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Search of human proteins with 239749949
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749949 PREDICTED: hypothetical protein [Homo sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749949 PREDICTED: hypothetical protein [Homo sapiens] 378 e-105
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 42 4e-04
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 36 0.021
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 35 0.036
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 34 0.061
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 33 0.14
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens] 33 0.14
gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens] 33 0.14
gi|153791350 replication initiator 1 isoform 1 [Homo sapiens] 32 0.23
gi|153792539 replication initiator 1 isoform 1 [Homo sapiens] 32 0.23
gi|153792647 replication initiator 1 isoform 3 [Homo sapiens] 32 0.23
gi|153791994 replication initiator 1 isoform 1 [Homo sapiens] 32 0.23
gi|226437602 NK1 homeobox 2 [Homo sapiens] 32 0.30
gi|239757595 PREDICTED: hypothetical protein [Homo sapiens] 32 0.30
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 32 0.30
gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo ... 32 0.30
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 32 0.30
gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo ... 32 0.30
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 32 0.30
gi|32171215 CREB regulated transcription coactivator 2 [Homo sap... 32 0.39
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 32 0.39
gi|56788370 pleckstrin and Sec7 domain containing 4 [Homo sapiens] 32 0.39
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 31 0.51
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 31 0.51
gi|239745220 PREDICTED: hypothetical protein [Homo sapiens] 31 0.51
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 31 0.51
gi|238859557 regulatory factor X1 [Homo sapiens] 31 0.67
gi|62953127 polyhomeotic 1-like [Homo sapiens] 31 0.67
gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens] 31 0.67
gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens] 31 0.67
>gi|239749949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 378 bits (971), Expect = e-105
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MVSRQPALARPQVVPGMQRTGRRQDPRCQRPSPAQIRFWGSHFFQAQLREGCSVHTHLPL 60
MVSRQPALARPQVVPGMQRTGRRQDPRCQRPSPAQIRFWGSHFFQAQLREGCSVHTHLPL
Sbjct: 1 MVSRQPALARPQVVPGMQRTGRRQDPRCQRPSPAQIRFWGSHFFQAQLREGCSVHTHLPL 60
Query: 61 QLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPA 120
QLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPA
Sbjct: 61 QLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPA 120
Query: 121 FALHTAGAQQSLPLLMDNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
FALHTAGAQQSLPLLMDNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR
Sbjct: 121 FALHTAGAQQSLPLLMDNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
Query: 181 RP 182
RP
Sbjct: 181 RP 182
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 41.6 bits (96), Expect = 4e-04
Identities = 45/167 (26%), Positives = 61/167 (36%), Gaps = 41/167 (24%)
Query: 15 PGMQRTGRRQDPRCQRPSPAQIR---FWGSHFFQAQLREGCS------------VHTHLP 59
PG Q G R+ P +RP+P R GS + R GC + H P
Sbjct: 40 PGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGCRPRRPHPAARCLPLRPHRP 99
Query: 60 LQLNQ--------------APREAPKQLWELQEGG--------EERAGSGGGRSCPGVPR 97
+ ++ APR AP + L G +R G GGRS PG P
Sbjct: 100 TRRHRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGGRSHPGGPG 159
Query: 98 V----GVQAPGDAGDSRSSLALPGWPAFALHTAGAQQSLPLLMDNSI 140
G PGD G + + P A T GA + PL ++ +
Sbjct: 160 SPRGGGTVGPGDRGPAAADGGRPQRTVRAAETRGAAAAPPLTLEGPV 206
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 35.8 bits (81), Expect = 0.021
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 19 RTGRRQDPRCQRPSPAQIRFWGSHFFQAQLREGCSVHTHLPLQLNQAPREAPKQLWELQE 78
R R R Q P + FF + R+ H P ++ +AP+Q W QE
Sbjct: 92 RAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQ-PFPQLRSHWQAPRQGWPAQE 150
Query: 79 GGEER---------AGSGGGRSCPGV-PRVGVQAPGDAGD 108
GG R GG R+ PG+ R G A G GD
Sbjct: 151 GGGRRPSRREEAAALAGGGKRTAPGLRGRGGRAAAGQGGD 190
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 35.0 bits (79), Expect = 0.036
Identities = 48/179 (26%), Positives = 62/179 (34%), Gaps = 16/179 (8%)
Query: 8 LARPQVVPGMQRTGRRQDPRCQRPSPAQIRFWGSHFFQAQLREGCSVHTHLPLQLNQAPR 67
+A P VPG G PA +HF L + SV P +
Sbjct: 647 VAVPGPVPGQHPCGEEATQL-----PAAFTSEATHFKPIVLAQNASVARDQPALAQEESE 701
Query: 68 EAPKQLWELQEG-GEERAGSGGGRSCPGV--PRVGVQAPGDAGDSRSSLALPGWPAFALH 124
E Q +EG GEE+ P + P V PG G + L G
Sbjct: 702 ERGGQ----REGEGEEKLSLEAHAGSPSLKTPDGPVPGPGPQGAAPEPL---GASVQRDS 754
Query: 125 TAGAQQSLPLLMDNSIAHSSISVPQETVPSWPRPVPSVAIE-GPARPAVTGGASAGRRP 182
G P N +S + P VP+ P ++ +E GPA P G AS G RP
Sbjct: 755 AQGRPCPPPQAPANQPEGASSAAPGSPVPAPPTKASALPVEQGPAEPIPPGVASGGLRP 813
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 34.3 bits (77), Expect = 0.061
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 11/100 (11%)
Query: 19 RTGRRQDPRCQRPSPAQIRFWGSHFFQAQLREGCSVHTHLPLQLNQAPREAPKQLWELQE 78
R R R Q P + FF + R+ H P ++ +AP+Q W QE
Sbjct: 92 RAARTHRARAQTPQLRREAACAGSFFFRKCRQSPRSHGQ-PFPQLRSHWQAPRQGWPAQE 150
Query: 79 GGEER---------AGSGGGRSCPG-VPRVGVQAPGDAGD 108
GG R GG R+ PG R G A G GD
Sbjct: 151 GGGRRPSRREEAAALAGGGKRTAPGRRGRGGRAAAGQGGD 190
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 33.1 bits (74), Expect = 0.14
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGRR 181
SS+ P+ TVP P PS + E P P T A+ GR+
Sbjct: 1358 SSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATRGRK 1396
Score = 31.2 bits (69), Expect = 0.51
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
SS+ P+ VP+ P PS + + P P T A+ GR
Sbjct: 1440 SSVKTPETVVPTAPELQPSTSTDQPVTPEPTSQATRGR 1477
Score = 31.2 bits (69), Expect = 0.51
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
SS+ P+ VP+ P PS + + P P T A+ GR
Sbjct: 1522 SSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATRGR 1559
Score = 30.8 bits (68), Expect = 0.67
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGAS 177
SS+ P+ VP+ P P P+ + + P P +T A+
Sbjct: 1604 SSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSRAT 1638
Score = 28.9 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
SS P+ VP+ P+ PS + + P P T A+ GR
Sbjct: 1399 SSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGR 1436
Score = 27.7 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGRR 181
SS+ P+ VP+ P PS + + P T A+ GR+
Sbjct: 1235 SSVKTPEPVVPTAPELQPSTSTDQPVTSEPTYQATRGRK 1273
Score = 27.3 bits (59), Expect = 7.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGRR 181
SS+ P+ VP+ P PS + + P T + GR+
Sbjct: 1153 SSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRK 1191
Score = 26.9 bits (58), Expect = 9.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 143 SSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
SS+ P+ VP+ P PS + + P P T + R
Sbjct: 1276 SSVKTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSR 1313
>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 33.1 bits (74), Expect = 0.14
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 87 GGGRSCPGVPRVGVQAPGDA---GDSRSSLALPGWPAFALHTAGAQQSLPLLMDNSIAHS 143
G GR C P GD+ G R + PG P + A QQ P S
Sbjct: 24 GAGRRCRAWPERAWPQAGDSDCLGQGRRAQRRPG-PGVSAVGASGQQRAP--------ES 74
Query: 144 SISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
+ +E P+ P+PS A GP PA+ +SA R
Sbjct: 75 NERPAEEPTPA---PMPSSAPRGPTEPALRRPSSADR 108
>gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 364
Score = 33.1 bits (74), Expect = 0.14
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 87 GGGRSCPGVPRVGVQAPGDA---GDSRSSLALPGWPAFALHTAGAQQSLPLLMDNSIAHS 143
G GR C P GD+ G R + PG P + A QQ P S
Sbjct: 127 GAGRRCRAWPERAWPQAGDSDCLGQGRRAQRRPG-PGVSAVGASGQQRAP--------ES 177
Query: 144 SISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGR 180
+ +E P+ P+PS A GP PA+ +SA R
Sbjct: 178 NERPAEEPTPA---PMPSSAPRGPTEPALRRPSSADR 211
>gi|153791350 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 32.3 bits (72), Expect = 0.23
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 59 PLQLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGD-SRSSLALPG 117
P L+ +E+P+ L + G ++ S V + G QAPG A + PG
Sbjct: 17 PRLLSGPSQESPQTLGKESRGLRQQGTS--------VAQSGAQAPGRAHRCAHCRRHFPG 68
Query: 118 WPAFALHTAGAQQSLPL 134
W A LHT Q LPL
Sbjct: 69 WVALWLHTRRCQARLPL 85
>gi|153792539 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 32.3 bits (72), Expect = 0.23
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 59 PLQLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGD-SRSSLALPG 117
P L+ +E+P+ L + G ++ S V + G QAPG A + PG
Sbjct: 17 PRLLSGPSQESPQTLGKESRGLRQQGTS--------VAQSGAQAPGRAHRCAHCRRHFPG 68
Query: 118 WPAFALHTAGAQQSLPL 134
W A LHT Q LPL
Sbjct: 69 WVALWLHTRRCQARLPL 85
>gi|153792647 replication initiator 1 isoform 3 [Homo sapiens]
Length = 624
Score = 32.3 bits (72), Expect = 0.23
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 59 PLQLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGD-SRSSLALPG 117
P L+ +E+P+ L + G ++ S V + G QAPG A + PG
Sbjct: 74 PRLLSGPSQESPQTLGKESRGLRQQGTS--------VAQSGAQAPGRAHRCAHCRRHFPG 125
Query: 118 WPAFALHTAGAQQSLPL 134
W A LHT Q LPL
Sbjct: 126 WVALWLHTRRCQARLPL 142
>gi|153791994 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 32.3 bits (72), Expect = 0.23
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 59 PLQLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGD-SRSSLALPG 117
P L+ +E+P+ L + G ++ S V + G QAPG A + PG
Sbjct: 17 PRLLSGPSQESPQTLGKESRGLRQQGTS--------VAQSGAQAPGRAHRCAHCRRHFPG 68
Query: 118 WPAFALHTAGAQQSLPL 134
W A LHT Q LPL
Sbjct: 69 WVALWLHTRRCQARLPL 85
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 32.0 bits (71), Expect = 0.30
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 11 PQVVPGMQRTGRRQ-DPRCQRPSPAQIRFWGSHFFQAQLR----EGCSVHTHLPLQLNQA 65
P PG R RR+ +P C +P A+ F + + SV L L L+ +
Sbjct: 142 PPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLS 201
Query: 66 PREAPKQLW--------ELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPG 117
E ++W + Q G + A GG G P+ G G G S S PG
Sbjct: 202 LTETQVKIWFQNRRTKWKKQNPGADGAAQVGG----GAPQPGAAGGGGGGGSGGSPGPPG 257
Query: 118 WPAFALHT 125
A T
Sbjct: 258 TGALHFQT 265
>gi|239757595 PREDICTED: hypothetical protein [Homo sapiens]
Length = 612
Score = 32.0 bits (71), Expect = 0.30
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 113 LALPGWPAFALHTAGAQQSLPLLM-DNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPA 171
+A+PG P + L +PLL + S+A P TV P V +VA E + +
Sbjct: 195 MAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKAS 254
Query: 172 VTGGA 176
GG+
Sbjct: 255 SLGGS 259
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 32.0 bits (71), Expect = 0.30
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 11 PQVVPGMQRTGRRQ-DPRCQRPSPAQIRFWGSHFFQAQLR----EGCSVHTHLPLQLNQA 65
P PG R RR+ +P C +P A+ F + + SV L L L+ +
Sbjct: 164 PPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLS 223
Query: 66 PREAPKQLW--------ELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPG 117
E ++W + Q G + A GG G P+ G G G S S PG
Sbjct: 224 LTETQVKIWFQNRRTKWKKQNPGADGAAQVGG----GAPQPGAAGGGGGGGSGGSPGPPG 279
Query: 118 WPAFALHT 125
A T
Sbjct: 280 TGALHFQT 287
>gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo
sapiens]
Length = 413
Score = 32.0 bits (71), Expect = 0.30
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 113 LALPGWPAFALHTAGAQQSLPLLM-DNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPA 171
+A+PG P + L +PLL + S+A P TV P V +VA E + +
Sbjct: 106 MAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKAS 165
Query: 172 VTGGA 176
GG+
Sbjct: 166 SLGGS 170
>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 32.0 bits (71), Expect = 0.30
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 11 PQVVPGMQRTGRRQ-DPRCQRPSPAQIRFWGSHFFQAQLR----EGCSVHTHLPLQLNQA 65
P PG R RR+ +P C +P A+ F + + SV L L L+ +
Sbjct: 164 PPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLS 223
Query: 66 PREAPKQLW--------ELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPG 117
E ++W + Q G + A GG G P+ G G G S S PG
Sbjct: 224 LTETQVKIWFQNRRTKWKKQNPGADGAAQVGG----GAPQPGAAGGGGGGGSGGSPGPPG 279
Query: 118 WPAFALHT 125
A T
Sbjct: 280 TGALHFQT 287
>gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo
sapiens]
Length = 413
Score = 32.0 bits (71), Expect = 0.30
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 113 LALPGWPAFALHTAGAQQSLPLLM-DNSIAHSSISVPQETVPSWPRPVPSVAIEGPARPA 171
+A+PG P + L +PLL + S+A P TV P V +VA E + +
Sbjct: 106 MAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKAS 165
Query: 172 VTGGA 176
GG+
Sbjct: 166 SLGGS 170
>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 32.0 bits (71), Expect = 0.30
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 11 PQVVPGMQRTGRRQ-DPRCQRPSPAQIRFWGSHFFQAQLR----EGCSVHTHLPLQLNQA 65
P PG R RR+ +P C +P A+ F + + SV L L L+ +
Sbjct: 164 PPGSPGSPRPRRRRLEPNCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLS 223
Query: 66 PREAPKQLW--------ELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPG 117
E ++W + Q G + A GG G P+ G G G S S PG
Sbjct: 224 LTETQVKIWFQNRRTKWKKQNPGADGAAQVGG----GAPQPGAAGGGGGGGSGGSPGPPG 279
Query: 118 WPAFALHT 125
A T
Sbjct: 280 TGALHFQT 287
>gi|32171215 CREB regulated transcription coactivator 2 [Homo
sapiens]
Length = 693
Score = 31.6 bits (70), Expect = 0.39
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 13/102 (12%)
Query: 93 PGVPRVGVQAPGDAGDSRSSLALPGW------PAFALHTAGAQQSLP-------LLMDNS 139
PG G+ +P +SSL+ P P L + + SLP +L S
Sbjct: 327 PGYDAPGLHSPLSHPSLQSSLSNPNLQASLSSPQPQLQGSHSHPSLPASSLARHVLPTTS 386
Query: 140 IAHSSISVPQETVPSWPRPVPSVAIEGPARPAVTGGASAGRR 181
+ H S+S P + S S + P+ PA T GAS R
Sbjct: 387 LGHPSLSAPALSSSSSSSSTSSPVLGAPSYPASTPGASPHHR 428
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 31.6 bits (70), Expect = 0.39
Identities = 28/94 (29%), Positives = 34/94 (36%), Gaps = 13/94 (13%)
Query: 85 GSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPAFALHTAGAQQSLPLLMDNSIAHSS 144
GSGG SCP VG G G S ++ A P P A A A A ++
Sbjct: 5 GSGGRASCPPGVGVGPGTGGSPGPSANAAATPA-PGNAAAAAAA------------AAAA 51
Query: 145 ISVPQETVPSWPRPVPSVAIEGPARPAVTGGASA 178
+ P T P+ P P G R G A
Sbjct: 52 AAAPGPTPPAPPGPGTDAQAAGAERAEEAAGPGA 85
>gi|56788370 pleckstrin and Sec7 domain containing 4 [Homo sapiens]
Length = 1056
Score = 31.6 bits (70), Expect = 0.39
Identities = 37/126 (29%), Positives = 42/126 (33%), Gaps = 14/126 (11%)
Query: 49 REGCSVHTHLPLQLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGD 108
REG LP L P +P E E G G P Q
Sbjct: 419 REGGHPQESLPCTLAPCPWRSPASSPEPSSPESESRGPG-----PRPSPASSQEGSPQLQ 473
Query: 109 SRSSLALPGWPAFALHTAGAQQSLPLLMDNSIAHSSISVPQETVPSWPRPVPSVAIEGPA 168
SS LP W T A QS L D S+ ++ P+P V EG A
Sbjct: 474 HHSSGILPKW------TLDASQSSLLETDGE---QPSSLKKKEAGEAPKPGEEVKSEGTA 524
Query: 169 RPAVTG 174
RPA TG
Sbjct: 525 RPAETG 530
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 31.2 bits (69), Expect = 0.51
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 68 EAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPAFALHTAG 127
EA Q +EG +E S G P + +P G R +L L AG
Sbjct: 98 EAGHQERPEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAG 157
Query: 128 AQQSLP---------LLMDNSIAHSSISV-------PQETVPSWPRPVPSVAIEGPARPA 171
A++ L L+ H ++S+ P+ P P P A P RP+
Sbjct: 158 ARRRLSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPS 217
Query: 172 VTG 174
G
Sbjct: 218 TAG 220
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 31.2 bits (69), Expect = 0.51
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 68 EAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPAFALHTAG 127
EA Q +EG +E S G P + +P G R +L L AG
Sbjct: 98 EAGHQERPEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAG 157
Query: 128 AQQSLP---------LLMDNSIAHSSISV-------PQETVPSWPRPVPSVAIEGPARPA 171
A++ L L+ H ++S+ P+ P P P A P RP+
Sbjct: 158 ARRRLSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPS 217
Query: 172 VTG 174
G
Sbjct: 218 TAG 220
>gi|239745220 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 31.2 bits (69), Expect = 0.51
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 16/123 (13%)
Query: 68 EAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPAFALHTAG 127
EA Q +EG +E S G P + +P G R +L L AG
Sbjct: 98 EAGHQERPEEEGEDEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAG 157
Query: 128 AQQSLP---------LLMDNSIAHSSISV-------PQETVPSWPRPVPSVAIEGPARPA 171
A++ L L+ H ++S+ P+ P P P A P RP+
Sbjct: 158 ARRRLSEGKLVSRPRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPS 217
Query: 172 VTG 174
G
Sbjct: 218 TAG 220
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 31.2 bits (69), Expect = 0.51
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 22/102 (21%)
Query: 66 PREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPAFALHT 125
PR P Q ++ +G+G G SC P R SLA P F+
Sbjct: 57 PRHTPDQSPGMESRHRSPSGAGEGASCSDGP-------------RGSLACPSPTCFSPQE 103
Query: 126 AGAQQSLPLLMDNSIAH-SSIS-VPQETVPSWPRPVPSVAIE 165
+ ++++L AH +SIS P+ T P PV SV E
Sbjct: 104 SPSKETLE-------AHGASISGTPEATTSGKPEPVSSVKTE 138
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 30.8 bits (68), Expect = 0.67
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Query: 59 PLQLN--QAPREA-PKQLWELQEGGEERAGSGGGRSCPGVPRVGV---QAPGDAGDSRSS 112
PLQL Q P++A P Q +Q G + G +V Q+P A S S
Sbjct: 160 PLQLTNIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSK 219
Query: 113 LA--LPGWPAFALHTAGAQQSLPLLMDNSIAHSSISVPQETVPSWPRPVPSVAIEG 166
A G L G QQS+P+ + S+ ++ P+ P PV + ++G
Sbjct: 220 TAGAPTGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPK------PGPVQPLTVQG 269
>gi|62953127 polyhomeotic 1-like [Homo sapiens]
Length = 1004
Score = 30.8 bits (68), Expect = 0.67
Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 26/143 (18%)
Query: 42 HFFQAQLREGCSVHTHLPLQLNQAPREAPKQLWELQEGGEERAGSGGGRSCPGVPRVGVQ 101
H Q Q R+ +HT LQL Q ++ +Q + Q+ +A + P VP
Sbjct: 403 HQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQ---PQATTLTAPQPPQVPPTQQV 459
Query: 102 APGDAGDSRSSLALPGWPAFALHTAGAQQSLPLLMDNSIAHSSISVPQETVPSWPRPVPS 161
P + QQ+ L++ + S +S+P + P P P+ S
Sbjct: 460 PPSQS---------------------QQQAQTLVVQPMLQSSPLSLPPDAAPKPPIPIQS 498
Query: 162 VAIEGPARPAVTGGA--SAGRRP 182
P +P G A SA ++P
Sbjct: 499 KPPVAPIKPPQLGAAKMSAAQQP 521
>gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]
Length = 1585
Score = 30.8 bits (68), Expect = 0.67
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 82 ERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLALPGWPA 120
E G GR+C G + G PG+AG ++ PG PA
Sbjct: 206 EECGRAAGRAC-GFAQPGCSCPGEAGAGSTTTTSPGPPA 243
>gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens]
Length = 552
Score = 30.8 bits (68), Expect = 0.67
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 75 ELQEGGEERAGSGGGRSCPGVPRVGVQAPGDAGDSRSSLA 114
E GG + G GGGR PG PR PG + SS+A
Sbjct: 121 EEPRGGGDSGGGGGGRPNPGPPRAA--GPGGGSLASSSVA 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,101,420
Number of Sequences: 37866
Number of extensions: 499305
Number of successful extensions: 2482
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 2411
Number of HSP's gapped (non-prelim): 190
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.