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Search of human proteins with 239749209
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
sapiens]
(262 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ... 538 e-153
gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo ... 212 2e-55
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 47 2e-05
gi|169166294 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 44 1e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens] 44 1e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 42 4e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 42 5e-04
gi|169168296 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169168044 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169167512 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|238859651 pleckstrin homology domain containing family A memb... 40 0.002
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 40 0.002
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 40 0.002
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 40 0.002
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 40 0.002
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 40 0.002
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.003
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.003
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 40 0.003
gi|163965366 nascent polypeptide-associated complex alpha subuni... 40 0.003
gi|169160624 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|113412136 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|113408483 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 39 0.005
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 39 0.005
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 39 0.005
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.005
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
>gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
sapiens]
Length = 262
Score = 538 bits (1386), Expect = e-153
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA
Sbjct: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
Query: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDR 120
REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDR
Sbjct: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDR 120
Query: 121 GACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPH 180
GACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPH
Sbjct: 121 GACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPH 180
Query: 181 ARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRRLGWATPNPLPGHRGSLYPAFSVLA 240
ARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRRLGWATPNPLPGHRGSLYPAFSVLA
Sbjct: 181 ARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRRLGWATPNPLPGHRGSLYPAFSVLA 240
Query: 241 ALVEGSSLARPCALVEIPEEQM 262
ALVEGSSLARPCALVEIPEEQM
Sbjct: 241 ALVEGSSLARPCALVEIPEEQM 262
>gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo
sapiens]
Length = 104
Score = 212 bits (540), Expect = 2e-55
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA
Sbjct: 1 MGGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
Query: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE 104
REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE
Sbjct: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAE 104
>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 47.4 bits (111), Expect = 1e-05
Identities = 69/213 (32%), Positives = 83/213 (38%), Gaps = 37/213 (17%)
Query: 3 GSAKGMPRKAET--GPPGVFRRMPRSRPPRTVTSSSASSRPSA-PTPPPRSQRRRRRSGE 59
G+A +PR+ G P R S TVTSS AS+ SA PT + RR
Sbjct: 28 GTAGNLPRRLPLAQGSPRCCRFCKGSVSTATVTSSGASAPGSADPTLGSTAARRASAPWA 87
Query: 60 AREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHD 119
G C + A AR P RRQS T + R A +SP + G H
Sbjct: 88 CPAGCCRAN------APAPARNPRRKEPRRQSRATGKSARTRRACASP-----CRPGRH- 135
Query: 120 RGACG-NTARRLLP-------GGGRLRSPRDPAWESGRRRPASGV----RVESGVLPVPG 167
CG TARR P GG R+ S P+ G RP+ V R S LP
Sbjct: 136 ---CGPETARRPRPLAGTTFCGGARVLSNPPPSGSGGDARPSPLVPRRCRATSASLPQET 192
Query: 168 PRGSRLSKLGGPHARSPHGNR-----VPQARSP 195
P LS + P RS R VP A+ P
Sbjct: 193 P--FALSVVWAPRRRSQGDARGRRTGVPCAKRP 223
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 47.0 bits (110), Expect = 2e-05
Identities = 63/244 (25%), Positives = 84/244 (34%), Gaps = 45/244 (18%)
Query: 13 ETGPPGVFRRMPRSR--------PPRTVTSSSASSRPSAPTPPPRSQRRR---------- 54
+ PP ++P+S P T S ASS P +P P P R
Sbjct: 402 DRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKN 461
Query: 55 RRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQ 114
R G A+ H +R+P A R +S T+R + SP W
Sbjct: 462 RSHGRAKRDKSHSHTPSRRMG--RSRSPA-TAKRGRSRSRTPTKRGHSRSRSPQWR--RS 516
Query: 115 RGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLS 174
R G + RR GR RSP+ P W R G SR +
Sbjct: 517 RSAQRWGRSRSPQRR-----GRSRSPQRPGWSRSRNTQRRG--------------RSRSA 557
Query: 175 KLGGPHARSPHGNRVPQARSPALRS---LETAARWRKKQPLGPRRLGWATPNPLPGHRGS 231
+ G H+RSP ++R+PA R T AR R + RR + G S
Sbjct: 558 RRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRS 617
Query: 232 LYPA 235
PA
Sbjct: 618 RTPA 621
Score = 45.4 bits (106), Expect = 5e-05
Identities = 52/185 (28%), Positives = 73/185 (39%), Gaps = 21/185 (11%)
Query: 9 PRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRH 68
PR++ +G + PR+ P R + S +S P AP P R+ RR RSG + +G
Sbjct: 1593 PRRSRSGSSPEVKDKPRAAP-RAQSGSDSSPEPKAPAP--RALPRRSRSGSSSKGRGPSP 1649
Query: 69 CGGLMAAGQAARTPVPDADRRQSAVTDATQ-------RPAAAESSPVWT--GLLQRGPHD 119
G P RR S + + R ++ SSP T L R
Sbjct: 1650 EGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRS 1709
Query: 120 RGACGNTARRLLPGGGRLRS-----PRDPAWESGRRRPASGVRVES----GVLPVPGPRG 170
+ T R P R S P + + S RRR AS R ++ G P P PRG
Sbjct: 1710 ASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRG 1769
Query: 171 SRLSK 175
+ S+
Sbjct: 1770 LQRSR 1774
Score = 34.7 bits (78), Expect = 0.087
Identities = 57/210 (27%), Positives = 81/210 (38%), Gaps = 40/210 (19%)
Query: 10 RKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHC 69
R P G+ R RSR +T T+ S+ + R QR R RS R R
Sbjct: 1761 RSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR-----RRR 1815
Query: 70 GGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARR 129
GG +G +R+P R++S+ T + +R + + P T+R+
Sbjct: 1816 GG---SGYHSRSPA----RQESSRTSSRRRRGRSRTPP------------------TSRK 1850
Query: 130 LLPGGGRLRSPRDPA-WESGRRR--PASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHG 186
R RS PA W+ R R PA+ R S P+ R SR RS
Sbjct: 1851 ------RSRSRTSPAPWKRSRSRASPATHRRSRSRT-PLISRRRSRSRTSPVSRRRSRSR 1903
Query: 187 NRVPQARSPALRSLETAARWRKKQPLGPRR 216
V + RS + S + R R + P RR
Sbjct: 1904 TSVTRRRSRSRASPVSRRRSRSRTPPVTRR 1933
Score = 34.3 bits (77), Expect = 0.11
Identities = 59/246 (23%), Positives = 90/246 (36%), Gaps = 37/246 (15%)
Query: 2 GGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPS------APTPPPRSQRRR- 54
G S P + + RR RSR P + S S P+ + TP R + R
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSR 672
Query: 55 ---RRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTG 111
RRSG +R +R +RTP R +S V +R + +P G
Sbjct: 673 TPARRSGRSRSRTPARR------GRSRSRTPRRGRSRSRSLV----RRGRSHSRTPQRRG 722
Query: 112 LLQRGPHDRGACGNTARRLLPGG------GRLRSPRDPAWESGRRRPASGV---RVESGV 162
+ + RR R+ S R + S R + S + R SG
Sbjct: 723 RSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGS 782
Query: 163 LPVPGPRGSRLSKLGGPHARSPHGNRVPQA--RSPALRSLETAARWRKKQPLGPRRLGWA 220
P P + P RS G+ P+A R+P RS +++ K++ P R +
Sbjct: 783 SPCPKQKSQT------PPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHS 836
Query: 221 TPNPLP 226
+ +P P
Sbjct: 837 SSSPHP 842
Score = 34.3 bits (77), Expect = 0.11
Identities = 48/194 (24%), Positives = 66/194 (34%), Gaps = 22/194 (11%)
Query: 10 RKAETGPPGVFRRMPRSRPPRTVTSSSASSRP------SAPTPPPRSQRRRRRSGEAREG 63
R++ + P V RR RSR P T S + + P + TPP +R R R+
Sbjct: 1921 RRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRR 1980
Query: 64 VCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQR-------PAAAESSPVWTGLLQRG 116
+ +RT R +S + T+R PA S T LL R
Sbjct: 1981 RSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPR- 2039
Query: 117 PHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKL 176
R RR R R+PR + R +R S G R
Sbjct: 2040 KRSRSRSPLAIRR----RSRSRTPRTARGKRSLTRSPPAIRRRS----ASGSSSDRSRSA 2091
Query: 177 GGPHARSPHGNRVP 190
P R+ G+R P
Sbjct: 2092 TPPATRNHSGSRTP 2105
Score = 33.9 bits (76), Expect = 0.15
Identities = 44/180 (24%), Positives = 63/180 (35%), Gaps = 25/180 (13%)
Query: 28 PPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRH-CGGLMAAGQAARTPVPDA 86
PPR + +S + + TP RS E + SRH C G + TP +
Sbjct: 849 PPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQS 908
Query: 87 DRRQS-------AVTDATQRPAAAESSP----VWTGLLQRGPHDRGACGNTARRLLPGGG 135
R S A+ QR + SSP V + R C N RLLP
Sbjct: 909 PSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYS 968
Query: 136 RLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHGNRVPQARSP 195
SG P + V+ E+ P +S A++P G + ++SP
Sbjct: 969 ----------HSGSSSPDTKVKPET---PPRQSHSGSISPYPKVKAQTPPGPSLSGSKSP 1015
Score = 32.3 bits (72), Expect = 0.43
Identities = 52/198 (26%), Positives = 67/198 (33%), Gaps = 22/198 (11%)
Query: 27 RPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA-----REGVCSRHCGGLMAAGQAART 81
R P SSSASS P PR+ RR RSG + G SRH ++
Sbjct: 1412 RTPSRERSSSASS-PEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHS---LSGSSPGMK 1467
Query: 82 PVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGRLRSPR 141
+P R + D++ P A +P P C T +R G +
Sbjct: 1468 DIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKC-LTPQRERSGSESSVDQK 1526
Query: 142 DPAWESGRRRPASGVRVESGVLPVPGPR---GSRLSKLGGPHARSPHGNRVPQARSPALR 198
A +R SG E V P P+ S S R+P R SP +
Sbjct: 1527 TVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVD 1586
Query: 199 SLETAARWRKKQPLGPRR 216
S K L PRR
Sbjct: 1587 S---------KSRLSPRR 1595
Score = 31.6 bits (70), Expect = 0.73
Identities = 50/214 (23%), Positives = 76/214 (35%), Gaps = 37/214 (17%)
Query: 26 SRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGG--LMAAGQAARTPV 83
+RP + SS P APTP + RH G +A ++ PV
Sbjct: 348 TRPSPSPERSSTGPEPPAPTPL----------------LAERHGGSPQPLATTPLSQEPV 391
Query: 84 -------PDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGR 136
P DR + + +++ESSP + H + + PG R
Sbjct: 392 NPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHR 451
Query: 137 --LRSPRDPAWESGR-RRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHGNRVPQAR 193
SP GR +R S S + R +K G +R+P ++R
Sbjct: 452 EISSSPTSKNRSHGRAKRDKSHSHTPS--RRMGRSRSPATAKRGRSRSRTPTKRGHSRSR 509
Query: 194 SPALRSLETAARW-------RKKQPLGPRRLGWA 220
SP R +A RW R+ + P+R GW+
Sbjct: 510 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWS 543
Score = 31.2 bits (69), Expect = 0.96
Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 18/225 (8%)
Query: 8 MPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRP--SAPTPPPRSQRRRRR---SGEARE 62
+PR + +G ++ PPR S S S P A TPP S + ++++
Sbjct: 964 LPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKD 1023
Query: 63 GVCSRHCGGL-MAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRG 121
+ G L + AG + TP ++ S++ Q + + + R H
Sbjct: 1024 SLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSES 1083
Query: 122 ACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPV----PGPRGSRLSKLG 177
+ + P GGR RS P E R P R E P+ P SR
Sbjct: 1084 PSLQSKSQTSPKGGRSRS-SSPVTELASRSPIRQDRGEFSASPMLKSGMSPEQSRFQSDS 1142
Query: 178 GPHARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRRLGWATP 222
+ + + Q+R LETA ++K L P+ A+P
Sbjct: 1143 SSYPTVDSNSLLGQSR------LETAES-KEKMALPPQEDATASP 1180
Score = 29.6 bits (65), Expect = 2.8
Identities = 41/200 (20%), Positives = 65/200 (32%), Gaps = 24/200 (12%)
Query: 37 ASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDA 96
A R +PTP P+ R R E R ++ ++ + + S+ + +
Sbjct: 2575 ALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2634
Query: 97 TQRPAAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGV 156
+ +++ SS ++ PG L P P ++ P
Sbjct: 2635 SSSSSSSSSS----------------SSSSPSPAKPGPQALPKPASP-----KKPPPGER 2673
Query: 157 RVESGVLPVPGPRGSRLSKLGGPHARSPHGNRVP--QARSPALRSLETAARWRKKQPLGP 214
R S P+ R SR R P P Q S + R R + P
Sbjct: 2674 RSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHK 2733
Query: 215 RRLGWATPNPLPGHRGSLYP 234
RR +P P+ HR S P
Sbjct: 2734 RRRETPSPRPM-RHRSSRSP 2752
Score = 28.5 bits (62), Expect = 6.2
Identities = 66/278 (23%), Positives = 92/278 (33%), Gaps = 70/278 (25%)
Query: 17 PGVFRRMPRSRPPRTVTSSSASSRPSAPTPP-PRSQRRRRRSGEAREGVC---------- 65
PG+ + SR P +V + S P P P QR A+ +
Sbjct: 2133 PGMLEPLGSSRTPMSVLQQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAISLGT 2192
Query: 66 SRHCGGLMAAGQAAR-----TPVPDADRRQSAVTDATQRPAAAESS------------PV 108
+R + AAG AAR PVP R + + R AA ++ P
Sbjct: 2193 ARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPT 2252
Query: 109 WTGLLQRGPHDRGACGNTA---RRLLPGGGRLRSPRDPAWE----SGRRRPASGVRVE-- 159
L A N A + P L PR P +G R PA+ +
Sbjct: 2253 AVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLT 2312
Query: 160 -SGVLPVPGPRGSRLSKLGGPHARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRRLG 218
SG P A P +R PQA PA +L +GPR
Sbjct: 2313 GSGTPPTA--------------ANYPSSSRTPQA--PASANL-----------VGPRSAH 2345
Query: 219 WATPNPLPGHR--GSLYPA---FSVLAALVEGSSLARP 251
P + G R +L PA + +A + G++L P
Sbjct: 2346 ATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSP 2383
Score = 28.5 bits (62), Expect = 6.2
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 2 GGSAKGMPRKAETGPPGVFR-RMPRS-----RPPRTVTSSSASSRPSAPTPPPRSQRRRR 55
G A P + PPG R R PR R R+++ S R +P P PR Q+
Sbjct: 2655 GPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSS 2714
Query: 56 RSGEAREG 63
+R G
Sbjct: 2715 SERGSRRG 2722
Score = 28.1 bits (61), Expect = 8.1
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 15/93 (16%)
Query: 14 TGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLM 73
T PP + R RSR P + S S + AP+P R + +S L
Sbjct: 2397 TSPPLLDRA--RSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQS-------------LLP 2441
Query: 74 AAGQAARTPVPDADRRQSAVTDATQRPAAAESS 106
A R+PVP A QS A P A S
Sbjct: 2442 PAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQS 2474
>gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 45.1 bits (105), Expect = 6e-05
Identities = 68/213 (31%), Positives = 82/213 (38%), Gaps = 37/213 (17%)
Query: 3 GSAKGMPRKAET--GPPGVFRRMPRSRPPRTVTSSSASSRPSA-PTPPPRSQRRRRRSGE 59
G+A +PR+ G P R S TVTS AS+ SA PT + RR
Sbjct: 28 GTAGNLPRRLPLAQGSPRCCRFCKGSVSTATVTSFGASAPGSADPTLGSTAARRASAPWA 87
Query: 60 AREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHD 119
G C + A AR P RRQS T + R A +SP + G H
Sbjct: 88 CPAGCCRAN------APAPARNPRRKEPRRQSRATGKSARTRRACASP-----CRPGRH- 135
Query: 120 RGACG-NTARRLLP-------GGGRLRSPRDPAWESGRRRPASGV----RVESGVLPVPG 167
CG TARR P GG R+ S P+ G RP+ V R S LP
Sbjct: 136 ---CGPETARRPRPLAGTTFCGGARVLSNPPPSGSGGDARPSPLVPRRCRATSASLPQET 192
Query: 168 PRGSRLSKLGGPHARSPHGNR-----VPQARSP 195
P LS + P RS R VP A+ P
Sbjct: 193 P--FALSVVWAPRRRSQGDARGRRTGVPCAKRP 223
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 43.9 bits (102), Expect = 1e-04
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 32/202 (15%)
Query: 2 GGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASS----RPSAPTPPPRSQRRRRRS 57
GG + P GPP R P+ + + A S R +PT P+ +
Sbjct: 465 GGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAP 524
Query: 58 GEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGP 117
+G SR G A AAR P + +RQ+ AT++ + + +P P
Sbjct: 525 PTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAP---------P 575
Query: 118 HDRGACGNTARRLLPGGGRLRS--PRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSK 175
GA P GG+ R P+ P +G R AS ++G +P GP ++ +
Sbjct: 576 KASGA---------PPGGQQRQGPPQKPPGPAGPTRQAS----QAGPVPRTGPPTTQQPR 622
Query: 176 LGGPHARSPHGNRVPQ-ARSPA 196
GP P G PQ A+ P+
Sbjct: 623 PSGP---GPAGRPKPQLAQKPS 641
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 43.9 bits (102), Expect = 1e-04
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 32/202 (15%)
Query: 2 GGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASS----RPSAPTPPPRSQRRRRRS 57
GG + P GPP R P+ + + A S R +PT P+ +
Sbjct: 465 GGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAP 524
Query: 58 GEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGP 117
+G SR G A AAR P + +RQ+ AT++ + + +P P
Sbjct: 525 PTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAP---------P 575
Query: 118 HDRGACGNTARRLLPGGGRLRS--PRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSK 175
GA P GG+ R P+ P +G R AS ++G +P GP ++ +
Sbjct: 576 KASGA---------PPGGQQRQGPPQKPPGPAGPTRQAS----QAGPVPRTGPPTTQQPR 622
Query: 176 LGGPHARSPHGNRVPQ-ARSPA 196
GP P G PQ A+ P+
Sbjct: 623 PSGP---GPAGRPKPQLAQKPS 641
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 42.4 bits (98), Expect = 4e-04
Identities = 65/248 (26%), Positives = 87/248 (35%), Gaps = 50/248 (20%)
Query: 2 GGSAKGMPRK---------AETGPPGVFRRMPR--SRPPRTVTSSSASSRPSAPTPPPRS 50
GGS G P++ A G PG P S P V +A++ APTPP R
Sbjct: 304 GGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAA---APTPPARG 360
Query: 51 QRRRRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPV-- 108
+ S R S+ GG A G R RR + A +R P
Sbjct: 361 ----KESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPP 416
Query: 109 --WTGLLQRGPHD------RGACGNT----ARRLLPGGGRLRSPRDPAWESGRRRPASGV 156
+ L R RGA G + R G G+ R P P+ G
Sbjct: 417 RGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGA 476
Query: 157 RVESGVLPVPGPRGSRLSKLGGPHARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRR 216
G GP G S+ GPH RS +R P ++ +R +K+P P R
Sbjct: 477 HGRRG-----GPEGKSSSRSPGPHPRSWSSSRSPS---------KSRSRSAEKRPHSPSR 522
Query: 217 LGWATPNP 224
+P+P
Sbjct: 523 ----SPSP 526
Score = 32.0 bits (71), Expect = 0.56
Identities = 43/161 (26%), Positives = 62/161 (38%), Gaps = 27/161 (16%)
Query: 3 GSAKGMPRKAETGPPGVF-RRMPRSRPPRTVTSSSASSRPSAP--TPPPRSQRRRRRSGE 59
G G K+ + PG R SR P S SA RP +P +P P+ R + GE
Sbjct: 478 GRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGE 537
Query: 60 AREGVCSRHC-GGLMAAGQAARTPVPDADRRQSA--------VTDATQRP---------- 100
R +RH A + +R+ P RR+ + +T A +RP
Sbjct: 538 GR----ARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSS 593
Query: 101 -AAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGRLRSP 140
++ SS T R P + G+ + R R RSP
Sbjct: 594 SSSCLSSDYSTRSHSRSPSPGHSHGSYSSRSHGTRSRTRSP 634
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 42.0 bits (97), Expect = 5e-04
Identities = 68/271 (25%), Positives = 98/271 (36%), Gaps = 60/271 (22%)
Query: 9 PRKAETGPPGVFRRM-PRSRPPRTVTSSSASSRPSAPT---PPPRSQRRRRRSGEA---- 60
P K + PP RR+ P + PPR S + P T P P+ R R+S +
Sbjct: 374 PPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPG 433
Query: 61 -REGVCSRH--------------------------CGGLMAAGQAARTPVPDADRRQSAV 93
G ++H GG MAA + + + Q +
Sbjct: 434 RTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSS 493
Query: 94 TDA-------TQRPAAAESSPVWTGLLQRGPHDRGACGNTARR---LLPGGGRLRSPRDP 143
+D+ +RP + G +R R A + +R P G R RSP P
Sbjct: 494 SDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPP 553
Query: 144 AWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHGNRVPQARSPALRSLETA 203
+ RRR S P P PR R + P R+P + P+ RSP+ R
Sbjct: 554 --PTRRRRSPS---------PAPPPR-RRRTPTPPPRRRTP--SPPPRRRSPSPRRYSPP 599
Query: 204 ARWRKKQPLGPRRLGWATPNPLPGHRGSLYP 234
+ R+ P P + A+P P P R S P
Sbjct: 600 IQ-RRYSPSPPPKRRTASPPPPPKRRASPSP 629
Score = 41.6 bits (96), Expect = 7e-04
Identities = 71/278 (25%), Positives = 97/278 (34%), Gaps = 62/278 (22%)
Query: 4 SAKGMPRKA--ETGPPGVFRRMPRSRPPRTVTSSSASSRP---SAPTPPPRSQ------R 52
SA PRK ET P G RR P P R S S + P PTPPPR + R
Sbjct: 528 SASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPR 587
Query: 53 RRRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQR-----PAAAESSP 107
RR S R + +P P RR S +R P SSP
Sbjct: 588 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSP 647
Query: 108 VWTGLLQRGP-----HDRGACGN----TARRLLPGGGRLRSPRDPAWESG---------- 148
V +R P H +G+ + AR P SPR A ++
Sbjct: 648 V---TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGA 704
Query: 149 ------RRRPASGVRVESGVLPVPGPRGSRLSKLGGP---------HARSPHGNRVPQAR 193
R+ P+ R V P P+ ++ K P +RS G+ P A+
Sbjct: 705 SSSPQRRQSPSPSTRPIRRVSRTPEPK--KIKKAASPSPQSVRRVSSSRSVSGSPEPAAK 762
Query: 194 SP-----ALRSLETAARWRKKQPLGPRRLGWATPNPLP 226
P ++S + W P+ ++ TP+P P
Sbjct: 763 KPPAPPSPVQSQSPSTNWSPAVPV--KKAKSPTPSPSP 798
Score = 34.3 bits (77), Expect = 0.11
Identities = 41/159 (25%), Positives = 55/159 (34%), Gaps = 12/159 (7%)
Query: 24 PRSRP-PRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQAARTP 82
PR RP PR S + P PPPR +R R R S ++ +R+P
Sbjct: 311 PRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSP 370
Query: 83 VPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARRLLP---GGGRLRS 139
+R S+ T+R + + S P +R A R P R R
Sbjct: 371 PKKPPKRTSSPPRKTRRLSPSASPP-----RRRHRPSPPATPPPKTRHSPTPQQSNRTRK 425
Query: 140 PR---DPAWESGRRRPASGVRVESGVLPVPGPRGSRLSK 175
R P SG+ G P P PR LS+
Sbjct: 426 SRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSE 464
>gi|169168296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/163 (30%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 100 PAAAESSPVWTGLLQRGPHDRGACGNTARR-LLPGGGRLRSPRDPAWESGRRRPASGVRV 158
PA E +P G P + R+ LLP G R+ DP E + G R+
Sbjct: 179 PAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTT-DPGQEV--QADCGGGRL 235
Query: 159 ESGVLPVPGPRGSRLSKLGGPHARSPHGN-RVPQARSPALRSLETAARWRKKQPLGPRRL 217
S LP PR + L P G + P AR + T K+P GP R
Sbjct: 236 ASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPAR- 294
Query: 218 GWATPNPLPGHRGSLYPAFSVLAALVEGSSLARPCALVEIPEE 260
+RGS P SV A+ EG L +P A PEE
Sbjct: 295 ----------NRGSCSPPLSVTLAVTEGPRLRKPSA----PEE 323
>gi|169168044 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/163 (30%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 100 PAAAESSPVWTGLLQRGPHDRGACGNTARR-LLPGGGRLRSPRDPAWESGRRRPASGVRV 158
PA E +P G P + R+ LLP G R+ DP E + G R+
Sbjct: 179 PAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTT-DPGQEV--QADCGGGRL 235
Query: 159 ESGVLPVPGPRGSRLSKLGGPHARSPHGN-RVPQARSPALRSLETAARWRKKQPLGPRRL 217
S LP PR + L P G + P AR + T K+P GP R
Sbjct: 236 ASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPAR- 294
Query: 218 GWATPNPLPGHRGSLYPAFSVLAALVEGSSLARPCALVEIPEE 260
+RGS P SV A+ EG L +P A PEE
Sbjct: 295 ----------NRGSCSPPLSVTLAVTEGPRLRKPSA----PEE 323
>gi|169167512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 442
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/163 (30%), Positives = 62/163 (38%), Gaps = 20/163 (12%)
Query: 100 PAAAESSPVWTGLLQRGPHDRGACGNTARR-LLPGGGRLRSPRDPAWESGRRRPASGVRV 158
PA E +P G P + R+ LLP G R+ DP E + G R+
Sbjct: 262 PAEVEGAPPLPGKDDGSPKEAEERARRFRKPLLPPGWSPRTT-DPGQEV--QADCGGGRL 318
Query: 159 ESGVLPVPGPRGSRLSKLGGPHARSPHGN-RVPQARSPALRSLETAARWRKKQPLGPRRL 217
S LP PR + L P G + P AR + T K+P GP R
Sbjct: 319 ASAQLPQGLPRSAGLPAREQPPPTQSRGRLQSPCAREASTSPALTPRSQYPKRPQGPAR- 377
Query: 218 GWATPNPLPGHRGSLYPAFSVLAALVEGSSLARPCALVEIPEE 260
+RGS P SV A+ EG L +P A PEE
Sbjct: 378 ----------NRGSCSPPLSVTLAVTEGPRLRKPSA----PEE 406
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 40.0 bits (92), Expect = 0.002
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 125 NTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSP 184
++ R LP L SPR P + GR P + S L + PR SR S G H SP
Sbjct: 518 SSERESLPESLELSSPRSPETDWGRP-PGGDKDLASPHLGLGSPRVSRASSPEGRHLPSP 576
Query: 185 H-GNRVPQARSPALRSLETAARWRKKQPLG 213
G + P AR P + + E R R+ Q G
Sbjct: 577 QLGTKAPVAR-PRMSAQEQLERMRRNQECG 605
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 40.0 bits (92), Expect = 0.002
Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 12/115 (10%)
Query: 117 PHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKL 176
P G+ G+T + PG ++ P PA E G+R G R E G +PGP G R
Sbjct: 436 PGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKR----GARGEPGPTGLPGPPGER---- 487
Query: 177 GGPHARS-PHGNRVPQARSPALRSLETAARWRKKQPLGPRRLGWATPNPLPGHRG 230
GGP +R P + V + PA K P R G A LPG +G
Sbjct: 488 GGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEA---GLPGAKG 539
Score = 36.6 bits (83), Expect = 0.023
Identities = 39/119 (32%), Positives = 48/119 (40%), Gaps = 9/119 (7%)
Query: 121 GACGNTARRLLPGGGRLRSPRDPAWESGRRRPAS--GVRVESGVLPVPGPRGSRLSKLGG 178
GA G T PG P PA + GR P G R ++GV+ PGP+G+ G
Sbjct: 536 GAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGA----AGE 591
Query: 179 PHARSPHG-NRVPQARSPALRSLETAARWRKKQPLGPR-RLGWATPNPLPGHRGSLYPA 235
P G P A PA + E A+ P GP G P PG +G PA
Sbjct: 592 PGKAGERGVPGPPGAVGPAGKDGEAGAQ-GPPGPAGPAGERGEQGPAGSPGFQGLPGPA 649
Score = 32.0 bits (71), Expect = 0.56
Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 98 QRPAAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVR 157
+R A E P TGL P G G R PG + P+ PA E G PA G +
Sbjct: 468 KRGARGEPGP--TGL----PGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPA-GPK 520
Query: 158 VESGVLPVPGPRGSRLSK--LGGPHARSPHGNRVP 190
G PG G +K G P + P G P
Sbjct: 521 GSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGP 555
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 40.0 bits (92), Expect = 0.002
Identities = 60/229 (26%), Positives = 78/229 (34%), Gaps = 35/229 (15%)
Query: 18 GVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAA-- 75
G F P+S+PP +++ + +P PP R R G R SR G A
Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREG-PRGRAESRGSGPAQPAHL 246
Query: 76 ---GQAARTPVPDADRRQSAVTDAT-------QRPAAAESSPVWTGLLQRGPHDRGA--- 122
G A P + R+ +T + P AAE S T L+RG DR
Sbjct: 247 PLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQ 306
Query: 123 ----------CGNTARRLLPGGG----RLRSPRDPAWESGRRRPASGVRVESGVLPVPGP 168
C RR GGG + PA GRR V + VL
Sbjct: 307 PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE---EVGAAVLRAGSG 363
Query: 169 RGSRLSKLGGPHARSPHG--NRVPQARSPALRSLETAARWRKKQPLGPR 215
GSR P R HG R R+ + T R+ GP+
Sbjct: 364 EGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 412
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 40.0 bits (92), Expect = 0.002
Identities = 60/229 (26%), Positives = 78/229 (34%), Gaps = 35/229 (15%)
Query: 18 GVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAA-- 75
G F P+S+PP +++ + +P PP R R G R SR G A
Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREG-PRGRAESRGSGPAQPAHL 246
Query: 76 ---GQAARTPVPDADRRQSAVTDAT-------QRPAAAESSPVWTGLLQRGPHDRGA--- 122
G A P + R+ +T + P AAE S T L+RG DR
Sbjct: 247 PLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQ 306
Query: 123 ----------CGNTARRLLPGGG----RLRSPRDPAWESGRRRPASGVRVESGVLPVPGP 168
C RR GGG + PA GRR V + VL
Sbjct: 307 PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE---EVGAAVLRAGSG 363
Query: 169 RGSRLSKLGGPHARSPHG--NRVPQARSPALRSLETAARWRKKQPLGPR 215
GSR P R HG R R+ + T R+ GP+
Sbjct: 364 EGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 412
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 40.0 bits (92), Expect = 0.002
Identities = 62/219 (28%), Positives = 75/219 (34%), Gaps = 43/219 (19%)
Query: 33 TSSSASSRPSAP----TPPPRSQRRRR------RSGEAREGVCSRHCG-GLMAAGQAA-- 79
T A + S P +PPPR QR RR + R C+R G G G AA
Sbjct: 361 TRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPPCARPSGAGPAREGPAAWP 420
Query: 80 -RTPVPDADRRQSAVTDATQRPAAAESSPVWTG-----LLQRGPHDRGACGNTARRLLPG 133
P P R D P A P +G RG D G RR G
Sbjct: 421 GGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRG-WDPGGGSRARRRAARG 479
Query: 134 GGRLRSPRDP--AWESGRRRPASGVRVESGVLPVPGPRGSR-----------LSKLGGPH 180
G LRS R A G R +R +G P R R LS+ G +
Sbjct: 480 RGCLRSARSSPHARPLGSSRSVRLLRSAAGKGPSLDSREVRVLIERGCQWWFLSRNGVDY 539
Query: 181 ARSPHGNRVPQARSP----------ALRSLETAARWRKK 209
P + AR+P R+L+ RWRKK
Sbjct: 540 TTGPRSEQRGLARAPLPREDLLPGHTCRALDVPHRWRKK 578
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 40.0 bits (92), Expect = 0.002
Identities = 60/229 (26%), Positives = 78/229 (34%), Gaps = 35/229 (15%)
Query: 18 GVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAA-- 75
G F P+S+PP +++ + +P PP R R G R SR G A
Sbjct: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREG-PRGRAESRGSGPAQPAHL 246
Query: 76 ---GQAARTPVPDADRRQSAVTDAT-------QRPAAAESSPVWTGLLQRGPHDRGA--- 122
G A P + R+ +T + P AAE S T L+RG DR
Sbjct: 247 PLPGPAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQ 306
Query: 123 ----------CGNTARRLLPGGG----RLRSPRDPAWESGRRRPASGVRVESGVLPVPGP 168
C RR GGG + PA GRR V + VL
Sbjct: 307 PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE---EVGAAVLRAGSG 363
Query: 169 RGSRLSKLGGPHARSPHG--NRVPQARSPALRSLETAARWRKKQPLGPR 215
GSR P R HG R R+ + T R+ GP+
Sbjct: 364 EGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 412
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.7 bits (91), Expect = 0.003
Identities = 49/228 (21%), Positives = 77/228 (33%), Gaps = 32/228 (14%)
Query: 8 MPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSR 67
M K + G R P +R P +T S P P + R +G +
Sbjct: 1 MDNKRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAE 60
Query: 68 HCGGL---------------MAAGQAARTPV---PDADRRQSAVTDATQRPAAAESSPVW 109
GG+ +AG ++R P P + R + A P S
Sbjct: 61 RAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA 120
Query: 110 TGLLQRGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPG-- 167
+G + GP + +A + G +P+ A +G RR SG P PG
Sbjct: 121 SGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSG--------PTPGTP 172
Query: 168 -PRGSRLSKLGGPHARSPHGNRVPQARSPA---LRSLETAARWRKKQP 211
P +R S+ G P + R P +S+ +A+ +P
Sbjct: 173 SPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP 220
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 39.7 bits (91), Expect = 0.003
Identities = 49/228 (21%), Positives = 77/228 (33%), Gaps = 32/228 (14%)
Query: 8 MPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSR 67
M K + G R P +R P +T S P P + R +G +
Sbjct: 1 MDNKRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAE 60
Query: 68 HCGGL---------------MAAGQAARTPV---PDADRRQSAVTDATQRPAAAESSPVW 109
GG+ +AG ++R P P + R + A P S
Sbjct: 61 RAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA 120
Query: 110 TGLLQRGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPG-- 167
+G + GP + +A + G +P+ A +G RR SG P PG
Sbjct: 121 SGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSG--------PTPGTP 172
Query: 168 -PRGSRLSKLGGPHARSPHGNRVPQARSPA---LRSLETAARWRKKQP 211
P +R S+ G P + R P +S+ +A+ +P
Sbjct: 173 SPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP 220
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 39.7 bits (91), Expect = 0.003
Identities = 62/219 (28%), Positives = 75/219 (34%), Gaps = 43/219 (19%)
Query: 33 TSSSASSRPSAP----TPPPRSQRRRR------RSGEAREGVCSRHCG-GLMAAGQAA-- 79
T A + S P +PPPR QR RR + R C+R G G G AA
Sbjct: 361 TRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPPCARPSGAGPAREGPAAWP 420
Query: 80 -RTPVPDADRRQSAVTDATQRPAAAESSPVWTG-----LLQRGPHDRGACGNTARRLLPG 133
P P R D P A P +G RG D G RR G
Sbjct: 421 GGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRG-WDPGGGSRARRRAARG 479
Query: 134 GGRLRSPRDP--AWESGRRRPASGVRVESGVLPVPGPRGSR-----------LSKLGGPH 180
G LRS R A G R +R +G P R R LS+ G +
Sbjct: 480 RGCLRSARSSPHARPLGSSRSVRLLRSAAGRGPSLDSREVRVLIERGCQWWFLSRNGVDY 539
Query: 181 ARSPHGNRVPQARSP----------ALRSLETAARWRKK 209
P + AR+P R+L+ RWRKK
Sbjct: 540 TTGPRSEQRGLARAPLPREDLLPGHTCRALDVPHRWRKK 578
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 39.7 bits (91), Expect = 0.003
Identities = 60/234 (25%), Positives = 76/234 (32%), Gaps = 28/234 (11%)
Query: 2 GGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRR----RRS 57
GG A P+ A T PP V P+ P T AS+ P+A P P+ + +
Sbjct: 998 GGPATPSPKGAPT-PPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGA 1056
Query: 58 GEAREGVCSRHCGGLMAAG-------QAARTPVPDADRRQSAVTDATQRPAAAESSPVWT 110
GG AA P P + A PAA SP
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP--K 1114
Query: 111 GLLQRGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRG 170
G L PH A P GG P A + P S G L P P+G
Sbjct: 1115 GGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPS----PKGGLATPPPKG 1170
Query: 171 SRLSKLGGPHARSPHGNRVPQARSPALRSLETAARWRKKQPLGPRRLGWATPNP 224
+ + P SP G +P+ + T P G G ATP+P
Sbjct: 1171 APTTPAATP--PSPKGG----LATPSPKGAPTTPAATPPSPKG----GLATPSP 1214
Score = 35.0 bits (79), Expect = 0.066
Identities = 60/233 (25%), Positives = 76/233 (32%), Gaps = 49/233 (21%)
Query: 2 GGSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPP---PRSQRRRRRSG 58
GG A P+ A T P PP + S APTPP P S + +
Sbjct: 952 GGPATPSPKWAPTPPAAT--------PPSPKGGPATPSPKGAPTPPAATPPSPKGGPATP 1003
Query: 59 EAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPH 118
+ G A TP P + A T P + + SP T P
Sbjct: 1004 SPKGAPTPPAVTPPSPKGSPAATPFP-----KGASTPPAATPPSPKGSPAAT------PL 1052
Query: 119 DRGACGNTARRL-LPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLG 177
+GA A L P GG P P+ + PA+ P P+ G
Sbjct: 1053 PKGAPTTPAATLPSPKGG----PATPSLKGAPTPPAA---------TPPSPK-------G 1092
Query: 178 GPHARSPHGNRVPQARSPALRSLETAARWRKKQPLGPR------RLGWATPNP 224
GP SP G +P A +P A K P P + G ATP P
Sbjct: 1093 GPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPP 1145
Score = 33.9 bits (76), Expect = 0.15
Identities = 50/202 (24%), Positives = 61/202 (30%), Gaps = 38/202 (18%)
Query: 4 SAKGMPRKAETGPP---GVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA 60
S KG P PP G P P T ++ S + TPPP+
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGA--------- 1148
Query: 61 REGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDR 120
AA P P A PAA SP GL P +
Sbjct: 1149 -------------PTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG-GLATPSP--K 1192
Query: 121 GACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRL------- 173
GA A G L +P + PA+ G L P P+G+
Sbjct: 1193 GAPTTPAATPPSPKGGLATPSP---KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1249
Query: 174 SKLGGPHARSPHGNRVPQARSP 195
S GGP P G P A +P
Sbjct: 1250 SPKGGPATPPPKGAPTPPAATP 1271
Score = 33.9 bits (76), Expect = 0.15
Identities = 54/236 (22%), Positives = 80/236 (33%), Gaps = 35/236 (14%)
Query: 6 KGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPS------------APTPPPRSQRR 53
KG P A PP + P + PP+ + A++ PS APTPP +
Sbjct: 1284 KGAPNPAVVTPPSP-KGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPS 1342
Query: 54 RRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLL 113
+ + S G + + TP +A PA SP
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTP-------PAATPSHKGGPAMTPPSP------ 1389
Query: 114 QRGPHDRGACGN-TARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSR 172
+RGP G+ T+ ++P + ++P P G P+ G V PV +
Sbjct: 1390 KRGPAIPSPKGDPTSPAVIPLSPK-KAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPA 1448
Query: 173 LS-KLGGPHARSPHGNRV------PQARSPALRSLETAARWRKKQPLGPRRLGWAT 221
S GGP S G+ P + P + KK P P +G T
Sbjct: 1449 TSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPT 1504
Score = 30.0 bits (66), Expect = 2.1
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 13/122 (10%)
Query: 82 PVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGA-CGNTARRLLPGGGRLRSP 140
P A ++ A++ + P A ++P G+ P +GA A P GG P
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGI-PASPSPKGAPTPPAATPPSPKGG----P 954
Query: 141 RDPAWESGRRRPASGVRVESGVLPVPGPRGSRL-------SKLGGPHARSPHGNRVPQAR 193
P+ + PA+ G P P+G+ S GGP SP G P A
Sbjct: 955 ATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAV 1014
Query: 194 SP 195
+P
Sbjct: 1015 TP 1016
>gi|169160624 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 39.3 bits (90), Expect = 0.004
Identities = 43/150 (28%), Positives = 54/150 (36%), Gaps = 36/150 (24%)
Query: 70 GGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARR 129
GG A G A T +R RP +SP+ LL P RG C +
Sbjct: 149 GGARAGGGEALTR-----KRARGGAVPGDRPGGGAASPLPAPLLASRPRPRGRCAPDGAQ 203
Query: 130 LLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHG-NR 188
G RLR RRR SG L GP+A+ HG N+
Sbjct: 204 AGVGASRLR----------RRRAPSGT-------------------LNGPYAQDKHGLNQ 234
Query: 189 VPQARSPALRSLETAARWR-KKQPLGPRRL 217
V AL + TA + K + LGP+ L
Sbjct: 235 VHAPAGDALTEVRTAVPGQVKPRTLGPKNL 264
>gi|113412136 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 39.3 bits (90), Expect = 0.004
Identities = 43/150 (28%), Positives = 54/150 (36%), Gaps = 36/150 (24%)
Query: 70 GGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARR 129
GG A G A T +R RP +SP+ LL P RG C +
Sbjct: 16 GGARAGGGEALTR-----KRARGGAVPGDRPGGGAASPLPAPLLASRPRPRGRCAPDGAQ 70
Query: 130 LLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHG-NR 188
G RLR RRR SG L GP+A+ HG N+
Sbjct: 71 AGVGASRLR----------RRRAPSGT-------------------LNGPYAQDKHGLNQ 101
Query: 189 VPQARSPALRSLETAARWR-KKQPLGPRRL 217
V AL + TA + K + LGP+ L
Sbjct: 102 VHAPAGDALTEVRTAVPGQVKPRTLGPKNL 131
>gi|113408483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 39.3 bits (90), Expect = 0.004
Identities = 43/150 (28%), Positives = 54/150 (36%), Gaps = 36/150 (24%)
Query: 70 GGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARR 129
GG A G A T +R RP +SP+ LL P RG C +
Sbjct: 16 GGARAGGGEALTR-----KRARGGAVPGDRPGGGAASPLPAPLLASRPRPRGRCAPDGAQ 70
Query: 130 LLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHG-NR 188
G RLR RRR SG L GP+A+ HG N+
Sbjct: 71 AGVGASRLR----------RRRAPSGT-------------------LNGPYAQDKHGLNQ 101
Query: 189 VPQARSPALRSLETAARWR-KKQPLGPRRL 217
V AL + TA + K + LGP+ L
Sbjct: 102 VHAPAGDALTEVRTAVPGQVKPRTLGPKNL 131
>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
[Homo sapiens]
Length = 1130
Score = 38.9 bits (89), Expect = 0.005
Identities = 47/179 (26%), Positives = 62/179 (34%), Gaps = 6/179 (3%)
Query: 5 AKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGV 64
A G+P K E G G P + P T TS + S P + P + R RR + E
Sbjct: 827 ASGLPHKEEAG-KGSALGTPAAAEPVTPTSKAGSGAPGGTSKGPAEESRVRRHKHSSESP 885
Query: 65 CSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACG 124
R G L A P P A A +Q P+ + G + A
Sbjct: 886 -GRDKGKLSRLKPA--PPPPPAASAGKAGGKPSQSPSQEAAGEAVLGAKTKATSLVDAVN 942
Query: 125 NTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARS 183
+ A + G L+ P PA + SG + PVP S S L G S
Sbjct: 943 SDAAKPSQPGEGLKKPVLPATPKPQSAKPSGTPISPA--PVPSTLPSASSALAGDQPSS 999
Score = 37.0 bits (84), Expect = 0.017
Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 34/203 (16%)
Query: 8 MPRKAETGPPGVF----RRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
+PRK P G R +P+ + ++ + +APTPP RS R G+
Sbjct: 572 LPRKERGPPEGGLNEDERLLPKDKKTNLFSALIKKKKKTAPTPPKRSSSFREMDGQPERR 631
Query: 64 VCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGAC 123
G ++ G A TP+ AD +S P + + V G L+
Sbjct: 632 GAGEEEGRDISNGALAFTPLDTADPAKS--------PKPSNGAGVPNGALRES------- 676
Query: 124 GNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARS 183
GG RSP W+ +S R+ +G G R +
Sbjct: 677 ---------GGSGFRSPH--LWKKSSTLTSS--RLATGEEEGGGSSSKRFLRSCSASC-V 722
Query: 184 PHGNRVPQARSPAL-RSLETAAR 205
PHG + + RS L R L++ R
Sbjct: 723 PHGAKDTEWRSVTLPRDLQSTGR 745
>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
[Homo sapiens]
Length = 1149
Score = 38.9 bits (89), Expect = 0.005
Identities = 47/179 (26%), Positives = 62/179 (34%), Gaps = 6/179 (3%)
Query: 5 AKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGV 64
A G+P K E G G P + P T TS + S P + P + R RR + E
Sbjct: 846 ASGLPHKEEAG-KGSALGTPAAAEPVTPTSKAGSGAPGGTSKGPAEESRVRRHKHSSESP 904
Query: 65 CSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACG 124
R G L A P P A A +Q P+ + G + A
Sbjct: 905 -GRDKGKLSRLKPA--PPPPPAASAGKAGGKPSQSPSQEAAGEAVLGAKTKATSLVDAVN 961
Query: 125 NTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARS 183
+ A + G L+ P PA + SG + PVP S S L G S
Sbjct: 962 SDAAKPSQPGEGLKKPVLPATPKPQSAKPSGTPISPA--PVPSTLPSASSALAGDQPSS 1018
Score = 37.0 bits (84), Expect = 0.017
Identities = 48/203 (23%), Positives = 73/203 (35%), Gaps = 34/203 (16%)
Query: 8 MPRKAETGPPGVF----RRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREG 63
+PRK P G R +P+ + ++ + +APTPP RS R G+
Sbjct: 591 LPRKERGPPEGGLNEDERLLPKDKKTNLFSALIKKKKKTAPTPPKRSSSFREMDGQPERR 650
Query: 64 VCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGAC 123
G ++ G A TP+ AD +S P + + V G L+
Sbjct: 651 GAGEEEGRDISNGALAFTPLDTADPAKS--------PKPSNGAGVPNGALRES------- 695
Query: 124 GNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARS 183
GG RSP W+ +S R+ +G G R +
Sbjct: 696 ---------GGSGFRSPH--LWKKSSTLTSS--RLATGEEEGGGSSSKRFLRSCSASC-V 741
Query: 184 PHGNRVPQARSPAL-RSLETAAR 205
PHG + + RS L R L++ R
Sbjct: 742 PHGAKDTEWRSVTLPRDLQSTGR 764
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 38.9 bits (89), Expect = 0.005
Identities = 67/241 (27%), Positives = 88/241 (36%), Gaps = 34/241 (14%)
Query: 38 SSRPSAPTPPPRSQRRRRRSGEAREGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDAT 97
++R AP P R+R+G A G G ARTP A RR + D
Sbjct: 90 AARLRAPARDPVPLAGRQRAGAAPRG-----------PGGPARTPAVRAGRRAA---DGP 135
Query: 98 QRPAAAESSPVWTGLLQ-RGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGV 156
A A ++GL Q RGP R A LP G R P E R R S +
Sbjct: 136 GEEAPAPGRARFSGLSQPRGPQPRAAVRPRRGGALPRGTGAVPERGPGTEPQRGRRCSDL 195
Query: 157 RVESGVL----PVPGPRGSRLSKL---GGPHARSPHGNRVPQARSPALRSLETAAR---W 206
+ G L P RG R G + Q + L+ LE AR W
Sbjct: 196 QGLGGRLRGCPAGPSARGERQRHTITSGVDCGLLKQMKELEQEKEVLLQGLEMMARGRDW 255
Query: 207 RKKQPLGPR----RLGWATPNPLPGHRGSLYPAFSVLAALVE-----GSSLARPCALVEI 257
++Q + RLG + + G GS P +L+ + E G LA CA +
Sbjct: 256 YQQQLQRVQERQCRLGQSRASADFGATGSPRPLGRLLSKVQEVTRCLGELLAAACASWAL 315
Query: 258 P 258
P
Sbjct: 316 P 316
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.005
Identities = 47/219 (21%), Positives = 73/219 (33%), Gaps = 23/219 (10%)
Query: 8 MPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEAREGVCSR 67
M K + G R P +R P +T S P P + R +G +
Sbjct: 1 MDNKRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAE 60
Query: 68 HCGGL---------MAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPH 118
GG+ AG + P + R + A P S +G + GP
Sbjct: 61 RAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL 120
Query: 119 DRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPG---PRGSRLSK 175
+ +A + G +P+ A +G RR SG P PG P +R S+
Sbjct: 121 GQKGLRISAEETVARGKATEAPKRSALSAGARRDTSG--------PTPGTPSPAMARRSR 172
Query: 176 LGGPHARSPHGNRVPQARSPA---LRSLETAARWRKKQP 211
G P + R P +S+ +A+ +P
Sbjct: 173 AAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP 211
Score = 28.1 bits (61), Expect = 8.1
Identities = 58/235 (24%), Positives = 80/235 (34%), Gaps = 36/235 (15%)
Query: 3 GSAKGMPRKAETGPPGVFRRMPRSRPPRTVTSSSASSRPSAPTPPPRSQRRRRRS-GEAR 61
G+ G+PR A + P R P P ++V+S+S S T P RRR S G
Sbjct: 175 GTEVGLPRPAPSARP----RPPTEGPRKSVSSASEHS-----TTEPSPAARRRPSAGGGL 225
Query: 62 EGVCSRHCGGLMAAGQAARTPVPDADRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRG 121
+ SR ++ TP+ + R T R A S P GL P
Sbjct: 226 QRPASRSL-------SSSATPL-SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVT 277
Query: 122 ACGNTARRLLPGGGRLRSPRDPAWESGRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHA 181
A L G SP S P++ +++ P P + LG P
Sbjct: 278 PPRKDAAPAL--GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTL 335
Query: 182 RSPHGNRVPQARSP------------ALRSLETAARWRKKQPLGPRRLGWATPNP 224
++ H SP AL L+ PL P ATP+P
Sbjct: 336 QATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP----LATPSP 386
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 38.5 bits (88), Expect = 0.006
Identities = 42/140 (30%), Positives = 50/140 (35%), Gaps = 8/140 (5%)
Query: 88 RRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGRLRSPRDPAWES 147
R +A DA AAA P+ + GP R +C RR G RL PA
Sbjct: 40 RGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPY 99
Query: 148 GRRRPASGVRVESGVLPVPGPRGSRLSKLGGPHARSPHGNRVPQARSPALRS-LETAARW 206
RP G R + + P P S L P SP P AR R+ L +
Sbjct: 100 HSARPGGGARARAARVSPPTPPRSGLD----PAVPSP--TPAPLARCRQTRAGLRLSTGG 153
Query: 207 RKKQPLGPRRLG-WATPNPL 225
R PL G W P L
Sbjct: 154 RLSPPLRRAASGEWKRPGGL 173
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,172,241
Number of Sequences: 37866
Number of extensions: 908211
Number of successful extensions: 7674
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 527
Number of HSP's that attempted gapping in prelim test: 6637
Number of HSP's gapped (non-prelim): 1396
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.