Search of human proteins with 239748481

Search of human proteins with 239748481

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748481 PREDICTED: hypothetical protein [Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748481 PREDICTED: hypothetical protein [Homo sapiens]           409   e-115
gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo ...   407   e-114
gi|239753941 PREDICTED: hypothetical protein [Homo sapiens]           259   1e-69
gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]            34   0.094
gi|58218966 hypothetical protein LOC339201 [Homo sapiens]              33   0.21 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    32   0.36 
gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]            32   0.47 
gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]            31   0.61 
gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo ...    31   0.61 
gi|24475586 ependymin related protein 1 precursor [Homo sapiens]       31   0.61 
gi|13376064 zinc finger protein 408 [Homo sapiens]                     31   0.79 
gi|222418647 mucin 7, secreted precursor [Homo sapiens]                30   1.0  
gi|222418649 mucin 7, secreted precursor [Homo sapiens]                30   1.0  
gi|222418645 mucin 7, secreted precursor [Homo sapiens]                30   1.0  
gi|218563730 chemokine (C-X-C motif) receptor 3 isoform B [Homo ...    30   1.8  
gi|4504099 chemokine (C-X-C motif) receptor 3 isoform A [Homo sa...    30   1.8  
gi|126722969 centromere protein T [Homo sapiens]                       30   1.8  
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]        30   1.8  
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]            30   1.8  
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo...    30   1.8  
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo...    30   1.8  
gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens]         29   2.3  
gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens]         29   2.3  
gi|169168280 PREDICTED: hypothetical protein [Homo sapiens]            29   2.3  
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]          29   2.3  
gi|4501945 adrenomedullin [Homo sapiens]                               29   3.0  
gi|33946327 nucleoporin 214kDa [Homo sapiens]                          29   3.0  
gi|169214031 PREDICTED: hypothetical LOC646508 [Homo sapiens]          29   3.0  
gi|239756910 PREDICTED: hypothetical protein [Homo sapiens]            29   3.0  
gi|239756849 PREDICTED: hypothetical protein [Homo sapiens]            29   3.0  

>gi|239748481 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 199

 Score =  409 bits (1052), Expect = e-115
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MIKSFGCLSGRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTC 60
           MIKSFGCLSGRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTC
Sbjct: 1   MIKSFGCLSGRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTC 60

Query: 61  RGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVN 120
           RGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVN
Sbjct: 61  RGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVN 120

Query: 121 ERFRRSLWKGINSQLTLFGICLFRSCLLKKEGWEWKGAEWGRSAGISPAQILKIDEARKR 180
           ERFRRSLWKGINSQLTLFGICLFRSCLLKKEGWEWKGAEWGRSAGISPAQILKIDEARKR
Sbjct: 121 ERFRRSLWKGINSQLTLFGICLFRSCLLKKEGWEWKGAEWGRSAGISPAQILKIDEARKR 180

Query: 181 RLLKAELHLIPDHVTASRE 199
           RLLKAELHLIPDHVTASRE
Sbjct: 181 RLLKAELHLIPDHVTASRE 199


>gi|239742445 PREDICTED: hypothetical protein XP_002342517 [Homo
           sapiens]
          Length = 199

 Score =  407 bits (1046), Expect = e-114
 Identities = 198/199 (99%), Positives = 198/199 (99%)

Query: 1   MIKSFGCLSGRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTC 60
           MIKSFGCLSGRSATLEAPGTA RGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTC
Sbjct: 1   MIKSFGCLSGRSATLEAPGTAERGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTC 60

Query: 61  RGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVN 120
           RGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVN
Sbjct: 61  RGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVN 120

Query: 121 ERFRRSLWKGINSQLTLFGICLFRSCLLKKEGWEWKGAEWGRSAGISPAQILKIDEARKR 180
           ERFRRSLWKGINSQLTLFGICLFRSCLLKKEGWEWKGAEWGRSAGISPAQILKIDEARKR
Sbjct: 121 ERFRRSLWKGINSQLTLFGICLFRSCLLKKEGWEWKGAEWGRSAGISPAQILKIDEARKR 180

Query: 181 RLLKAELHLIPDHVTASRE 199
           RLLKAELHLIPDHVTASRE
Sbjct: 181 RLLKAELHLIPDHVTASRE 199


>gi|239753941 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 225

 Score =  259 bits (662), Expect = 1e-69
 Identities = 152/227 (66%), Positives = 156/227 (68%), Gaps = 30/227 (13%)

Query: 1   MIKSFGCLSGRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQ---- 56
           MIKSFGCLSGRSATLEAPGTAVRGSIAAEKRGTR         S   A   SASSQ    
Sbjct: 1   MIKSFGCLSGRSATLEAPGTAVRGSIAAEKRGTRSGSQLLRENSG--AARASASSQLKTR 58

Query: 57  -------------PDTCRGTRATLG---DAPSPPFSGSSQPVTPRKLRCGQ---SQRLQP 97
                        P  C G     G   +    P     Q V   +LR G    S    P
Sbjct: 59  KENERVWDRRTRAPSQCLGLLKRTGVKENLDPHPEIPREQVVGKPELRVGYPLLSPASSP 118

Query: 98  -----AQDTASFGHSHRFSSPLILHLVNERFRRSLWKGINSQLTLFGICLFRSCLLKKEG 152
                A++ ASFGHSHRFSSPLILHLVNERFRRSLWKGINSQLTLFGICLFRSCLLKKEG
Sbjct: 119 YPSAGARERASFGHSHRFSSPLILHLVNERFRRSLWKGINSQLTLFGICLFRSCLLKKEG 178

Query: 153 WEWKGAEWGRSAGISPAQILKIDEARKRRLLKAELHLIPDHVTASRE 199
           WEWKGAEWGRSAGISPAQILKIDEARKRRLLKAELHLIPDHVTASRE
Sbjct: 179 WEWKGAEWGRSAGISPAQILKIDEARKRRLLKAELHLIPDHVTASRE 225


>gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 33.9 bits (76), Expect = 0.094
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 16/150 (10%)

Query: 15  LEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPP 74
           LE+P         A   G R+WG     G  PR   T A + P T   T     DAP P 
Sbjct: 32  LESPPHPETQRPRAGAGGRRRWG--ATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPG 89

Query: 75  FSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVNERFRRSLWKGINSQ 134
               S     R    G+  R +    +A+         PL +   + R +  LW+G + Q
Sbjct: 90  RGRFS-----RTRGDGKRARTEAPSGSAA-------EKPLPVAAADGRLKLQLWRGASPQ 137

Query: 135 LTLFGICLFRSCLLKKEGWEWKGAEWGRSA 164
           + +   C  ++ L +     WK + W + +
Sbjct: 138 VAV--KCFVQTKLQRLLPNRWKQSVWTKES 165


>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
          Length = 193

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 7   CLSGRSATLEAPGTAVRGSIAAEKRGTRKWGWACA-LGSAPRATPTSASSQPDTCRGTRA 65
           C +   A    PG  ++   A    G  + G AC+ LG  P+ TP SA S+P  C G R 
Sbjct: 73  CAAACGACARPPGHQLQPPGA----GAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRR 128

Query: 66  TLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQP 97
                  P  +    P  P +       RL P
Sbjct: 129 RHAPGTEPHVAPGRAP--PPRAGASPGSRLLP 158


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 15  LEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRA--TLGDAPS 72
           L A G   R  +A    G    G A    SAPRA PT  S  P + RG RA      +P 
Sbjct: 47  LGAAGAVGRKPLAERAGGI---GGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPG 103

Query: 73  PPFSGSSQPVTPRKLRCGQSQRLQPAQDTASFG 105
           P  S      T R    GQ      A++T + G
Sbjct: 104 PVSSPGRASGTTRPGPLGQKGLRISAEETVARG 136


>gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 16/150 (10%)

Query: 15  LEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPP 74
           LE+P         A   G R+WG     G  PR   T A + P T   T     DAP P 
Sbjct: 32  LESPPHPETQRPRAGAGGRRRWG--ATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPG 89

Query: 75  FSGSSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVNERFRRSLWKGINSQ 134
               S     R    G+  R +    +A+         PL     + R +  LW+G + Q
Sbjct: 90  RGRFS-----RTRGDGKRARTEAPSGSAA-------EKPLPGAAADGRLKLRLWRGASPQ 137

Query: 135 LTLFGICLFRSCLLKKEGWEWKGAEWGRSA 164
           + +   C  ++ L +     WK + W + +
Sbjct: 138 VAV--KCFVQTKLQRLLPNRWKQSVWTKES 165


>gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 242

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 17/86 (19%)

Query: 10  GRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGD 69
           G  A    PG   R  + A   G RK      +GSAP      A S     RG +A +G 
Sbjct: 146 GGGARAPGPGPGSRQPLPAGLHGRRK------VGSAPDRHGLGAGSAG--ARGNKAVVGP 197

Query: 70  APSPPFSGSSQPVTPRKLRCGQSQRL 95
           +P PP          R+L  G   RL
Sbjct: 198 SPPPP---------GRRLHSGSESRL 214


>gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo
           sapiens]
          Length = 242

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 17/86 (19%)

Query: 10  GRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGD 69
           G  A    PG   R  + A   G RK      +GSAP      A S     RG +A +G 
Sbjct: 146 GGGARAPGPGPGSRQPLPAGLHGRRK------VGSAPDRHGLGAGSAG--ARGNKAVVGP 197

Query: 70  APSPPFSGSSQPVTPRKLRCGQSQRL 95
           +P PP          R+L  G   RL
Sbjct: 198 SPPPP---------GRRLHSGSESRL 214


>gi|24475586 ependymin related protein 1 precursor [Homo sapiens]
          Length = 344

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 54/201 (26%), Positives = 77/201 (38%), Gaps = 45/201 (22%)

Query: 25  SIAAEKR-GTRKWGWACALGSAP-----RATPTSASSQPDTCRGTRATLGDAPSPPFSGS 78
           ++++E R G R+W  A A GS P     RA   S         GTRA          SGS
Sbjct: 18  AVSSENRSGRRQWQQAVAAGSGPGRNSSRAIHWSLPRALVPATGTRA----------SGS 67

Query: 79  SQPVTPRKLRCGQSQRLQPAQDTASFGHSH----RFSSPLILHLVNERFRRSLWKG---- 130
            +   P K +     R          G SH    R S+PL L L + R R +   G    
Sbjct: 68  QKRQRPPKGQEALWSRPHSRHSAERAGGSHSDPGRLSAPLGLGLPSGRGRLTAMPGRAPL 127

Query: 131 ------INSQL-------TLFGICLF------RSCLLKKEGWEWKGAEWGRSAGISPAQI 171
                 + + L       TL G+C        R C   ++ WE +   + +S+G +   +
Sbjct: 128 RTVPGALGAWLLGGLWAWTLCGLCSLGAVGAPRPCQAPQQ-WEGRQVMYQQSSGRNSRAL 186

Query: 172 LKIDEARKR-RLLKAELHLIP 191
           L  D   +R R+L     LIP
Sbjct: 187 LSYDGLNQRVRVLDERKALIP 207


>gi|13376064 zinc finger protein 408 [Homo sapiens]
          Length = 720

 Score = 30.8 bits (68), Expect = 0.79
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 8   LSGRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAP--RATPTSASSQPDTCRGTRA 65
           L   SAT + P  +   S ++  RGT+  G+      +P  +  P + + +P   +    
Sbjct: 275 LQSNSATQQDPDGS-GASFSSSARGTQPHGYLAKKLHSPSDQCPPRAKTPEPGAQQSGFP 333

Query: 66  TLGDAPSPPFSGSSQPVTPRKLRCGQ 91
           TL  + SPP    S P   R+ RCG+
Sbjct: 334 TL--SRSPPGPAGSSPKQGRRYRCGE 357


>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 18/59 (30%), Positives = 25/59 (42%)

Query: 44  SAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTA 102
           SA    P+SAS+ P+T           P+PP S + Q  T   +    S     A DT+
Sbjct: 265 SATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTS 323


>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 18/59 (30%), Positives = 25/59 (42%)

Query: 44  SAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTA 102
           SA    P+SAS+ P+T           P+PP S + Q  T   +    S     A DT+
Sbjct: 265 SATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTS 323


>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
          Length = 377

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 18/59 (30%), Positives = 25/59 (42%)

Query: 44  SAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQPAQDTA 102
           SA    P+SAS+ P+T           P+PP S + Q  T   +    S     A DT+
Sbjct: 265 SATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTS 323


>gi|218563730 chemokine (C-X-C motif) receptor 3 isoform B [Homo
           sapiens]
          Length = 415

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 89  CGQSQRLQPAQD-TASFGHSHRFSSPLILHLVNERFRRSLW 128
           CG+  R+  A+  T+  G+ H   +PL+   V  +FR  +W
Sbjct: 337 CGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMW 377


>gi|4504099 chemokine (C-X-C motif) receptor 3 isoform A [Homo
           sapiens]
          Length = 368

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 89  CGQSQRLQPAQD-TASFGHSHRFSSPLILHLVNERFRRSLW 128
           CG+  R+  A+  T+  G+ H   +PL+   V  +FR  +W
Sbjct: 290 CGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMW 330


>gi|126722969 centromere protein T [Homo sapiens]
          Length = 561

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 11/105 (10%)

Query: 10  GRSATLEAPGTAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTR--ATL 67
           G +   EA G+  +G+  A+  G    G   A G A  A+P SASS P++ +  R    L
Sbjct: 363 GHTEVTEAEGS--QGTAEADGPGASS-GDEDASGRA--ASPESASSTPESLQARRHHQFL 417

Query: 68  GDAPSPPFSG-SSQPVTPRKLRCGQSQRL---QPAQDTASFGHSH 108
             AP+P  +  SS+P  P  +R     R    +P QD    G SH
Sbjct: 418 EPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHKAGLSH 462


>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
          Length = 2089

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 42   LGSAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPR-KLRCGQSQRLQPAQD 100
            L   P  +P   S +P   +  +    +AP  P S   +P  P+ K+R  +S R+ P   
Sbjct: 1061 LAPPPLLSPLLPSIKPTVRKTRQDGSQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPA 1120

Query: 101  TASFGHSHRFSS 112
            T++    H  +S
Sbjct: 1121 TSAAPEPHPSTS 1132


>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 551

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 10/89 (11%)

Query: 17  APGTAVRGSIAA----EKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATL--GDA 70
           APG   R  + A      RG       CALG   R +  +  +QP      RA L     
Sbjct: 354 APGHWARPRVRALLWDAGRGAAAGRGLCALGGTKRGSQAATGAQPSVAT-WRAVLPRTPP 412

Query: 71  PSPPFS-GSSQPVTPRKLRCGQSQRLQPA 98
           PSPP S G   P  P  +  GQ+Q L+ A
Sbjct: 413 PSPPGSQGRQGPEPPSPV--GQAQALEEA 439


>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
           sapiens]
          Length = 870

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 9   SGRSAT-LEAPGTAVRGSIAA-EKRGTRKWGWACALGSAP-----RATPTSASSQPDTC- 60
           S RSA+ +E PG A+   +A  E R  R  G    L  +P     +  P   +++P    
Sbjct: 613 SERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSW 672

Query: 61  ---RGTRATLGDAPSPPFSGSSQPVTPRK 86
              + + A  G APSPP  GS    +P K
Sbjct: 673 IHGKHSAAAAGRAPSPPPPGSEAAPSPSK 701


>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
           sapiens]
          Length = 865

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 9   SGRSAT-LEAPGTAVRGSIAA-EKRGTRKWGWACALGSAP-----RATPTSASSQPDTC- 60
           S RSA+ +E PG A+   +A  E R  R  G    L  +P     +  P   +++P    
Sbjct: 608 SERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSW 667

Query: 61  ---RGTRATLGDAPSPPFSGSSQPVTPRK 86
              + + A  G APSPP  GS    +P K
Sbjct: 668 IHGKHSAAAAGRAPSPPPPGSEAAPSPSK 696


>gi|58761506 sarcoma antigen NY-SAR-48 isoform b [Homo sapiens]
          Length = 409

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/45 (35%), Positives = 18/45 (40%)

Query: 43  GSAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKL 87
           G AP+ TP S    P            +PS  FS SSQ   P  L
Sbjct: 357 GGAPKNTPLSEDDNPGASSAPAQATFISPSEDFSSSSQAEVPPSL 401


>gi|58761504 sarcoma antigen NY-SAR-48 isoform a [Homo sapiens]
          Length = 410

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/45 (35%), Positives = 18/45 (40%)

Query: 43  GSAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKL 87
           G AP+ TP S    P            +PS  FS SSQ   P  L
Sbjct: 358 GGAPKNTPLSEDDNPGASSAPAQATFISPSEDFSSSSQAEVPPSL 402


>gi|169168280 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 124

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 14/127 (11%)

Query: 38  WACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKLRCGQSQRLQP 97
           W    G  PR   T A + P T   T     DAP P     S     R    G+  R + 
Sbjct: 4   WGATGGEGPRRPATRACADPGTRPFTYRWNRDAPFPGRGRFS-----RTRGDGKRARTEA 58

Query: 98  AQDTASFGHSHRFSSPLILHLVNERFRRSLWKGINSQLTLFGICLFRSCLLKKEGWEWKG 157
              +A+         PL     + R +  LW+G + Q+ +   C  ++ L +     WK 
Sbjct: 59  PSGSAA-------EKPLPGAAADGRLKLRLWRGASPQVAV--KCFVQTKLQRLLPNRWKQ 109

Query: 158 AEWGRSA 164
           + W + +
Sbjct: 110 SVWTKES 116


>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
          Length = 379

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 40  CALGSAPRATPTS-ASSQPDTCRGTRATLGDAPSPPFSGSSQPVTP 84
           C     PR + TS AS+ P    G     G A SPP   SS+P +P
Sbjct: 140 CPAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSP 185


>gi|4501945 adrenomedullin [Homo sapiens]
          Length = 185

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 78  SSQPVTPRKLRCGQSQRLQPAQDTASFGHSHRFSSPLILHLVNERFRRSL--WKGINSQL 135
           SS P     ++ G +Q L   QD      S   SSP    +  +R+R+S+  ++G+ S  
Sbjct: 50  SSYPTGLADVKAGPAQTLIRPQDMKGASRSPEDSSPDAARIRVKRYRQSMNNFQGLRS-- 107

Query: 136 TLFGICLFRSCLLKK 150
             FG C F +C ++K
Sbjct: 108 --FG-CRFGTCTVQK 119


>gi|33946327 nucleoporin 214kDa [Homo sapiens]
          Length = 2090

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 20   TAVRGSIAAEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSS 79
            TA +G+  + K  ++   ++   GS P       SS P    G  +     P  P + SS
Sbjct: 1237 TAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPS---GITSASNTTPGEPAASSS 1293

Query: 80   QPVTP 84
            +PV P
Sbjct: 1294 RPVAP 1298


>gi|169214031 PREDICTED: hypothetical LOC646508 [Homo sapiens]
          Length = 560

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 39  ACALGS--APRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQ 80
           A  LGS  AP+AT  +A+++  T +  R  L  APS PF G +Q
Sbjct: 432 ATGLGSKEAPKATAETAATKTATLQ-PRVNLQPAPSSPFLGPAQ 474


>gi|239756910 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 155

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 145 SCLLKKEGWEWK-GAEWGRSAGISPAQILKIDEARKRRLL 183
           +CL  K GW  + G +W R  G+ P Q L + EA   R+L
Sbjct: 25  TCL--KRGWSQQDGHKWERGRGVGPHQPLPVPEAAAWRVL 62


>gi|239756849 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 28  AEKRGTRKWGWACALGSAPRATPTSASSQPDTCRGTRATLGDAPSPPFSGSSQPVTPRKL 87
           A ++G R WGW+    +        A   P    G+RA    AP+P +S    P +P   
Sbjct: 101 AREKGGRGWGWSTPTANPRLCREARACGGP----GSRARTPAAPAPLWS-LPMPTSPLPP 155

Query: 88  RC-GQSQRLQPAQDTASFG 105
              GQ Q  +P  D+A  G
Sbjct: 156 GVGGQPQLGKPTVDSAWSG 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,386,564
Number of Sequences: 37866
Number of extensions: 386304
Number of successful extensions: 2126
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 1851
Number of HSP's gapped (non-prelim): 362
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.