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Search of human proteins with 239750101
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
(365 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 761 0.0
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 690 0.0
gi|239755585 PREDICTED: hypothetical protein [Homo sapiens] 673 0.0
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 52 1e-06
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 52 1e-06
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 52 1e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 52 1e-06
gi|157168329 formin 1 [Homo sapiens] 50 2e-06
gi|19924099 synapsin I isoform Ia [Homo sapiens] 50 2e-06
gi|19924097 synapsin I isoform Ib [Homo sapiens] 50 2e-06
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 50 2e-06
gi|153792074 proline rich 12 [Homo sapiens] 50 2e-06
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 50 4e-06
gi|52485606 formin-like 2 [Homo sapiens] 49 5e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 49 7e-06
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 49 7e-06
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 48 1e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 48 2e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 48 2e-05
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 48 2e-05
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ... 48 2e-05
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 48 2e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 48 2e-05
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 47 2e-05
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 47 3e-05
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 47 3e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 3e-05
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 761 bits (1966), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP
Sbjct: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
Query: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP
Sbjct: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
Query: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG
Sbjct: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ
Sbjct: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA
Sbjct: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
Query: 301 ERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
ERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP
Sbjct: 301 ERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
Query: 361 FTLGG 365
FTLGG
Sbjct: 361 FTLGG 365
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 690 bits (1780), Expect = 0.0
Identities = 336/356 (94%), Positives = 338/356 (94%), Gaps = 5/356 (1%)
Query: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP
Sbjct: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
Query: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP
Sbjct: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
Query: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG
Sbjct: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ
Sbjct: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA
Sbjct: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
Query: 301 ERSRGEPRPAEPRAPPRPPPAARRPPPPPAP-----GAPARPLRGRRSHGPAARPR 351
ERSRGEPRPAEPRAPPRPPPAARRPPP AP G+P R AARP+
Sbjct: 301 ERSRGEPRPAEPRAPPRPPPAARRPPPATAPSPRRAGSPPTREEEPRPRRSAARPQ 356
>gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 673 bits (1737), Expect = 0.0
Identities = 324/327 (99%), Positives = 324/327 (99%)
Query: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP
Sbjct: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
Query: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP
Sbjct: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
Query: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG
Sbjct: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ
Sbjct: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA
Sbjct: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
Query: 301 ERSRGEPRPAEPRAPPRPPPAARRPPP 327
ERSRGEPRPAEPRAPPRPPPAAR P
Sbjct: 301 ERSRGEPRPAEPRAPPRPPPAARPQCP 327
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 51.6 bits (122), Expect = 1e-06
Identities = 40/132 (30%), Positives = 48/132 (36%), Gaps = 43/132 (32%)
Query: 272 GSRGSGRAATTTRPQTTPAAASP-DLPQPAERSRGEPR---------------------- 308
G G G + + PQ PA SP L A R + P
Sbjct: 307 GGAGQGMSTPGSSPQHRPAGVSPLSLSTEARRQQASPTLSPLSPITQAVAMDALSLEQQL 366
Query: 309 -------------PAEPRAPPRPPPAARRPPPPPAPGAPAR-----PLRGRRS--HGPAA 348
P +P+ PP PPPA+++PPPPP P AP R PL S GP
Sbjct: 367 PYAFFTQAGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQP 426
Query: 349 RPRAVPTTSLAP 360
P AV S P
Sbjct: 427 PPLAVTVPSSLP 438
Score = 30.4 bits (67), Expect = 2.6
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 8 GALRPRPSPHGVQGEKPA---PIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLPYE 64
G+ +P P P PA P PPPP Q A P L+P L P P P
Sbjct: 375 GSQQPPPQPQPPPPPPPASQQPPPPPPPQ----APVRLPPGGPLLPSASLTRGPQPPP-- 428
Query: 65 HLADSVEAVLPKA 77
LA +V + LP++
Sbjct: 429 -LAVTVPSSLPQS 440
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 51.6 bits (122), Expect = 1e-06
Identities = 40/132 (30%), Positives = 48/132 (36%), Gaps = 43/132 (32%)
Query: 272 GSRGSGRAATTTRPQTTPAAASP-DLPQPAERSRGEPR---------------------- 308
G G G + + PQ PA SP L A R + P
Sbjct: 291 GGAGQGMSTPGSSPQHRPAGVSPLSLSTEARRQQASPTLSPLSPITQAVAMDALSLEQQL 350
Query: 309 -------------PAEPRAPPRPPPAARRPPPPPAPGAPAR-----PLRGRRS--HGPAA 348
P +P+ PP PPPA+++PPPPP P AP R PL S GP
Sbjct: 351 PYAFFTQAGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQP 410
Query: 349 RPRAVPTTSLAP 360
P AV S P
Sbjct: 411 PPLAVTVPSSLP 422
Score = 30.4 bits (67), Expect = 2.6
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 8 GALRPRPSPHGVQGEKPA---PIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLPYE 64
G+ +P P P PA P PPPP Q A P L+P L P P P
Sbjct: 359 GSQQPPPQPQPPPPPPPASQQPPPPPPPQ----APVRLPPGGPLLPSASLTRGPQPPP-- 412
Query: 65 HLADSVEAVLPKA 77
LA +V + LP++
Sbjct: 413 -LAVTVPSSLPQS 424
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
R +++ + + E+ QQ+ +G P+ + RG+ ++ P+ +P + SP LP+
Sbjct: 350 RNMDKQRQKRLQEQKQQEGYDGGPN-LRTKVWQRGTPSSSPYVSPRHSPWS-SPKLPKKV 407
Query: 301 ERSRGEPR------PAEPRAPPRPPPAARRPPPPPAPGAPARP 337
+ R P P P PP PPP+++R PPPP P P P
Sbjct: 408 QTVRSRPLSPVATPPPPPPPPPPPPPSSQRLPPPPPPPPPPLP 450
Score = 28.5 bits (62), Expect = 9.9
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 10 LRPRP-SPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLPYEHL 66
+R RP SP P P PPPP P + +PPP P P PLP + L
Sbjct: 410 VRSRPLSPVATPPPPPPPPPPPP------------PSSQRLPPP-PPPPPPPLPEKKL 454
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 51.6 bits (122), Expect = 1e-06
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAAS--PDLPQPAERSRGEPRPAEPRAPPRPP 319
G P+G G++ G +PQ P P P P R +G P P P PP
Sbjct: 223 GKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPP 282
Query: 320 PAAR--RPPPPPAPGAPARPLRGR 341
PA + PPPPP G P RP +G+
Sbjct: 283 PAGKPQGPPPPPQGGRPHRPPQGQ 306
Score = 48.1 bits (113), Expect = 1e-05
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAAS--PDLPQPAERSRGEPRPAEPRAPPRPP 319
G P+G G++ G +P+ P+ P P P P P E P RPP
Sbjct: 202 GKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPP 261
Query: 320 PAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVP 354
P R PPP G P +PL PA +P+ P
Sbjct: 262 PPGRPQGPPPPGGNPQQPL-----PPPAGKPQGPP 291
Score = 47.0 bits (110), Expect = 3e-05
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPPRPPP 320
G P+G G++ G +P+ P PQ +S+G P RP +P PP P
Sbjct: 76 GKPEGPPPQGGNQSQGPPPRPGKPEGQP-------PQGGNQSQGPPPRPGKPEGPP-PQG 127
Query: 321 AARRPPPPPAPGAP--ARPLRGRRSHGPAARP 350
+ PPP PG P P G +S GP RP
Sbjct: 128 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP 159
Score = 46.6 bits (109), Expect = 4e-05
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPPRPPP 320
G P+G G++ G +P+ P PQ +S+G P RP +P PP P
Sbjct: 118 GKPEGPPPQGGNQSQGPPPRPGKPEGPP-------PQGGNQSQGPPPRPGKPEGPP-PQG 169
Query: 321 AARRPPPPPAPGAP--ARPLRGRRSHGPAARP 350
+ PPP PG P P G +S GP RP
Sbjct: 170 GNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRP 201
Score = 45.8 bits (107), Expect = 6e-05
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 17/129 (13%)
Query: 225 LKILVLLLLPVQSGQQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTR 284
L +L + LL + S Q + Q ++ G P+G G++ +
Sbjct: 3 LILLSVALLALSSAQSLNEDVSQEE------SPSVISGKPEGRRPQGGNQPQRTPPPPGK 56
Query: 285 PQTTPAAASPDLPQPAERSRGEP-RPAEPRAPPRPPPAARRPPPPPAPGAP--ARPLRGR 341
P+ P PQ +S+G P RP +P PP P + PPP PG P P G
Sbjct: 57 PEGRP-------PQGGNQSQGPPPRPGKPEGPP-PQGGNQSQGPPPRPGKPEGQPPQGGN 108
Query: 342 RSHGPAARP 350
+S GP RP
Sbjct: 109 QSQGPPPRP 117
Score = 45.1 bits (105), Expect = 1e-04
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPPRPPP 320
G P+G G++ G +P+ P PQ +S+G P RP +P PP P
Sbjct: 97 GKPEGQPPQGGNQSQGPPPRPGKPEGPP-------PQGGNQSQGPPPRPGKPEGPP-PQG 148
Query: 321 AARRPPPPPAPGAP--ARPLRGRRSHGPAARP 350
+ PPP PG P P G +S GP P
Sbjct: 149 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHP 180
Score = 45.1 bits (105), Expect = 1e-04
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPPRPPP 320
G P+G G++ G +P+ P PQ +S+G P P +P PP P
Sbjct: 139 GKPEGPPPQGGNQSQGPPPRPGKPEGPP-------PQGGNQSQGPPPHPGKPEGPP-PQG 190
Query: 321 AARRPPPPPAPGAP--ARPLRGRRSHGPAARP 350
+ PPP PG P P G +S GP RP
Sbjct: 191 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP 222
Score = 43.1 bits (100), Expect = 4e-04
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPPRPPP 320
G P+G G++ G +P+ P PQ +S+G P RP +P PP P
Sbjct: 160 GKPEGPPPQGGNQSQGPPPHPGKPEGPP-------PQGGNQSQGPPPRPGKPEGPP-PQG 211
Query: 321 AARRPPPPPAPGAPARP--LRGRRSHGPAARP 350
+ PPP PG P P G + GP P
Sbjct: 212 GNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHP 243
Score = 31.2 bits (69), Expect = 1.5
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Query: 6 ADGALRPR-PSPHGVQGEKPAPI-------PPPPAQESNGASCGATPHNSLIPPPLLPHY 57
+ G +P+ P PH + + P P PPPP + G P L PP P
Sbjct: 230 SQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQG 289
Query: 58 PCPLP 62
P P P
Sbjct: 290 PPPPP 294
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/88 (37%), Positives = 37/88 (42%), Gaps = 20/88 (22%)
Query: 276 SGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPR---PPPAARRPPPPPAPG 332
SG + + P P +A P LP P P P P PP PPP PPPPP P
Sbjct: 660 SGLGSLSPAPPMPPVSAGPPLPPP-------PPPPPPLPPPSSAGPPPP---PPPPPLPN 709
Query: 333 APARPLRGRRSHGPAARPRAVPTTSLAP 360
+PA P P P A P LAP
Sbjct: 710 SPAPP-------NPGGPPPAPPPPGLAP 730
Score = 38.5 bits (88), Expect = 0.010
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPG 332
P P++A P P P P P P PP PP PPPP PG
Sbjct: 689 PLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP-PG 735
Score = 34.7 bits (78), Expect = 0.14
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 8 GALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
G+L P P V P P PPPP S P PPP LP+ P P
Sbjct: 663 GSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPP--PPPPLPNSPAP 713
Score = 30.4 bits (67), Expect = 2.6
Identities = 28/91 (30%), Positives = 32/91 (35%), Gaps = 16/91 (17%)
Query: 290 AAASPDLPQPAERSRGEPRPAEPRAPPRP--------------PPAARRPPPPPAPGAPA 335
AA P + + + P P PP P PP + PP PP P P
Sbjct: 629 AALQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPP-PPP 687
Query: 336 RPLRGRRSHGPAARPRAVP-TTSLAPFTLGG 365
PL S GP P P S AP GG
Sbjct: 688 PPLPPPSSAGPPPPPPPPPLPNSPAPPNPGG 718
Score = 28.9 bits (63), Expect = 7.6
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 12 PRPSPHGVQGEKPAPIPPP----PAQESNGASCGATPHNSLIPPP 52
P P P G P P PPP PA + G A P L PPP
Sbjct: 689 PLPPPSSA-GPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPP 732
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 50.4 bits (119), Expect = 2e-06
Identities = 36/108 (33%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 256 QQQLVEGAPDGVGHLHGSR---GSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEP 312
QQ + AP G SR G A RP +P+ P A R PA P
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP 575
Query: 313 RAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
+A PP +R PP P PA P R GP PR P T+ P
Sbjct: 576 KASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPV--PRTGPPTTQQP 621
Score = 39.7 bits (91), Expect = 0.004
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 21/116 (18%)
Query: 238 GQQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAAS-PDL 296
G QRQ LQ R P G HL G G A + PQ P+ S P
Sbjct: 473 GPQRQGPPLQQRPP------------PQGQQHLSGL---GPPAGSPLPQRLPSPTSAPQQ 517
Query: 297 P--QPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRS---HGPA 347
P Q A ++G+ R + P A P A RPP P+P A P + R GPA
Sbjct: 518 PASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPA 573
Score = 35.8 bits (81), Expect = 0.062
Identities = 46/202 (22%), Positives = 73/202 (36%), Gaps = 32/202 (15%)
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
+ GGL V+A+ +D G+ + L H + ++ +++V L++
Sbjct: 363 IFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDH----QDEDKQLIVELVV------N 412
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLH-GSRGSGRAATTTRPQTTPAAASPDLPQP 299
+ + L + Q + + G G L G + S + A Q P P P P
Sbjct: 413 KMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGP 472
Query: 300 AERSRGEPR-----------------PAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRR 342
+ +G P PA P R P P P + AP +GR+
Sbjct: 473 GPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQ 532
Query: 343 SH----GPAARPRAVPTTSLAP 360
S GP A P A P S +P
Sbjct: 533 SRPVAGGPGAPPAARPPASPSP 554
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 12/65 (18%)
Query: 285 PQTTPAAASPD--------LPQPAERSRGEPRPAEPRAPPRPPPAARRPP----PPPAPG 332
PQ P A P +P+ + +PRP+ P RP P + P PPPA
Sbjct: 591 PQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATA 650
Query: 333 APARP 337
A P
Sbjct: 651 AAGGP 655
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 315 PPRPPPAARRPPPPPAPGAPARPLRGRRSHG--PAARPRA 352
PP PPP A P P PG RS G PAA P A
Sbjct: 30 PPPPPPGAHSPGATPGPGTAT----AERSSGVAPAASPAA 65
Score = 29.3 bits (64), Expect = 5.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 14 PSPHGVQGEKPAPIPPPPAQESNGASCG----ATPHNSLIPPPLLPHYPCP 60
P+ + ++P P PPPP S GA+ G +S + P P P P
Sbjct: 18 PNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSP 68
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 50.4 bits (119), Expect = 2e-06
Identities = 36/108 (33%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 256 QQQLVEGAPDGVGHLHGSR---GSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEP 312
QQ + AP G SR G A RP +P+ P A R PA P
Sbjct: 516 QQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP 575
Query: 313 RAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
+A PP +R PP P PA P R GP PR P T+ P
Sbjct: 576 KASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPV--PRTGPPTTQQP 621
Score = 39.7 bits (91), Expect = 0.004
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 21/116 (18%)
Query: 238 GQQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAAS-PDL 296
G QRQ LQ R P G HL G G A + PQ P+ S P
Sbjct: 473 GPQRQGPPLQQRPP------------PQGQQHLSGL---GPPAGSPLPQRLPSPTSAPQQ 517
Query: 297 P--QPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRS---HGPA 347
P Q A ++G+ R + P A P A RPP P+P A P + R GPA
Sbjct: 518 PASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPA 573
Score = 35.8 bits (81), Expect = 0.062
Identities = 46/202 (22%), Positives = 73/202 (36%), Gaps = 32/202 (15%)
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
+ GGL V+A+ +D G+ + L H + ++ +++V L++
Sbjct: 363 IFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDH----QDEDKQLIVELVV------N 412
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLH-GSRGSGRAATTTRPQTTPAAASPDLPQP 299
+ + L + Q + + G G L G + S + A Q P P P P
Sbjct: 413 KMAQALPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGP 472
Query: 300 AERSRGEPR-----------------PAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRR 342
+ +G P PA P R P P P + AP +GR+
Sbjct: 473 GPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQ 532
Query: 343 SH----GPAARPRAVPTTSLAP 360
S GP A P A P S +P
Sbjct: 533 SRPVAGGPGAPPAARPPASPSP 554
Score = 30.8 bits (68), Expect = 2.0
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 315 PPRPPPAARRPPPPPAPGAPARPLRGRRSHG--PAARPRA 352
PP PPP A P P PG RS G PAA P A
Sbjct: 30 PPPPPPGAHSPGATPGPGTAT----AERSSGVAPAASPAA 65
Score = 30.0 bits (66), Expect = 3.4
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 262 GAPDGVGHLHG--SRGSGRAATTTR-------PQTTPAAASPDLPQ-PAERSRGEPRPAE 311
GAP G G + G A T + P+T P P P R +P+ A+
Sbjct: 579 GAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQ 638
Query: 312 PRAPPRPPPAARRPPPPPAPGAPARPLRGR 341
+ PPPA PP P A P + +
Sbjct: 639 KPSQDVPPPATAAAGGPPHPQLKASPAQAQ 668
Score = 29.3 bits (64), Expect = 5.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 14 PSPHGVQGEKPAPIPPPPAQESNGASCG----ATPHNSLIPPPLLPHYPCP 60
P+ + ++P P PPPP S GA+ G +S + P P P P
Sbjct: 18 PNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSP 68
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 236 QSGQQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPD 295
++ +R+ E+++ ER E AP+ S G + P +++SP
Sbjct: 46 KASSRREAEEMKLEPLQER------EPAPEE-NLTWSSSGGDEKVLPSIPLRCHSSSSPV 98
Query: 296 LPQPAERSRGEPRP---AEPRAPPRPPPAARRPPPPPAPGAPA---RPLRG-RRSHGPAA 348
P+ R R +PR ++P PPP AR PPPPP P PA R RG RR P +
Sbjct: 99 CPRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGS 158
Query: 349 RPR 351
RP+
Sbjct: 159 RPQ 161
Score = 28.5 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 17/40 (42%)
Query: 23 KPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
KP P P P A+ + A P PPP P P P P
Sbjct: 103 KPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAP 142
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 50.4 bits (119), Expect = 2e-06
Identities = 35/95 (36%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 275 GSGRAATTTRPQTTPAAASPDLPQ----PAERSRGEPRPA--EPRAPPRPPPAAR---RP 325
G +T P PAAA P P P+ S G P P E + PP PPPA +P
Sbjct: 1412 GPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQP 1471
Query: 326 PPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
PPPP P PA P+ P PT S P
Sbjct: 1472 PPPPPPPQPAL---------PSPPPLVAPTPSSPP 1497
Score = 46.6 bits (109), Expect = 4e-05
Identities = 27/73 (36%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 282 TTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGR 341
T P TP P P P + + P P P PPP PPPPPA +P P
Sbjct: 1460 TPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP---- 1515
Query: 342 RSHGPAARPRAVP 354
PAA P A P
Sbjct: 1516 --PPPAAAPLAAP 1526
Score = 44.7 bits (104), Expect = 1e-04
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 280 ATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRA---PPRPPPAARRPPPPPAPGAPAR 336
A T +PQ P P P+ P P+ P PP PPPA PPPPP P A
Sbjct: 1464 APTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPL 1523
Query: 337 PLRGRRSHGPAARPRAVPTT 356
P+ +P T
Sbjct: 1524 AAPPEEPAAPSPEDPELPDT 1543
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/71 (35%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 284 RPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRS 343
+P TP A PQP P P +P P PP A P PP P P P S
Sbjct: 1456 KPPPTPPPAPTPQPQPPP----PPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPS 1511
Query: 344 HGPAARPRAVP 354
P P A P
Sbjct: 1512 PPPPPPPAAAP 1522
Score = 37.0 bits (84), Expect = 0.028
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 285 PQTTPAAAS-PDLPQPAERSRG----EP--RPAEPRAPPRPPPAARRPPPPPAPGAPARP 337
PQ P+ S P P+ G EP R P+ PP PP PPPPP P
Sbjct: 799 PQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPP-----PPPPPMPLQLEAH 853
Query: 338 LRGRRSHGPAARPRAVPTTSLAP 360
LR A PR P SL P
Sbjct: 854 LRSHGLEPAAPSPRLRPEESLDP 876
Score = 34.3 bits (77), Expect = 0.18
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 19/106 (17%)
Query: 263 APDGV-GHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSR----------------- 304
+PD + G L+G +G Q P A SP L S
Sbjct: 498 SPDQLQGQLYGVQGEPYPGPAAHSQGLPTA-SPSLSYSTGHSPALSGHGGGWGPSSLGGG 556
Query: 305 GEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARP 350
GE P+ P + PPA RPP +PGAP + L + P P
Sbjct: 557 GEASPSHIIRPLQSPPATGRPPGVGSPGAPGKYLSSVLASAPFLAP 602
Score = 31.2 bits (69), Expect = 1.5
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 290 AAASPDLPQPAERSRGEPRPAEP-RAPPRPP--------PAARRPPPPPAP 331
AAA PQ S P P P RA PR PA+ +PPPPP P
Sbjct: 256 AAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPP 306
Score = 31.2 bits (69), Expect = 1.5
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 285 PQTTPAAASPDLPQPAERSRGE-------PRPAEPRAPPRPPPAARRPPPPPAPGAP-AR 336
P+ P S +PA G+ P P PR R P A+R PP G P R
Sbjct: 1118 PRRLPDLVSSCRSRPALSPLGDIDFCPPNPGPDGPRRRGRKPTKAKRDGPPRPRGRPRIR 1177
Query: 337 PLRGRRSHGPAA 348
PL + GPA+
Sbjct: 1178 PLEVPTTAGPAS 1189
Score = 31.2 bits (69), Expect = 1.5
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 11 RPRPSPHGVQGEKPAPIPPP----PAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
+P P+P +P P PPP PA S TP +S PPPL P P +P
Sbjct: 1456 KPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTP-SSPPPPPLPPPPPPAMP 1510
Score = 30.4 bits (67), Expect = 2.6
Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 11/75 (14%)
Query: 263 APDGVGHLHGSRGSGRAATTTR----PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRP 318
A D G R SG T P P S +P + P A P PP P
Sbjct: 986 AYDPYGPYCPGRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAP--PPPP 1043
Query: 319 PPAARRPPPPPAPGA 333
P PPPPPAP +
Sbjct: 1044 P-----PPPPPAPAS 1053
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 295 DLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVP 354
DL + S G P+P P PP P A + P ++G GPAA + +P
Sbjct: 468 DLSKAPSYSGGPPQP--PSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLP 525
Query: 355 TTS 357
T S
Sbjct: 526 TAS 528
Score = 30.0 bits (66), Expect = 3.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 297 PQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPAR 336
P P RS P PPP A P PPP P P +
Sbjct: 1671 PVPVRRSGQAKNPVSAGGSSAPPPKA--PAPPPKPETPEK 1708
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Query: 270 LHGSRGSGRAATTTRPQTTPAAASPDLPQPAERS--------RGEPRPAEPRAPPRPPPA 321
L S + AA + PQ + + P P ER+ + RPA + PP PPPA
Sbjct: 248 LASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPPA 307
Score = 29.6 bits (65), Expect = 4.4
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 280 ATTTRPQTTPAAASPDLPQPAERS-RGEPRPAEPRAPPR--PPPAARRPPPPPAPGAPAR 336
A+ P+T P+ P + EP P + PPP PPPPP P APA
Sbjct: 998 ASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPP----PPPPPPPPAPAS 1053
Query: 337 PLRG 340
+G
Sbjct: 1054 EPKG 1057
Score = 29.6 bits (65), Expect = 4.4
Identities = 25/77 (32%), Positives = 27/77 (35%), Gaps = 20/77 (25%)
Query: 285 PQTTPAAASPD---LPQPAERSRGEPRPAEPRAPPRPPPAA----------RRPPPPPAP 331
P P +SP LP P P PA P PP PPPAA P P
Sbjct: 1487 PLVAPTPSSPPPPPLPPP-------PPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPE 1539
Query: 332 GAPARPLRGRRSHGPAA 348
RPL + AA
Sbjct: 1540 LPDTRPLHLAKKQETAA 1556
Score = 28.9 bits (63), Expect = 7.6
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 19/95 (20%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQ-PAERSRGEPRPA----EPRAPP 316
GA D G G P P A P P P S P +P PP
Sbjct: 957 GAADDYGKAGPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPP 1016
Query: 317 RPP--------------PAARRPPPPPAPGAPARP 337
P P PPPPP P P P
Sbjct: 1017 ELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPAP 1051
Score = 28.9 bits (63), Expect = 7.6
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 24 PAPIPPPPAQESNGASCGATPHNSLI---PPPLLPHYPCPLP 62
P P+P P+ SNG TP L+ PPP P P P P
Sbjct: 1433 PPPLPGLPSANSNG-----TPEPPLLEEKPPPTPPPAPTPQP 1469
Score = 28.9 bits (63), Expect = 7.6
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPP------PLLPHYPCPLP 62
P P+P P P PP PA S TP + PP P +P P P P
Sbjct: 1461 PPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 1517
Score = 28.9 bits (63), Expect = 7.6
Identities = 26/95 (27%), Positives = 33/95 (34%), Gaps = 26/95 (27%)
Query: 290 AAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPA-------------- 335
+A P P P + + + P + P A P PPAP P+
Sbjct: 1690 SAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAM--PEPPAPEKPSLLRPVEKEKEKEKV 1747
Query: 336 ----RPLRGRR-SHGPAARPR-----AVPTTSLAP 360
RPLRG R + G RP P TS P
Sbjct: 1748 TRGERPLRGERATSGRQTRPERSLATGQPATSRLP 1782
Score = 28.5 bits (62), Expect = 9.9
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 10 LRPRPSPHGVQGEKPAPIPPPPAQESNGASCG----ATPHNSLIPPPLLPHYPCP 60
L +P P P P PPPP A P S PPP LP P P
Sbjct: 1453 LEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPP 1507
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 49.7 bits (117), Expect = 4e-06
Identities = 45/142 (31%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 219 WGRGKELKILVLLLLPVQSGQQRQ-----VEQLQHRHQHERGQQQLVEGAPDGVGH-LHG 272
WG G++L L L+LP ++R E R + L+ P + G
Sbjct: 415 WGSGEDLAALAHLVLPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSALDSGPRG 474
Query: 273 SRGSGRAATTTRPQTTPAAASPDL-PQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAP 331
+R S + RP P +AS L P + E P R PP P PAA P P
Sbjct: 475 ARDSPPGSPRRRPGPGPRSASASLLPDAFALTAFECEPQALRRPPGPFPAAPAAPDGADP 534
Query: 332 G-APARPLRGRRSHGPAARPRA 352
G AP P +RS GP RP A
Sbjct: 535 GEAPTPPSSAQRSPGP--RPSA 554
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 49.3 bits (116), Expect = 5e-06
Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 263 APDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAA 322
A + VG G+ SG P P S D P+ + P P PP PPP
Sbjct: 510 AGNSVGPTMGAASSGPLP----PPPPPLPPSSDTPETVQNG-----PVTPPMPPPPPPPP 560
Query: 323 RRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
PPPPP P P PL G + A P A P S P
Sbjct: 561 --PPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPP 596
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
P P P P P PPPP G + P L PP LP P PLP
Sbjct: 551 PMPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPP--LPSAP-PLP 598
Score = 29.6 bits (65), Expect = 4.4
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 18 GVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
G P P PPPP S+ T N + PP+ P P P P
Sbjct: 519 GAASSGPLPPPPPPLPPSSDTP--ETVQNGPVTPPMPPPPPPPPP 561
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 48.9 bits (115), Expect = 7e-06
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPA 321
G P+G G++ G +P+ P PQ +S+G P P P P RPPP
Sbjct: 76 GKPEGRPPQGGNQSQGPPPHPGKPERPP-------PQGGNQSQGTPPP--PGKPERPPPQ 126
Query: 322 ----ARRPPPPPAPGAPAR--PLRGRRSHGPAARP 350
+ RPPPPP G P R P G +S GP P
Sbjct: 127 GGNQSHRPPPPP--GKPERPPPQGGNQSQGPPPHP 159
Score = 46.2 bits (108), Expect = 5e-05
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAAS--PDLPQPAERSRGEPRPAEPRAPPRPP 319
G P+G G++ + +PQ P P P P + +G P P+ P
Sbjct: 160 GKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAP 219
Query: 320 PAARR--PPPPPAPGAPARPLRGRR 342
PA + PPPPP G P RP +G++
Sbjct: 220 PAGKPQGPPPPPQGGRPPRPAQGQQ 244
Score = 38.9 bits (89), Expect = 0.007
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 259 LVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRP 318
L+ G P+G G++ +PQ P PQ +S+G P P P P
Sbjct: 31 LISGKPEGRRPQGGNQPQRPPPPPGKPQGPP-------PQGGNQSQGPPPP--PGKPEGR 81
Query: 319 PPAA--RRPPPPPAPGAPAR--PLRGRRSHG---PAARPRAVP 354
PP + PPP PG P R P G +S G P +P P
Sbjct: 82 PPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPP 124
Score = 38.5 bits (88), Expect = 0.010
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 289 PAAASPDLPQPAE----RSRGEPRPAEPRAPPR--------PPPAARRPPPPPAPGAPAR 336
P P+ P P E RS P P +P+ PP+ PPP + PPPA G P +
Sbjct: 157 PHPGKPEGPPPQEGNKSRSARSP-PGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQ 215
Query: 337 PLRGRRSHGPAARPRAVP 354
P PA +P+ P
Sbjct: 216 P-----QAPPAGKPQGPP 228
Score = 29.6 bits (65), Expect = 4.4
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 8/55 (14%)
Query: 14 PSPHGVQGEKPAP--------IPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
P PH + E+P P PPPP + G + PPP P P P
Sbjct: 92 PPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPP 146
Score = 29.6 bits (65), Expect = 4.4
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 16 PHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
P +G KP PPPP + G P PP P P P P
Sbjct: 186 PPQQEGNKPQG-PPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPP 231
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 48.9 bits (115), Expect = 7e-06
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 272 GSRGSGRA-ATTTRPQTTPAAASPDL-----PQPAERSRGEPRPAEPRAPPRPPPAARRP 325
GSR R+ +++ P TP+ P + P P GE +P PP PP A +
Sbjct: 594 GSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTT 653
Query: 326 PPPPAPGAPARPLRGRRSHGPAARP 350
P P P P P RR PA P
Sbjct: 654 APVPEPTKPGDPREARRKERPARTP 678
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 272 GSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAP 331
G G P P A P P G+PR A + P P RR
Sbjct: 630 GKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKPGDPREARRKERPARTPPRRRTLSGSGS 689
Query: 332 GAPARPLRGRRSHGPAARPRAVPTTSLA 359
G+ G G ++R R++ +S++
Sbjct: 690 GS------GSSYSGSSSRSRSLSVSSVS 711
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 48.1 bits (113), Expect = 1e-05
Identities = 31/82 (37%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 282 TTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPG-APARPLRG 340
+T P+ + A SP QP E PA+P PP PPP + P PP P PA P
Sbjct: 1381 STAPEASLPARSPPSRQPPSGGPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPP--- 1437
Query: 341 RRSHGPAARPRAVPTTSLAPFT 362
S G P A P S P T
Sbjct: 1438 --SLGDPGEPAAHPGPSTGPST 1457
Score = 35.8 bits (81), Expect = 0.062
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 269 HLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPP 328
HL + + A + + P+ P+ P P P P+ P PPP P P
Sbjct: 1379 HLSTAPEASLPARSPPSRQPPSGGPPEAPPAQPPPPPPPPPPPPQQPLPPPP--NLEPAP 1436
Query: 329 PAPGAPARP-LRGRRSHGPAARPRAVPTTSLA 359
P+ G P P S GP+ + V T S++
Sbjct: 1437 PSLGDPGEPAAHPGPSTGPSTKNENVATLSVS 1468
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 47.8 bits (112), Expect = 2e-05
Identities = 32/87 (36%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 264 PDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAAR 323
P+GVG S G A P +A P P P S G P P PP P A
Sbjct: 649 PEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPP----PPLPGEAGM 704
Query: 324 RPPPPPAPGAPARPLRGRRSHGPAARP 350
PPPPP PG P P GP P
Sbjct: 705 PPPPPPLPGGPGIPPPPPFPGGPGIPP 731
Score = 38.9 bits (89), Expect = 0.007
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPL 338
P P P +P P P P P PP PP PPPP G PA P+
Sbjct: 706 PPPPPLPGGPGIPPPP------PFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPV 753
Score = 38.1 bits (87), Expect = 0.012
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 279 AATTTRPQTTPAAAS--PDLPQPAERSR---GEPRPAEPRAPPRPPPAARRPPPPPAPG 332
AA T P + P+ A P P P + P P + PP PPP PPPPP PG
Sbjct: 558 AAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPP--PPPPPPLPG 614
Score = 37.4 bits (85), Expect = 0.021
Identities = 25/73 (34%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 283 TRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGA-----PARP 337
T P P +P P+ G A P PP P A PPPPP PG+ P P
Sbjct: 641 TIPPPPPLPEGVGIPSPSSLPGGT---AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPP 697
Query: 338 LRGRRSHGPAARP 350
L G P P
Sbjct: 698 LPGEAGMPPPPPP 710
Score = 32.7 bits (73), Expect = 0.53
Identities = 30/95 (31%), Positives = 34/95 (35%), Gaps = 13/95 (13%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLPYEHLADSVE 71
P P+P P P PPPP G C + PP LP P L+
Sbjct: 589 PPPAPGDSTTPPPPPPPPPPPPPLPGGVC-------ISSPPSLPGGTAISPPPPLSGDAT 641
Query: 72 AVLPKALVEGGHLASCHVEWLPGGKL----PRLPG 102
P L EG + S LPGG P LPG
Sbjct: 642 IPPPPPLPEGVGIPS--PSSLPGGTAIPPPPPLPG 674
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 280 ATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPA--ARRPPPPPAPGAPARP 337
+TT P P P LP S P P PP + A PPPPP P P
Sbjct: 596 STTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIP 655
Query: 338 LRGRRSHGPAARP 350
G A P
Sbjct: 656 SPSSLPGGTAIPP 668
Score = 29.6 bits (65), Expect = 4.4
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 294 PDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPG----APARPLRG 340
P P P + + P P P PP P PP PG +P PL G
Sbjct: 588 PPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSG 638
Score = 28.5 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
P P + G+ IPPPPA P +S PPP P P P P
Sbjct: 572 PVPPAPPLPGDSGTIIPPPPA-----------PGDSTTPPPPPPPPPPPPP 611
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 47.8 bits (112), Expect = 2e-05
Identities = 32/87 (36%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 264 PDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAAR 323
P+GVG S G A P +A P P P S G P P PP P A
Sbjct: 658 PEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPP----PPLPGEAGM 713
Query: 324 RPPPPPAPGAPARPLRGRRSHGPAARP 350
PPPPP PG P P GP P
Sbjct: 714 PPPPPPLPGGPGIPPPPPFPGGPGIPP 740
Score = 38.9 bits (89), Expect = 0.007
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPL 338
P P P +P P P P P PP PP PPPP G PA P+
Sbjct: 715 PPPPPLPGGPGIPPPP------PFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPV 762
Score = 38.1 bits (87), Expect = 0.012
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 279 AATTTRPQTTPAAAS--PDLPQPAERSR---GEPRPAEPRAPPRPPPAARRPPPPPAPG 332
AA T P + P+ A P P P + P P + PP PPP PPPPP PG
Sbjct: 567 AAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPP--PPPPPPLPG 623
Score = 37.4 bits (85), Expect = 0.021
Identities = 25/73 (34%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 283 TRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGA-----PARP 337
T P P +P P+ G A P PP P A PPPPP PG+ P P
Sbjct: 650 TIPPPPPLPEGVGIPSPSSLPGGT---AIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPP 706
Query: 338 LRGRRSHGPAARP 350
L G P P
Sbjct: 707 LPGEAGMPPPPPP 719
Score = 32.7 bits (73), Expect = 0.53
Identities = 30/95 (31%), Positives = 34/95 (35%), Gaps = 13/95 (13%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLPYEHLADSVE 71
P P+P P P PPPP G C + PP LP P L+
Sbjct: 598 PPPAPGDSTTPPPPPPPPPPPPPLPGGVC-------ISSPPSLPGGTAISPPPPLSGDAT 650
Query: 72 AVLPKALVEGGHLASCHVEWLPGGKL----PRLPG 102
P L EG + S LPGG P LPG
Sbjct: 651 IPPPPPLPEGVGIPS--PSSLPGGTAIPPPPPLPG 683
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 280 ATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPA--ARRPPPPPAPGAPARP 337
+TT P P P LP S P P PP + A PPPPP P P
Sbjct: 605 STTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIP 664
Query: 338 LRGRRSHGPAARP 350
G A P
Sbjct: 665 SPSSLPGGTAIPP 677
Score = 29.6 bits (65), Expect = 4.4
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 294 PDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPG----APARPLRG 340
P P P + + P P P PP P PP PG +P PL G
Sbjct: 597 PPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSG 647
Score = 28.5 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
P P + G+ IPPPPA P +S PPP P P P P
Sbjct: 581 PVPPAPPLPGDSGTIIPPPPA-----------PGDSTTPPPPPPPPPPPPP 620
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 47.8 bits (112), Expect = 2e-05
Identities = 42/129 (32%), Positives = 47/129 (36%), Gaps = 14/129 (10%)
Query: 239 QQRQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQ 298
+ R+ E L RG QL P VG G++G P +P P
Sbjct: 306 EMRRQEPLPPPPPPSRGGNQLPR--PPIVG---GNKGRSGPLPPVPLGIAPPPPTPRGPP 360
Query: 299 PAERSRGEPRPAEPRA-------PPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPR 351
P RG P P P A PP PP A P PPP P P P G P P
Sbjct: 361 PP--GRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPA 418
Query: 352 AVPTTSLAP 360
VP LAP
Sbjct: 419 LVPAGGLAP 427
Score = 34.3 bits (77), Expect = 0.18
Identities = 37/119 (31%), Positives = 44/119 (36%), Gaps = 20/119 (16%)
Query: 8 GALRPRPSPHGVQ--GEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCPLPYEH 65
G P P+P G G P PPPPA +G P + PP P P P P
Sbjct: 348 GIAPPPPTPRGPPPPGRGGPPPPPPPATGRSG-PLPPPPPGAGGPPMPPPPPPPPPPPSS 406
Query: 66 LADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLV--TRGAHEVHGDPGA 122
LP ALV G LA PG G G L+ R +++ PGA
Sbjct: 407 GNGPAPPPLPPALVPAGGLA---------------PGGGRGALLDQIRQGIQLNKTPGA 450
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 47.8 bits (112), Expect = 2e-05
Identities = 85/303 (28%), Positives = 113/303 (37%), Gaps = 78/303 (25%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 179 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 238
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 239 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 296
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 297 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 356
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG---------RAATTTRPQTT 288
R +++ +G P +G+L G RG G A
Sbjct: 357 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 416
Query: 289 PAAASPDLPQPAERSRGEPRPAEP----RAPPRPPPAARRPPPPPAPGAPARPLRGRRSH 344
P P LP A +G P P R PRPPP PPPPP P P R R
Sbjct: 417 PEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP----PPPPPLPPPPRREPCHRAWP 472
Query: 345 GPA 347
GPA
Sbjct: 473 GPA 475
>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 47.8 bits (112), Expect = 2e-05
Identities = 85/303 (28%), Positives = 113/303 (37%), Gaps = 78/303 (25%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 507 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 566
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 567 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 624
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 625 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 684
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG---------RAATTTRPQTT 288
R +++ +G P +G+L G RG G A
Sbjct: 685 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 744
Query: 289 PAAASPDLPQPAERSRGEPRPAEP----RAPPRPPPAARRPPPPPAPGAPARPLRGRRSH 344
P P LP A +G P P R PRPPP PPPPP P P R R
Sbjct: 745 PEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP----PPPPPLPPPPRREPCHRAWP 800
Query: 345 GPA 347
GPA
Sbjct: 801 GPA 803
>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
sapiens]
Length = 884
Score = 47.8 bits (112), Expect = 2e-05
Identities = 85/303 (28%), Positives = 113/303 (37%), Gaps = 78/303 (25%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 507 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 566
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 567 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 624
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 625 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 684
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG---------RAATTTRPQTT 288
R +++ +G P +G+L G RG G A
Sbjct: 685 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 744
Query: 289 PAAASPDLPQPAERSRGEPRPAEP----RAPPRPPPAARRPPPPPAPGAPARPLRGRRSH 344
P P LP A +G P P R PRPPP PPPPP P P R R
Sbjct: 745 PEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP----PPPPPLPPPPRREPCHRAWP 800
Query: 345 GPA 347
GPA
Sbjct: 801 GPA 803
>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 47.8 bits (112), Expect = 2e-05
Identities = 85/303 (28%), Positives = 113/303 (37%), Gaps = 78/303 (25%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 507 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 566
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 567 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 624
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 625 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 684
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG---------RAATTTRPQTT 288
R +++ +G P +G+L G RG G A
Sbjct: 685 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 744
Query: 289 PAAASPDLPQPAERSRGEPRPAEP----RAPPRPPPAARRPPPPPAPGAPARPLRGRRSH 344
P P LP A +G P P R PRPPP PPPPP P P R R
Sbjct: 745 PEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPP----PPPPPLPPPPRREPCHRAWP 800
Query: 345 GPA 347
GPA
Sbjct: 801 GPA 803
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 47.8 bits (112), Expect = 2e-05
Identities = 31/82 (37%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 285 PQTTPAAAS-PDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRS 343
P +P+ +S P P+P RS A+P PP PPP PPPPP P P PL S
Sbjct: 2377 PSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPP----PPPPPPPPPPPPPLPPPTS 2432
Query: 344 HGPAARPR-----AVPTTSLAP 360
P P+ A P T+ P
Sbjct: 2433 PKPTILPKKKLTVASPVTTATP 2454
Score = 38.9 bits (89), Expect = 0.007
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 282 TTRPQTTPAAASPDLPQPAERSRGEPRPAEP-------RAPPRPPPAARRPPP-PPAPGA 333
T+ QT P LP PA+ +P PA+P PP P + +PPP P P
Sbjct: 459 TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAK 518
Query: 334 PARPLRGRRSHGPAARPRAVPTTSLAP 360
P+ P + + P+ +P + ++ P
Sbjct: 519 PS-PQQPGSTKPPSQQPGSAKPSAQQP 544
Score = 35.8 bits (81), Expect = 0.062
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 22/99 (22%)
Query: 261 EGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRP-- 318
EG P+G+ + G A + PA DL Q +E R + RA P
Sbjct: 10 EGLPEGLAAAAAAGGGASGAGSPSHTAIPAGMEADLSQLSEEERRQIAAVMSRAQGLPKG 69
Query: 319 --PPAARRPPP------------------PPAPGAPARP 337
PPAA P PP PG PA+P
Sbjct: 70 SVPPAAAESPSMHRKQELDSSHPPKQSGRPPDPGRPAQP 108
Score = 33.9 bits (76), Expect = 0.24
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 39/110 (35%)
Query: 283 TRPQTTPA------AASPDLPQPAERSRGEPRPAEPRA-----------PPRPP------ 319
+RPQT A + P LP P++ +P P +P A P +PP
Sbjct: 279 SRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGL 338
Query: 320 --PAARRP----PPPPAPGA---PARPLRGRRSHGPAARPRAVPTTSLAP 360
P A++P PP PG PA+PL GP A+P A T S P
Sbjct: 339 TKPLAQQPGTVKPPVQPPGTTKPPAQPL------GP-AKPPAQQTGSEKP 381
Score = 33.1 bits (74), Expect = 0.40
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 257 QQLVEGAPDGVGHLHGSRGSGRAATTTRPQ--TTPAAASPDLPQPAERSRGEPR-PAEPR 313
QQ G P H G A +P T P A P +P + G + PA+P
Sbjct: 307 QQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPL 366
Query: 314 APPRPP--------PAARRPPPPPAPGAPARPLRGRRSHGPAARP 350
P +PP P++ +P P P + GPA P
Sbjct: 367 GPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPP 411
Score = 32.7 bits (73), Expect = 0.53
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 283 TRPQTTPAAASPDLPQPAERSRGEPRPAEPRA-------PPRPPPAARRPPPPPAPGAPA 335
T P TT +A S PQP + S + A P+ P +PPP ++P +P A A
Sbjct: 663 TAPVTTTSAVSKSSPQPQQTS--PKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKA 720
Query: 336 R 336
+
Sbjct: 721 K 721
Score = 31.6 bits (70), Expect = 1.2
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPA-----RPLR 339
P P + P QP +P + P + P +A+ P+P P+ +P+
Sbjct: 500 PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVS 559
Query: 340 GRRSHGPAARPRAVPTTSLAP 360
S P P P+ P
Sbjct: 560 QTGSGKPLQPPTVSPSAKQPP 580
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
Query: 257 QQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPP 316
Q+ V G G G S+ S +T +P + P + P P++P
Sbjct: 924 QETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSG------PGAPMKQAPAPSQPPTSQ 977
Query: 317 RPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
PP + + PP PA P + + + PAA + P AP
Sbjct: 978 GPPKSTGQAPPAPAKSIPVK----KETKAPAAE-KLEPKAEQAP 1016
Score = 29.6 bits (65), Expect = 4.4
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 285 PQTTPAAASPDLP-QPAERSRGEPRPAE----PRAPPRPPPAARRPPPPPAPGAPARPLR 339
P TT A P P +P + G +P+ P+A +PP + P P P P P +
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKP--PTQ 413
Query: 340 GRRSHGPAARPRAVPTTSLAP 360
+ P A+ + + + AP
Sbjct: 414 QVGTPKPLAQQPGLQSPAKAP 434
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRP---QTTPAAASPDLPQPAERSRGEPRPAEPRA---- 314
G P + G + +A T+ Q P P + S + P +P +
Sbjct: 416 GTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPG 475
Query: 315 PPRPPPAARRP--PPPPAPGAPARP 337
P +PPP P PPP PG+ P
Sbjct: 476 PAKPPPQQPGPAKPPPQQPGSAKPP 500
Score = 28.5 bits (62), Expect = 9.9
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 297 PQPAERSRG-----------EPRPAEPRAPPRP--PPAARRPPPPPAPGAPARPLRGRRS 343
P P+ S+G EP+ A+ + P+P P + P PP P RP G+
Sbjct: 834 PGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGP----RPTAGQTV 889
Query: 344 HGPAARPR 351
P P+
Sbjct: 890 PTPQQSPK 897
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 47.8 bits (112), Expect = 2e-05
Identities = 31/82 (37%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 285 PQTTPAAAS-PDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRS 343
P +P+ +S P P+P RS A+P PP PPP PPPPP P P PL S
Sbjct: 2377 PSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPP----PPPPPPPPPPPPPLPPPTS 2432
Query: 344 HGPAARPR-----AVPTTSLAP 360
P P+ A P T+ P
Sbjct: 2433 PKPTILPKKKLTVASPVTTATP 2454
Score = 38.9 bits (89), Expect = 0.007
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 282 TTRPQTTPAAASPDLPQPAERSRGEPRPAEP-------RAPPRPPPAARRPPP-PPAPGA 333
T+ QT P LP PA+ +P PA+P PP P + +PPP P P
Sbjct: 459 TSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAK 518
Query: 334 PARPLRGRRSHGPAARPRAVPTTSLAP 360
P+ P + + P+ +P + ++ P
Sbjct: 519 PS-PQQPGSTKPPSQQPGSAKPSAQQP 544
Score = 35.8 bits (81), Expect = 0.062
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 22/99 (22%)
Query: 261 EGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRP-- 318
EG P+G+ + G A + PA DL Q +E R + RA P
Sbjct: 10 EGLPEGLAAAAAAGGGASGAGSPSHTAIPAGMEADLSQLSEEERRQIAAVMSRAQGLPKG 69
Query: 319 --PPAARRPPP------------------PPAPGAPARP 337
PPAA P PP PG PA+P
Sbjct: 70 SVPPAAAESPSMHRKQELDSSHPPKQSGRPPDPGRPAQP 108
Score = 33.9 bits (76), Expect = 0.24
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 39/110 (35%)
Query: 283 TRPQTTPA------AASPDLPQPAERSRGEPRPAEPRA-----------PPRPP------ 319
+RPQT A + P LP P++ +P P +P A P +PP
Sbjct: 279 SRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGL 338
Query: 320 --PAARRP----PPPPAPGA---PARPLRGRRSHGPAARPRAVPTTSLAP 360
P A++P PP PG PA+PL GP A+P A T S P
Sbjct: 339 TKPLAQQPGTVKPPVQPPGTTKPPAQPL------GP-AKPPAQQTGSEKP 381
Score = 33.1 bits (74), Expect = 0.40
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 257 QQLVEGAPDGVGHLHGSRGSGRAATTTRPQ--TTPAAASPDLPQPAERSRGEPR-PAEPR 313
QQ G P H G A +P T P A P +P + G + PA+P
Sbjct: 307 QQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPL 366
Query: 314 APPRPP--------PAARRPPPPPAPGAPARPLRGRRSHGPAARP 350
P +PP P++ +P P P + GPA P
Sbjct: 367 GPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPP 411
Score = 32.7 bits (73), Expect = 0.53
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 283 TRPQTTPAAASPDLPQPAERSRGEPRPAEPRA-------PPRPPPAARRPPPPPAPGAPA 335
T P TT +A S PQP + S + A P+ P +PPP ++P +P A A
Sbjct: 663 TAPVTTTSAVSKSSPQPQQTS--PKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKA 720
Query: 336 R 336
+
Sbjct: 721 K 721
Score = 31.6 bits (70), Expect = 1.2
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPA-----RPLR 339
P P + P QP +P + P + P +A+ P+P P+ +P+
Sbjct: 500 PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVS 559
Query: 340 GRRSHGPAARPRAVPTTSLAP 360
S P P P+ P
Sbjct: 560 QTGSGKPLQPPTVSPSAKQPP 580
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
Query: 257 QQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPP 316
Q+ V G G G S+ S +T +P + P + P P++P
Sbjct: 924 QETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSG------PGAPMKQAPAPSQPPTSQ 977
Query: 317 RPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
PP + + PP PA P + + + PAA + P AP
Sbjct: 978 GPPKSTGQAPPAPAKSIPVK----KETKAPAAE-KLEPKAEQAP 1016
Score = 29.6 bits (65), Expect = 4.4
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 285 PQTTPAAASPDLP-QPAERSRGEPRPAE----PRAPPRPPPAARRPPPPPAPGAPARPLR 339
P TT A P P +P + G +P+ P+A +PP + P P P P P +
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKP--PTQ 413
Query: 340 GRRSHGPAARPRAVPTTSLAP 360
+ P A+ + + + AP
Sbjct: 414 QVGTPKPLAQQPGLQSPAKAP 434
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRP---QTTPAAASPDLPQPAERSRGEPRPAEPRA---- 314
G P + G + +A T+ Q P P + S + P +P +
Sbjct: 416 GTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPG 475
Query: 315 PPRPPPAARRP--PPPPAPGAPARP 337
P +PPP P PPP PG+ P
Sbjct: 476 PAKPPPQQPGPAKPPPQQPGSAKPP 500
Score = 28.5 bits (62), Expect = 9.9
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 17/68 (25%)
Query: 297 PQPAERSRG-----------EPRPAEPRAPPRP--PPAARRPPPPPAPGAPARPLRGRRS 343
P P+ S+G EP+ A+ + P+P P + P PP P RP G+
Sbjct: 834 PGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGP----RPTAGQTV 889
Query: 344 HGPAARPR 351
P P+
Sbjct: 890 PTPQQSPK 897
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 47.4 bits (111), Expect = 2e-05
Identities = 36/110 (32%), Positives = 40/110 (36%), Gaps = 8/110 (7%)
Query: 256 QQQLVEGAPDGVGHLH-GSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRA 314
Q QL P G+GH H G GSG P P P + P RG P +
Sbjct: 308 QMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPP---RGPPFGSPMGH 364
Query: 315 PPRPPPAARRPPPPPAP----GAPARPLRGRRSHGPAARPRAVPTTSLAP 360
P PP R PPP P P RP GP PR P + P
Sbjct: 365 PGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPP 414
Score = 36.2 bits (82), Expect = 0.047
Identities = 34/100 (34%), Positives = 34/100 (34%), Gaps = 23/100 (23%)
Query: 265 DGVGHLHGSRGSGRAATTT------RPQTTPAAASP--DLPQPAERSRGEPRPAEPRAPP 316
D G HGS A RP A A P P P S G P PP
Sbjct: 181 DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLP-----PP 235
Query: 317 RPPPAARRPPPPPAPGA------PARP----LRGRRSHGP 346
PP PPP P PGA PA P G HGP
Sbjct: 236 GMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGP 275
Score = 33.1 bits (74), Expect = 0.40
Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 264 PDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAAR 323
P + S GSG P P + P +P P G P PA P PP PP AA
Sbjct: 218 PSAPNPVVSSLGSGLPPPGMPP---PGSFPPPVPPPGALPPGIP-PAMP-PPPMPPGAAG 272
Query: 324 RPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAPFTL 363
PP P G SH P +P ++ L
Sbjct: 273 HGPPSAGTPGAGHPGHG-HSHPHPFPPGGMPHPGMSQMQL 311
Score = 32.3 bits (72), Expect = 0.69
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCG----ATPHNSLIPPPLLPHY-----PCPLP 62
PRP P G+ P P+ PP G+ G PH PPPL+P + P P P
Sbjct: 335 PRPPP-GMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPP 393
Query: 63 Y 63
Y
Sbjct: 394 Y 394
Score = 31.2 bits (69), Expect = 1.5
Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
Query: 294 PDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRRSHGPAARPRAV 353
P +P P S P P PP PPA PP PP P G G +
Sbjct: 235 PGMPPPG--SFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSH 292
Query: 354 PTTSLAPFTLGG 365
P PF GG
Sbjct: 293 P----HPFPPGG 300
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 47.0 bits (110), Expect = 3e-05
Identities = 28/67 (41%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 284 RPQTTPAAASPDLPQPAERSRG-EPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRR 342
R P+ P LP P RSR R P PPR P + PPPPP P AP L R
Sbjct: 29 RSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAP-HVLGARV 87
Query: 343 SHGPAAR 349
+ GP R
Sbjct: 88 AAGPTHR 94
Score = 29.3 bits (64), Expect = 5.8
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 289 PAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAA----RRPPPPPAPGAPARPLR 339
P P P R+ R A P +P A PPPPP A +R LR
Sbjct: 107 PVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPPSRARSRSLR 161
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 47.0 bits (110), Expect = 3e-05
Identities = 28/67 (41%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 284 RPQTTPAAASPDLPQPAERSRG-EPRPAEPRAPPRPPPAARRPPPPPAPGAPARPLRGRR 342
R P+ P LP P RSR R P PPR P + PPPPP P AP L R
Sbjct: 29 RSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAP-HVLGARV 87
Query: 343 SHGPAAR 349
+ GP R
Sbjct: 88 AAGPTHR 94
Score = 29.3 bits (64), Expect = 5.8
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 289 PAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAA----RRPPPPPAPGAPARPLR 339
P P P R+ R A P +P A PPPPP A +R LR
Sbjct: 107 PVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPPSRARSRSLR 161
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 47.0 bits (110), Expect = 3e-05
Identities = 34/81 (41%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 279 AATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPL 338
AA T QT P + P PA P+ P AP PAA PPPPPAP ARP
Sbjct: 232 AAPGTVIQTPPFVGAAAPPAPAA-------PSPPAAPAPAAPAAAPPPPPPAPATLARP- 283
Query: 339 RGRRSHGPAARPRAVPTTSLA 359
G + P A P AVP + A
Sbjct: 284 PGHPAGPPTAAP-AVPPPAAA 303
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/144 (29%), Positives = 48/144 (33%), Gaps = 40/144 (27%)
Query: 250 HQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDL---PQPAERSR-- 304
H H + V A G H GS A P PA +P P PA R+R
Sbjct: 40 HHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGP-AAPAEGAPGAAPEPPPAGRARPG 98
Query: 305 -------GEPRPAEPRAPPRP-PPAARRPPPP---------------------PAPGAPA 335
G P P P P P PPAA+ PPP PAP PA
Sbjct: 99 GGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPA 158
Query: 336 RP-----LRGRRSHGPAARPRAVP 354
+P L R GP P P
Sbjct: 159 KPAGPAALAARAGPGPGPGPGPGP 182
Score = 38.9 bits (89), Expect = 0.007
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEP--RAPPRPPPAARR--------PPPPPAPGAP 334
P AA P P PA +R PA P AP PPPAA + P P PA G P
Sbjct: 263 PAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP 322
Query: 335 ARPLRGRRSHGPAARPRAVPTTSLAP 360
A + G+ G AA A + +P
Sbjct: 323 A-GVSGQPGPGAAAAAPAPGVKAESP 347
Score = 37.7 bits (86), Expect = 0.016
Identities = 27/60 (45%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 305 GEPRPAE--PRAPPRPPPAAR-RP----PPPPAPGAPARPLRGRRSHGPAARPRAVPTTS 357
G PAE P A P PPPA R RP P P P +P RPL PAA+ R P S
Sbjct: 74 GPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGS 133
Score = 36.6 bits (83), Expect = 0.036
Identities = 37/110 (33%), Positives = 39/110 (35%), Gaps = 18/110 (16%)
Query: 262 GAPDGVGHLHGSRGSGR--------AATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPR 313
G P G G GS A + PAA P LP+PA P
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLP-LPKPAAPGTVIQTPPFVG 245
Query: 314 APPRPPPAARRPPPPPAPGAPA--------RPLRGRRSHG-PAARPRAVP 354
A P PAA PP PAP APA P R G PA P A P
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP 295
Score = 36.2 bits (82), Expect = 0.047
Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Query: 307 PRPAEPRAPPRPPP--AARRPPPPPAPGAPARPLRGRRSHGPAARPRAVPTTSLAPFTL 363
P+PA P + PP A PP P AP PA P PAA A P AP TL
Sbjct: 229 PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP-------APAAPAAAPPPPPPAPATL 280
Score = 35.4 bits (80), Expect = 0.081
Identities = 31/95 (32%), Positives = 36/95 (37%), Gaps = 15/95 (15%)
Query: 279 AATTTRPQTTPAAASPDLPQPAERSRG-EPRPAEPRAPPRPPPAARR----------PPP 327
AA P A + +P A + G EP PA P P P A R P P
Sbjct: 123 AAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGP 182
Query: 328 PPAPGAPARPLRGRRSHGPAA----RPRAVPTTSL 358
P PG PA P + +G AA A P SL
Sbjct: 183 GPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSL 217
Score = 34.3 bits (77), Expect = 0.18
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 280 ATTTRPQTTPAA---ASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRP---PPPPAPG- 332
AT RP PA A+P +P PA G A P P PAA P P PG
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQNG----GSAGAAPAPAPAAGGPAGVSGQPGPGA 333
Query: 333 APARPLRGRRSHGPAARPRAVP 354
A A P G ++ P +A P
Sbjct: 334 AAAAPAPGVKAESPKRVVQAAP 355
Score = 32.3 bits (72), Expect = 0.69
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 13 RPSPHGVQGEKPAPIPPPPAQESNGASCGATP 44
RP H AP PPPA NG S GA P
Sbjct: 282 RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAP 313
Score = 30.4 bits (67), Expect = 2.6
Identities = 26/77 (33%), Positives = 28/77 (36%), Gaps = 12/77 (15%)
Query: 279 AATTTRPQTTPAAASPDLPQPAERSRGEPRPAE----PRAPPRPPPAARRPPPPPAP--- 331
A P PA A+P P P PA P P PP AA PPP A
Sbjct: 251 APAAPSPPAAPAPAAPAAAPPPP----PPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG 306
Query: 332 -GAPARPLRGRRSHGPA 347
A A P + GPA
Sbjct: 307 GSAGAAPAPAPAAGGPA 323
Score = 28.9 bits (63), Expect = 7.6
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 274 RGSGRAATTTRPQTTPAAASPDLP-QPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPG 332
R +G+ A T P S P Q +G+P P + PP+P RPP
Sbjct: 704 RTAGKTAATVTSALQPPVLSLTQPTQVGVGKQGQPTPLVIQQPPKPGALI-RPPQVTLTQ 762
Query: 333 APARPLRGRRSHGPAARPRAVPTTSLAP 360
P LR + P+ + L P
Sbjct: 763 TPMVALRQPHNRIMLTTPQQIQLNPLQP 790
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,124,631
Number of Sequences: 37866
Number of extensions: 1559979
Number of successful extensions: 45840
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 1565
Number of HSP's that attempted gapping in prelim test: 15694
Number of HSP's gapped (non-prelim): 17981
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.