Guide to the Human Genome
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Name: PNO1 Sequence: fasta or formatted (252aa) NCBI GI: 10047140
Description:

partner of NOB1

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         24           2
 C cysteine            1.2          3           1
 D aspartate           4.8         12           2
 E glutamate           7.5         19           2
 F phenylalanine       4.8         12           1
 G glycine             7.9         20           2
 H histidine           1.2          3           1
 I isoleucine          6.7         17           1
 K lysine              8.3         21           2
 L leucine             8.3         21           2
 M methionine          2.0          5           1
 N asparagine          3.6          9           1
 P proline             4.4         11           2
 Q glutamine           2.8          7           1
 R arginine            8.7         22           2
 S serine              4.8         12           1
 T threonine           6.3         16           1
 V valine              6.0         15           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   partner of NOB1 
KRR1                  0.034   HIV-1 rev binding protein 2 
IGF2BP1               0.019   insulin-like growth factor 2 mRNA binding protein 1...
IGF2BP1               0.019   insulin-like growth factor 2 mRNA binding protein 1 ...
LOC728767             0.015   PREDICTED: hypothetical protein 
LOC728767             0.015   PREDICTED: hypothetical protein 
FSD1                  0.013   fibronectin type III and SPRY domain containing 1 [H...
IGF2BP2               0.013   insulin-like growth factor 2 mRNA binding protein 2 ...
IGF2BP2               0.013   insulin-like growth factor 2 mRNA binding protein 2 ...
IGF2BP3               0.011   insulin-like growth factor 2 mRNA binding protein 3 ...
C6orf222              0.011   hypothetical protein LOC389384 
LOC729370             0.011   PREDICTED: hypothetical protein 
PIP5K1C               0.011   phosphatidylinositol-4-phosphate 5-kinase, type I, g...
CHD7                  0.008   chromodomain helicase DNA binding protein 7 
LOC730351             0.008   PREDICTED: hypothetical protein 
LOC730351             0.008   PREDICTED: hypothetical protein 
LOC730351             0.008   PREDICTED: hypothetical protein 
LOC730351             0.008   PREDICTED: hypothetical protein 
TRAF3IP1              0.006   TNF receptor-associated factor 3 interacting protei...
LRRK1                 0.006   leucine-rich repeat kinase 1 
LOC100129810          0.006   PREDICTED: hypothetical protein 
LOC100129810          0.006   PREDICTED: hypothetical protein 
C10orf71              0.006   hypothetical protein LOC118461 isoform 1 
SETBP1                0.006   SET binding protein 1 isoform b 
SETBP1                0.006   SET binding protein 1 isoform a 
FNDC1                 0.006   fibronectin type III domain containing 1 
LOC100131930          0.006   PREDICTED: similar to hCG2004312 isoform 2 
LOC100131930          0.006   PREDICTED: similar to hCG2004312 isoform 1 
LOC100288367          0.006   PREDICTED: hypothetical protein XP_002343418 isofor...
LOC100288367          0.006   PREDICTED: hypothetical protein XP_002343419 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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