Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239747106
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747106 PREDICTED: similar to HDCMB45P [Homo sapiens]
(178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747106 PREDICTED: similar to HDCMB45P [Homo sapiens] 357 2e-99
gi|22209001 hypothetical protein LOC200765 [Homo sapiens] 206 7e-54
gi|62899065 centrosomal protein 72 kDa [Homo sapiens] 31 0.64
gi|224586773 hypothetical protein LOC643854 [Homo sapiens] 29 2.4
gi|4507255 signal transducer and activator of transcription 4 [H... 29 2.4
gi|122937345 myosin VB [Homo sapiens] 28 3.2
gi|95147333 phospholipase C, beta 2 [Homo sapiens] 28 4.1
gi|13699824 kinesin family member 11 [Homo sapiens] 28 4.1
gi|6754472 kinesin family member 23 isoform 2 [Homo sapiens] 28 4.1
gi|20143967 kinesin family member 23 isoform 1 [Homo sapiens] 28 4.1
gi|146262005 CTAGE family, member 6 [Homo sapiens] 28 4.1
gi|56847634 hypothetical protein LOC441294 [Homo sapiens] 28 4.1
gi|193290160 CTAGE family, member 4 [Homo sapiens] 28 5.4
gi|114431246 keratin 25D [Homo sapiens] 28 5.4
gi|4885549 AKT3 kinase isoform 1 [Homo sapiens] 28 5.4
gi|32307163 AKT3 kinase isoform 2 [Homo sapiens] 28 5.4
gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens] 28 5.4
gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens] 28 5.4
gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens] 28 5.4
gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens] 28 5.4
gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens] 28 5.4
gi|30794504 zinc finger protein 354C [Homo sapiens] 28 5.4
gi|224451082 cytospin A [Homo sapiens] 27 7.1
gi|224451080 cytospin A [Homo sapiens] 27 7.1
gi|118498356 kinectin 1 isoform a [Homo sapiens] 27 7.1
gi|118498368 kinectin 1 isoform c [Homo sapiens] 27 7.1
gi|33620775 kinectin 1 isoform a [Homo sapiens] 27 7.1
gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform... 27 7.1
gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform... 27 7.1
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 27 9.2
>gi|239747106 PREDICTED: similar to HDCMB45P [Homo sapiens]
Length = 178
Score = 357 bits (917), Expect = 2e-99
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MIPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDG 60
MIPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDG
Sbjct: 1 MIPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDG 60
Query: 61 KRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHTVSKMLSNSI 120
KRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHTVSKMLSNSI
Sbjct: 61 KRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHTVSKMLSNSI 120
Query: 121 MCYRDIFYERESQLMQQTSLLSYEIAIATPTFSNYYPDWSAPINIVARPSTSKKITTC 178
MCYRDIFYERESQLMQQTSLLSYEIAIATPTFSNYYPDWSAPINIVARPSTSKKITTC
Sbjct: 121 MCYRDIFYERESQLMQQTSLLSYEIAIATPTFSNYYPDWSAPINIVARPSTSKKITTC 178
>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
Length = 591
Score = 206 bits (525), Expect = 7e-54
Identities = 109/177 (61%), Positives = 138/177 (77%), Gaps = 9/177 (5%)
Query: 1 MIPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDG 60
+IP L DD+EGF+TS+EE++AD+VE +ELELE E EDVT+ LQSH KTLT+E+LFLMD
Sbjct: 406 LIPTLIDDYEGFKTSVEEVSADVVEIAKELELEVEPEDVTELLQSHDKTLTDEELFLMDA 465
Query: 61 KRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDK--AGFERTDSNFERSHTVSKMLSN 118
+R WFLEMESTPGEDA+N V+MTTKDL+Y +L+DK AGFER DSNFERS TV KMLSN
Sbjct: 466 QRKWFLEMESTPGEDAVNIVEMTTKDLEYYINLVDKAAAGFERIDSNFERSSTVGKMLSN 525
Query: 119 SIMCYRDIFYERESQLMQQTSLLSYEIAIATPTFSNYYPDWSAPINIVA-RPSTSKK 174
SI CYR+IF+ER+SQLM++ S +SY + P P SA + + +PSTS++
Sbjct: 526 SIACYREIFHERKSQLMRKASPMSYFRKLPQP------PQPSAATTLTSQQPSTSRQ 576
>gi|62899065 centrosomal protein 72 kDa [Homo sapiens]
Length = 647
Score = 30.8 bits (68), Expect = 0.64
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 11 GFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTL--TNEKL 55
G QTS++ + ++VE + LE + +++TQ LQ +L TNE L
Sbjct: 556 GLQTSVKRLCGEIVELKQHLEHYDKIQELTQMLQESHSSLVSTNEHL 602
>gi|224586773 hypothetical protein LOC643854 [Homo sapiens]
Length = 777
Score = 28.9 bits (63), Expect = 2.4
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 24 VETVREL--ELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRTWFL------EMESTPGED 75
+ET R+L +LE E E F Q K+ ++ EK G W + E+
Sbjct: 430 LETYRKLAKDLEEELERTVHFYQ--KQVISYEKR----GHDNWLAARTAERNLSDLRKEN 483
Query: 76 AMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHT 111
A N K+T ++LK++ D + +++ F R H+
Sbjct: 484 AHNKQKLTERELKFELLEKDPNALDVSNTAFGREHS 519
>gi|4507255 signal transducer and activator of transcription 4 [Homo
sapiens]
Length = 748
Score = 28.9 bits (63), Expect = 2.4
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 78 NTVKMTTKDLKYDRSLIDKAGFE-RTDSNFERSHTVSKMLSNSIMCYRDIF----YERES 132
N+V+MT +D KY L D+ + +T ++S S M++ ++ +++ ++R+
Sbjct: 152 NSVQMTEQDTKYLEDLQDEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKE 211
Query: 133 QLMQQTSLLSYEIAIATPTFSNYYPDW 159
L + T ++ + DW
Sbjct: 212 ALSKMTQIIHETDLLMNTMLIEELQDW 238
>gi|122937345 myosin VB [Homo sapiens]
Length = 1848
Score = 28.5 bits (62), Expect = 3.2
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 8 DFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKT-----------LTNEKLF 56
++ TS T D ++ V E+ LE + D+T FL+ K+ + EK
Sbjct: 1112 NYPSISTSEIGDTEDALQQVEEIGLEKAAMDMTVFLKLQKRVRELEQERKKLQVQLEKRE 1171
Query: 57 LMDGKRTWF----LEMESTPGED-AMNTVK-----MTTKDLKYDRSLIDKAGFERTDSNF 106
D K+ +++ P D A N++K K LK D + + KA ++ N
Sbjct: 1172 QQDSKKVQAEPPQTDIDLDPNADLAYNSLKRQELESENKKLKNDLNELRKAVADQATQN- 1230
Query: 107 ERSH----TVSKMLSNSIMCYRDIFYERESQLMQQTSLLS 142
SH + S +L+ + + ++ +E L+ +T ++S
Sbjct: 1231 NSSHGSPDSYSLLLNQLKLAHEELEVRKEEVLILRTQIVS 1270
>gi|95147333 phospholipase C, beta 2 [Homo sapiens]
Length = 1185
Score = 28.1 bits (61), Expect = 4.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 1 MIPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQF 42
+I +T++ E Q +EE A +E +RE+E + + E + ++
Sbjct: 1086 VIKQMTENLERHQEKLEEKQAACLEQIREMEKQFQKEALAEY 1127
>gi|13699824 kinesin family member 11 [Homo sapiens]
Length = 1056
Score = 28.1 bits (61), Expect = 4.1
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 2 IPALTDDFEGFQTSMEEITADMVETVRELE-LEGESEDVTQFLQSHKKTLTNEKLFLMDG 60
I L + + + +T ++ EL+ + + ++ TQ L++ +K L KL L+
Sbjct: 419 IVELIEKIGAVEEELNRVTELFMDNKNELDQCKSDLQNKTQELETTQKHLQETKLQLVKE 478
Query: 61 KR-TWFLEMESTPGEDA----MNTVKMTTKDLKYDRSLIDK 96
+ T LE DA +NTV+ TTKD+ S +D+
Sbjct: 479 EYITSALESTEEKLHDAASKLLNTVEETTKDVSGLHSKLDR 519
>gi|6754472 kinesin family member 23 isoform 2 [Homo sapiens]
Length = 856
Score = 28.1 bits (61), Expect = 4.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 92 SLIDKAGFERTDSNFERSHTVSKM--LSNSIMCYRDIF-YERESQLMQQTSLLSYEIAIA 148
SL+D AG ERT+ + + + ++ S+M R RE+Q+ ++ Y +
Sbjct: 334 SLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRTCMDVLRENQMYGTNKMVPYRDSKL 393
Query: 149 TPTFSNYY 156
T F NY+
Sbjct: 394 THLFKNYF 401
>gi|20143967 kinesin family member 23 isoform 1 [Homo sapiens]
Length = 960
Score = 28.1 bits (61), Expect = 4.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 92 SLIDKAGFERTDSNFERSHTVSKM--LSNSIMCYRDIF-YERESQLMQQTSLLSYEIAIA 148
SL+D AG ERT+ + + + ++ S+M R RE+Q+ ++ Y +
Sbjct: 334 SLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRTCMDVLRENQMYGTNKMVPYRDSKL 393
Query: 149 TPTFSNYY 156
T F NY+
Sbjct: 394 THLFKNYF 401
>gi|146262005 CTAGE family, member 6 [Homo sapiens]
Length = 777
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 22 DMVETVREL--ELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRTWFL------EMESTPG 73
+ +ET R+L +LE E E F Q K+ ++ EK G W +
Sbjct: 428 EQLETYRKLAKDLEEELERTVHFYQ--KQVISYEKR----GHDNWLAARTAERNLSDLRK 481
Query: 74 EDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSH 110
E+A N K+T +LK++ D + +++ F R H
Sbjct: 482 ENAHNKQKLTETELKFELLEKDPNALDVSNTAFGREH 518
>gi|56847634 hypothetical protein LOC441294 [Homo sapiens]
Length = 777
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 22 DMVETVREL--ELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRTWFL------EMESTPG 73
+ +ET R+L +LE E E F Q K+ ++ EK G W +
Sbjct: 428 EQLETYRKLAKDLEEELERTVHFYQ--KQVISYEKR----GHDNWLAARTAERNLSDLRK 481
Query: 74 EDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSH 110
E+A N K+T +LK++ D + +++ F R H
Sbjct: 482 ENAHNKQKLTETELKFELLEKDPNALDVSNTAFGREH 518
>gi|193290160 CTAGE family, member 4 [Homo sapiens]
Length = 777
Score = 27.7 bits (60), Expect = 5.4
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Query: 24 VETVREL--ELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRTWFL------EMESTPGED 75
+ET R+L +LE E E F Q K+ ++ EK G W + E+
Sbjct: 430 LETYRKLAKDLEEELERTVHFYQ--KQVISYEKR----GHDNWLAARTAERNLSDLRKEN 483
Query: 76 AMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHT 111
A N K+T +LK++ D + +++ F R H+
Sbjct: 484 AHNKQKLTETELKFELLEKDPNALDVSNTAFGREHS 519
>gi|114431246 keratin 25D [Homo sapiens]
Length = 464
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 8 DFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRTWFLE 67
D G + ++E+T + T +EL+ E SE++T ++H++ + K +E
Sbjct: 192 DINGLRRVLDELT--LCRTDQELQYESLSEEMTYLKKNHEEEM---KALQCAAGGNVNVE 246
Query: 68 MESTPGED 75
M + PG D
Sbjct: 247 MNAAPGVD 254
>gi|4885549 AKT3 kinase isoform 1 [Homo sapiens]
Length = 479
Score = 27.7 bits (60), Expect = 5.4
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 50 LTNEKLFLMDGKRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAG 98
L+ E++F D RT F E D +++ K+ +DLK + ++DK G
Sbjct: 237 LSRERVFSED--RTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG 283
>gi|32307163 AKT3 kinase isoform 2 [Homo sapiens]
Length = 465
Score = 27.7 bits (60), Expect = 5.4
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 50 LTNEKLFLMDGKRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAG 98
L+ E++F D RT F E D +++ K+ +DLK + ++DK G
Sbjct: 237 LSRERVFSED--RTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG 283
>gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]
Length = 1464
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 41 QFLQSHKKTLTNEKLFLMDGKRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFE 100
Q L+ +KT EKL R F++ +++ K + Y++S+I F
Sbjct: 546 QSLKRRQKTYNKEKLCDFTDGRDAFMQSSELSEHQKIHSRKNLFEGRGYEKSVIHSGPFT 605
Query: 101 RTDSNFERSHTVSKMLSN 118
+ ++SHT+++ L +
Sbjct: 606 ES----QKSHTITRPLES 619
>gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 41 QFLQSHKKTLTNEKLFLMDGKRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFE 100
Q L+ +KT EKL R F++ +++ K + Y++S+I F
Sbjct: 670 QSLKRRQKTYNKEKLCDFTDGRDAFMQSSELSEHQKIHSRKNLFEGRGYEKSVIHSGPFT 729
Query: 101 RTDSNFERSHTVSKMLSN 118
+ ++SHT+++ L +
Sbjct: 730 ES----QKSHTITRPLES 743
>gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens]
Length = 1462
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 41 QFLQSHKKTLTNEKLFLMDGKRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFE 100
Q L+ +KT EKL R F++ +++ K + Y++S+I F
Sbjct: 544 QSLKRRQKTYNKEKLCDFTDGRDAFMQSSELSEHQKIHSRKNLFEGRGYEKSVIHSGPFT 603
Query: 101 RTDSNFERSHTVSKMLSN 118
+ ++SHT+++ L +
Sbjct: 604 ES----QKSHTITRPLES 617
>gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 41 QFLQSHKKTLTNEKLFLMDGKRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFE 100
Q L+ +KT EKL R F++ +++ K + Y++S+I F
Sbjct: 670 QSLKRRQKTYNKEKLCDFTDGRDAFMQSSELSEHQKIHSRKNLFEGRGYEKSVIHSGPFT 729
Query: 101 RTDSNFERSHTVSKMLSN 118
+ ++SHT+++ L +
Sbjct: 730 ES----QKSHTITRPLES 743
>gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 41 QFLQSHKKTLTNEKLFLMDGKRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDKAGFE 100
Q L+ +KT EKL R F++ +++ K + Y++S+I F
Sbjct: 670 QSLKRRQKTYNKEKLCDFTDGRDAFMQSSELSEHQKIHSRKNLFEGRGYEKSVIHSGPFT 729
Query: 101 RTDSNFERSHTVSKMLSN 118
+ ++SHT+++ L +
Sbjct: 730 ES----QKSHTITRPLES 743
>gi|30794504 zinc finger protein 354C [Homo sapiens]
Length = 554
Score = 27.7 bits (60), Expect = 5.4
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 22 DMVETVRELELEGESEDVTQFLQSHKKTLTNE--KLFLMDGK----RTWFLEMESTPGED 75
+ VE E+E E E + + Q + SH+KT++ + L GK T + +S P E
Sbjct: 126 EAVEFESEIEEEQEKKPLRQMIDSHEKTISEDGNHTSLELGKSLFTNTALVTQQSVPIER 185
Query: 76 AMNTVKMTTKDLKYDRSLI 94
N KD K + L+
Sbjct: 186 IPNMYYTFGKDFKQNFDLM 204
>gi|224451082 cytospin A [Homo sapiens]
Length = 1117
Score = 27.3 bits (59), Expect = 7.1
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 2 IPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGK 61
+ LT+ + + + ++ T++EL + + +TQ L S + L EK+ LM+
Sbjct: 393 VACLTERIHQMEENQHSTSEELQATLQEL---ADLQQITQELNSENERLGEEKVILMES- 448
Query: 62 RTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDK 96
L +S + ++ ++ ++Y RSL+D+
Sbjct: 449 ----LCQQS-------DKLEHFSRQIEYFRSLLDE 472
>gi|224451080 cytospin A [Homo sapiens]
Length = 1117
Score = 27.3 bits (59), Expect = 7.1
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 2 IPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGK 61
+ LT+ + + + ++ T++EL + + +TQ L S + L EK+ LM+
Sbjct: 393 VACLTERIHQMEENQHSTSEELQATLQEL---ADLQQITQELNSENERLGEEKVILMES- 448
Query: 62 RTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDK 96
L +S + ++ ++ ++Y RSL+D+
Sbjct: 449 ----LCQQS-------DKLEHFSRQIEYFRSLLDE 472
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 27.3 bits (59), Expect = 7.1
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 17 EEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRT------WFLEMES 70
EEI +E ++L + + +++ L+ ++ + K L + ++ W +++
Sbjct: 843 EEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQE 902
Query: 71 TPGEDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHTVSKMLSNSIMCYRDIFYER 130
+ ++ +LK S S FE V K N + + ER
Sbjct: 903 ENESLKAHVQEVAQHNLKEASSA----------SQFEELEIVLKEKENELKRLEAMLKER 952
Query: 131 ESQLMQQTSLL 141
ES L +T LL
Sbjct: 953 ESDLSSKTQLL 963
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 27.3 bits (59), Expect = 7.1
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 17 EEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRT------WFLEMES 70
EEI +E ++L + + +++ L+ ++ + K L + ++ W +++
Sbjct: 843 EEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQE 902
Query: 71 TPGEDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHTVSKMLSNSIMCYRDIFYER 130
+ ++ +LK S S FE V K N + + ER
Sbjct: 903 ENESLKAHVQEVAQHNLKEASSA----------SQFEELEIVLKEKENELKRLEAMLKER 952
Query: 131 ESQLMQQTSLL 141
ES L +T LL
Sbjct: 953 ESDLSSKTQLL 963
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 27.3 bits (59), Expect = 7.1
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 17 EEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRT------WFLEMES 70
EEI +E ++L + + +++ L+ ++ + K L + ++ W +++
Sbjct: 843 EEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQE 902
Query: 71 TPGEDAMNTVKMTTKDLKYDRSLIDKAGFERTDSNFERSHTVSKMLSNSIMCYRDIFYER 130
+ ++ +LK S S FE V K N + + ER
Sbjct: 903 ENESLKAHVQEVAQHNLKEASSA----------SQFEELEIVLKEKENELKRLEAMLKER 952
Query: 131 ESQLMQQTSLL 141
ES L +T LL
Sbjct: 953 ESDLSSKTQLL 963
>gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform a
[Homo sapiens]
Length = 2436
Score = 27.3 bits (59), Expect = 7.1
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 15 SMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRTWFLEMESTPGE 74
+ EEI +M + + +LEL + + Q L K + + + G R L+ E T G
Sbjct: 1096 AQEEIRREMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILD-EPTAGV 1154
Query: 75 D 75
D
Sbjct: 1155 D 1155
>gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform b
[Homo sapiens]
Length = 2466
Score = 27.3 bits (59), Expect = 7.1
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 15 SMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDGKRTWFLEMESTPGE 74
+ EEI +M + + +LEL + + Q L K + + + G R L+ E T G
Sbjct: 1126 AQEEIRREMDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILD-EPTAGV 1184
Query: 75 D 75
D
Sbjct: 1185 D 1185
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 26.9 bits (58), Expect = 9.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 5 LTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEK 54
LT D E + EE+T M + E +LE E E+++ + +K + E+
Sbjct: 948 LTKDIEILRRENEELTEKMKKAEEEYKLEKE-EEISNLKAAFEKNINTER 996
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,043,337
Number of Sequences: 37866
Number of extensions: 227610
Number of successful extensions: 785
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 773
Number of HSP's gapped (non-prelim): 38
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.