Guide to the Human Genome
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Search of human proteins with 239749362

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749362 PREDICTED: hypothetical protein XP_002347023 [Homo
sapiens]
         (156 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749362 PREDICTED: hypothetical protein XP_002347023 [Homo ...   331   2e-91
gi|239749348 PREDICTED: hypothetical protein XP_002347004 [Homo ...   329   5e-91
gi|239748354 PREDICTED: hypothetical protein XP_002346637 [Homo ...   215   1e-56
gi|239749355 PREDICTED: hypothetical protein XP_002347008 [Homo ...    47   5e-06
gi|239748175 PREDICTED: hypothetical protein XP_002346569 [Homo ...    35   0.034
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]            32   0.17 
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ...    32   0.17 
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ...    32   0.17 
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom...    32   0.22 
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom...    32   0.22 
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap...    32   0.22 
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]        32   0.29 
gi|45439370 TAO kinase 1 [Homo sapiens]                                31   0.49 
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H...    30   0.64 
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H...    30   0.64 
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...    30   0.64 
gi|38372909 jumonji domain containing 1B [Homo sapiens]                30   0.64 
gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]         30   0.83 
gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precurs...    30   0.83 
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs...    30   0.83 
gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-ri...    30   1.1  
gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens]        29   1.4  
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  29   1.4  
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]            29   1.4  
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  29   1.4  
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]                29   1.4  
gi|154146199 sal-like 3 [Homo sapiens]                                 29   1.8  
gi|169215700 PREDICTED: hypothetical protein [Homo sapiens]            28   3.2  
gi|169216113 PREDICTED: hypothetical protein [Homo sapiens]            28   3.2  
gi|169215489 PREDICTED: hypothetical protein [Homo sapiens]            28   3.2  

>gi|239749362 PREDICTED: hypothetical protein XP_002347023 [Homo
           sapiens]
          Length = 156

 Score =  331 bits (848), Expect = 2e-91
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60
           MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS
Sbjct: 1   MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60

Query: 61  LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120
           LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP
Sbjct: 61  LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120

Query: 121 NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156
           NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP
Sbjct: 121 NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156


>gi|239749348 PREDICTED: hypothetical protein XP_002347004 [Homo
           sapiens]
          Length = 156

 Score =  329 bits (844), Expect = 5e-91
 Identities = 155/156 (99%), Positives = 155/156 (99%)

Query: 1   MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60
           MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS
Sbjct: 1   MGSKCPVCTLPLSVVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRS 60

Query: 61  LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120
           LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP
Sbjct: 61  LPHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGP 120

Query: 121 NTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156
           NTLSQGAGSAGPQRGSELGGPPALP HIPASWNPGP
Sbjct: 121 NTLSQGAGSAGPQRGSELGGPPALPVHIPASWNPGP 156


>gi|239748354 PREDICTED: hypothetical protein XP_002346637 [Homo
           sapiens]
          Length = 167

 Score =  215 bits (548), Expect = 1e-56
 Identities = 107/128 (83%), Positives = 111/128 (86%), Gaps = 1/128 (0%)

Query: 22  MSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRSLPHKLQERHSRHNTFQQVAMS 81
           +SSSCSKD PPTCAGSTFG   MRELPTISHL TAFLR LPHKLQERH RH TFQ+VAMS
Sbjct: 4   VSSSCSKDRPPTCAGSTFGWAGMRELPTISHLCTAFLRRLPHKLQERHGRHTTFQRVAMS 63

Query: 82  SCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGP 141
           SCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLS  AGS+ PQ GSELGG 
Sbjct: 64  SCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSWTAGSSCPQHGSELGGH 123

Query: 142 -PALPAHI 148
            P LP  +
Sbjct: 124 LPCLPTSL 131


>gi|239749355 PREDICTED: hypothetical protein XP_002347008 [Homo
           sapiens]
          Length = 167

 Score = 47.4 bits (111), Expect = 5e-06
 Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 11/135 (8%)

Query: 21  FMSSSCSKDHPPTCAGSTFGQGRMRELPTIS--HLHTAFLRSLPHKLQERHSRHNTFQQV 78
           FMSSSCSKD PPTCAGSTF +G     P      LH++      +K     +RH++    
Sbjct: 3   FMSSSCSKDRPPTCAGSTFVRGGWENFPPFPTYALHSSGACLTNYKGATADTRHSSGWPC 62

Query: 79  AMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPD----VGPNTLSQGAGSAGPQR 134
              S  L+    G  +Y+  E  S C   V    + NP+    V    L Q A       
Sbjct: 63  LHVS--LKDRHQGN-IYISAERASAC--VVQLCSNGNPETQMLVQTPCLGQPALQVPSVG 117

Query: 135 GSELGGPPALPAHIP 149
            + +G  P LP  +P
Sbjct: 118 WNWVGHLPCLPTSLP 132


>gi|239748175 PREDICTED: hypothetical protein XP_002346569 [Homo
          sapiens]
          Length = 167

 Score = 34.7 bits (78), Expect = 0.034
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 22 MSSSCSKDHPPTCAGSTFGQGRMRELP 48
          +SSSCSK   PTC GSTF +G     P
Sbjct: 4  VSSSCSKYRLPTCTGSTFSRGGCENFP 30


>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 294

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 113 SRNPDVGPNTLSQGAGSAGP---QRGSELGGPPALPAHIPASWNP 154
           SR+P  GP   ++  G + P   Q  S   GP A P   P +W+P
Sbjct: 96  SRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDP 140


>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
           sapiens]
          Length = 315

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 113 SRNPDVGPNTLSQGAGSAGP---QRGSELGGPPALPAHIPASWNP 154
           SR+P  GP   ++  G + P   Q  S   GP A P   P +W+P
Sbjct: 96  SRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDP 140


>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
           sapiens]
          Length = 315

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 113 SRNPDVGPNTLSQGAGSAGP---QRGSELGGPPALPAHIPASWNP 154
           SR+P  GP   ++  G + P   Q  S   GP A P   P +W+P
Sbjct: 96  SRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDP 140


>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154
           SR   V   TL++G G+AGP    E+  PP LPA  PAS  P
Sbjct: 779 SREVAVVMPTLARG-GAAGPGEPVEVKEPPGLPAKPPASAQP 819


>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154
           SR   V   TL++G G+AGP    E+  PP LPA  PAS  P
Sbjct: 779 SREVAVVMPTLARG-GAAGPGEPVEVKEPPGLPAKPPASAQP 819


>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
           sapiens]
          Length = 1188

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154
           SR   V   TL++G G+AGP    E+  PP LPA  PAS  P
Sbjct: 779 SREVAVVMPTLARG-GAAGPGEPVEVKEPPGLPAKPPASAQP 819


>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
          Length = 1378

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 112 KSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156
           +SR+     ++ S+G  SAGP R S+     +  A   A+W PGP
Sbjct: 732 RSRHGPASSSSSSEGEDSAGPARPSQKRPRCSATAQRVAAWTPGP 776


>gi|45439370 TAO kinase 1 [Homo sapiens]
          Length = 1001

 Score = 30.8 bits (68), Expect = 0.49
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 21/112 (18%)

Query: 46  ELPTISHLHTAFLRSL-PHKLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLC 104
           E+  + +  T  +RSL   + +E  +  +   ++  S+  L   SP        E+FS  
Sbjct: 852 EMLALQNERTERIRSLLERQAREIEAFDSESMRLGFSNMVLSNLSP--------EAFSHS 903

Query: 105 SPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156
            P    W S NP  GP          GP  G  +GGPP    H P    P P
Sbjct: 904 YPGASGW-SHNPTGGP----------GPHWGHPMGGPPQAWGH-PMQGGPQP 943


>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
           subunit isoform b [Homo sapiens]
          Length = 2347

 Score = 30.4 bits (67), Expect = 0.64
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 116 PDVGPNTLSQGAGSAGP-QRGSELGGPPALPAHIPASWN-PGP 156
           P + P+ +  G GS  P  +G   GGPP    H P S N P P
Sbjct: 614 PTILPSGVGSGKGSTSPGPKGKWAGGPPGTGGHGPLSLNSPDP 656


>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
           subunit isoform a [Homo sapiens]
          Length = 2353

 Score = 30.4 bits (67), Expect = 0.64
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 116 PDVGPNTLSQGAGSAGP-QRGSELGGPPALPAHIPASWN-PGP 156
           P + P+ +  G GS  P  +G   GGPP    H P S N P P
Sbjct: 614 PTILPSGVGSGKGSTSPGPKGKWAGGPPGTGGHGPLSLNSPDP 656


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
            sapiens]
          Length = 1336

 Score = 30.4 bits (67), Expect = 0.64
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 106  PAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156
            PA  +W   +P+  P  L  GAG AG   G+  GG PA P    A+  P P
Sbjct: 1056 PAPARWPRSDPESQP-LLGPGAGGAGGTGGAG-GGAPAAPPPCRAAPPPCP 1104


>gi|38372909 jumonji domain containing 1B [Homo sapiens]
          Length = 1761

 Score = 30.4 bits (67), Expect = 0.64
 Identities = 17/45 (37%), Positives = 19/45 (42%)

Query: 100 SFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPAL 144
           S S C PA  K K    +V  N    G  S GP +G    G P L
Sbjct: 291 SDSGCDPASKKLKGDRGEVDSNGSDGGEASRGPWKGGNASGEPGL 335


>gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]
          Length = 1171

 Score = 30.0 bits (66), Expect = 0.83
 Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 7/132 (5%)

Query: 14  VVANRNGFMSSSCSKDHPPTCAGSTFGQGRMRELPTISHLHTAFLRSLPHKLQERHSRHN 73
           VV ++ GF+ +S +     T A +     ++ +LPT+   +   +   P   ++     N
Sbjct: 508 VVGSQKGFLGASLANSPYATLASAESSSSKLTDLPTVVTKNNQVM--FPVNSKKTSKLWN 565

Query: 74  TFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSR-NPDVGPNTLSQGAGSAGP 132
            F   +  S ++     G+ +  G++  +L +  +L+   R + +V    +S+ A  + P
Sbjct: 566 HFSICSADSTKVVCLHCGRTISRGKKPTNLGTSCLLRHLQRFHSNVLKTEVSETARPSSP 625

Query: 133 Q----RGSELGG 140
                RG+EL G
Sbjct: 626 DTRVPRGTELSG 637


>gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 803

 Score = 30.0 bits (66), Expect = 0.83
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 64  KLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPD 117
           K++++ SRHN        +C+LE   P K L   R ++ L + AVL  + +NP+
Sbjct: 368 KVRDKDSRHN-----GEVTCKLEGDVPFKILTSSRNTYKLVTDAVLD-REQNPE 415


>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score = 30.0 bits (66), Expect = 0.83
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 64  KLQERHSRHNTFQQVAMSSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPD 117
           K++++ SRHN        +C+LE   P K L   R ++ L + AVL  + +NP+
Sbjct: 368 KVRDKDSRHN-----GEVTCKLEGDVPFKILTSSRNTYKLVTDAVLD-REQNPE 415


>gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-rich
           carboxy-terminal domain, 2 [Homo sapiens]
          Length = 270

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 113 SRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNP 154
           S  P    ++   GAGS+    GS  G  PA  AH+PA+  P
Sbjct: 173 SSTPGGSGSSSGGGAGSSNSGGGSGSGNMPASVAHVPAAMLP 214


>gi|4504665 interleukin 2 receptor beta precursor [Homo sapiens]
          Length = 551

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 11/59 (18%)

Query: 98  RESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPASWNPGP 156
           R+   L SP++L   S      P + + G   AG +R      PP+L   +P  W+P P
Sbjct: 424 RDDLLLFSPSLLGGPS------PPSTAPGGSGAGEERM-----PPSLQERVPRDWDPQP 471


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 110 KWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPA 150
           KWK +NP    +  + G G  GP  G   G P  L    P+
Sbjct: 716 KWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPS 756


>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 645

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 11/76 (14%)

Query: 84  QLERSSPGKY-LYLGRESFSLCSPAVLKWKSRNPDV----GPNTLSQGAGSAGPQRGSEL 138
           Q+  S P K+ L+L RE    C+P V   K  N DV       T+    G  G Q G   
Sbjct: 257 QVVGSHPAKHPLFLARED--ACTPEV---KGINMDVCEEPASRTMPYCGGGGGSQPGVS- 310

Query: 139 GGPPALPAHIPASWNP 154
           GGP  L  + P+S+ P
Sbjct: 311 GGPDTLTPNSPSSFLP 326


>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 653

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 110 KWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPA 150
           KWK +NP    +  + G G  GP  G   G P  L    P+
Sbjct: 151 KWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPS 191


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 110 KWKSRNPDVGPNTLSQGAGSAGPQRGSELGGPPALPAHIPA 150
           KWK +NP    +  + G G  GP  G   G P  L    P+
Sbjct: 313 KWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPS 353


>gi|154146199 sal-like 3 [Homo sapiens]
          Length = 1300

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 29/134 (21%)

Query: 29  DHPPTCAGSTFGQGRMRELPTISHLHTA-FLRSLPHKLQERHSRHNTFQQVAMSSCQLER 87
           D+ PTC+G  +G     E P  + L +   L ++P  +                  QL  
Sbjct: 489 DNVPTCSGIPYGMSLPPEKPVTTWLDSKPVLPTVPTSV----------------GLQLPP 532

Query: 88  SSPGKYLYLGRESFSLCS-------PAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140
           + PG + Y    S +  S       PA  +  S +P  G N +  G  +      S LGG
Sbjct: 533 TVPGAHGYADSPSATPASRSPQRPSPASSECASLSP--GLNHVESGVSATAESPQSLLGG 590

Query: 141 PP---ALPAHIPAS 151
           PP   A P  +P +
Sbjct: 591 PPLTKAEPVSLPCT 604


>gi|169215700 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 81  SSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140
           ++C L+R     Y Y    S+       L+W   N       LS  + + GP+  +    
Sbjct: 231 AACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASATMGPEAST---S 287

Query: 141 PPALP 145
           PP LP
Sbjct: 288 PPPLP 292


>gi|169216113 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 81  SSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140
           ++C L+R     Y Y    S+       L+W   N       LS  + + GP+  +    
Sbjct: 231 AACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASATMGPEAST---S 287

Query: 141 PPALP 145
           PP LP
Sbjct: 288 PPPLP 292


>gi|169215489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 373

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 81  SSCQLERSSPGKYLYLGRESFSLCSPAVLKWKSRNPDVGPNTLSQGAGSAGPQRGSELGG 140
           ++C L+R     Y Y    S+       L+W   N       LS  + + GP+  +    
Sbjct: 231 AACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASATMGPEAST---S 287

Query: 141 PPALP 145
           PP LP
Sbjct: 288 PPPLP 292


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,329,089
Number of Sequences: 37866
Number of extensions: 429188
Number of successful extensions: 1756
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1706
Number of HSP's gapped (non-prelim): 91
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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