Guide to the Human Genome
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Name: CTAGE6 Sequence: fasta or formatted (777aa) NCBI GI: 146262005
Description:

CTAGE family, member 6

Referenced in:

T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         48           3
 C cysteine            0.9          7           1
 D aspartate           5.1         40           3
 E glutamate          12.1         94           4
 F phenylalanine       3.9         30           2
 G glycine             5.3         41           3
 H histidine           2.1         16           1
 I isoleucine          3.2         25           3
 K lysine              7.1         55           2
 L leucine            10.8         84           2
 M methionine          2.2         17           2
 N asparagine          4.4         34           1
 P proline             8.1         63           5
 Q glutamine           4.5         35           2
 R arginine            5.7         44           2
 S serine              8.0         62           2
 T threonine           4.0         31           2
 V valine              3.7         29           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.3         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CTAGE family, member 6 
LOC441294             0.995   hypothetical protein LOC441294 
CTAGE4                0.960   CTAGE family, member 4 
LOC643854             0.951   hypothetical protein LOC643854 
CTAGE5                0.827   CTAGE family, member 5 isoform 1 
CTAGE5                0.802   CTAGE family, member 5 isoform 2 
CTAGE5                0.793   CTAGE family, member 5 isoform 4 
CTAGE5                0.772   CTAGE family, member 5 isoform 3 
CTAGE1                0.725   cutaneous T-cell lymphoma-associated antigen 1 isofo...
MIA3                  0.141   melanoma inhibitory activity family, member 3 [Homo...
GCC2                  0.036   GRIP and coiled-coil domain-containing 2 
CENPF                 0.035   centromere protein F 
EEA1                  0.034   early endosome antigen 1, 162kD 
CCDC88A               0.034   coiled-coil domain containing 88A isoform 1 
CEP110                0.034   centrosomal protein 110kDa 
MYH3                  0.034   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CCDC88A               0.034   coiled-coil domain containing 88A isoform 2 
MYH13                 0.033   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH9                  0.033   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.033   myosin, heavy polypeptide 10, non-muscle 
GOLGB1                0.033   golgi autoantigen, golgin subfamily b, macrogolgin ...
KTN1                  0.032   kinectin 1 isoform a 
KTN1                  0.032   kinectin 1 isoform a 
LOC645202             0.032   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.031   golgi autoantigen, golgin subfamily a-like 
GOLGA4                0.031   golgi autoantigen, golgin subfamily a, 4 
MYO18A                0.031   myosin 18A isoform b 
MYO18A                0.031   myosin 18A isoform a 
TRIP11                0.031   thyroid hormone receptor interactor 11 
MYH6                  0.031   myosin heavy chain 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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