PP  ++ LT   S
Sbjct: 369 SGALSQPTSI--PGSPKFQPPVPAPRNKIGTLQDRPPSPFREPPGSERVLTTSPS 421


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 22/110 (20%)

Query: 102 QNGRFTKEKSLAAEHQEYEQQLLQEFYTLNP-----NYLHLSMGL-------------DD 143
           + GRFT+ +  A +     QQ  +E  T +P       +  S GL             +D
Sbjct: 336 RGGRFTRSQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKEKSKSPSPPRLTED 395

Query: 144 RNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQ--LPSEG 191
           R K  ++ L   T S  + P P      SSP  P     HSE+   P EG
Sbjct: 396 RKKASLVALPEQTASEEETPPPLLTKEASSP--PPHPQLHSEEEIEPMEG 443


>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
           sapiens]
          Length = 1634

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 42/172 (24%), Positives = 62/172 (36%), Gaps = 28/172 (16%)

Query: 148 QMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALP 207
           Q    QSP   N + PSP T    ++        G S     E   A +Q     N  + 
Sbjct: 476 QETSFQSPEPINNENPSP-TQQEAAAEHPQTAEEGESSLTHQE---APAQTPEFPNVVVA 531

Query: 208 KHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVFDAV--------------WKALAGLTEM 253
           +   H  L    ++PLD GF+  PE +   ++   +               +   G+T  
Sbjct: 532 QPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTN- 590

Query: 254 ELPGQASSSHPTA------ALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPR 299
             PGQ  + HP +       L  G  + P   PT     HSTPP   +  P+
Sbjct: 591 PTPGQDQAQHPVSPSVTVQLLDLGLTITP--EPTTEVG-HSTPPKRTIVSPK 639


>gi|22027471 neuronal PAS domain protein 2 [Homo sapiens]
          Length = 824

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 54/248 (21%), Positives = 88/248 (35%), Gaps = 31/248 (12%)

Query: 65  VAGLSQCLADPVVLKGPEYFGKLDEISRVAINSSTLCQNGRFTKEKSL---AAEHQEYEQ 121
           V GLSQ    P  L  P       ++    +  ST     +F+ + S+     +  E   
Sbjct: 454 VPGLSQAATMPAPLPSPSSCDLTQQLLPQTVLQSTPAPMAQFSAQFSMFQTIKDQLEQRT 513

Query: 122 QLLQEFYTLNPNYLHL---SMGLDDRNKIQMI---PLQSPTTSNRDRPSPPTGLPKSSPV 175
           ++LQ         LH     + L   + +QM    P  S + S+  RP     L + S  
Sbjct: 514 RILQANIRWQQEELHKIQEQLCLVQDSNVQMFLQQPAVSLSFSSTQRPEAQQQLQQRSAA 573

Query: 176 IPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQS--LGTVILKPLDFGFSQQPED 233
           +     G   QLP + + A+            +HLL +S  + T   KP+      Q   
Sbjct: 574 VTQPQLGAGPQLPGQISSAQ---------VTSQHLLRESSVISTQGPKPMRSSQLMQSSG 624

Query: 234 VLGFDVFDAVWKALAGLTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHS----FHST 289
             G  +      A A      LP   + + P +     S+ QP  +P  +H        +
Sbjct: 625 RSGSSLVSPFSSATAA-----LPPSLNLTTPASTSQDASQCQP--SPDFSHDRQLRLLLS 677

Query: 290 PPVLPLRP 297
            P+ P+ P
Sbjct: 678 QPIQPMMP 685


>gi|56117846 synovial sarcoma translocation, chromosome 18 isoform 1
           [Homo sapiens]
          Length = 418

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)

Query: 76  VVLKGPEYFGKLDEISRVAI-----NSSTLCQNGRFTKEKSLAAEHQEYEQQLLQEFYTL 130
           V    P   GK  EI+  AI     +++ L Q    ++ K   +E  +Y+Q L       
Sbjct: 3   VAFAAPRQRGK-GEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQML------- 54

Query: 131 NPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSE 190
           + N ++L+   D    +Q + L +P T N   P  P G+ +S P  P R    S  +PS+
Sbjct: 55  HTNLVYLATIADSNQNMQSL-LPAPPTQNM--PMGPGGMNQSGPPPPPR----SHNMPSD 107

Query: 191 G 191
           G
Sbjct: 108 G 108


>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
           [Homo sapiens]
          Length = 387

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 20/121 (16%)

Query: 76  VVLKGPEYFGKLDEISRVAI-----NSSTLCQNGRFTKEKSLAAEHQEYEQQLLQEFYTL 130
           V    P   GK  EI+  AI     +++ L Q    ++ K   +E  +Y+Q L       
Sbjct: 3   VAFAAPRQRGK-GEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQML------- 54

Query: 131 NPNYLHLSMGLDDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSE 190
           + N ++L+   D    +Q + L +P T N   P  P G+ +S P  P R    S  +PS+
Sbjct: 55  HTNLVYLATIADSNQNMQSL-LPAPPTQNM--PMGPGGMNQSGPPPPPR----SHNMPSD 107

Query: 191 G 191
           G
Sbjct: 108 G 108


>gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens]
          Length = 518

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 29/181 (16%)

Query: 120 EQQLLQEFYTLNPNYLHLSMGLDDRN-----KIQMIPLQSPTTSNRDRPSPPTGLPKSSP 174
           E+   +E   LN N   + +GL+ ++      ++  P  +        PSPP G P ++P
Sbjct: 218 EENFHKEMSKLNQNLNDVLVGLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPDGSPAATP 277

Query: 175 VIPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILKPLDFGFSQQPEDV 234
            I V    + E  P+ GA             LPK       G  +  P     S++ +  
Sbjct: 278 EIRV----NHEPEPAGGA--------TPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQE 325

Query: 235 LGFDVFDAVWKALAGLTEMELP-----GQASSSHPTAALG------PGSELQP-PAAPTN 282
               +F+  +     +T    P     G   S  P+AA G      P    +P PA P  
Sbjct: 326 QILSLFEDTFVPEISVTTPSQPTESPAGSLPSGEPSAAEGTFAVSWPSQTAEPGPAQPAE 385

Query: 283 A 283
           A
Sbjct: 386 A 386


>gi|45827731 scribble isoform a [Homo sapiens]
          Length = 1655

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 42/187 (22%), Positives = 69/187 (36%), Gaps = 29/187 (15%)

Query: 142  DDRNKIQMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRSS-GHSEQLPSEG--------- 191
            ++  + +  P  SP+ ++R  P+ P  L   +PV   ++   H E+L  +          
Sbjct: 1425 EEEQEDEQPPWASPSPTSRQSPASPPPLGGGAPVRTAKAERRHQERLRVQSPEPPAPERA 1484

Query: 192  -AGAESQLLFLDNPALPKHLLHQSLGTVILK-PLDFGFSQQPEDVLGFDVFDAVWKALAG 249
             + AE + L  +  AL +    +SL    L+  +    SQ+     G          L  
Sbjct: 1485 LSPAELRALEAEKRALWRAARMKSLEQDALRAQMVLSRSQEGRGTRG---------PLER 1535

Query: 250  LTEMELPGQASSSHPTAALGPGSELQPPAAPTNAHSFH--------STPPVLPLRPPRFQ 301
            L E   P    S  P   LGP +   P   P +   F         S+ PV  ++ P F 
Sbjct: 1536 LAEAPSPAPTPSPTPVEDLGPQTSTSPGRLPLSGKKFDYRAFAALPSSRPVYDIQSPDFA 1595

Query: 302  QHLTVYE 308
            + L   E
Sbjct: 1596 EELRSLE 1602


>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
            sapiens]
          Length = 1570

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 52/204 (25%), Positives = 70/204 (34%), Gaps = 17/204 (8%)

Query: 94   AINSSTLCQNGRFTKEKSLAAEHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQ 153
            A  SS   +  R  K  S     +  ++  L    T   N LH S  L   N+       
Sbjct: 1064 ARRSSYKAKMARRNKRPSAKEGQESKKRSSLFRKITKQSNLLHTSRSLSSLNR------- 1116

Query: 154  SPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQ 213
            S ++S+    SP  GLP  SP    RS+  S  L   GA ++S       P  P      
Sbjct: 1117 SLSSSDSLPGSPTHGLPARSPTHSYRSTPDSAYL---GASSQSSSPASSTPNSPASSASH 1173

Query: 214  SLGTVILKPLDFGFSQQPEDVLGFDVFDAVWKALAGLTEMELPGQASSSHPTAALGPGSE 273
             +    L  L     +Q          +     L+ L     P QAS   P      GS 
Sbjct: 1174 HIRPSTLHGLSPKLHRQYRSARCKSAGNI---PLSPLAHTPSPTQASPP-PLPGHTVGSS 1229

Query: 274  LQPPAAPTNAHSFHSTPPVLPLRP 297
                + P      HS+PPV+  RP
Sbjct: 1230 HTTQSFPA---KLHSSPPVVRPRP 1250


>gi|38348310 hypothetical protein LOC341032 [Homo sapiens]
          Length = 236

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 256 PGQASSSHPTAAL-------GPGSELQPPAAPTNAHSFHSTPPVLPLRPPRF 300
           P ++S+    AAL        P  + +PPA   NA S  S  P+ PL PP F
Sbjct: 43  PCESSAGQSHAALLEPYFPQEPYGDYRPPALTPNAGSLFSASPLPPLLPPPF 94


>gi|124378039 SEC16 homolog A [Homo sapiens]
          Length = 2357

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 143  DRNKIQMIPLQSPTTSNRDRPSPPTGLPK----SSPVIPVRSSGHSEQLPSEGAGAESQL 198
            D  K Q + L  P    +  P PPT +PK    + P +P              AG  ++ 
Sbjct: 2134 DEKKNQWVNLNEPEEEKKAPPPPPTSMPKTVQAAPPALPGPPGAPVNMYSRRAAGTRARY 2193

Query: 199  LFLDNPA 205
            + + NP+
Sbjct: 2194 VDVLNPS 2200


>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
           protein isoform 1 [Homo sapiens]
          Length = 1635

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 42/172 (24%), Positives = 61/172 (35%), Gaps = 28/172 (16%)

Query: 148 QMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALP 207
           Q    QSP   N + PSP T    ++        G S     E   A +Q     N  + 
Sbjct: 476 QETSFQSPEPINNENPSP-TQQEAAAEHPQTAEEGESSLTHQE---APAQTPEFPNVVVA 531

Query: 208 KHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVFDAV--------------WKALAGLTEM 253
           +   H  L    ++PLD GF+  PE     ++   +               +   G+T  
Sbjct: 532 QPPEHSHLTQATVQPLDLGFTITPESKTEVELSPTMKETPTQPPKKVVPQLRVYQGVTN- 590

Query: 254 ELPGQASSSHPTA------ALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPR 299
             PGQ  + HP +       L  G  + P   PT     HSTPP   +  P+
Sbjct: 591 PTPGQDQAQHPVSPSVTVQLLDLGLTITP--EPTTEVG-HSTPPKRTIVSPK 639


>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
           protein isoform 2 [Homo sapiens]
          Length = 1700

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 42/172 (24%), Positives = 61/172 (35%), Gaps = 28/172 (16%)

Query: 148 QMIPLQSPTTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDNPALP 207
           Q    QSP   N + PSP T    ++        G S     E   A +Q     N  + 
Sbjct: 476 QETSFQSPEPINNENPSP-TQQEAAAEHPQTAEEGESSLTHQE---APAQTPEFPNVVVA 531

Query: 208 KHLLHQSLGTVILKPLDFGFSQQPEDVLGFDVFDAV--------------WKALAGLTEM 253
           +   H  L    ++PLD GF+  PE     ++   +               +   G+T  
Sbjct: 532 QPPEHSHLTQATVQPLDLGFTITPESKTEVELSPTMKETPTQPPKKVVPQLRVYQGVTN- 590

Query: 254 ELPGQASSSHPTA------ALGPGSELQPPAAPTNAHSFHSTPPVLPLRPPR 299
             PGQ  + HP +       L  G  + P   PT     HSTPP   +  P+
Sbjct: 591 PTPGQDQAQHPVSPSVTVQLLDLGLTITP--EPTTEVG-HSTPPKRTIVSPK 639


>gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens]
          Length = 409

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 17/107 (15%)

Query: 120 EQQLLQEFYTLNPNYLHLSMGLDDRN-----KIQMIPLQSPTTSNRDRPSPPTGLPKSSP 174
           E+   +E   LN N   + +GL+ ++      ++  P  +        PSPP G P ++P
Sbjct: 218 EENFHKEMSKLNQNLNDVLVGLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPDGSPAATP 277

Query: 175 VIPVRSSGHSEQLPSEGAGAESQLLFLDNPALPKHLLHQSLGTVILK 221
            I V    + E  P+ GA             LPK     SL  V+++
Sbjct: 278 EIRV----NHEPEPAGGA--------TPGATLPKSPSQSSLPAVVVE 312


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,734,126
Number of Sequences: 37866
Number of extensions: 752660
Number of successful extensions: 4383
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 4262
Number of HSP's gapped (non-prelim): 214
length of query: 318
length of database: 18,247,518
effective HSP length: 102
effective length of query: 216
effective length of database: 14,385,186
effective search space: 3107200176
effective search space used: 3107200176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.