BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239749362 PREDICTED: hypothetical protein XP_002347023 [Homo sapiens] (156 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239749362 PREDICTED: hypothetical protein XP_002347023 [Homo ... 331 2e-91 gi|239749348 PREDICTED: hypothetical protein XP_002347004 [Homo ... 329 5e-91 gi|239748354 PREDICTED: hypothetical protein XP_002346637 [Homo ... 215 1e-56 gi|239749355 PREDICTED: hypothetical protein XP_002347008 [Homo ... 47 5e-06 gi|239748175 PREDICTED: hypothetical protein XP_002346569 [Homo ... 35 0.034 gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 32 0.17 gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ... 32 0.17 gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ... 32 0.17 gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.22 gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.22 gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 32 0.22 gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] 32 0.29 gi|45439370 TAO kinase 1 [Homo sapiens] 31 0.49 gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 30 0.64 gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 30 0.64 gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 30 0.64 gi|38372909 jumonji domain containing 1B [Homo sapiens] 30 0.64 gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens] 30 0.83 gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precurs... 30 0.83 gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs... 30 0.83 gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-ri... 30 1.1 gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens] 29 1.4 gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 29 1.4 gi|169179422 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4 gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 29 1.4 gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 29 1.4 gi|154146199 sal-like 3 [Homo sapiens] 29 1.8 gi|169215700 PREDICTED: hypothetical protein [Homo sapiens] 28 3.2 gi|169216113 PREDICTED: hypothetical protein [Homo sapiens] 28 3.2 gi|169215489 PREDICTED: hypothetical protein [Homo sapiens] 28 3.2 >gi|239749362 PREDICTED: hypothetical protein XP_002347023 [Homo sapiens] Length = 156 Score = 331 bits (848), Expect = 2e-91 Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60 MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS Sbjct: 1 MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60 Query: 61 LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120 LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP Sbjct: 61 LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120 Query: 121 NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156 NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP Sbjct: 121 NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156 >gi|239749348 PREDICTED: hypothetical protein XP_002347004 [Homo sapiens] Length = 156 Score = 329 bits (844), Expect = 5e-91 Identities = 155/156 (99%), Positives = 155/156 (99%) Query: 1 MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60 MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS Sbjct: 1 MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60 Query: 61 LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120 LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP Sbjct: 61 LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120 Query: 121 NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156 NTLSQGAGSAGPQRGSELGGPPALP HIPASWNPGP Sbjct: 121 NTLSQGAGSAGPQRGSELGGPPALPVHIPASWNPGP 156 >gi|239748354 PREDICTED: hypothetical protein XP_002346637 [Homo sapiens] Length = 167 Score = 215 bits (548), Expect = 1e-56 Identities = 107/128 (83%), Positives = 111/128 (86%), Gaps = 1/128 (0%) Query: 22 MSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRSLPHKLQERHSRHNTFQQVAMS 81 +SSSCSKD PPTCAGSTFG MRELPTISHL TAFLR LPHKLQERH RH TFQ+VAMS Sbjct: 4 VSSSCSKDRPPTCAGSTFGWAGMRELPTISHLCTAFLRRLPHKLQERHGRHTTFQRVAMS 63 Query: 82 SCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGP 141 SCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLS AGS+ PQ GSELGG Sbjct: 64 SCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSWTAGSSCPQHGSELGGH 123 Query: 142 -PALPAHI 148 P LP + Sbjct: 124 LPCLPTSL 131 >gi|239749355 PREDICTED: hypothetical protein XP_002347008 [Homo sapiens] Length = 167 Score = 47.4 bits (111), Expect = 5e-06 Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 11/135 (8%) Query: 21 FMSSSCSKDHPPTCAGSTFGQGRMRELPTIS--HLHTAFLRSLPHKLQERHSRHNTFQQV 78 FMSSSCSKD PPTCAGSTF +G P LH++ +K +RH++ Sbjct: 3 FMSSSCSKDRPPTCAGSTFVRGGWENFPPFPTYALHSSGACLTNYKGATADTRHSSGWPC 62 Query: 79 AMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPD----VGPNTLSQGAGSAGPQR 134 S L+ G +Y+ E S C V + NP+ V L Q A Sbjct: 63 LHVS--LKDRHQGN-IYISAERASAC--VVQLCSNGNPETQMLVQTPCLGQPALQVPSVG 117 Query: 135 GSELGGPPALPAHIP 149 + +G P LP +P Sbjct: 118 WNWVGHLPCLPTSLP 132 >gi|239748175 PREDICTED: hypothetical protein XP_002346569 [Homo sapiens] Length = 167 Score = 34.7 bits (78), Expect = 0.034 Identities = 15/27 (55%), Positives = 17/27 (62%) Query: 22 MSSSCSKDHPPTCAGSTFGQGRMRELP 48 +SSSCSK PTC GSTF +G P Sbjct: 4 VSSSCSKYRLPTCTGSTFSRGGCENFP 30 >gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] Length = 294 Score = 32.3 bits (72), Expect = 0.17 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 113 SRNPDVGPNTLSQGAGSAGP---QRGSELGGPPALPAHIPASWNP 154 SR+P GP ++ G + P Q S GP A P P +W+P Sbjct: 96 SRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDP 140 >gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo sapiens] Length = 315 Score = 32.3 bits (72), Expect = 0.17 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 113 SRNPDVGPNTLSQGAGSAGP---QRGSELGGPPALPAHIPASWNP 154 SR+P GP ++ G + P Q S GP A P P +W+P Sbjct: 96 SRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDP 140 >gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo sapiens] Length = 315 Score = 32.3 bits (72), Expect = 0.17 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 113 SRNPDVGPNTLSQGAGSAGP---QRGSELGGPPALPAHIPASWNP 154 SR+P GP ++ G + P Q S GP A P P +W+P Sbjct: 96 SRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDP 140 >gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo sapiens] Length = 1188 Score = 32.0 bits (71), Expect = 0.22 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154 SR V TL++G G+AGP E+ PP LPA PAS P Sbjct: 779 SREVAVVMPTLARG-GAAGPGEPVEVKEPPGLPAKPPASAQP 819 >gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo sapiens] Length = 1188 Score = 32.0 bits (71), Expect = 0.22 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154 SR V TL++G G+AGP E+ PP LPA PAS P Sbjct: 779 SREVAVVMPTLARG-GAAGPGEPVEVKEPPGLPAKPPASAQP 819 >gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sapiens] Length = 1188 Score = 32.0 bits (71), Expect = 0.22 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154 SR V TL++G G+AGP E+ PP LPA PAS P Sbjct: 779 SREVAVVMPTLARG-GAAGPGEPVEVKEPPGLPAKPPASAQP 819 >gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] Length = 1378 Score = 31.6 bits (70), Expect = 0.29 Identities = 16/45 (35%), Positives = 24/45 (53%) Query: 112 KSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156 +SR+ ++ S+G SAGP R S+ + A A+W PGP Sbjct: 732 RSRHGPASSSSSSEGEDSAGPARPSQKRPRCSATAQRVAAWTPGP 776 >gi|45439370 TAO kinase 1 [Homo sapiens] Length = 1001 Score = 30.8 bits (68), Expect = 0.49 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 21/112 (18%) Query: 46 ELPTISHLHTAFLRSL-PHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLC 104 E+ + + T +RSL + +E + + ++ S+ L SP E+FS Sbjct: 852 EMLALQNERTERIRSLLERQAREIEAFDSESMRLGFSNMVLSNLSP--------EAFSHS 903 Query: 105 SPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156 P W S NP GP GP G +GGPP H P P P Sbjct: 904 YPGASGW-SHNPTGGP----------GPHWGHPMGGPPQAWGH-PMQGGPQP 943 >gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H subunit isoform b [Homo sapiens] Length = 2347 Score = 30.4 bits (67), Expect = 0.64 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 116 PDVGPNTLSQGAGSAGP-QRGSELGGPPALPAHIPASWN-PGP 156 P + P+ + G GS P +G GGPP H P S N P P Sbjct: 614 PTILPSGVGSGKGSTSPGPKGKWAGGPPGTGGHGPLSLNSPDP 656 >gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H subunit isoform a [Homo sapiens] Length = 2353 Score = 30.4 bits (67), Expect = 0.64 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 116 PDVGPNTLSQGAGSAGP-QRGSELGGPPALPAHIPASWN-PGP 156 P + P+ + G GS P +G GGPP H P S N P P Sbjct: 614 PTILPSGVGSGKGSTSPGPKGKWAGGPPGTGGHGPLSLNSPDP 656 >gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo sapiens] Length = 1336 Score = 30.4 bits (67), Expect = 0.64 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 106 PAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156 PA +W +P+ P L GAG AG G+ GG PA P A+ P P Sbjct: 1056 PAPARWPRSDPESQP-LLGPGAGGAGGTGGAG-GGAPAAPPPCRAAPPPCP 1104 >gi|38372909 jumonji domain containing 1B [Homo sapiens] Length = 1761 Score = 30.4 bits (67), Expect = 0.64 Identities = 17/45 (37%), Positives = 19/45 (42%) Query: 100 SFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPAL 144 S S C PA K K +V N G S GP +G G P L Sbjct: 291 SDSGCDPASKKLKGDRGEVDSNGSDGGEASRGPWKGGNASGEPGL 335 >gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens] Length = 1171 Score = 30.0 bits (66), Expect = 0.83 Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 7/132 (5%) Query: 14 VVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRSLPHKLQERHSRHN 73 VV ++ GF+ +S + T A + ++ +LPT+ + + P ++ N Sbjct: 508 VVGSQKGFLGASLANSPYATLASAESSSSKLTDLPTVVTKNNQVM--FPVNSKKTSKLWN 565 Query: 74 TFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSR-NPDVGPNTLSQGAGSAGP 132 F + S ++ G+ + G++ +L + +L+ R + +V +S+ A + P Sbjct: 566 HFSICSADSTKVVCLHCGRTISRGKKPTNLGTSCLLRHLQRFHSNVLKTEVSETARPSSP 625 Query: 133 Q----RGSELGG 140 RG+EL G Sbjct: 626 DTRVPRGTELSG 637 >gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precursor [Homo sapiens] Length = 803 Score = 30.0 bits (66), Expect = 0.83 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Query: 64 KLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPD 117 K++++ SRHN +C+LE P K L R ++ L + AVL + +NP+ Sbjct: 368 KVRDKDSRHN-----GEVTCKLEGDVPFKILTSSRNTYKLVTDAVLD-REQNPE 415 >gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor [Homo sapiens] Length = 923 Score = 30.0 bits (66), Expect = 0.83 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Query: 64 KLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPD 117 K++++ SRHN +C+LE P K L R ++ L + AVL + +NP+ Sbjct: 368 KVRDKDSRHN-----GEVTCKLEGDVPFKILTSSRNTYKLVTDAVLD-REQNPE 415 >gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Homo sapiens] Length = 270 Score = 29.6 bits (65), Expect = 1.1 Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154 S P ++ GAGS+ GS G PA AH+PA+ P Sbjct: 173 SSTPGGSGSSSGGGAGSSNSGGGSGSGNMPASVAHVPAAMLP 214 >gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens] Length = 551 Score = 29.3 bits (64), Expect = 1.4 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 11/59 (18%) Query: 98 RESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156 R+ L SP++L S P + + G AG +R PP+L +P W+P P Sbjct: 424 RDDLLLFSPSLLGGPS------PPSTAPGGSGAGEERM-----PPSLQERVPRDWDPQP 471 >gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 814 Score = 29.3 bits (64), Expect = 1.4 Identities = 14/41 (34%), Positives = 18/41 (43%) Query: 110 KWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPA 150 KWK +NP + + G G GP G G P L P+ Sbjct: 716 KWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPS 756 >gi|169179422 PREDICTED: hypothetical protein [Homo sapiens] Length = 645 Score = 29.3 bits (64), Expect = 1.4 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 11/76 (14%) Query: 84 QLERSSPGKY-LYLGRESFSLCSPAVLKWKSRNPDV----GPNTLSQGAGSAGPQRGSEL 138 Q+ S P K+ L+L RE C+P V K N DV T+ G G Q G Sbjct: 257 QVVGSHPAKHPLFLARED--ACTPEV---KGINMDVCEEPASRTMPYCGGGGGSQPGVS- 310 Query: 139 GGPPALPAHIPASWNP 154 GGP L + P+S+ P Sbjct: 311 GGPDTLTPNSPSSFLP 326 >gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 653 Score = 29.3 bits (64), Expect = 1.4 Identities = 14/41 (34%), Positives = 18/41 (43%) Query: 110 KWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPA 150 KWK +NP + + G G GP G G P L P+ Sbjct: 151 KWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPS 191 >gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] Length = 411 Score = 29.3 bits (64), Expect = 1.4 Identities = 14/41 (34%), Positives = 18/41 (43%) Query: 110 KWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPA 150 KWK +NP + + G G GP G G P L P+ Sbjct: 313 KWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPS 353 >gi|154146199 sal-like 3 [Homo sapiens] Length = 1300 Score = 28.9 bits (63), Expect = 1.8 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 29/134 (21%) Query: 29 DHPPTCAGSTFGQGRMRELPTISHLHTA-FLRSLPHKLQERHSRHNTFQQVAMSSCQLER 87 D+ PTC+G +G E P + L + L ++P + QL Sbjct: 489 DNVPTCSGIPYGMSLPPEKPVTTWLDSKPVLPTVPTSV----------------GLQLPP 532 Query: 88 SSPGKYLYLGRESFSLCS-------PAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140 + PG + Y S + S PA + S +P G N + G + S LGG Sbjct: 533 TVPGAHGYADSPSATPASRSPQRPSPASSECASLSP--GLNHVESGVSATAESPQSLLGG 590 Query: 141 PP---ALPAHIPAS 151 PP A P +P + Sbjct: 591 PPLTKAEPVSLPCT 604 >gi|169215700 PREDICTED: hypothetical protein [Homo sapiens] Length = 373 Score = 28.1 bits (61), Expect = 3.2 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 81 SSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140 ++C L+R Y Y S+ L+W N LS + + GP+ + Sbjct: 231 AACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASATMGPEAST---S 287 Query: 141 PPALP 145 PP LP Sbjct: 288 PPPLP 292 >gi|169216113 PREDICTED: hypothetical protein [Homo sapiens] Length = 373 Score = 28.1 bits (61), Expect = 3.2 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 81 SSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140 ++C L+R Y Y S+ L+W N LS + + GP+ + Sbjct: 231 AACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASATMGPEAST---S 287 Query: 141 PPALP 145 PP LP Sbjct: 288 PPPLP 292 >gi|169215489 PREDICTED: hypothetical protein [Homo sapiens] Length = 373 Score = 28.1 bits (61), Expect = 3.2 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 81 SSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140 ++C L+R Y Y S+ L+W N LS + + GP+ + Sbjct: 231 AACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASATMGPEAST---S 287 Query: 141 PPALP 145 PP LP Sbjct: 288 PPPLP 292 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.131 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,329,089 Number of Sequences: 37866 Number of extensions: 429188 Number of successful extensions: 1756 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 34 Number of HSP's that attempted gapping in prelim test: 1706 Number of HSP's gapped (non-prelim): 91 length of query: 156 length of database: 18,247,518 effective HSP length: 94 effective length of query: 62 effective length of database: 14,688,114 effective search space: 910663068 effective search space used: 910663068 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.