Guide to the Human Genome
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Search of human proteins with 239748494

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748494 PREDICTED: hypothetical protein [Homo sapiens]
         (459 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748494 PREDICTED: hypothetical protein [Homo sapiens]           935   0.0  
gi|169167241 PREDICTED: hypothetical protein [Homo sapiens]           642   0.0  
gi|169166404 PREDICTED: hypothetical protein [Homo sapiens]           591   e-169
gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]            39   0.010
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]            39   0.010
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]            39   0.010
gi|211059441 zinc finger protein 843 [Homo sapiens]                    38   0.017
gi|145207994 hairy and enhancer of split 7 [Homo sapiens]              38   0.022
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]            36   0.064
gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sap...    36   0.064
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]            35   0.11 
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ...    35   0.11 
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]            35   0.11 
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]         35   0.14 
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    35   0.19 
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ...    35   0.19 
gi|38327037 hyperpolarization activated cyclic nucleotide-gated ...    35   0.19 
gi|46409306 family with sequence similarity 43, member B [Homo s...    34   0.24 
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]            34   0.32 
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ...    34   0.32 
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ...    34   0.32 
gi|28416953 acyl-CoA synthetase short-chain family member 1 [Hom...    34   0.32 
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]           33   0.41 
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]            33   0.41 
gi|148762978 similar to CG15216-PA [Homo sapiens]                      33   0.41 
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]     33   0.54 
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]           33   0.71 
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]            33   0.71 
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]           33   0.71 
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ...    33   0.71 

>gi|239748494 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 459

 Score =  935 bits (2417), Expect = 0.0
 Identities = 459/459 (100%), Positives = 459/459 (100%)

Query: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60
           MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP
Sbjct: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60

Query: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ 120
           GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ
Sbjct: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ 120

Query: 121 TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT 180
           TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT
Sbjct: 121 TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT 180

Query: 181 PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR 240
           PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR
Sbjct: 181 PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR 240

Query: 241 GERGRARIIAENLEGVDGLQKSGYVKGRNYDFSFHEFFGNGTIANGFPMEQHEGIAPVPG 300
           GERGRARIIAENLEGVDGLQKSGYVKGRNYDFSFHEFFGNGTIANGFPMEQHEGIAPVPG
Sbjct: 241 GERGRARIIAENLEGVDGLQKSGYVKGRNYDFSFHEFFGNGTIANGFPMEQHEGIAPVPG 300

Query: 301 CDCGRKKAFGRKSLKEDNFIFLVFMFLLMPTRTALPVAVKHGALLWQDKRLLKTKGCFTG 360
           CDCGRKKAFGRKSLKEDNFIFLVFMFLLMPTRTALPVAVKHGALLWQDKRLLKTKGCFTG
Sbjct: 301 CDCGRKKAFGRKSLKEDNFIFLVFMFLLMPTRTALPVAVKHGALLWQDKRLLKTKGCFTG 360

Query: 361 AALRPATPSPSELARDSAPRPLGGARGAEIAVEDVACRFCGARLGTAVTEVTRKETARKG 420
           AALRPATPSPSELARDSAPRPLGGARGAEIAVEDVACRFCGARLGTAVTEVTRKETARKG
Sbjct: 361 AALRPATPSPSELARDSAPRPLGGARGAEIAVEDVACRFCGARLGTAVTEVTRKETARKG 420

Query: 421 RGPAPPQPLAAWIGQSLLSPSDQGLHVAFTQGEFIKPSE 459
           RGPAPPQPLAAWIGQSLLSPSDQGLHVAFTQGEFIKPSE
Sbjct: 421 RGPAPPQPLAAWIGQSLLSPSDQGLHVAFTQGEFIKPSE 459


>gi|169167241 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 319

 Score =  642 bits (1655), Expect = 0.0
 Identities = 312/312 (100%), Positives = 312/312 (100%)

Query: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60
           MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP
Sbjct: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60

Query: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ 120
           GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ
Sbjct: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ 120

Query: 121 TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT 180
           TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT
Sbjct: 121 TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT 180

Query: 181 PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR 240
           PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR
Sbjct: 181 PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR 240

Query: 241 GERGRARIIAENLEGVDGLQKSGYVKGRNYDFSFHEFFGNGTIANGFPMEQHEGIAPVPG 300
           GERGRARIIAENLEGVDGLQKSGYVKGRNYDFSFHEFFGNGTIANGFPMEQHEGIAPVPG
Sbjct: 241 GERGRARIIAENLEGVDGLQKSGYVKGRNYDFSFHEFFGNGTIANGFPMEQHEGIAPVPG 300

Query: 301 CDCGRKKAFGRK 312
           CDCGRKKAFGRK
Sbjct: 301 CDCGRKKAFGRK 312


>gi|169166404 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 327

 Score =  591 bits (1524), Expect = e-169
 Identities = 296/320 (92%), Positives = 298/320 (93%), Gaps = 8/320 (2%)

Query: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60
           MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP
Sbjct: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60

Query: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ 120
           GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ
Sbjct: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ 120

Query: 121 TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT 180
           TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT
Sbjct: 121 TTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGT 180

Query: 181 PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR 240
           PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR
Sbjct: 181 PGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR 240

Query: 241 GERGRARIIAENLEGVDGLQKSGYVKGRNYDFS-FHEFFGNGT-------IANGFPMEQH 292
           GERGRARIIAENLEGVDGLQKSGY+KG     S F      G         A+GFPMEQH
Sbjct: 241 GERGRARIIAENLEGVDGLQKSGYLKGGEITISPFMNSLARGPWQRQAGFSADGFPMEQH 300

Query: 293 EGIAPVPGCDCGRKKAFGRK 312
           EGIAPVPGCDCG KKAFGRK
Sbjct: 301 EGIAPVPGCDCGSKKAFGRK 320


>gi|239753673 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 380

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 55/185 (29%), Positives = 72/185 (38%), Gaps = 32/185 (17%)

Query: 2   SAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPA--------VAPVFVSLAV 53
           SAPRR  L P    P   +P + +    P  +PG   +  PA        +  V V +AV
Sbjct: 85  SAPRRRILGPGGRGPQAEVPLVLSERHVPAGIPGARGRLAPARGGAARARLLAVEVRVAV 144

Query: 54  AAQR-LHPGC-----HPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPA 107
            ++R  H G       PR  AQ      RH  P  R  +   R++    R  L LRPA  
Sbjct: 145 QSERHRHVGAVQLVPAPRQAAQAADTGPRHASPGARRPAPGARRS----RPRL-LRPASP 199

Query: 108 ALQITPLRRPKDQTTAPR-AAEPPTSAHRRLLPFYNLAAAARPRV--------LPARAGA 158
                P   P+ ++TAPR     P     R  P    A  AR  +        L  R GA
Sbjct: 200 ----PPRPAPRRRSTAPRHEGGRPGRGRTRRQPHLAGAGCARLELEGARMGERLHRRQGA 255

Query: 159 PKTLC 163
           P+T C
Sbjct: 256 PETAC 260


>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 41/127 (32%), Positives = 50/127 (39%), Gaps = 36/127 (28%)

Query: 14  GQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRH 73
           G P  R+ A    P PP P  G ++ + P               L PG            
Sbjct: 58  GSPLYRVSAPPPAPPPPPPPGGPSRSERPRAG------------LRPGAFVSP------- 98

Query: 74  LLRHVGPAGREHSCTGRQAGLAGR-----AALSL--RPAPAALQITPLRRPKDQTTAPRA 126
                GP GR  SC+GR AG AGR     AALS   R  PA  Q+ P  R    T +P  
Sbjct: 99  -----GPLGRRASCSGR-AGSAGRLRCSAAALSAAQRGGPARAQVPPALR----TFSPGP 148

Query: 127 AEPPTSA 133
           A PP ++
Sbjct: 149 ASPPRAS 155


>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 41/127 (32%), Positives = 50/127 (39%), Gaps = 36/127 (28%)

Query: 14  GQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRH 73
           G P  R+ A    P PP P  G ++ + P               L PG            
Sbjct: 58  GSPLYRVSAPPPAPPPPPPPGGPSRSERPRAG------------LRPGAFVSP------- 98

Query: 74  LLRHVGPAGREHSCTGRQAGLAGR-----AALSL--RPAPAALQITPLRRPKDQTTAPRA 126
                GP GR  SC+GR AG AGR     AALS   R  PA  Q+ P  R    T +P  
Sbjct: 99  -----GPLGRRASCSGR-AGSAGRLRCSAAALSAAQRGGPARAQVPPALR----TFSPGP 148

Query: 127 AEPPTSA 133
           A PP ++
Sbjct: 149 ASPPRAS 155


>gi|211059441 zinc finger protein 843 [Homo sapiens]
          Length = 348

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 80  PAGREHSCTGRQAGLAGRAALSL---RPAPAALQITPLRRPKDQTTAPRAAEPPTSAHRR 136
           P GR HS  G + G +G+    L        AL+++P+  P        A  PP ++HRR
Sbjct: 84  PLGRSHSSAGVRQGFSGQLCCWLTKEHTLAEALRLSPV--PAGFWGPVEADRPPANSHRR 141

Query: 137 LLPF--------YNLAAAARPRVLPARAGAPKTLCGAGAAATLRPRE-ATEGTPGVRWAG 187
           + PF         N   +   RVLP   G      G+  + +L P   A + T G+R  G
Sbjct: 142 VCPFCCCSCGDSVNEKTSLSQRVLP-HPGEKTCRGGSVESVSLAPSSVAPDSTSGLRPCG 200

Query: 188 -----VGRLPP 193
                +  LPP
Sbjct: 201 SPGSFLQHLPP 211


>gi|145207994 hairy and enhancer of split 7 [Homo sapiens]
          Length = 225

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 42/121 (34%), Positives = 49/121 (40%), Gaps = 19/121 (15%)

Query: 22  ALHNF--PSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRHLLRHVG 79
           ALH +  P PPRP P     + PA  P   SL  AA  L P  H R           H G
Sbjct: 121 ALHGYLRPKPPRPKP--VDPRPPAPRP---SLDPAAPALGPALHQRPPV--------HQG 167

Query: 80  -PAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEPPTSAHRRLL 138
            P+ R   C    +  + RA  S  PAP    + P   P  Q  AP+A  PP  A  R  
Sbjct: 168 HPSPR---CAWSPSLCSPRAGDSGAPAPLTGLLPPPPPPHRQDGAPKAPLPPPPAFWRPW 224

Query: 139 P 139
           P
Sbjct: 225 P 225


>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
          Length = 319

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 71/246 (28%), Positives = 91/246 (36%), Gaps = 31/246 (12%)

Query: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60
           +S      L+P RG    +IP   +  S P P  G AK K   ++    +L  A  +  P
Sbjct: 79  VSCGEEKPLVPRRGASSPQIPLNISGSSEPPPQKGDAKLKGVRMS----TLQTAETKPTP 134

Query: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGL-AGRAALSLRP-----APAALQITP- 113
            C PR   + LR    H  P  R+ S     A L A R   S  P     AP    + P 
Sbjct: 135 TC-PRRQRRWLR-TTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPE 192

Query: 114 LRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLP--ARAGAPKTLCGAGAAATL 171
           LRR K    +  +  P         P    A   RP  +P  +RA AP T  G       
Sbjct: 193 LRRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRARAPDTKAGT------ 246

Query: 172 RPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPR 231
           R R+   G   +R A      PH GG     A   +++A PR   P      A A L   
Sbjct: 247 RARDPAPGASQLRAAH----SPHRGG---GGAPRTQLAAPPR---PPLPQENAAAGLASC 296

Query: 232 RVSCGA 237
             SC A
Sbjct: 297 SASCAA 302


>gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo
           sapiens]
          Length = 666

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 49/175 (28%), Positives = 62/175 (35%), Gaps = 13/175 (7%)

Query: 71  LRHLLRHVGP-AGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEP 129
           L ++ R+ GP A       G +AG  GRA   L    +  +    +R   QT A  + EP
Sbjct: 3   LFYVARYPGPDAAAAAGPEGAEAGAHGRARALLERLQSRARERQQQREPAQTEAAASTEP 62

Query: 130 PTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRP--REATEGTPGVRWAG 187
            T   RR           R RV  A  G+P+   G    A       E+ E  PG   AG
Sbjct: 63  ATRRRRR--------PRRRRRVNDAEPGSPEAPQGKRRKADGEDAGAESNEEAPGEPSAG 114

Query: 188 VGRLPPHE--GGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSR 240
                P E   G   E   +   SA   A         A   L+P  V  G G R
Sbjct: 115 SSEEAPGEPSAGSSEEAPGERSTSASAEAAPDGPALEEAAGPLVPGLVLGGFGKR 169


>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 37/127 (29%), Positives = 49/127 (38%), Gaps = 16/127 (12%)

Query: 79  GPAGREHSCTGRQAGL---AGRAALS----LRPAPAALQITPLRRPKDQTTAPRAAE--- 128
           G  G +H   GR+A     AG A L+    +R AP+ L+   L+R +       A     
Sbjct: 87  GGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARK 146

Query: 129 --PPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWA 186
             P  +   R LP +     ARP V P+ A   +   G GA    RP       P   WA
Sbjct: 147 PGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGA----RPVPGGPAGPRESWA 202

Query: 187 GVGRLPP 193
                PP
Sbjct: 203 RRTSSPP 209


>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
           sapiens]
          Length = 231

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 37/127 (29%), Positives = 49/127 (38%), Gaps = 16/127 (12%)

Query: 79  GPAGREHSCTGRQAGL---AGRAALS----LRPAPAALQITPLRRPKDQTTAPRAAE--- 128
           G  G +H   GR+A     AG A L+    +R AP+ L+   L+R +       A     
Sbjct: 90  GGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARK 149

Query: 129 --PPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWA 186
             P  +   R LP +     ARP V P+ A   +   G GA    RP       P   WA
Sbjct: 150 PGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGA----RPVPGGPAGPRESWA 205

Query: 187 GVGRLPP 193
                PP
Sbjct: 206 RRTSSPP 212


>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 37/127 (29%), Positives = 49/127 (38%), Gaps = 16/127 (12%)

Query: 79  GPAGREHSCTGRQAGL---AGRAALS----LRPAPAALQITPLRRPKDQTTAPRAAE--- 128
           G  G +H   GR+A     AG A L+    +R AP+ L+   L+R +       A     
Sbjct: 90  GGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGGRGAGRARK 149

Query: 129 --PPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWA 186
             P  +   R LP +     ARP V P+ A   +   G GA    RP       P   WA
Sbjct: 150 PGPDRAGAERSLPAHRAPRLARPPVPPSVAHVARASAGLGA----RPVPGGPAGPRESWA 205

Query: 187 GVGRLPP 193
                PP
Sbjct: 206 RRTSSPP 212


>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
          Length = 261

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 6/91 (6%)

Query: 16  PGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRHLL 75
           PG ++P     P P RP P      +PA  P  +   +   R  PGC PR      R L 
Sbjct: 40  PGGQLPGARRGPGPRRPAP------LPARPPGALGSVLRPLRARPGCRPRRPHPAARCLP 93

Query: 76  RHVGPAGREHSCTGRQAGLAGRAALSLRPAP 106
                  R H   G      G    + RPAP
Sbjct: 94  LRPHRPTRRHRRPGGFPLAWGSPQPAPRPAP 124


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 40/137 (29%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 106 PAALQITPLRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGA 165
           P+AL      RP     AP A  PP +      P     AAA P      A +P     A
Sbjct: 87  PSALTRAVAWRP---AAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPA 143

Query: 166 GAAATLRPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRA- 224
              A +RP  A  G P    A V   P         L     ++A P A  P  V P A 
Sbjct: 144 AVPAAVRPPAA--GPPAAALAAV--YPAAADPSAASLCAASPLAAVPAAASPAAVAPAAV 199

Query: 225 -PAVLLPRRVSCGAGSR 240
            P    P   S  A S+
Sbjct: 200 CPGAAGPSAASLCAASQ 216


>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
           sapiens]
          Length = 252

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 39/117 (33%), Positives = 44/117 (37%), Gaps = 27/117 (23%)

Query: 90  RQAGLAGRAALSLRPAPA---ALQITPLRRPKDQTTA--PRAAEPPTSAHRRLLPFYNLA 144
           R+AG AG A     PAP    AL   PL +    T A  PRA  P  +A +R L    L 
Sbjct: 129 REAGAAGAARAPKPPAPGSGQALPADPLLQAAASTLAGRPRAPPPAPAAGQRGLGSGALG 188

Query: 145 ------AAARPRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWAGVGRLPPHE 195
                  AARP   P RA  P                  +G  G R  G GR P  E
Sbjct: 189 LGRREKLAARPAATPRRASRP----------------PWQGCRGARGLGGGRGPLRE 229


>gi|38327037 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 3 [Homo sapiens]
          Length = 774

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 20/140 (14%)

Query: 92  AGLAGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAARPRV 151
           A L  R+A     +PA+  + P+R     +T+   A P  + H       +L+ A R +V
Sbjct: 639 ATLLARSAWRSAGSPAS-PLVPVRAGPWASTSRLPAPPARTLHA------SLSRAGRSQV 691

Query: 152 L---PARAGAPKTLCGAG----AAATLRPREAT-EGTPGVRWAGVGRLPPHEGGLQVELA 203
               P   G  + L   G    A+    P+ AT +G+PG + +G  RLPP   GL   LA
Sbjct: 692 SLLGPPPGGGGRRLGPRGRPLSASQPSLPQRATGDGSPGRKGSGSERLPP--SGL---LA 746

Query: 204 WDDRVSAEPRAFCPRFVTPR 223
              R +  PR   P   TPR
Sbjct: 747 KPPRTAQPPRPPVPEPATPR 766


>gi|46409306 family with sequence similarity 43, member B [Homo
           sapiens]
          Length = 329

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 57/198 (28%), Positives = 69/198 (34%), Gaps = 32/198 (16%)

Query: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQ 120
           G HPRV A V RH  RH     R H+    +A  A RA   L    A    +  +R + Q
Sbjct: 153 GRHPRVFAWVYRHQARHKAVVLRCHAVLLARAHKA-RALARLLRQTALAAFSDFKRLQRQ 211

Query: 121 TTAPR-----------AAEPPTSAHRRLLPFYNLAAAARPRVLPARAGAPKTLCGAGAAA 169
           + A             AA  P +  RRLL   N   A RP       GAP+         
Sbjct: 212 SDARHVRQQHLRAGGAAASVPRAPLRRLL---NAKCAYRPPPSERSRGAPRLSSIQEEDE 268

Query: 170 TLRPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLL 229
                +A E   GV        P  E    + LA + R        C     P  P    
Sbjct: 269 EEEEDDAEEQEGGV--------PQRERPEVLSLARELRT-------CSLRGAPAPPPPAQ 313

Query: 230 PRRVSCGAGSRGERGRAR 247
           PRR    AG R   G+AR
Sbjct: 314 PRRWK--AGPRERAGQAR 329


>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 294

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 149 PRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWA-GVGRLPPHEGGLQVELAWDDR 207
           P  +   AGA   L  A A ++L   +  +  PG  W    G + P  GG  + +    R
Sbjct: 3   PACVGGDAGA---LSAAPAGSSLNSPDPCQLLPGTGWMMRPGEVAP-AGGSPLAVGGAFR 58

Query: 208 VSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSRGERGRAR 247
           VS+ PR F PR   P  P+     R  CGA   G RGR R
Sbjct: 59  VSS-PRPFPPR---PERPS--RRHRAGCGAHGPGSRGRER 92


>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
           sapiens]
          Length = 315

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 149 PRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWA-GVGRLPPHEGGLQVELAWDDR 207
           P  +   AGA   L  A A ++L   +  +  PG  W    G + P  GG  + +    R
Sbjct: 3   PACVGGDAGA---LSAAPAGSSLNSPDPCQLLPGTGWMMRPGEVAP-AGGSPLAVGGAFR 58

Query: 208 VSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSRGERGRAR 247
           VS+ PR F PR   P  P+     R  CGA   G RGR R
Sbjct: 59  VSS-PRPFPPR---PERPS--RRHRAGCGAHGPGSRGRER 92


>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
           sapiens]
          Length = 315

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 149 PRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWA-GVGRLPPHEGGLQVELAWDDR 207
           P  +   AGA   L  A A ++L   +  +  PG  W    G + P  GG  + +    R
Sbjct: 3   PACVGGDAGA---LSAAPAGSSLNSPDPCQLLPGTGWMMRPGEVAP-AGGSPLAVGGAFR 58

Query: 208 VSAEPRAFCPRFVTPRAPAVLLPRRVSCGAGSRGERGRAR 247
           VS+ PR F PR   P  P+     R  CGA   G RGR R
Sbjct: 59  VSS-PRPFPPR---PERPS--RRHRAGCGAHGPGSRGRER 92


>gi|28416953 acyl-CoA synthetase short-chain family member 1 [Homo
          sapiens]
          Length = 689

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 17 GRRIPALHNFPSPP-RPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRHLL 75
          GR + +L      P RP  GV+  +  A  P   + AVAA    PG +P + AQ  R   
Sbjct: 11 GRLLGSLRGLSGQPARPPCGVSAPRRAASGPSGSAPAVAAAAAQPGSYPALSAQAAREPA 70

Query: 76 RHVGPAGRE 84
             GP  R+
Sbjct: 71 AFWGPLARD 79


>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
          Length = 320

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 69/246 (28%), Positives = 89/246 (36%), Gaps = 30/246 (12%)

Query: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60
           +S      L+P RG    +IP   +  S P P  G AK K   ++    +L  A  +   
Sbjct: 79  VSCGEEKPLVPRRGASSPQIPLNISGSSEPPPQKGDAKLKGVRMS----TLQTAETKPRT 134

Query: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGL-AGRAALSLRP-----APAALQITP- 113
              PR   + LR    H  P  R+ S     A L A R   S  P     AP    + P 
Sbjct: 135 PTCPRRQRRWLR-TTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPE 193

Query: 114 LRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLP--ARAGAPKTLCGAGAAATL 171
           LRR K    +  +  P         P    A   RP  +P  +RA AP T  G       
Sbjct: 194 LRRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRARAPDTKAGT------ 247

Query: 172 RPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPR 231
           R R+   G   +R A      PH GG     A   +++A PR   P      A A L   
Sbjct: 248 RARDPAPGASQLRAAH----SPHRGG---GGAPRTQLAAPPR---PPLPQENAAAGLASC 297

Query: 232 RVSCGA 237
             SC A
Sbjct: 298 SASCAA 303


>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
          Length = 320

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 69/246 (28%), Positives = 89/246 (36%), Gaps = 30/246 (12%)

Query: 1   MSAPRRDALLPLRGQPGRRIPALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHP 60
           +S      L+P RG    +IP   +  S P P  G AK K   ++    +L  A  +   
Sbjct: 79  VSCGEEKPLVPRRGASSPQIPLNISGSSEPPPQKGDAKLKGVRMS----TLQTAETKPRT 134

Query: 61  GCHPRVLAQVLRHLLRHVGPAGREHSCTGRQAGL-AGRAALSLRP-----APAALQITP- 113
              PR   + LR    H  P  R+ S     A L A R   S  P     AP    + P 
Sbjct: 135 PTCPRRQRRWLR-TTPHPPPPTRQGSREMAGAFLVAPRPPYSRSPGGPESAPTPASVLPE 193

Query: 114 LRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLP--ARAGAPKTLCGAGAAATL 171
           LRR K    +  +  P         P    A   RP  +P  +RA AP T  G       
Sbjct: 194 LRRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAVPSASRARAPDTKAGT------ 247

Query: 172 RPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDRVSAEPRAFCPRFVTPRAPAVLLPR 231
           R R+   G   +R A      PH GG     A   +++A PR   P      A A L   
Sbjct: 248 RARDPAPGASQLRAAH----SPHRGG---GGAPRTQLAAPPR---PPLPQENAAAGLASC 297

Query: 232 RVSCGA 237
             SC A
Sbjct: 298 SASCAA 303


>gi|148762978 similar to CG15216-PA [Homo sapiens]
          Length = 976

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 51/209 (24%), Positives = 68/209 (32%), Gaps = 32/209 (15%)

Query: 21  PALHNFPSPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRHLLRHVGP 80
           PA+   P PP P   V + +     P   + + +A R  PG  P   +  +  L R    
Sbjct: 62  PAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPV--LPRR--- 116

Query: 81  AGREHSCTGRQAGLAGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEPPTSAHRRLLPF 140
                   GR+A  A RA  S R  PA     P  R       P   +P      R+ P 
Sbjct: 117 --------GREAQRAARAEASPRREPA----YPALRALANELHPIKLQPQRGGPGRVAPL 164

Query: 141 YNLAAAARPRVLPARAGAPKTLC-------------GAGAAATLRPREATE-GTPGVRWA 186
              A    P   PA   AP   C                 + +  P EA     P  ++ 
Sbjct: 165 CAAAGRCAPPEPPA-GPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAPQFH 223

Query: 187 GVGRLPPHEGGLQVELAWDDRVSAEPRAF 215
           G+    P    L       D   A+PRAF
Sbjct: 224 GLTVPGPRHMALSRTPTPSDSYCADPRAF 252


>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
          Length = 659

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 39/114 (34%), Positives = 46/114 (40%), Gaps = 3/114 (2%)

Query: 98  AALSLRPAPAALQITPLRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAARPRVLPARAG 157
           AAL+L  APA L   P   P      P  +  P      LL    LAA       PA  G
Sbjct: 7   AALALAAAPAPLPQPPPPPPPPPPPLPPPSGGPELEGDGLLLRERLAALGLDDPSPAEPG 66

Query: 158 APKTLCGAGAAATLRPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDRVSAE 211
           AP  L    AAA  + R A E +P  R A  GR P      ++EL  D+    E
Sbjct: 67  AP-ALRAPAAAAQGQARRAAELSPEER-APPGR-PGAPEAAELELEEDEEEGEE 117


>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 26/131 (19%)

Query: 82  GREHSCTGRQAGL------AGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEP-PTSAH 134
           GR  +  GR  G       AG +A +  P P     TP   P+   + P+   P P    
Sbjct: 82  GRAKTTRGRSQGAGATETSAGNSAATAAPHP-----TPASYPQGTISPPQLPAPRPKRFG 136

Query: 135 RRLLPFYNL-------AAAARPRV------LPARAGAPKTLCGAGAAATLRPREATEGTP 181
            +  P + +       A    PRV       P R   P T C  GA A    REA     
Sbjct: 137 GKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQ 196

Query: 182 GVRWAGVGRLP 192
           G+R A   RLP
Sbjct: 197 GLR-APAARLP 206


>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 296

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 67/215 (31%), Positives = 81/215 (37%), Gaps = 50/215 (23%)

Query: 28  SPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRHLLRHVGPAGREHSC 87
           SPPRP  G A+ ++ A +    + A  AQR+  G        +LR     +GPA R    
Sbjct: 80  SPPRP--GSARTQLVATSAAQAAAAGRAQRVRRG--------LLRWRTTALGPA-RPRLR 128

Query: 88  TGRQAGLAGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAA 147
             R     G   L   PAP                 PRA  P     R L       AA+
Sbjct: 129 RPRHRLPGGSRRL---PAP----------------GPRAPAPGKGREREL----RTGAAS 165

Query: 148 RPRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDR 207
             R  PAR G P+ L  A  A+T RPR    G P      V   PP  GGL      +  
Sbjct: 166 IDRA-PARTG-PEDL--AARASTRRPRGFRPGLP------VPTAPP--GGLAAAAKDETS 213

Query: 208 VSAEPRAFCPRFVTPRAPAVLLPRRV-SCGAGSRG 241
            +A  R   PR     A  V   R V SCGA + G
Sbjct: 214 CAARERGASPR---GDAGRVGRTRAVPSCGAPAVG 245


>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 26/131 (19%)

Query: 82  GREHSCTGRQAGL------AGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEP-PTSAH 134
           GR  +  GR  G       AG +A +  P P     TP   P+   + P+   P P    
Sbjct: 82  GRAKTTRGRSQGAGATETSAGNSAATAAPHP-----TPASYPQGTISPPQLPAPRPKRFG 136

Query: 135 RRLLPFYNL-------AAAARPRV------LPARAGAPKTLCGAGAAATLRPREATEGTP 181
            +  P + +       A    PRV       P R   P T C  GA A    REA     
Sbjct: 137 GKQRPLWRIRGWETTVARLPEPRVGKLGKGPPPRPAPPGTRCCPGARAAQLLREAAAAAQ 196

Query: 182 GVRWAGVGRLP 192
           G+R A   RLP
Sbjct: 197 GLR-APAARLP 206


>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
           sapiens]
          Length = 296

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 67/215 (31%), Positives = 81/215 (37%), Gaps = 50/215 (23%)

Query: 28  SPPRPVPGVAKQKIPAVAPVFVSLAVAAQRLHPGCHPRVLAQVLRHLLRHVGPAGREHSC 87
           SPPRP  G A+ ++ A +    + A  AQR+  G        +LR     +GPA R    
Sbjct: 80  SPPRP--GSARTQLVATSAAQAAAAGRAQRVRRG--------LLRWRTTALGPA-RPRLR 128

Query: 88  TGRQAGLAGRAALSLRPAPAALQITPLRRPKDQTTAPRAAEPPTSAHRRLLPFYNLAAAA 147
             R     G   L   PAP                 PRA  P     R L       AA+
Sbjct: 129 RPRHRLPGGSRRL---PAP----------------GPRAPAPGKGREREL----RTGAAS 165

Query: 148 RPRVLPARAGAPKTLCGAGAAATLRPREATEGTPGVRWAGVGRLPPHEGGLQVELAWDDR 207
             R  PAR G P+ L  A  A+T RPR    G P      V   PP  GGL      +  
Sbjct: 166 IDRA-PARTG-PEDL--AARASTRRPRGFRPGLP------VPTAPP--GGLAAAAKDETS 213

Query: 208 VSAEPRAFCPRFVTPRAPAVLLPRRV-SCGAGSRG 241
            +A  R   PR     A  V   R V SCGA + G
Sbjct: 214 CAARERGASPR---GDAGRVGRTRAVPSCGAPAVG 245


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,566,870
Number of Sequences: 37866
Number of extensions: 1195773
Number of successful extensions: 4968
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 4834
Number of HSP's gapped (non-prelim): 283
length of query: 459
length of database: 18,247,518
effective HSP length: 106
effective length of query: 353
effective length of database: 14,233,722
effective search space: 5024503866
effective search space used: 5024503866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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