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Search of human proteins with 239747641
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ... 399 e-112
gi|239741505 PREDICTED: hypothetical protein XP_002342218 [Homo ... 206 1e-53
gi|89941470 ankyrin repeat domain 34 [Homo sapiens] 49 2e-06
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 47 8e-06
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 47 1e-05
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 45 3e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 45 4e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 45 4e-05
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 45 4e-05
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 45 5e-05
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 44 7e-05
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 44 7e-05
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 44 7e-05
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 44 7e-05
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 44 7e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 9e-05
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 44 1e-04
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 2e-04
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 2e-04
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 2e-04
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 42 2e-04
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 42 2e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 42 2e-04
>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
sapiens]
Length = 193
Score = 399 bits (1025), Expect = e-112
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60
MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ
Sbjct: 1 MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60
Query: 61 QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTP 120
QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTP
Sbjct: 61 QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTP 120
Query: 121 GNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPP 180
GNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPP
Sbjct: 121 GNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPP 180
Query: 181 GGGAERGTRTVVL 193
GGGAERGTRTVVL
Sbjct: 181 GGGAERGTRTVVL 193
>gi|239741505 PREDICTED: hypothetical protein XP_002342218 [Homo
sapiens]
Length = 343
Score = 206 bits (523), Expect = 1e-53
Identities = 111/144 (77%), Positives = 111/144 (77%), Gaps = 15/144 (10%)
Query: 1 MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60
MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ
Sbjct: 1 MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60
Query: 61 QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTP 120
QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGD G
Sbjct: 61 QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGD--------------GWVVE 106
Query: 121 GNRGGERRGERRAP-PRPAGAPRG 143
R G AP P P G RG
Sbjct: 107 SRRRGNAPDSGTAPTPLPLGRVRG 130
>gi|89941470 ankyrin repeat domain 34 [Homo sapiens]
Length = 496
Score = 49.3 bits (116), Expect = 2e-06
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 26/165 (15%)
Query: 36 QLQVPLSGAEGKELLAAQAAHRPRQQQRQQQR-----PRPRSPDPAARGQHVPELRSRKP 90
++Q+ +G G+ +L+ PR Q+ +++R P P+ PD + + +P+ P
Sbjct: 186 EIQLQTAGGGGRGMLS------PRAQEEEEKRDVFEFPLPKPPDDPSPSEPLPKPPRHPP 239
Query: 91 GPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRPAGAPRGSPMAARG 150
P R + PW P P PT G G ER G PR ++ R
Sbjct: 240 KPLKR------LNSEPWGLVAPPQPVPPTEGRPGIERLTAEFNGLTLTGRPR---LSRRH 290
Query: 151 RARGEAEPP-----ALGAGACDSRN-QPDSQRTAPPGGGAERGTR 189
G +PP G RN P++Q + PP G ++ +R
Sbjct: 291 STEGPEDPPPWAEKVTSGGPLSRRNTAPEAQESGPPSGLRQKLSR 335
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 47.4 bits (111), Expect = 8e-06
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
Query: 49 LLAAQAAHRPRQQQRQQQRP-----RPRSPDPAARGQHVPELRSRKPG-PAARTEEGGDV 102
LLA +A + Q++ P P+ P P +G + P+ PG P +GG+
Sbjct: 10 LLALSSAQNLNEDVSQEESPSLIAGNPQGPSP--QGGNKPQGPPPPPGKPQGPPPQGGNK 67
Query: 103 TGRPWQPPLLPPPGVPTPGNRGGERR---GERRAPPRPAGAPRGSPMAARGRARGEAEPP 159
P PP P G P G++ R G+ + PP G P+G P +++ PP
Sbjct: 68 PQGP--PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPP 125
Query: 160 ALGAGACDSRNQPDSQRTAPPGGG 183
G + Q PP GG
Sbjct: 126 GKPQGPPQQEGN-NPQGPPPPAGG 148
Score = 38.1 bits (87), Expect = 0.005
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 27/127 (21%)
Query: 69 RPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPT-PGNRGGER 127
+P+ P P + Q P + P + G+P PP P G P P +GG +
Sbjct: 67 KPQGPPPPGKPQGPPPQGDKSRSPRSPP-------GKPQGPP--PQGGKPQGPPAQGGSK 117
Query: 128 RGERRAPP-RPAGAPR-------GSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAP 179
R+PP +P G P+ G P A G + PPA QP P
Sbjct: 118 SQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA---------GQPQGPPRPP 168
Query: 180 PGGGAER 186
GG R
Sbjct: 169 QGGRPSR 175
Score = 36.2 bits (82), Expect = 0.018
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 24/97 (24%)
Query: 92 PAARTEEGGDVTGRPWQPPLLPPPGVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARG 150
P + +GG+ +P PP PPPG P P +GG + + PP P G P+G
Sbjct: 36 PQGPSPQGGN---KPQGPP--PPPGKPQGPPPQGGNKP---QGPP-PPGKPQG------- 79
Query: 151 RARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAERG 187
PP G + R+ P + PP GG +G
Sbjct: 80 -------PPPQGDKSRSPRSPPGKPQGPPPQGGKPQG 109
Score = 30.4 bits (67), Expect = 0.98
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 66 QRPRPRSP-DPAARGQHVPELRSRKPGPAA----RTEEGGDVTGRPWQPPLL-------- 112
Q + RSP P + Q P + GP A +++ G+P PP
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP 142
Query: 113 PPPGVPTPGNRGGERRGERRAPPRPAGAPRGS 144
PPP P G+ + PPRP R S
Sbjct: 143 PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPS 174
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 47.0 bits (110), Expect = 1e-05
Identities = 42/136 (30%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 26 GRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPEL 85
GR E+ ++ L +P+ + +++ Q H Q +R QQ+ +PD
Sbjct: 220 GRGKELKILVLLLLPVQSGQQRQVEQLQHRH---QHERGQQQLVEGAPDGVGHLHG---- 272
Query: 86 RSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPG--NRGGERRGERRAPPRPAGAPRG 143
SR G AA T RP P P +P P +RG R E RAPPRP A R
Sbjct: 273 -SRGSGRAATTT-------RPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARR 324
Query: 144 SPMAARGRARGEAEPP 159
P A R PP
Sbjct: 325 PPPATAPSPRRAGSPP 340
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 46.6 bits (109), Expect = 1e-05
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 31/143 (21%)
Query: 58 PRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPP------- 110
P Q Q Q P P P + Q P KP +G G+P PP
Sbjct: 184 PPQGGNQPQGP----PPPPGKPQGPPPQGGNKP-------QGPPPPGKPQGPPPQGDNKS 232
Query: 111 --LLPPPGVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARG-------EAEPPA 160
PPG P P +GG + + PP P G P+G P + +G + PP
Sbjct: 233 QSARSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 289
Query: 161 LGAGACDSRNQPDSQRTAPPGGG 183
G+ + SR+ P + PP GG
Sbjct: 290 GGSKSRSSRSPPGKPQGPPPQGG 312
Score = 45.1 bits (105), Expect = 4e-05
Identities = 45/173 (26%), Positives = 66/173 (38%), Gaps = 29/173 (16%)
Query: 37 LQVPLSGAEGKELLAAQAAHRPRQQQRQQQRP-----RPRSPDPAA----RGQHVPELRS 87
L +S E L+A P Q + Q P +P+ P P +G P +
Sbjct: 19 LNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKP 78
Query: 88 RKPGPAARTE-EGGDVTGRPWQPPLL--------PPPGVPT-PGNRGGERRGERRAPPRP 137
+ P P + +G G+P PP PPG P P +GG + + PP P
Sbjct: 79 QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN---QPQGPPPP 135
Query: 138 AGAPRGSPMAARGRARG-------EAEPPALGAGACDSRNQPDSQRTAPPGGG 183
G P+G P + +G + PP + SR+ P + PP GG
Sbjct: 136 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGG 188
Score = 44.7 bits (104), Expect = 5e-05
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 58 PRQQQRQQQRPRPRSPD-PAARGQHVPELRSRKPG-PAARTEEGGDVTGRPWQPPLLPPP 115
P+ + Q P P P P +G + + PG P +GG+ +P PP PPP
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGN---QPQGPP--PPP 260
Query: 116 GVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAG-ACDSRNQPD 173
G P P +GG + + PP P G P+G P ++R PP G NQP
Sbjct: 261 GKPQGPPPQGGNKP---QGPP-PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQP- 315
Query: 174 SQRTAPPGG 182
Q PP G
Sbjct: 316 -QGPPPPPG 323
Score = 44.7 bits (104), Expect = 5e-05
Identities = 39/129 (30%), Positives = 51/129 (39%), Gaps = 13/129 (10%)
Query: 58 PRQQQRQQQRPRPRSPD--PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPP 115
P+ + Q P P P P G RS P +GG+ +P PP PPP
Sbjct: 268 PQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGN---QPQGPP--PPP 322
Query: 116 GVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDS 174
G P P +GG + + PP P G P+G P ++R PP G +
Sbjct: 323 GKPQGPPPQGGNKP---QGPP-PPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGN-NP 377
Query: 175 QRTAPPGGG 183
Q PP GG
Sbjct: 378 QGPPPPAGG 386
Score = 44.3 bits (103), Expect = 7e-05
Identities = 41/128 (32%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 58 PRQQQRQQQRPRPRSPD-PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPG 116
P+ + Q P P P P +G RS P +GG+ +P PP PPPG
Sbjct: 83 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN---QPQGPP--PPPG 137
Query: 117 VPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAG-ACDSRNQPDS 174
P P +GG + + PP P G P+G P ++R PP G NQP
Sbjct: 138 KPQGPPPQGGNKP---QGPP-PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQP-- 191
Query: 175 QRTAPPGG 182
Q PP G
Sbjct: 192 QGPPPPPG 199
Score = 42.0 bits (97), Expect = 3e-04
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 15/129 (11%)
Query: 58 PRQQQRQQQRPRPRSPD-PAARGQHVPELRSRKPG-PAARTEEGGDVTGRPWQPPLLPPP 115
P+ + Q P P P P +G + PG P +GG+ +P PP PPP
Sbjct: 144 PQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGN---QPQGPP--PPP 198
Query: 116 GVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAG-ACDSRNQPD 173
G P P +GG + + PP P G P+G P +++ PP G NQP
Sbjct: 199 GKPQGPPPQGGNKP---QGPP-PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP- 253
Query: 174 SQRTAPPGG 182
Q PP G
Sbjct: 254 -QGPPPPPG 261
Score = 41.2 bits (95), Expect = 6e-04
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 18/148 (12%)
Query: 49 LLAAQAAHRPRQQQRQQQRPRPRSPDPAA---RGQHVPELRSRKPG-PAARTEEGGDVTG 104
LLA +A + Q++ P + +P +G + P+ PG P +GG+
Sbjct: 10 LLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGN--- 66
Query: 105 RPWQPPLLPPPGVPT-PGNRGGERRGERRAPPRPAGAP-----RGSPMAARGRARGEAEP 158
+P PP PPPG P P +GG + P +P G P SP + G+ +G P
Sbjct: 67 QPQGPP--PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG---P 121
Query: 159 PALGAGACDSRNQPDSQRTAPPGGGAER 186
P G P + PP G +
Sbjct: 122 PPQGGNQPQGPPPPPGKPQGPPPQGGNK 149
Score = 40.0 bits (92), Expect = 0.001
Identities = 38/136 (27%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 61 QQRQQQRPRPRSPDPAARGQHVPELRSRKPG-PAARTEEGGDVTGRPWQPPLLPPPGVPT 119
+ R + P + P +G + P+ PG P +GG+ +P PP PPG P
Sbjct: 293 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN---KPQGPP---PPGKPQ 346
Query: 120 -PGNRGGERR-------GERRAPPRPAG-APRGSPMAARGRARGEAEPPALGAGACDSRN 170
P +GG + G+ + PP+ G P+G P A G + PPA
Sbjct: 347 GPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA---------G 397
Query: 171 QPDSQRTAPPGGGAER 186
QP P GG R
Sbjct: 398 QPQGPPRPPQGGRPSR 413
Score = 31.6 bits (70), Expect = 0.44
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 114 PPGVPTPGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPA-------LGAGAC 166
P G P G G + +G PP P G P+G P + +G PP G
Sbjct: 36 PQGAPPQG--GNKPQG----PPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 89
Query: 167 DSRNQPDSQRTAPPGGGAERGTRT 190
P + PP G R R+
Sbjct: 90 QGPPPPGKPQGPPPQGDKSRSPRS 113
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 45.4 bits (106), Expect = 3e-05
Identities = 43/143 (30%), Positives = 53/143 (37%), Gaps = 23/143 (16%)
Query: 58 PRQQQRQQQRPRPRSPD-PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQ----PPLL 112
P+ + Q P P P P +G RS P +GG G P Q P
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGP 121
Query: 113 PPPGVPT-PGNRGGERRGERRAPP-RPAGAPR-------GSPMAARGRARGEAEPPALGA 163
PPPG P P +GG + R+PP +P G P+ G P A G + PPA
Sbjct: 122 PPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA--- 178
Query: 164 GACDSRNQPDSQRTAPPGGGAER 186
QP P GG R
Sbjct: 179 ------GQPQGPPRPPQGGRPSR 195
Score = 41.2 bits (95), Expect = 6e-04
Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 26/160 (16%)
Query: 49 LLAAQAAHRPRQQQRQQQRP-----RPRSPDPAA----RGQHVPELRSRKPGPAARTE-E 98
LLA +A + Q++ P P+ P P +G P + + P P + +
Sbjct: 10 LLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQ 69
Query: 99 GGDVTGRPWQPPLL--------PPPGVPT-PGNRGGERRG------ERRAPPRPAGAPRG 143
G G+P PP PPG P P +GG+ +G + P P G P+G
Sbjct: 70 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQG 129
Query: 144 SPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGG 183
P +++ PP G + Q PP GG
Sbjct: 130 PPAQGGSKSQSARSPPGKPQGPPQQEGN-NPQGPPPPAGG 168
Score = 36.2 bits (82), Expect = 0.018
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 24/97 (24%)
Query: 92 PAARTEEGGDVTGRPWQPPLLPPPGVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARG 150
P + +GG+ +P PP PPPG P P +GG + + PP P G P+G
Sbjct: 36 PQGPSPQGGN---KPQGPP--PPPGKPQGPPPQGGNKP---QGPP-PPGKPQG------- 79
Query: 151 RARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAERG 187
PP G + R+ P + PP GG +G
Sbjct: 80 -------PPPQGDKSRSPRSPPGKPQGPPPQGGKPQG 109
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 45.1 bits (105), Expect = 4e-05
Identities = 52/178 (29%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 28 RDEVIPVLQLQVPLSGA---EGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPE 84
RD +I V+ +PL G E K+L+ ++ Q +QR R SP + GQ
Sbjct: 381 RDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNK-MAQALPRQRQRDASPGRGSHGQ---- 435
Query: 85 LRSRKPGPAARTEEGGDVTGRPWQPPLL--PPP--GVPTPGNRGGERRG---ERRAPPRP 137
P P A G + +P PP PPP G P PG G +R+G ++R PP+
Sbjct: 436 ----TPSPGA-LPLGRQTSQQPAGPPAQQRPPPQGGPPQPGP-GPQRQGPPLQQRPPPQG 489
Query: 138 A------GAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAERGTR 189
G P GSP+ R + A A ++ Q R G GA R
Sbjct: 490 QQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAAR 547
Score = 44.3 bits (103), Expect = 7e-05
Identities = 42/152 (27%), Positives = 57/152 (37%), Gaps = 27/152 (17%)
Query: 59 RQQQRQQQRPRPRS---------PDPAARGQHVPELRSRKPGPAART--------EEGGD 101
RQ QQRP P+ P + Q +P S PA++ +
Sbjct: 476 RQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP 535
Query: 102 VTGRPWQPPLLPPPGVPTPGNRGGERRGERR------APPRPAGAPRGSP--MAARGRAR 153
V G P PP PP P+P + G + R+ APP+ +GAP G +
Sbjct: 536 VAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP 595
Query: 154 GEAEP--PALGAGACDSRNQPDSQRTAPPGGG 183
G A P A AG P +Q+ P G G
Sbjct: 596 GPAGPTRQASQAGPVPRTGPPTTQQPRPSGPG 627
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/156 (28%), Positives = 56/156 (35%), Gaps = 7/156 (4%)
Query: 38 QVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTE 97
Q P GA +Q P QQR + P P P + Q P L+ R P +
Sbjct: 435 QTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQG-PPLQQRPPPQGQQHL 493
Query: 98 EG-GDVTGRPWQPPLLPPPGVP-TPGNRGGERRGERRAPPRPAGAPRGSPMAARGRA--- 152
G G G P L P P P ++ + RP G+P AAR A
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPS 553
Query: 153 -RGEAEPPALGAGACDSRNQPDSQRTAPPGGGAERG 187
+ +A PP S P APPGG +G
Sbjct: 554 PQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQG 589
Score = 35.8 bits (81), Expect = 0.023
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 31/156 (19%)
Query: 17 EAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPA 76
+A PTQ QGR+ P++G G A AA P Q+Q P A
Sbjct: 521 QAAPPTQGQGRQSR---------PVAGGPG----APPAARPPASPSPQRQA----GPPQA 563
Query: 77 ARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRA--- 133
R V GPA G G+ Q P PPG P + + R
Sbjct: 564 TRQTSVS-------GPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPP 616
Query: 134 ---PPRPAG-APRGSPMAARGRARGEAEPPALGAGA 165
PRP+G P G P + + PP A A
Sbjct: 617 TTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAA 652
Score = 32.7 bits (73), Expect = 0.20
Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 23/103 (22%)
Query: 43 GAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPG----PAARTEE 98
G G A+QA PR Q+PRP P PA R + P+L ++KP P A
Sbjct: 596 GPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPK--PQL-AQKPSQDVPPPATAAA 652
Query: 99 GGDVTGRPWQPPL-----------LPPPGVPTPGNRGGERRGE 130
GG P P L LP P P P E + E
Sbjct: 653 GG-----PPHPQLNKSQSLTNAFNLPEPAPPRPSLSQDEVKAE 690
Score = 30.8 bits (68), Expect = 0.75
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 55 AHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPP 114
A+ P QRP+P P P G H P PGP T E R
Sbjct: 15 ANLPNGYMTDLQRPQPPPPPP---GAHSP---GATPGPGTATAE------RSSGVAPAAS 62
Query: 115 PGVPTPGNRGG 125
P P+PG+ GG
Sbjct: 63 PAAPSPGSSGG 73
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 45.1 bits (105), Expect = 4e-05
Identities = 52/178 (29%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 28 RDEVIPVLQLQVPLSGA---EGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPE 84
RD +I V+ +PL G E K+L+ ++ Q +QR R SP + GQ
Sbjct: 381 RDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNK-MAQALPRQRQRDASPGRGSHGQ---- 435
Query: 85 LRSRKPGPAARTEEGGDVTGRPWQPPLL--PPP--GVPTPGNRGGERRG---ERRAPPRP 137
P P A G + +P PP PPP G P PG G +R+G ++R PP+
Sbjct: 436 ----TPSPGA-LPLGRQTSQQPAGPPAQQRPPPQGGPPQPGP-GPQRQGPPLQQRPPPQG 489
Query: 138 A------GAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAERGTR 189
G P GSP+ R + A A ++ Q R G GA R
Sbjct: 490 QQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAAR 547
Score = 44.3 bits (103), Expect = 7e-05
Identities = 42/152 (27%), Positives = 57/152 (37%), Gaps = 27/152 (17%)
Query: 59 RQQQRQQQRPRPRS---------PDPAARGQHVPELRSRKPGPAART--------EEGGD 101
RQ QQRP P+ P + Q +P S PA++ +
Sbjct: 476 RQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP 535
Query: 102 VTGRPWQPPLLPPPGVPTPGNRGGERRGERR------APPRPAGAPRGSP--MAARGRAR 153
V G P PP PP P+P + G + R+ APP+ +GAP G +
Sbjct: 536 VAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP 595
Query: 154 GEAEP--PALGAGACDSRNQPDSQRTAPPGGG 183
G A P A AG P +Q+ P G G
Sbjct: 596 GPAGPTRQASQAGPVPRTGPPTTQQPRPSGPG 627
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/156 (28%), Positives = 56/156 (35%), Gaps = 7/156 (4%)
Query: 38 QVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTE 97
Q P GA +Q P QQR + P P P + Q P L+ R P +
Sbjct: 435 QTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQG-PPLQQRPPPQGQQHL 493
Query: 98 EG-GDVTGRPWQPPLLPPPGVP-TPGNRGGERRGERRAPPRPAGAPRGSPMAARGRA--- 152
G G G P L P P P ++ + RP G+P AAR A
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPS 553
Query: 153 -RGEAEPPALGAGACDSRNQPDSQRTAPPGGGAERG 187
+ +A PP S P APPGG +G
Sbjct: 554 PQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQG 589
Score = 35.8 bits (81), Expect = 0.023
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 31/156 (19%)
Query: 17 EAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPA 76
+A PTQ QGR+ P++G G A AA P Q+Q P A
Sbjct: 521 QAAPPTQGQGRQSR---------PVAGGPG----APPAARPPASPSPQRQA----GPPQA 563
Query: 77 ARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRA--- 133
R V GPA G G+ Q P PPG P + + R
Sbjct: 564 TRQTSVS-------GPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPP 616
Query: 134 ---PPRPAG-APRGSPMAARGRARGEAEPPALGAGA 165
PRP+G P G P + + PP A A
Sbjct: 617 TTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAA 652
Score = 32.0 bits (71), Expect = 0.34
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
Query: 43 GAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPG----PAARTEE 98
G G A+QA PR Q+PRP P PA R + P+L ++KP P A
Sbjct: 596 GPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPK--PQL-AQKPSQDVPPPATAAA 652
Query: 99 GGDVTGRPWQPPLLPPPGVPTP 120
GG P P L P P
Sbjct: 653 GG-----PPHPQLKASPAQAQP 669
Score = 30.8 bits (68), Expect = 0.75
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 55 AHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPP 114
A+ P QRP+P P P G H P PGP T E R
Sbjct: 15 ANLPNGYMTDLQRPQPPPPPP---GAHSP---GATPGPGTATAE------RSSGVAPAAS 62
Query: 115 PGVPTPGNRGG 125
P P+PG+ GG
Sbjct: 63 PAAPSPGSSGG 73
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 45.1 bits (105), Expect = 4e-05
Identities = 51/152 (33%), Positives = 60/152 (39%), Gaps = 22/152 (14%)
Query: 25 QGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPE 84
QG + +V P VP S + + L Q A PR Q P P P ARG PE
Sbjct: 631 QGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGA---PGP----PGARGPIGPE 683
Query: 85 LRSRKPGPAARTEEGGDVTGRPWQPPLLP------PPGVPTPGNRGGE--RRGE-----R 131
R PG + GD+ G P P LL PPGVP P GG GE +
Sbjct: 684 GRDGPPGLQGLRGKKGDM-GPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGK 742
Query: 132 RAPPRPAGAP-RGSPMAARGRARGEAEPPALG 162
PP P G P + P G + EP G
Sbjct: 743 PGPPGPTGPPGKDGPNGPPGPPGTKGEPGERG 774
Score = 29.6 bits (65), Expect = 1.7
Identities = 33/123 (26%), Positives = 39/123 (31%), Gaps = 17/123 (13%)
Query: 68 PRPRSPD--PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGG 125
P P+ P P G+ E R KPGP P +P PG+P P G
Sbjct: 1227 PGPQGPSGLPGIPGEEGKEGRDGKPGP-------------PGEPGKAGEPGLPGPEGARG 1273
Query: 126 ERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAE 185
+ A PRG A G E P G P R PPG
Sbjct: 1274 PPGFKGHTGDSGAPGPRGE-SGAMGLPGQEGLPGKDGDTGPTGPQGPQGPR-GPPGKNGS 1331
Query: 186 RGT 188
G+
Sbjct: 1332 PGS 1334
Score = 27.7 bits (60), Expect = 6.3
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 82 VPELRSRKPGPAARTEEGGDVTGRPWQPPLLP-PPGVPTPGNRGGER--------RGERR 132
+P + K P EG + PP LP PPG+ P GER +G++
Sbjct: 1127 LPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQG 1186
Query: 133 APPRPA--GAP-RGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPG 181
P P G P P A G A G A PP + Q + PPG
Sbjct: 1187 HPGVPGFMGPPGNPGPPGADGIA-GAAGPPGI---------QGSPGKEGPPG 1228
Score = 27.7 bits (60), Expect = 6.3
Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 8/114 (7%)
Query: 75 PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAP 134
P G P+ + G + GD G P P + PPG PG G + P
Sbjct: 1158 PGPPGIAGPQGSQGERGADGEVGQKGD-QGHPGVPGFMGPPG--NPGPPGADGIAGAAGP 1214
Query: 135 PRPAGAP-RGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAERG 187
P G+P + P +G + P G D + P + PG E G
Sbjct: 1215 PGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGE----PGKAGEPG 1264
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 44.7 bits (104), Expect = 5e-05
Identities = 36/118 (30%), Positives = 42/118 (35%), Gaps = 29/118 (24%)
Query: 70 PRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPL---LPPPGVPTPGNRGGE 126
P P P + V + + ++PGP+ E G P PP PPPG P P
Sbjct: 130 PNGPSP----EEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPPG---- 181
Query: 127 RRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGA 184
PP P P G P AA G G P L A P GGGA
Sbjct: 182 ------PPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAA------------QGPGGGGA 221
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 44.7 bits (104), Expect = 5e-05
Identities = 48/158 (30%), Positives = 56/158 (35%), Gaps = 37/158 (23%)
Query: 35 LQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAA 94
L LQVP EG L + +P + +RQ R+P A V +R P
Sbjct: 98 LHLQVP----EGARQLGPRTGAQPSRHRRQ------RAPGLALVVTGVSRIRPAHGAPGL 147
Query: 95 RTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGER----RAPPRPAGAPRGSPMAARG 150
P P P G GGER E R PRP PR P+ A G
Sbjct: 148 ---------------PRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHG 192
Query: 151 RARGEAEPPAL----GAGACDSRNQP----DSQRTAPP 180
A A P L G GA P S+R APP
Sbjct: 193 VASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPP 230
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 44.7 bits (104), Expect = 5e-05
Identities = 42/145 (28%), Positives = 51/145 (35%), Gaps = 21/145 (14%)
Query: 57 RPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPG 116
RP+ Q Q +P P G P R R+PG A + R +PP P PG
Sbjct: 193 RPKSQPPLPQETAAPAPQP---GPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPG 249
Query: 117 V------------PTPGNRGGERRGERRAPPRPAGAPRGS------PMAARGRARGEAEP 158
P PG GGE+ RAP G G+ P AR A G +
Sbjct: 250 ALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGC 309
Query: 159 PALGAGACDSRNQPDSQRTAPPGGG 183
+G D SQ A G G
Sbjct: 310 ATVGLRRGDCDRAGSSQPPATSGNG 334
>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 44.7 bits (104), Expect = 5e-05
Identities = 48/158 (30%), Positives = 56/158 (35%), Gaps = 37/158 (23%)
Query: 35 LQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAA 94
L LQVP EG L + +P + +RQ R+P A V +R P
Sbjct: 219 LHLQVP----EGARQLGPRTGAQPSRHRRQ------RAPGLALVVTGVSRIRPAHGAPGL 268
Query: 95 RTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGER----RAPPRPAGAPRGSPMAARG 150
P P P G GGER E R PRP PR P+ A G
Sbjct: 269 ---------------PRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHG 313
Query: 151 RARGEAEPPAL----GAGACDSRNQP----DSQRTAPP 180
A A P L G GA P S+R APP
Sbjct: 314 VASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPP 351
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 44.7 bits (104), Expect = 5e-05
Identities = 48/158 (30%), Positives = 56/158 (35%), Gaps = 37/158 (23%)
Query: 35 LQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAA 94
L LQVP EG L + +P + +RQ R+P A V +R P
Sbjct: 219 LHLQVP----EGARQLGPRTGAQPSRHRRQ------RAPGLALVVTGVSRIRPAHGAPGL 268
Query: 95 RTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGER----RAPPRPAGAPRGSPMAARG 150
P P P G GGER E R PRP PR P+ A G
Sbjct: 269 ---------------PRAPKPSAGRGGKEGGERGTEMLRRLRGSPRPNRHPRSGPVPAHG 313
Query: 151 RARGEAEPPAL----GAGACDSRNQP----DSQRTAPP 180
A A P L G GA P S+R APP
Sbjct: 314 VASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAPP 351
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 44.3 bits (103), Expect = 7e-05
Identities = 47/157 (29%), Positives = 62/157 (39%), Gaps = 28/157 (17%)
Query: 26 GRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPEL 85
GR E+ ++ L +P+ + +++ Q H Q +R QQ+ +PD
Sbjct: 220 GRGKELKILVLLLLPVQSGQQRQVEQLQHRH---QHERGQQQLVEGAPDGVGHLHG---- 272
Query: 86 RSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPG--NRGGERRGERRAPPRPAGAPRG 143
SR G AA T RP P P +P P +RG R E RAPPRP A R
Sbjct: 273 -SRGSGRAATTT-------RPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARR 324
Query: 144 SPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPP 180
P PPA GA A R + A P
Sbjct: 325 PP-----------PPPAPGAPARPLRGRRSHGPAARP 350
Score = 30.8 bits (68), Expect = 0.75
Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 20/91 (21%)
Query: 51 AAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPP 110
AA + P+ +R + PRP P R P PAAR RP PP
Sbjct: 290 AAASPDLPQPAERSRGEPRPAEPRAPPR-----------PPPAAR---------RPPPPP 329
Query: 111 LLPPPGVPTPGNRGGERRGERRAPPRPAGAP 141
P P G R RA P + AP
Sbjct: 330 APGAPARPLRGRRSHGPAARPRAVPTTSLAP 360
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 44.3 bits (103), Expect = 7e-05
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 28 RDEVIP-VLQLQVP----LSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHV 82
R + +P LQL V L G + ++ Q + +QQQ+QQQ+P+ + P P + Q
Sbjct: 194 RGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQ 253
Query: 83 PEL--RSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRPAGA 140
P L +R GP G +++G P P LP VP PG R PP A
Sbjct: 254 PALVNYNRPSGP------GPELSG-PSTPQKLP---VPAPGGRPSPAPPAAAQPPAAAVP 303
Query: 141 PRGSPMAARGR 151
P A G+
Sbjct: 304 GPSVPQPAPGQ 314
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 44.3 bits (103), Expect = 7e-05
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 28 RDEVIP-VLQLQVP----LSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHV 82
R + +P LQL V L G + ++ Q + +QQQ+QQQ+P+ + P P + Q
Sbjct: 194 RGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQ 253
Query: 83 PEL--RSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRPAGA 140
P L +R GP G +++G P P LP VP PG R PP A
Sbjct: 254 PALVNYNRPSGP------GPELSG-PSTPQKLP---VPAPGGRPSPAPPAAAQPPAAAVP 303
Query: 141 PRGSPMAARGR 151
P A G+
Sbjct: 304 GPSVPQPAPGQ 314
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 44.3 bits (103), Expect = 7e-05
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 26/156 (16%)
Query: 49 LLAAQAAHRPRQQQRQQQRP-----RPRSPDPAARGQHVPELRSRKPG-PAARTEEGGDV 102
LLA +A + Q++ P P+ P P +G + P+ PG P +GG+
Sbjct: 10 LLALSSAQNLNEDVSQEESPSLIAGNPQGPSP--QGGNKPQGPPPPPGKPQGPPPQGGN- 66
Query: 103 TGRPWQPPLLPPPGVPTPGNRGGERRGER-RAPPRPAGAPRGSPMAARGRARGEAEPPA- 160
+P PP PPG P +G +G++ R+P P G P+G P + +G PP
Sbjct: 67 --KPQGPP---PPGKP----QGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK 117
Query: 161 ------LGAGACDSRNQPDSQRTAPPGGGAERGTRT 190
G P + PP G R R+
Sbjct: 118 PQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRS 153
Score = 44.3 bits (103), Expect = 7e-05
Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 61 QQRQQQRPRPRSPDPAARGQHVPELRSRKPG-PAARTEEGGDVTGRPWQPPLLPPPGVPT 119
+ R Q P + P +G + P+ PG P +GG+ +P PP PPG P
Sbjct: 208 KSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN---KPQGPP---PPGKPQ 261
Query: 120 -PGNRGGERRGERRAPP-RPAGAPR-------GSPMAARGRARGEAEPPALGAGACDSRN 170
P +GG + R+PP +P G P+ G P A G + PPA
Sbjct: 262 GPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA---------G 312
Query: 171 QPDSQRTAPPGGGAER 186
QP P GG R
Sbjct: 313 QPQGPPRPPQGGRPSR 328
Score = 43.9 bits (102), Expect = 9e-05
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 58 PRQQQRQQQRPRPRSPD-PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPG 116
P+ ++ Q P P P P +G +S P +GG+ +P PP PPPG
Sbjct: 184 PQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGN---QPQGPP--PPPG 238
Query: 117 VPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQ 175
P P +GG + + PP P G P+G P +++ PP G + Q
Sbjct: 239 KPQGPPPQGGNKP---QGPP-PPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGN-NPQ 293
Query: 176 RTAPPGGG 183
PP GG
Sbjct: 294 GPPPPAGG 301
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/153 (25%), Positives = 57/153 (37%), Gaps = 20/153 (13%)
Query: 58 PRQQQRQQQRPRPRSPD-PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLP--- 113
P+ + Q P P P P +G RS P +GG+ P PP P
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 121
Query: 114 -------PPGVPTPGN-RGGERRGER-RAPPRPAGAPRGSPMAARGRARGEAEPPALGAG 164
P G P PG +G +G++ R+P P G P+G P + +G PP G
Sbjct: 122 PPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 181
Query: 165 ACDSRNQ-------PDSQRTAPPGGGAERGTRT 190
+ P + PP G R +++
Sbjct: 182 PPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQS 214
Score = 28.9 bits (63), Expect = 2.8
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 58 PRQQQRQQQRPRPRSPD--PAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPP 115
P+ + Q P P P PA G RS P ++ G+ P PPP
Sbjct: 245 PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP------PPP 298
Query: 116 GVPTPGNRGGERRGERRAPPRPAGAPRGS 144
P G+ + PPRP R S
Sbjct: 299 AGGNPQQPQAPPAGQPQGPPRPPQGGRPS 327
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 44.3 bits (103), Expect = 7e-05
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 92 PAARTEEGGDVTGRPWQPPLLPPPGVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARG 150
P R +GG+ +P +PP PPPG P P +GG + + PP P G P G P +G
Sbjct: 36 PEGRRPQGGN---QPQRPP--PPPGKPQGPPPQGGN---QSQGPPPPPGKPEGRP--PQG 85
Query: 151 RARGEAEPPALGAGACDSRNQP----DSQRTAPPGGGAER 186
+ + PP G R P SQ T PP G ER
Sbjct: 86 GNQSQGPPPHPGK---PERPPPQGGNQSQGTPPPPGKPER 122
Score = 43.9 bits (102), Expect = 9e-05
Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 30/144 (20%)
Query: 57 RPRQQQRQQQRP-----RPRSPDPA----ARGQHVPELRSRKPGPAARTEEGGDVTGRPW 107
RP Q Q Q P +P P P ++G P + +P P +GG+ + RP
Sbjct: 81 RPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPP-----QGGNQSHRP- 134
Query: 108 QPPLLPPPGVPT-PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGAC 166
PPPG P P +GG + + PP G P G P ++R PP G
Sbjct: 135 ----PPPPGKPERPPPQGGN---QSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPP 187
Query: 167 DSRNQ-------PDSQRTAPPGGG 183
P + PP GG
Sbjct: 188 QQEGNKPQGPPPPGKPQGPPPAGG 211
Score = 34.3 bits (77), Expect = 0.068
Identities = 38/164 (23%), Positives = 55/164 (33%), Gaps = 23/164 (14%)
Query: 19 ERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAAR 78
ERP G + + P P E +HRP + +RP P+ + +
Sbjct: 100 ERPPPQGGNQSQGTPP-----PPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGN---Q 151
Query: 79 GQHVPELRSRKPGPAA----RTEEGGDVTGRPWQPPLLP---PPGVPTPGNRGGERRGER 131
Q P + GP ++ G+P PP P G P PG G
Sbjct: 152 SQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQG------ 205
Query: 132 RAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQ 175
PP G P+ G+ +G PP G ++ Q Q
Sbjct: 206 --PPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQGQQPPQ 247
Score = 33.9 bits (76), Expect = 0.088
Identities = 41/175 (23%), Positives = 60/175 (34%), Gaps = 38/175 (21%)
Query: 40 PLSGAEGKELLAAQAAHRPRQQQRQQQRPRPR-------SPDPAARGQHVP----ELRSR 88
P EG+ + P + +RP P+ +P P + + P R
Sbjct: 74 PPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHR 133
Query: 89 KPGPAARTE----EGGDVTGRPWQPPLLPPPGVPTPGNRGGERR---GERRAPPR----- 136
P P + E +GG+ + P P P P GN+ R G+ + PP+
Sbjct: 134 PPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNK 193
Query: 137 -----PAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAER 186
P G P+G P A G + PPA +P P GG R
Sbjct: 194 PQGPPPPGKPQGPPPAG-GNPQQPQAPPA---------GKPQGPPPPPQGGRPPR 238
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.9 bits (102), Expect = 9e-05
Identities = 40/117 (34%), Positives = 46/117 (39%), Gaps = 12/117 (10%)
Query: 50 LAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQP 109
LAA AAH R P R+ A G HV S P AA G P
Sbjct: 33 LAASAAHHHHLAPRT---PEVRAAAAGALGNHVV---SGSPAGAAGAGPAAPAEGAPGAA 86
Query: 110 PLLPPPGVPTPGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGAC 166
P PP G PG G +R G +P RP +P AA+ R PP AG+C
Sbjct: 87 PEPPPAGRARPGGGGPQRPGP-PSPRRPLVPAGPAPPAAKLR-----PPPEGSAGSC 137
Score = 36.2 bits (82), Expect = 0.018
Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 24/133 (18%)
Query: 73 PDPAARG---QHVPEL-RSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERR 128
P PAA G Q P + + P PAA + P P PPP T
Sbjct: 229 PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLA------- 281
Query: 129 GERRAPPRPAGAPRGSP------MAARGRARGEAEPPALGAG---ACDSRNQPDSQRTAP 179
R P PAG P +P A G + G A PA AG + P + AP
Sbjct: 282 ---RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAP 338
Query: 180 -PGGGAERGTRTV 191
PG AE R V
Sbjct: 339 APGVKAESPKRVV 351
Score = 35.4 bits (80), Expect = 0.030
Identities = 34/127 (26%), Positives = 44/127 (34%), Gaps = 13/127 (10%)
Query: 70 PRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRG 129
P +P PAA P P PA G G P P +PPP + G G
Sbjct: 258 PAAPAPAAPAAAPPP---PPPAPATLARPPGHPAGPPTAAPAVPPPAAA----QNGGSAG 310
Query: 130 ERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRN----QPDSQRTAPPGGGAE 185
AP AG P G ++ + A PA G A + P + +T G A
Sbjct: 311 AAPAPAPAAGGPAG--VSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAS 368
Query: 186 RGTRTVV 192
V+
Sbjct: 369 TAASMVI 375
Score = 29.6 bits (65), Expect = 1.7
Identities = 39/140 (27%), Positives = 44/140 (31%), Gaps = 26/140 (18%)
Query: 40 PLSGAEGKELLAAQA--AHRPRQQQRQQQRPRPRSP----------DPAARGQHVPE--L 85
P + AEG A + A R R QRP P SP PAA+ + PE
Sbjct: 75 PAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSA 134
Query: 86 RSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRPAGAPRGSP 145
S P PAA G P P P G RA P P P P
Sbjct: 135 GSCAPVPAAAAVAAG------------PEPAPAGPAKPAGPAALAARAGPGPGPGPGPGP 182
Query: 146 MAARGRARGEAEPPALGAGA 165
G+ G L A
Sbjct: 183 GPGPGKPAGPGAAQTLNGSA 202
Score = 27.7 bits (60), Expect = 6.3
Identities = 27/100 (27%), Positives = 32/100 (32%), Gaps = 10/100 (10%)
Query: 92 PAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRPAG-APRGSPMAARG 150
PA G P P P + TP G APP PA +P +P A
Sbjct: 213 PAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGA------AAPPAPAAPSPPAAPAPAAP 266
Query: 151 RARGEAEPPA---LGAGACDSRNQPDSQRTAPPGGGAERG 187
A PPA L P + PP A+ G
Sbjct: 267 AAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG 306
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 65 QQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRG 124
+++PRPR P P AR + P L + P PA RP PP PPP P P
Sbjct: 101 RRKPRPR-PQPRARSRSQPGLSAPPPPPA-----------RPPPPPPPPPPPAPRPRAWR 148
Query: 125 GERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALG 162
G RR RP P+ + + G G +P LG
Sbjct: 149 GSRRRS-----RPGSRPQ-TRRSCSGDLDGSGDPGGLG 180
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 2e-04
Identities = 47/147 (31%), Positives = 56/147 (38%), Gaps = 19/147 (12%)
Query: 57 RPRQQQRQQQR---PRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLP 113
RP+ Q Q P P+ P P A P SR+ GP R E G +P PL
Sbjct: 193 RPKSQPPLPQETAAPAPQ-PGPTAPPARPPAYESRE-GPRGRAESRGSGPAQPAHLPLPG 250
Query: 114 P---PGVPTPGNRGGERRGE---RRAPPRPAGAPRGSPMAARGRARGE------AEPPAL 161
P P P P R G G RR PR A S A G RG+ ++PPA
Sbjct: 251 PAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPAT 310
Query: 162 GAGACDSRNQPDSQRTAPPGGGAERGT 188
R + +R GGG GT
Sbjct: 311 SGNG--ERCRFCRRRRRRGGGGEGEGT 335
Score = 34.3 bits (77), Expect = 0.068
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 23/141 (16%)
Query: 67 RPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVT-------------GRPWQPPLLP 113
R P P P G H P R + GP+A T + G T + P P
Sbjct: 102 RATPPLPHP---GDHHPRHRKNR-GPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRP 157
Query: 114 PPGVPTPGNRGGERR-----GERRAPPRPAGAPRGSPMAARGRARGEAEP-PALGAGACD 167
PP + G R +R G + PPR G+ G P + + A P P G A
Sbjct: 158 PPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPP 217
Query: 168 SRNQPDSQRTAPPGGGAERGT 188
+R R P G RG+
Sbjct: 218 ARPPAYESREGPRGRAESRGS 238
Score = 33.5 bits (75), Expect = 0.12
Identities = 40/138 (28%), Positives = 45/138 (32%), Gaps = 29/138 (21%)
Query: 58 PRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGV 117
PRQ+ RP+ + P P P+ PGP A PP PP
Sbjct: 184 PRQEGSFGGRPKSQPPLPQETAAPAPQ-----PGPTA--------------PPARPPAYE 224
Query: 118 PTPGNRG-GERRGERRAPPRPAGAPRGSPMAARGRARGEAEP-PALGAGACDSRNQPDSQ 175
G RG E RG P +PA P P A A P P L G
Sbjct: 225 SREGPRGRAESRGS--GPAQPAHLPLPGP------AHSPAPPAPELREGRAPGSTAGRRP 276
Query: 176 RTAPPGGGAERGTRTVVL 193
R P E G TV L
Sbjct: 277 RPREPQAAEESGCATVGL 294
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 42.7 bits (99), Expect = 2e-04
Identities = 51/160 (31%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 18 AERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQR-------PRP 70
A P LQ R P +L PL+G+ L + PR+ +R+ +R P P
Sbjct: 275 ARSPPPLQPRLGSASPP-RLAAPLAGSRAPSL-----SPFPRRCRRRAERSPAGHGLPLP 328
Query: 71 RSPDPAARGQHVPELRSRKPGPAARTE--EGGDVTGRPWQPPLLPPPGVPTPGNRGGERR 128
RS +RG V R R+ G R G G P P P P R GERR
Sbjct: 329 RS---LSRGGEVVGARRRRGGEERRVRGRRQGCALGSP------PIPAGPAAPGRAGERR 379
Query: 129 GERRAPPRPAGAPRGSPM-AARGR-ARGEAEPPALGAGAC 166
R+ R G P SP A+G RG P A G+ C
Sbjct: 380 AARQWRKR-GGGPGVSPREGAQGEGVRGGVTPRARGSSTC 418
Score = 31.6 bits (70), Expect = 0.44
Identities = 47/159 (29%), Positives = 55/159 (34%), Gaps = 19/159 (11%)
Query: 47 KELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQ-HVPELRSRKPGPAARTEEGGDVTGR 105
K A + A R R++ R R + PAARG P L A +
Sbjct: 220 KPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPP 279
Query: 106 PWQPPL--LPPP--GVPTPGNRGGE-----RRGERRAPPRPAG----APR-----GSPMA 147
P QP L PP P G+R RR RRA PAG PR G +
Sbjct: 280 PLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVG 339
Query: 148 ARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAER 186
AR R GE C + P A PG ER
Sbjct: 340 ARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGER 378
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 2e-04
Identities = 47/147 (31%), Positives = 56/147 (38%), Gaps = 19/147 (12%)
Query: 57 RPRQQQRQQQR---PRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLP 113
RP+ Q Q P P+ P P A P SR+ GP R E G +P PL
Sbjct: 193 RPKSQPPLPQETAAPAPQ-PGPTAPPARPPAYESRE-GPRGRAESRGSGPAQPAHLPLPG 250
Query: 114 P---PGVPTPGNRGGERRGE---RRAPPRPAGAPRGSPMAARGRARGE------AEPPAL 161
P P P P R G G RR PR A S A G RG+ ++PPA
Sbjct: 251 PAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPAT 310
Query: 162 GAGACDSRNQPDSQRTAPPGGGAERGT 188
R + +R GGG GT
Sbjct: 311 SGNG--ERCRFCRRRRRRGGGGEGEGT 335
Score = 34.3 bits (77), Expect = 0.068
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 23/141 (16%)
Query: 67 RPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVT-------------GRPWQPPLLP 113
R P P P G H P R + GP+A T + G T + P P
Sbjct: 102 RATPPLPHP---GDHHPRHRKNR-GPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRP 157
Query: 114 PPGVPTPGNRGGERR-----GERRAPPRPAGAPRGSPMAARGRARGEAEP-PALGAGACD 167
PP + G R +R G + PPR G+ G P + + A P P G A
Sbjct: 158 PPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPP 217
Query: 168 SRNQPDSQRTAPPGGGAERGT 188
+R R P G RG+
Sbjct: 218 ARPPAYESREGPRGRAESRGS 238
Score = 33.5 bits (75), Expect = 0.12
Identities = 40/138 (28%), Positives = 45/138 (32%), Gaps = 29/138 (21%)
Query: 58 PRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGV 117
PRQ+ RP+ + P P P+ PGP A PP PP
Sbjct: 184 PRQEGSFGGRPKSQPPLPQETAAPAPQ-----PGPTA--------------PPARPPAYE 224
Query: 118 PTPGNRG-GERRGERRAPPRPAGAPRGSPMAARGRARGEAEP-PALGAGACDSRNQPDSQ 175
G RG E RG P +PA P P A A P P L G
Sbjct: 225 SREGPRGRAESRGS--GPAQPAHLPLPGP------AHSPAPPAPELREGRAPGSTAGRRP 276
Query: 176 RTAPPGGGAERGTRTVVL 193
R P E G TV L
Sbjct: 277 RPREPQAAEESGCATVGL 294
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 42.7 bits (99), Expect = 2e-04
Identities = 51/160 (31%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 18 AERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQR-------PRP 70
A P LQ R P +L PL+G+ L + PR+ +R+ +R P P
Sbjct: 275 ARSPPPLQPRLGSASPP-RLAAPLAGSRAPSL-----SPFPRRCRRRAERSPAGHGLPLP 328
Query: 71 RSPDPAARGQHVPELRSRKPGPAARTE--EGGDVTGRPWQPPLLPPPGVPTPGNRGGERR 128
RS +RG V R R+ G R G G P P P P R GERR
Sbjct: 329 RS---LSRGGEVVGARRRRGGEERRVRGRRQGCALGSP------PIPAGPAAPGRAGERR 379
Query: 129 GERRAPPRPAGAPRGSPM-AARGR-ARGEAEPPALGAGAC 166
R+ R G P SP A+G RG P A G+ C
Sbjct: 380 AARQWRKR-GGGPGVSPREGAQGEGVRGGVTPRARGSSTC 418
Score = 31.6 bits (70), Expect = 0.44
Identities = 47/159 (29%), Positives = 55/159 (34%), Gaps = 19/159 (11%)
Query: 47 KELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQ-HVPELRSRKPGPAARTEEGGDVTGR 105
K A + A R R++ R R + PAARG P L A +
Sbjct: 220 KPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPP 279
Query: 106 PWQPPL--LPPP--GVPTPGNRGGE-----RRGERRAPPRPAG----APR-----GSPMA 147
P QP L PP P G+R RR RRA PAG PR G +
Sbjct: 280 PLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVG 339
Query: 148 ARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGGAER 186
AR R GE C + P A PG ER
Sbjct: 340 ARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGER 378
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 2e-04
Identities = 47/147 (31%), Positives = 56/147 (38%), Gaps = 19/147 (12%)
Query: 57 RPRQQQRQQQR---PRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLP 113
RP+ Q Q P P+ P P A P SR+ GP R E G +P PL
Sbjct: 193 RPKSQPPLPQETAAPAPQ-PGPTAPPARPPAYESRE-GPRGRAESRGSGPAQPAHLPLPG 250
Query: 114 P---PGVPTPGNRGGERRGE---RRAPPRPAGAPRGSPMAARGRARGE------AEPPAL 161
P P P P R G G RR PR A S A G RG+ ++PPA
Sbjct: 251 PAHSPAPPAPELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPAT 310
Query: 162 GAGACDSRNQPDSQRTAPPGGGAERGT 188
R + +R GGG GT
Sbjct: 311 SGNG--ERCRFCRRRRRRGGGGEGEGT 335
Score = 34.3 bits (77), Expect = 0.068
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 23/141 (16%)
Query: 67 RPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVT-------------GRPWQPPLLP 113
R P P P G H P R + GP+A T + G T + P P
Sbjct: 102 RATPPLPHP---GDHHPRHRKNR-GPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRP 157
Query: 114 PPGVPTPGNRGGERR-----GERRAPPRPAGAPRGSPMAARGRARGEAEP-PALGAGACD 167
PP + G R +R G + PPR G+ G P + + A P P G A
Sbjct: 158 PPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPP 217
Query: 168 SRNQPDSQRTAPPGGGAERGT 188
+R R P G RG+
Sbjct: 218 ARPPAYESREGPRGRAESRGS 238
Score = 33.5 bits (75), Expect = 0.12
Identities = 40/138 (28%), Positives = 45/138 (32%), Gaps = 29/138 (21%)
Query: 58 PRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGV 117
PRQ+ RP+ + P P P+ PGP A PP PP
Sbjct: 184 PRQEGSFGGRPKSQPPLPQETAAPAPQ-----PGPTA--------------PPARPPAYE 224
Query: 118 PTPGNRG-GERRGERRAPPRPAGAPRGSPMAARGRARGEAEP-PALGAGACDSRNQPDSQ 175
G RG E RG P +PA P P A A P P L G
Sbjct: 225 SREGPRGRAESRGS--GPAQPAHLPLPGP------AHSPAPPAPELREGRAPGSTAGRRP 276
Query: 176 RTAPPGGGAERGTRTVVL 193
R P E G TV L
Sbjct: 277 RPREPQAAEESGCATVGL 294
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 42.4 bits (98), Expect = 2e-04
Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 25/184 (13%)
Query: 26 GRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPEL 85
G R E LQLQ +G G+ + + +Q+ + ++ +P P +RG +
Sbjct: 99 GHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKR 158
Query: 86 RSRKP------GPAARTEEGGDVTG--RPWQPPLLPPPGVPTPGNRGGERRGERRAPP-- 135
+ ++P G R G + + Q P P +RG R E+R P
Sbjct: 159 KRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRG--HRTEKRKPQQP 216
Query: 136 --RPAG------APRGSPMAARGRARGEAE-----PPALGAGACDSRNQPDSQRTAPPGG 182
RPAG R SP A + RA+ E P G + +P + P GG
Sbjct: 217 QCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGG 276
Query: 183 GAER 186
+R
Sbjct: 277 TGQR 280
Score = 35.8 bits (81), Expect = 0.023
Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 14/167 (8%)
Query: 25 QGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPE 84
+G R E Q Q +G G+ + + +Q + ++ +P P +RG +
Sbjct: 151 RGHRTEKRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEK 210
Query: 85 LRSRKP--GPAARTEEGGDVTGRP------WQPPLLPPPGVPTPGNRGGERRGERRAPPR 136
+ ++P PA T + P Q P P +RG R E+R P +
Sbjct: 211 RKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRG--HRTEKRKPQQ 268
Query: 137 PAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTAPPGGG 183
P P G G+ RG P+ R + + AP G
Sbjct: 269 PQRRPAG----GTGQRRGSGYSPSADQQGAQDREEEAAAAPAPTSSG 311
Score = 35.4 bits (80), Expect = 0.030
Identities = 44/171 (25%), Positives = 64/171 (37%), Gaps = 24/171 (14%)
Query: 43 GAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSR---KPGPAARTEEG 99
GA+ +E AA A +Q+ + ++ +P P + G H E R R + PA T +
Sbjct: 63 GAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSG-HRTEKRKRLQLQCQPAGGTGQR 121
Query: 100 GDVTGRP------WQPPLLPPPGVPTPGNRGGERRGERRAPP--RPAG----------AP 141
P Q P P +RG +R P RPAG +P
Sbjct: 122 RGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQRRPAGGTGQRRGSGSSP 181
Query: 142 RGSPMAARGRARGEAEPPA-LGAGACDSRNQPDSQRTAPPGG-GAERGTRT 190
A+ R A PA G + +P + P GG G RG+R+
Sbjct: 182 SADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGTGQRRGSRS 232
Score = 33.5 bits (75), Expect = 0.12
Identities = 38/163 (23%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 18 AERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAA 77
A PT +G R E Q Q +G G+ + + +Q+ + ++ +P P +
Sbjct: 198 APAPTS-RGHRTEKRKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTS 256
Query: 78 RGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGERRAPPRP 137
RG RKP R GG R G ++ G + E A P
Sbjct: 257 RGHRT---EKRKPQQPQRRPAGGTGQRR--------GSGYSPSADQQGAQDREEEAAAAP 305
Query: 138 AGAPRGSPMAARGRARGEAEPPA-----LGAGACDSRNQPDSQ 175
A G R R + + +P G+G S NQ +Q
Sbjct: 306 APTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQ 348
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 42.4 bits (98), Expect = 2e-04
Identities = 50/158 (31%), Positives = 64/158 (40%), Gaps = 27/158 (17%)
Query: 20 RPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQR-------PRPRS 72
+P LQ R P +L PL+G+ L + PR+ +R+ +R P PRS
Sbjct: 183 KPPPLQPRLGSASPP-RLAAPLAGSRAPSL-----SPFPRRCRRRAERSPAGHGLPLPRS 236
Query: 73 PDPAARGQHVPELRSRKPGPAARTE--EGGDVTGRPWQPPLLPPPGVPTPGNRGGERRGE 130
+RG V R R+ G R G G P P P P R GERR
Sbjct: 237 ---LSRGGEVVGARRRRGGEERRVRGRRQGCALGSP------PIPAGPAAPGRAGERRAA 287
Query: 131 RRAPPRPAGAPRGSPM-AARGR-ARGEAEPPALGAGAC 166
R+ R G P SP A+G RG P A G+ C
Sbjct: 288 RQWRKR-GGGPGVSPREGAQGEGVRGGVTPRARGSSTC 324
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 42.4 bits (98), Expect = 2e-04
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 26/161 (16%)
Query: 49 LLAAQAAHRPRQQQRQQQRPRPRSPDPAAR---GQHVPELRSRKPG-PAARTEEGGDVTG 104
LLA +A + Q++ P S P R G + P+ PG P R +GG+ +
Sbjct: 10 LLALSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQ 69
Query: 105 ----RPWQPPLLPPPG-------VPTPGNRGGERR---GERRAPPRPAGAPRGSPMAARG 150
RP +P PP G P PG G+ + + PP G P G P
Sbjct: 70 GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGN 129
Query: 151 RARG--------EAEPPALGAGACDSRNQPDSQRTAPPGGG 183
+++G E PP G + +P PP GG
Sbjct: 130 QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGG 170
Score = 40.8 bits (94), Expect = 7e-04
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 26/153 (16%)
Query: 57 RPRQQQRQQQRPRPR--SPD-PAARGQHVPELRSRKPG-PAARTEEGGDVTG----RPWQ 108
RP Q Q Q P PR P+ P +G + + +PG P + +GG+ + RP +
Sbjct: 60 RPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGK 119
Query: 109 PPLLPPPG-------VPTPGNRGG---ERRGERRAPPRPAGAPRGSPMAARGRARG---- 154
P PP G P PG G + + + PP G P G P +++G
Sbjct: 120 PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPH 179
Query: 155 ----EAEPPALGAGACDSRNQPDSQRTAPPGGG 183
E PP G + +P PP GG
Sbjct: 180 PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGG 212
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Query: 62 QRQQQRPRPRSPD-PAARGQHVPELRSRKPG-PAARTEEGGDVTGRPWQPPLLPPPGVPT 119
Q Q PRP P+ P +G + + +PG P +GG+ +P PP P PG P
Sbjct: 193 QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGN---KPQGPP--PHPGKPQ 247
Query: 120 --PGNRGGERR-----GERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQP 172
P G + + G + PP P G P+ G+ +G PP G + QP
Sbjct: 248 GPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQP 307
Score = 37.0 bits (84), Expect = 0.010
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Query: 62 QRQQQRPRPRSPD-PAARGQHVPELRSRKPG-PAARTEEGGDVTGRPWQPPLLPPPGVPT 119
Q Q PRP P+ P +G + + +PG P +GG+ + P P PG P
Sbjct: 130 QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP-----PPHPGKPE 184
Query: 120 -PGNRGGERRGERRAPPRPAGAPRGSPMAARGRARGEAEPPALGAGACDSRNQPDSQRTA 178
P +GG + + PPRP G P G P +G + + PP G + +
Sbjct: 185 GPPPQGGNQ--SQGPPPRP-GKPEGPP--PQGGNQSQGPPPRPGKPEGPPSQGGNKPQGP 239
Query: 179 PPGGGAERG 187
PP G +G
Sbjct: 240 PPHPGKPQG 248
Score = 33.5 bits (75), Expect = 0.12
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 62 QRQQQRPRPRSPD-PAARGQHVPELRSRKPG-PAARTEEGGDVTGRPWQPPLLPPPGVPT 119
Q Q PRP P+ P +G + + +PG P +GG+ + P PP P P
Sbjct: 109 QSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP--PPRPGKPEGPP 166
Query: 120 PGNRGGERRGERRAPPRPAGAPRGSPMAARG----RARGEAEPPALGAGACDSRNQPDSQ 175
P G + +G P +P G P ++G + E PP G + +P
Sbjct: 167 PQG-GNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKP 225
Query: 176 RTAPPGGG 183
P GG
Sbjct: 226 EGPPSQGG 233
Score = 30.4 bits (67), Expect = 0.98
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 25/98 (25%)
Query: 62 QRQQQRPRPRSPD-PAARGQHVPE-----------------LRSRKPGPAARTEEGGDVT 103
Q Q PRP P+ P ++G + P+ + ++P P R +
Sbjct: 214 QSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPG 273
Query: 104 GRPWQPPLLPPP-----GVPTPGNRGGERRGERRAPPR 136
G P QP LPPP G P P G R + PP+
Sbjct: 274 GNPQQP--LPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,277,437
Number of Sequences: 37866
Number of extensions: 856671
Number of successful extensions: 9223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 1318
Number of HSP's that attempted gapping in prelim test: 5849
Number of HSP's gapped (non-prelim): 3764
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.