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Search of human proteins with 239748977
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748977 PREDICTED: hypothetical protein XP_002346843 [Homo
sapiens]
(106 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748977 PREDICTED: hypothetical protein XP_002346843 [Homo ... 226 2e-60
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 44 4e-05
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 44 4e-05
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 44 4e-05
gi|157168329 formin 1 [Homo sapiens] 43 6e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 42 1e-04
gi|31652264 RNA binding motif protein 26 [Homo sapiens] 41 2e-04
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 41 2e-04
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 41 2e-04
gi|210032580 SET domain containing 1B [Homo sapiens] 41 2e-04
gi|153792074 proline rich 12 [Homo sapiens] 40 4e-04
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 39 7e-04
gi|40548415 dishevelled associated activator of morphogenesis 2 ... 39 7e-04
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 39 0.001
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 39 0.001
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 39 0.001
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi... 39 0.001
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi... 39 0.001
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi... 39 0.001
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi... 39 0.001
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi... 39 0.001
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ... 39 0.001
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ... 39 0.001
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ... 39 0.001
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ... 39 0.001
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s... 39 0.001
gi|118572599 formin homology 2 domain containing 1 [Homo sapiens] 39 0.001
gi|4557329 fas ligand [Homo sapiens] 39 0.001
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 39 0.001
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 39 0.001
>gi|239748977 PREDICTED: hypothetical protein XP_002346843 [Homo
sapiens]
Length = 106
Score = 226 bits (577), Expect = 2e-60
Identities = 106/106 (100%), Positives = 106/106 (100%)
Query: 1 MRSKPISITKDIRTSSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELL 60
MRSKPISITKDIRTSSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELL
Sbjct: 1 MRSKPISITKDIRTSSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELL 60
Query: 61 PEPPGVLLPPEPPGVLLPPLCLGLQSRKCWFVPFIWWPAAGCKSGM 106
PEPPGVLLPPEPPGVLLPPLCLGLQSRKCWFVPFIWWPAAGCKSGM
Sbjct: 61 PEPPGVLLPPEPPGVLLPPLCLGLQSRKCWFVPFIWWPAAGCKSGM 106
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/36 (55%), Positives = 21/36 (58%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PPPLLL P PPP + P PP VL PP L P
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Score = 36.6 bits (83), Expect = 0.004
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 44 PLPPPLLLLPAPPPELL-PEPPGVLLPPEPP--GVLLPPLCLGLQS 86
PLP P P PPP LL P PP + PP PP L PP L S
Sbjct: 162 PLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPS 207
Score = 35.0 bits (79), Expect = 0.013
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 10 KDIRTSSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAP-PPELLPEPPGVLL 68
K++ +SS+ + ++ L S+ L +P PPP PAP PP+ + EPPG
Sbjct: 106 KEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPG---PAPGPPQDISEPPGGSP 162
Query: 69 PPEPPGVLLPP 79
P PP PP
Sbjct: 163 LPSPPSTAPPP 173
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PP LP+PP P PP +L PP PP + PP
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPP 190
Score = 30.8 bits (68), Expect = 0.25
Identities = 15/36 (41%), Positives = 15/36 (41%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP L P PPP P PP P L PP
Sbjct: 217 PAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Score = 28.9 bits (63), Expect = 0.94
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 14/75 (18%)
Query: 19 KSVSMTLGGSIAAGTWATEAGMLPL---PLPPPLLLLPAP-------PPELLPEP----P 64
+ +S GGS +T PL P PPP + P P PP L P P
Sbjct: 152 QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP 211
Query: 65 GVLLPPEPPGVLLPP 79
+PP PP L P
Sbjct: 212 PDFIPPAPPLAFLAP 226
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 47 PPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
PP + PAPP L PP + P PP P
Sbjct: 211 PPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 45 LPPPLLLLPAPPPELLPE----PPGVLLPPEPPGVLLPP 79
L P +L PA PP+ PE P L P PP L P
Sbjct: 631 LQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGP 669
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 44 PLPPPLLLLPAPPPELLPEPP 64
PLPPP LP P P L P P
Sbjct: 395 PLPPPAPPLPPPAPPLPPAAP 415
Score = 26.9 bits (58), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPP 73
PPP LP P P L PP LPP P
Sbjct: 390 PPPAPPLPPPAPPL--PPPAPPLPPAAP 415
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPP 73
P P P L PAPP LP P L P PP
Sbjct: 390 PPPAPPLPPPAPP---LPPPAPPLPPAAPP 416
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 42 PLPLPPPLLLLPAPP-PELLPEPPGVLLPPEPP 73
PLP P P L PAPP P P P PP
Sbjct: 395 PLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPP 427
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/36 (55%), Positives = 21/36 (58%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PPPLLL P PPP + P PP VL PP L P
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Score = 36.6 bits (83), Expect = 0.004
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 44 PLPPPLLLLPAPPPELL-PEPPGVLLPPEPP--GVLLPPLCLGLQS 86
PLP P P PPP LL P PP + PP PP L PP L S
Sbjct: 162 PLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPS 207
Score = 35.0 bits (79), Expect = 0.013
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 10 KDIRTSSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAP-PPELLPEPPGVLL 68
K++ +SS+ + ++ L S+ L +P PPP PAP PP+ + EPPG
Sbjct: 106 KEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPG---PAPGPPQDISEPPGGSP 162
Query: 69 PPEPPGVLLPP 79
P PP PP
Sbjct: 163 LPSPPSTAPPP 173
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PP LP+PP P PP +L PP PP + PP
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPP 190
Score = 30.8 bits (68), Expect = 0.25
Identities = 15/36 (41%), Positives = 15/36 (41%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP L P PPP P PP P L PP
Sbjct: 217 PAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Score = 28.9 bits (63), Expect = 0.94
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 14/75 (18%)
Query: 19 KSVSMTLGGSIAAGTWATEAGMLPL---PLPPPLLLLPAP-------PPELLPEP----P 64
+ +S GGS +T PL P PPP + P P PP L P P
Sbjct: 152 QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP 211
Query: 65 GVLLPPEPPGVLLPP 79
+PP PP L P
Sbjct: 212 PDFIPPAPPLAFLAP 226
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 47 PPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
PP + PAPP L PP + P PP P
Sbjct: 211 PPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 45 LPPPLLLLPAPPPELLPE----PPGVLLPPEPPGVLLPP 79
L P +L PA PP+ PE P L P PP L P
Sbjct: 631 LQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGP 669
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 44 PLPPPLLLLPAPPPELLPEPP 64
PLPPP LP P P L P P
Sbjct: 395 PLPPPAPPLPPPAPPLPPAAP 415
Score = 26.9 bits (58), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPP 73
PPP LP P P L PP LPP P
Sbjct: 390 PPPAPPLPPPAPPL--PPPAPPLPPAAP 415
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPP 73
P P P L PAPP LP P L P PP
Sbjct: 390 PPPAPPLPPPAPP---LPPPAPPLPPAAPP 416
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 42 PLPLPPPLLLLPAPP-PELLPEPPGVLLPPEPP 73
PLP P P L PAPP P P P PP
Sbjct: 395 PLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPP 427
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 43.5 bits (101), Expect = 4e-05
Identities = 20/36 (55%), Positives = 21/36 (58%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PPPLLL P PPP + P PP VL PP L P
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSP 206
Score = 36.6 bits (83), Expect = 0.004
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 44 PLPPPLLLLPAPPPELL-PEPPGVLLPPEPP--GVLLPPLCLGLQS 86
PLP P P PPP LL P PP + PP PP L PP L S
Sbjct: 162 PLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPS 207
Score = 35.0 bits (79), Expect = 0.013
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 10 KDIRTSSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAP-PPELLPEPPGVLL 68
K++ +SS+ + ++ L S+ L +P PPP PAP PP+ + EPPG
Sbjct: 106 KEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPG---PAPGPPQDISEPPGGSP 162
Query: 69 PPEPPGVLLPP 79
P PP PP
Sbjct: 163 LPSPPSTAPPP 173
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PP LP+PP P PP +L PP PP + PP
Sbjct: 157 PPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPP 190
Score = 30.8 bits (68), Expect = 0.25
Identities = 15/36 (41%), Positives = 15/36 (41%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP L P PPP P PP P L PP
Sbjct: 217 PAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPP 252
Score = 28.9 bits (63), Expect = 0.94
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 14/75 (18%)
Query: 19 KSVSMTLGGSIAAGTWATEAGMLPL---PLPPPLLLLPAP-------PPELLPEP----P 64
+ +S GGS +T PL P PPP + P P PP L P P
Sbjct: 152 QDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTP 211
Query: 65 GVLLPPEPPGVLLPP 79
+PP PP L P
Sbjct: 212 PDFIPPAPPLAFLAP 226
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 47 PPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
PP + PAPP L PP + P PP P
Sbjct: 211 PPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 45 LPPPLLLLPAPPPELLPE----PPGVLLPPEPPGVLLPP 79
L P +L PA PP+ PE P L P PP L P
Sbjct: 631 LQPKAMLGPAIPPKATPEPAIPPKATLWPATPPKATLGP 669
Score = 27.7 bits (60), Expect = 2.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 44 PLPPPLLLLPAPPPELLPEPP 64
PLPPP LP P P L P P
Sbjct: 395 PLPPPAPPLPPPAPPLPPAAP 415
Score = 26.9 bits (58), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPP 73
PPP LP P P L PP LPP P
Sbjct: 390 PPPAPPLPPPAPPL--PPPAPPLPPAAP 415
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPP 73
P P P L PAPP LP P L P PP
Sbjct: 390 PPPAPPLPPPAPP---LPPPAPPLPPAAPP 416
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 42 PLPLPPPLLLLPAPP-PELLPEPPGVLLPPEPP 73
PLP P P L PAPP P P P PP
Sbjct: 395 PLPPPAPPLPPPAPPLPPAAPPLPCAQKAAHPP 427
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 42.7 bits (99), Expect = 6e-05
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 36 TEAGMLPLPLPPPLLLLPAPP----PELLPEPPGVLLPPEPPGVLLPPLCLGLQSRKC 89
+ AG P P PPPL PAPP P P PPG L PP PPG+ LG S +C
Sbjct: 694 SSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPG-LAPPPPPGLFFG---LGSSSSQC 747
Score = 32.7 bits (73), Expect = 0.065
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 44 PLPP----PLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P+PP P L P PPP LP P PP PP LP
Sbjct: 670 PMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLP 708
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 43 LPLPPPL-----LLLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLG 83
+P PPPL L PAPP + P + PP PP L PP G
Sbjct: 652 IPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAG 697
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 14/48 (29%)
Query: 45 LPPPLLLLPAPPP------ELLPEPP------GVLLPPEPPGVLLPPL 80
LPPP +P PPP L P PP G LPP PP PPL
Sbjct: 645 LPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPP--PPL 690
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 38 AGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPP-----EPPGVLLPPL 80
+G+ L PP+ + A PP P PP LPP PP PPL
Sbjct: 660 SGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPL 707
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 41.6 bits (96), Expect = 1e-04
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 37 EAGMLPLPLPPPLLLLPAPPPELLP---EPPGVLLPPEPPGVLLPPL 80
EA + P PL PP P+PPP L P PP L PP PP V PPL
Sbjct: 398 EAKLPPPPLTPPA---PSPPPPLPPPSTSPPPPLCPPPPPPVSPPPL 441
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 42 PLPLPPPLLLLPA--PPPELLPEPPGVLLPPEPPGVLLPP 79
P P PPP L P+ PPP L P PP + PP P PP
Sbjct: 409 PAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPP 448
Score = 29.6 bits (65), Expect = 0.55
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 22/61 (36%)
Query: 44 PLPPPLLLLPAPP------PELLPEPPGVLL------------PPEPPGVLLPPLCLGLQ 85
P+PPP+ P PP P PPG LL PP PP PPL L L
Sbjct: 2210 PVPPPVKQPPLPPTISPTAPTSWTLPPGPLLGVLPVVGVVRPAPPPPP----PPLTLVLS 2265
Query: 86 S 86
S
Sbjct: 2266 S 2266
Score = 26.2 bits (56), Expect = 6.1
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
Query: 45 LPPPLLLLPAPPPELLPEPP 64
LPPP PAPPP P PP
Sbjct: 618 LPPPP---PAPPPPPAPSPP 634
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 30 AAGTWATEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLL----PPEPP 73
A +W G L LP ++ PAPPP P PP L+ P PP
Sbjct: 2228 APTSWTLPPGPLLGVLPVVGVVRPAPPP---PPPPLTLVLSSGPASPP 2272
>gi|31652264 RNA binding motif protein 26 [Homo sapiens]
Length = 980
Score = 41.2 bits (95), Expect = 2e-04
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 39 GMLPLPLPPPLLL------LPAPPPELLPEPPGVLLPPEPPGVLLPP 79
GMLP P PP++ LP PPP L P PP L PP PP LPP
Sbjct: 327 GMLPFPAQPPVVEGPPPPGLPPPPPILTP-PPVNLRPPVPPPGPLPP 372
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P+PPP L P+ PP P PP L P +P G+ PP
Sbjct: 363 PVPPPGPLPPSLPPVTGPPPP--LPPLQPSGMDAPP 396
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 47 PPLLLLPAPPPELL-PEPPGVLLPPEPPGVLLPPLCL 82
P +L PA PP + P PPG LPP PP + PP+ L
Sbjct: 326 PGMLPFPAQPPVVEGPPPPG--LPPPPPILTPPPVNL 360
Score = 29.6 bits (65), Expect = 0.55
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 42 PLPLPPPLLLLPAPPPELLP-EPPGVLLPP 70
P PLPP L + PPP L P +P G+ PP
Sbjct: 367 PGPLPPSLPPVTGPPPPLPPLQPSGMDAPP 396
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 40.8 bits (94), Expect = 2e-04
Identities = 27/60 (45%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 32 GTWATEAGMLPLPLPPPLLLLPAPPPEL----LPEPPGVLL------PPEPPGVLLPPLC 81
G A A LP PLP LP PPP L P PP LL PP PP LLP C
Sbjct: 467 GAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLPCTC 526
Score = 32.3 bits (72), Expect = 0.085
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 37 EAGMLPLPLPPPLLL------LPAPPPELLPEPPGVLLPPEPPGVLLPPL 80
+A P P PPPLL P PPP LP LP PP LP L
Sbjct: 417 QASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGL 466
Score = 32.3 bits (72), Expect = 0.085
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 14/58 (24%)
Query: 42 PLPLPPPL------LLLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQSRKCWFVP 93
P P PPPL L APPP LP G + PP PP LPP G C F+P
Sbjct: 439 PPPPPPPLPSVGAKALPTAPPPPPLP-GLGAMAPPAPP---LPPPLPG----SCEFLP 488
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Query: 44 PLPPPLLLLPA---PPPELLPEPPG--VLLPPEP---PGVLLPP 79
P PPPL L A P P L P PG LPP P PG+ PP
Sbjct: 458 PPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPP 501
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 40.8 bits (94), Expect = 2e-04
Identities = 27/60 (45%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 32 GTWATEAGMLPLPLPPPLLLLPAPPPEL----LPEPPGVLL------PPEPPGVLLPPLC 81
G A A LP PLP LP PPP L P PP LL PP PP LLP C
Sbjct: 467 GAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLPCTC 526
Score = 32.3 bits (72), Expect = 0.085
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 37 EAGMLPLPLPPPLLL------LPAPPPELLPEPPGVLLPPEPPGVLLPPL 80
+A P P PPPLL P PPP LP LP PP LP L
Sbjct: 417 QASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGL 466
Score = 32.3 bits (72), Expect = 0.085
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 14/58 (24%)
Query: 42 PLPLPPPL------LLLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQSRKCWFVP 93
P P PPPL L APPP LP G + PP PP LPP G C F+P
Sbjct: 439 PPPPPPPLPSVGAKALPTAPPPPPLP-GLGAMAPPAPP---LPPPLPG----SCEFLP 488
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Query: 44 PLPPPLLLLPA---PPPELLPEPPG--VLLPPEP---PGVLLPP 79
P PPPL L A P P L P PG LPP P PG+ PP
Sbjct: 458 PPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPP 501
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 40.8 bits (94), Expect = 2e-04
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 14 TSSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPP 73
TS+ + G+ A + A LPLP PP LP PPP P+P + PP PP
Sbjct: 652 TSADCPKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPP 711
Query: 74 GVLLPP 79
PP
Sbjct: 712 PPPPPP 717
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 11/44 (25%)
Query: 41 LPLPLPPPLLLLPAPPPELLPEPPGVLLP----PEPPGVLLPPL 80
+P PLPPP P PPP P P V +P P PPGV PP+
Sbjct: 705 MPPPLPPP----PPPPP---PAHPAVTVPPPPLPAPPGVPPPPI 741
Score = 35.8 bits (81), Expect = 0.008
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 15/47 (31%)
Query: 44 PLPPPLLLLPAPPPEL----------LPEPPGVLLPPEPPGVLLPPL 80
P+PPPL P PPP LP PPGV PP +LPPL
Sbjct: 704 PMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGV-----PPPPILPPL 745
Score = 32.7 bits (73), Expect = 0.065
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 12/54 (22%)
Query: 40 MLPLPLPPPLLLLPAPPPELLPEPP---------GVLLPPEPPGVLLPPLCLGL 84
MLPLPL PP LP P P P PP +PPEP PP GL
Sbjct: 1273 MLPLPLQPP---LPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGL 1323
Score = 31.6 bits (70), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Query: 52 LPAPPPELLPEPPGVLLPPEPPGV 75
+PAPPP L P+PP PP PP V
Sbjct: 1536 IPAPPPPLPPQPPP---PPPPPPV 1556
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPP 73
P PP +L LP PP P PP PP PP
Sbjct: 1268 PEPPMMLPLPLQPPLPPPRPP---RPPSPP 1294
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 8/34 (23%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGV 75
P PLP P PPP +LP LPP PPG+
Sbjct: 727 PPPLPAPP---GVPPPPILPP-----LPPFPPGL 752
Score = 27.7 bits (60), Expect = 2.1
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 13/43 (30%)
Query: 41 LPLPLPPPLLL-------------LPAPPPELLPEPPGVLLPP 70
LPLPLP PL L P P P LLP P PP
Sbjct: 1429 LPLPLPLPLPLPLALPAVLRAQARAPTPLPPLLPAPLASCPPP 1471
Score = 25.8 bits (55), Expect = 7.9
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 41 LPLPLPPPLLLLPAPPPELLPEPPGVL----LPPEPPGVLLPP 79
+P P PPPL P PPP P P L L + P +PP
Sbjct: 1536 IPAP-PPPLPPQPPPPPPPPPVEPTKLPFKELDNQWPSEAIPP 1577
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 40.0 bits (92), Expect = 4e-04
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 42 PLPLPPPLLLLPAPPPELLP----EPPGVLLPPEPPGVLLPP 79
P P PPP LP+PPP + P PP L PP PP + PP
Sbjct: 1472 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPP 1513
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 43 LPLPPPLLL----LPAPPPELLPEPPGVLLPPEPPGVLLPPL 80
LP PPPL+ P PPP P PP + PP PP PL
Sbjct: 1482 LPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPL 1523
Score = 35.0 bits (79), Expect = 0.013
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPP 73
P P PP LP PPP +P PP PP PP
Sbjct: 1491 PTPSSPPPPPLPPPPPPAMPSPP----PPPPP 1518
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
Query: 42 PLPLPPPLLLLPAPPPE-LLPEPPGVLLP----PEPPGVLLPP 79
P P PPP P PPP+ LP PP ++ P P PP + PP
Sbjct: 1467 PQPQPPP----PPPPPQPALPSPPPLVAPTPSSPPPPPLPPPP 1505
Score = 32.3 bits (72), Expect = 0.085
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
PLP PPP +P+PPP P + PPE P P
Sbjct: 1500 PLPPPPPPA-MPSPPPPPPPAAAPLAAPPEEPAAPSP 1535
Score = 30.0 bits (66), Expect = 0.42
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 37 EAGMLPLPLPPPLLLLPAPPPE-LLPEPPGVLLPPEPP 73
+AG+ P PL PP + P+ P L P+PP P PP
Sbjct: 1300 QAGLTP-PLSPPKSVPPSVPARGLQPQPPATPAVPHPP 1336
Score = 30.0 bits (66), Expect = 0.42
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P P PPP P P P P PP LP PP V P
Sbjct: 1457 PPPTPPPAPT-PQPQPPPPPPPPQPALPSPPPLVAPTP 1493
Score = 28.9 bits (63), Expect = 0.94
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 43 LPLPPPLLLLPA------PPPELLPEPPGVLLPPEPPGVLLPP 79
+P PPPL LP+ P P LL E P PP P PP
Sbjct: 1430 VPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP 1472
Score = 28.5 bits (62), Expect = 1.2
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 25/82 (30%)
Query: 30 AAGTWATEAGMLPLPLPPPL-LLLPAPPPELLP---------------------EP---P 64
A T T G+L P L L+LP PPP+LLP EP
Sbjct: 771 AQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRD 830
Query: 65 GVLLPPEPPGVLLPPLCLGLQS 86
G PP PP PP+ L L++
Sbjct: 831 GAPQPPPPPPPPPPPMPLQLEA 852
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPPL 80
PPP P P P P+PP PP+P PPL
Sbjct: 1457 PPPT---PPPAPTPQPQPPPPPPPPQPALPSPPPL 1488
Score = 26.9 bits (58), Expect = 3.6
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPPL 80
P P LL PPP P P PP PP P L
Sbjct: 1448 PEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPAL 1482
Score = 26.2 bits (56), Expect = 6.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 44 PLPPPLLLLPAPPPELLPEP-PGVLLPPEPPGVLLP 78
P PP L P P P P P P PP PP LP
Sbjct: 1448 PEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALP 1483
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 39.3 bits (90), Expect = 7e-04
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 2 RSKPISITKDIRTSSSMKSVSMTLGGSIAAGTWATEA---GMLP-LPLPPPLLLLPAPPP 57
R++ + + ++ T+ + M LGG+ A A ++P LP PP +LP PP
Sbjct: 196 RNQRVLMLRNTATADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPRPP---VLPVPP- 251
Query: 58 ELLPEPPGVLLPPEPPGVLLPPL 80
+ P PP V +PP PP +PP+
Sbjct: 252 -MPPRPPMVPMPPRPPIAPMPPM 273
Score = 37.7 bits (86), Expect = 0.002
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 42 PLPLPPPLLLLP-----APPPELLPEPPGVLLPPEPPGVLLPPL 80
P+P PP++ +P AP P + P PPG + P PPG + P+
Sbjct: 251 PMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPV 294
Score = 35.8 bits (81), Expect = 0.008
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 40 MLPLPLPPPLLLLPAPPP--ELLPEPPGVLLPPEPPGVLLPP 79
M +P PP+ LP PP L P PP LPP PP LPP
Sbjct: 336 MARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 377
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 40 MLPLPLPPPLLLLPAPPPELLPEPPG---VLLPPEPPGVLLPP 79
M P+P PP+ +P PP + P PPG +PP PP +PP
Sbjct: 300 MAPVPPWPPMAPVPTGPP-MAPVPPGPPMARVPPGPPMARVPP 341
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 40 MLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
M PLP PP+ LP PP + P PPG + P PP +P
Sbjct: 345 MAPLPPGPPMAPLPPGPP-MAPLPPGPPMAPLPPRSHVP 382
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 40 MLPLPLPPPLLLLPAPPP--------ELLPEPPGVLLPPEPPGVLLPPL 80
M P+P PP+ +P PP + P PPG + P PPG + PL
Sbjct: 318 MAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPL 366
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
Query: 40 MLPLPLPPPLLLLP--APPP---ELLPEPPGVLL---PPEPPGVLLPP 79
M+P+P PP+ +P AP P + P PPG + PP PP +PP
Sbjct: 258 MVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPP 305
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 38 AGMLPL-PLPPPLLLLPAPP-PELLPEPPGVLLPPEPPGVLLPPLCLG 83
A M P+ P+PP + P PP P + P PP + P PP + P+ G
Sbjct: 268 APMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTG 315
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 40 MLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPPL 80
M P+P PP+ +P PP + P P G + P PPG PP+
Sbjct: 291 MAPVPPWPPMAPVPPWPP-MAPVPTGPPMAPVPPG---PPM 327
Score = 30.0 bits (66), Expect = 0.42
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 44 PLPPPLLLLPAPP-PELLPEPPGVLLPPEPPGVLLPPL 80
P+PP + P PP P + P PP + P P G + P+
Sbjct: 284 PVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPV 321
>gi|40548415 dishevelled associated activator of morphogenesis 2
[Homo sapiens]
Length = 1067
Score = 39.3 bits (90), Expect = 7e-04
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 26 GGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGL 84
GG + + T + P P P P P PPP P PPG PP PPG P CLG+
Sbjct: 526 GGPLTLSSSMTTNDLPPPPPPLPFACCPPPPPP--PLPPGG--PPTPPGA---PPCLGM 577
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1786 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1845
Query: 87 RKC 89
KC
Sbjct: 1846 VKC 1848
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1780 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1813
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1410 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1447
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1737 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1773
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1763 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1822
Query: 87 RKC 89
KC
Sbjct: 1823 VKC 1825
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1757 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1790
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1385 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1422
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1714 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1750
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1766 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1825
Query: 87 RKC 89
KC
Sbjct: 1826 VKC 1828
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1760 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1793
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1388 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1425
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1717 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1753
>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1746 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1805
Query: 87 RKC 89
KC
Sbjct: 1806 VKC 1808
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1740 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1773
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1370 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1407
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1697 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1733
>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1783 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1842
Query: 87 RKC 89
KC
Sbjct: 1843 VKC 1845
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1777 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1810
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1407 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1444
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1734 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1770
>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1717 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1776
Query: 87 RKC 89
KC
Sbjct: 1777 VKC 1779
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1711 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1744
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1339 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1376
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1668 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1704
>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1788 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1847
Query: 87 RKC 89
KC
Sbjct: 1848 VKC 1850
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1782 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1815
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1410 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1447
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1739 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1775
>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 38.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 14/63 (22%)
Query: 41 LPLPLPPPLL--------------LLPAPPPELLPEPPGVLLPPEPPGVLLPPLCLGLQS 86
+PLPLPPP LLP P L P PP + PP P L C+ +
Sbjct: 1793 IPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPPPPSASFLSTECVCITG 1852
Query: 87 RKC 89
KC
Sbjct: 1853 VKC 1855
Score = 33.5 bits (75), Expect = 0.038
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 44 PLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
P PP + LP PPP P PP PP LLPP
Sbjct: 1787 PPSPPSIPLPLPPPTFFPLSVSTSGPPTPP--LLPP 1820
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 36 TEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
T+ + LP +PAP P P PP PP PPG L
Sbjct: 1415 TKTARIQAALPAAKPAVPAPAPVAAPPPP----PPPPPGAHL 1452
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 42 PLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
P + P LP PPP P PP P PP + P
Sbjct: 1744 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP 1780
>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 32 GTWATEAGMLPLPLPPPLLLLPA-------PPPELLPEPPGVLLPPEPPGVLLP 78
G A GM P P+ PP+ L PA PPP + P PPG+ PP PPG+ P
Sbjct: 187 GIMAPPPGMRP-PMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPP-PPGMRPP 238
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 27 GSIAAGTWATEAGMLPLPL--------PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
G++AA A A + P PPP + PPP ++ PPG + PP P + LP
Sbjct: 148 GTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG-MRPPMGPPIGLP 206
Query: 79 P 79
P
Sbjct: 207 P 207
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PPP + P PP LP G + PPG+ PP
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPP 224
>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 32 GTWATEAGMLPLPLPPPLLLLPA-------PPPELLPEPPGVLLPPEPPGVLLP 78
G A GM P P+ PP+ L PA PPP + P PPG+ PP PPG+ P
Sbjct: 187 GIMAPPPGMRP-PMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPP-PPGMRPP 238
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 27 GSIAAGTWATEAGMLPLPL--------PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
G++AA A A + P PPP + PPP ++ PPG + PP P + LP
Sbjct: 148 GTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG-MRPPMGPPIGLP 206
Query: 79 P 79
P
Sbjct: 207 P 207
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PPP + P PP LP G + PPG+ PP
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPP 224
>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 32 GTWATEAGMLPLPLPPPLLLLPA-------PPPELLPEPPGVLLPPEPPGVLLP 78
G A GM P P+ PP+ L PA PPP + P PPG+ PP PPG+ P
Sbjct: 187 GIMAPPPGMRP-PMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPP-PPGMRPP 238
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 27 GSIAAGTWATEAGMLPLPL--------PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
G++AA A A + P PPP + PPP ++ PPG + PP P + LP
Sbjct: 148 GTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG-MRPPMGPPIGLP 206
Query: 79 P 79
P
Sbjct: 207 P 207
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PPP + P PP LP G + PPG+ PP
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPP 224
>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 32 GTWATEAGMLPLPLPPPLLLLPA-------PPPELLPEPPGVLLPPEPPGVLLP 78
G A GM P P+ PP+ L PA PPP + P PPG+ PP PPG+ P
Sbjct: 187 GIMAPPPGMRP-PMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPP-PPGMRPP 238
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 27 GSIAAGTWATEAGMLPLPL--------PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
G++AA A A + P PPP + PPP ++ PPG + PP P + LP
Sbjct: 148 GTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG-MRPPMGPPIGLP 206
Query: 79 P 79
P
Sbjct: 207 P 207
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PPP + P PP LP G + PPG+ PP
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPP 224
>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 32 GTWATEAGMLPLPLPPPLLLLPA-------PPPELLPEPPGVLLPPEPPGVLLP 78
G A GM P P+ PP+ L PA PPP + P PPG+ PP PPG+ P
Sbjct: 187 GIMAPPPGMRP-PMGPPIGLPPARGTPIGMPPPGMRPPPPGIRGPP-PPGMRPP 238
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 27 GSIAAGTWATEAGMLPLPL--------PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
G++AA A A + P PPP + PPP ++ PPG + PP P + LP
Sbjct: 148 GTVAAAAVAATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPG-MRPPMGPPIGLP 206
Query: 79 P 79
P
Sbjct: 207 P 207
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 46 PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
PPP + P PP LP G + PPG+ PP
Sbjct: 191 PPPGMRPPMGPPIGLPPARGTPIGMPPPGMRPPP 224
>gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]
Length = 1164
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 35 ATEAGM-LPLPLPPPLLLLPAPPPELLPEPPGVL--LPPEPPGVLLPPL 80
+ EAG +P P PP LL PPP LP PP + PP PP L PL
Sbjct: 562 SVEAGKDIPAPSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLPLAAPL 610
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Query: 43 LPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLP 78
+P PPP LP PPP P PP PP P LP
Sbjct: 582 VPPPPP---LPPPPPIKGPFPPP---PPLPLAAPLP 611
>gi|4557329 fas ligand [Homo sapiens]
Length = 281
Score = 38.5 bits (88), Expect = 0.001
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 18/63 (28%)
Query: 28 SIAAGTWATEAGMLPLPL----------PPPLLLLPAPPPELLPEPPGVLLPPEPPGVLL 77
S A+ WA +LP P PPP P PPP L P PP LPP P L
Sbjct: 17 SSASSPWAPPGTVLPCPTSVPRRPGQRRPPP----PPPPPPLPPPPPPPPLPPLP----L 68
Query: 78 PPL 80
PPL
Sbjct: 69 PPL 71
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 38.5 bits (88), Expect = 0.001
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 15 SSSMKSVSMTLGGSIAAGTWATEAGMLPLPLPPPLL---LLPAPPPELLPEPPGVLLPPE 71
+S + + G+ G A LP P PPP L LP PPP+ + EPP +PP
Sbjct: 528 TSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFM-EPPPDFVPPP 586
Query: 72 PP------GVLLPP 79
PP G LPP
Sbjct: 587 PPSYAGIAGSELPP 600
Score = 37.7 bits (86), Expect = 0.002
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 22 SMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELLPEPPGVLLPPEPPGVLLPP 79
S GS A A G LP PP L P PPP L +P LPP PP + PP
Sbjct: 525 SSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPE---LPPPPPDFMEPP 579
Score = 32.7 bits (73), Expect = 0.065
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 41 LPLPLPPPLLLLPAPPPELLPEPPGVL-LPPEPP 73
LP P PPP PAP P+ PP V PP PP
Sbjct: 598 LPPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPP 631
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 20 SVSMTLGGSIAAGTWATEAGMLPLPLPPPLLLLPAPPPELLPEP 63
+ S+ G ++AA + LP P P+L LP PPP PEP
Sbjct: 107 AASLGYGTNVAATGISQYEDDLPPPPADPVLDLPLPPPP--PEP 148
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Query: 41 LPLPLP----PPLLLLPAPPPELLPEPPGVLLPPEPP 73
LP P P PP +P PPP L PP PP
Sbjct: 568 LPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPP 604
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 38.5 bits (88), Expect = 0.001
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 18/90 (20%)
Query: 8 ITKDIRTSSSMKSVSMTLG-GSIAAGTWATEAGMLPLPLPPPLLLLPA------------ 54
+ + R + + SM LG S+A G EA P PPP P+
Sbjct: 896 LERQAREIEAFDAESMRLGFSSMALGGIPAEAAAQGYPAPPPAPAWPSRPVPRSGAHWSH 955
Query: 55 -PPPELLPEP----PGVLLPPEPPGVLLPP 79
PPP +P P P +L PP PP L PP
Sbjct: 956 GPPPPGMPPPAWRQPSLLAPPGPPNWLGPP 985
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.140 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,434,963
Number of Sequences: 37866
Number of extensions: 478995
Number of successful extensions: 9988
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 475
Number of HSP's that attempted gapping in prelim test: 4194
Number of HSP's gapped (non-prelim): 4204
length of query: 106
length of database: 18,247,518
effective HSP length: 76
effective length of query: 30
effective length of database: 15,369,702
effective search space: 461091060
effective search space used: 461091060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.