Guide to the Human Genome
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Name: LOC100288697 Sequence: fasta or formatted (67aa) NCBI GI: 239748402
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {67aa} PREDICTED: hypothetical protein XP_002342494
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            29.9         20           4
 C cysteine            1.5          1           1
 D aspartate           1.5          1           1
 E glutamate           1.5          1           1
 F phenylalanine       3.0          2           1
 G glycine            13.4          9           1
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             0.0          0           0
 M methionine          1.5          1           1
 N asparagine          1.5          1           1
 P proline            25.4         17           4
 Q glutamine           0.0          0           0
 R arginine            3.0          2           1
 S serine              3.0          2           1
 T threonine           4.5          3           1
 V valine              7.5          5           1
 W tryptophan          3.0          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100293375          1.000   PREDICTED: hypothetical protein 
LOC100288697          1.000   PREDICTED: hypothetical protein XP_002342494 
CDKN1C                0.139   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.139   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.139   cyclin-dependent kinase inhibitor 1C isoform a 
SAMD1                 0.139   sterile alpha motif domain containing 1 
PHOX2B                0.131   paired-like homeobox 2b 
TAF4                  0.107   TBP-associated factor 4 
DMRT3                 0.107   doublesex and mab-3 related transcription factor 3 [...
FOXD2                 0.107   forkhead box D2 
LGALS3                0.098   galectin 3 
KIF13B                0.098   kinesin family member 13B 
COL15A1               0.098   alpha 1 type XV collagen precursor 
STK39                 0.098   serine threonine kinase 39 (STE20/SPS1 homolog, yea...
FAM48B1               0.098   hypothetical protein LOC100130302 
DIAPH1                0.090   diaphanous 1 isoform 2 
DIAPH1                0.090   diaphanous 1 isoform 1 
EIF3F                 0.090   eukaryotic translation initiation factor 3, subunit 5...
COL1A1                0.082   alpha 1 type I collagen preproprotein 
LOC100128074          0.082   PREDICTED: hypothetical protein 
BCORL1                0.082   BCL6 co-repressor-like 1 
ECOP                  0.082   EGFR-coamplified and overexpressed protein 
SYNJ1                 0.082   synaptojanin 1 isoform a 
SYNJ1                 0.082   synaptojanin 1 isoform b 
LOC729086             0.082   PREDICTED: similar to EGFR-coamplified and overexpr...
LOC729086             0.082   PREDICTED: similar to EGFR-coamplified and overexpr...
FMNL1                 0.082   formin-like 1 
C9orf86               0.082   Rab-like GTP-binding protein 1 isoform 1 
PLSCR1                0.082   phospholipid scramblase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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