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Search of human proteins with 239747084
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo
sapiens]
(313 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo ... 655 0.0
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 46 4e-05
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 46 4e-05
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 42 5e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 42 7e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 42 7e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 7e-04
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho... 40 0.002
gi|20070376 solute carrier family 38, member 10 isoform b [Homo ... 40 0.003
gi|156071474 solute carrier family 4, anion exchanger, member 2 ... 40 0.003
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 40 0.003
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 39 0.006
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 39 0.006
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 39 0.008
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.008
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 38 0.010
gi|38176151 Lunapark [Homo sapiens] 37 0.017
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 37 0.023
gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo ... 37 0.023
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 37 0.030
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 37 0.030
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 37 0.030
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 37 0.030
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 37 0.030
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s... 37 0.030
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 37 0.030
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 36 0.039
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.039
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 36 0.039
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 36 0.039
>gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo
sapiens]
Length = 313
Score = 655 bits (1689), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MTPGPPCPVHLSALCGLREAHTGHRILYMIKLLPESQLHGGGDDRTSEDVPPKLLRPSTP 60
MTPGPPCPVHLSALCGLREAHTGHRILYMIKLLPESQLHGGGDDRTSEDVPPKLLRPSTP
Sbjct: 1 MTPGPPCPVHLSALCGLREAHTGHRILYMIKLLPESQLHGGGDDRTSEDVPPKLLRPSTP 60
Query: 61 WDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAA 120
WDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAA
Sbjct: 61 WDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAA 120
Query: 121 RPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLAT 180
RPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLAT
Sbjct: 121 RPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLAT 180
Query: 181 LTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPLPHNGFGPRAE 240
LTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPLPHNGFGPRAE
Sbjct: 181 LTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPLPHNGFGPRAE 240
Query: 241 KRIMEDGAQRGRENPSLPSASLSKHQPLTLQFADFPGHLNRPCQVKEAGDTPPRKPGATP 300
KRIMEDGAQRGRENPSLPSASLSKHQPLTLQFADFPGHLNRPCQVKEAGDTPPRKPGATP
Sbjct: 241 KRIMEDGAQRGRENPSLPSASLSKHQPLTLQFADFPGHLNRPCQVKEAGDTPPRKPGATP 300
Query: 301 RLGLQASRCRTAP 313
RLGLQASRCRTAP
Sbjct: 301 RLGLQASRCRTAP 313
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 46.2 bits (108), Expect = 4e-05
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 57 PSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPD 116
P P + P +F RA S G E + + PA G R R P+
Sbjct: 102 PFAPGRISPPAPQAFLAQRSPARA---SPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPE 158
Query: 117 SPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSG 176
S AA PG +PSP + + + +R+ RR+S L P+ A P P +P S
Sbjct: 159 SAAAAPGRSPSPADPGSTSSA-----TRVPRARRSSRRALQPRHAAPDAPGAP-----SR 208
Query: 177 SLATLTYPSQHRRYLNRRP 195
S + T P R +RRP
Sbjct: 209 STSQATPPPAPRFPASRRP 227
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 46.2 bits (108), Expect = 4e-05
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 57 PSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPD 116
P P + P +F RA S G E + + PA G R R P+
Sbjct: 102 PFAPGRISPPAPQAFLAQRSPARA---SPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPE 158
Query: 117 SPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSG 176
S AA PG +PSP + + + +R+ RR+S L P+ A P P +P S
Sbjct: 159 SAAAAPGRSPSPADPGSTSSA-----TRVPRARRSSRRALQPRHAAPDAPGAP-----SR 208
Query: 177 SLATLTYPSQHRRYLNRRP 195
S + T P R +RRP
Sbjct: 209 STSQATPPPAPRFPASRRP 227
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 42.4 bits (98), Expect = 5e-04
Identities = 73/283 (25%), Positives = 108/283 (38%), Gaps = 41/283 (14%)
Query: 34 PESQLHGGGDDRTSEDVP----PKLLRPSTPW--DATKHPPGSFFPSAHERRAVGCSGRR 87
PE+ + ++ D P PK P+ P D K PPG P+ R R
Sbjct: 414 PETDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPG---PAPEPEREAETEPER 470
Query: 88 GIKRRELR--------PRRSPAEPGSARRNRPARVPDSPAARP--GAAPSPPERWADFAV 137
G R P SP P S ++RPA + PAA P AA SPP ++
Sbjct: 471 GAGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSL 530
Query: 138 NLNFPSRLQP-CRRTSAPLLAPQVARPAFPKSPG--SLRSSGSLATLTYPSQHRRYLNR- 193
+ + +P R AP + A P G LR + + + ++ R ++R
Sbjct: 531 DAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRP 590
Query: 194 -RPATCLRPAGSSGSGWAVSGEPKAQAQL-GLKGTRLPLP-HNGFGPR--AEKRIMEDGA 248
A+ P SG W +++A L L+G LP P H GPR AE+ + G
Sbjct: 591 LERASGRLPLARSGPVW------RSEAALDDLQG--LPEPQHAKPGPRKLAERGPQDSGD 642
Query: 249 QRG-----RENPSLPSASLSKHQPLTLQFADFPGHLNRPCQVK 286
+ R++P +A+ +P P P VK
Sbjct: 643 RAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPVK 685
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.0 bits (97), Expect = 7e-04
Identities = 76/288 (26%), Positives = 98/288 (34%), Gaps = 48/288 (16%)
Query: 48 EDVPPKLLRPSTPWDATKHPPGSF-FPSAHERRAVGCS-----GRRGIKRRELRPRRSPA 101
+ +PP + P ++ H GS P + + G + G RG R+SP
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPL 240
Query: 102 EPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVA 161
S NRP P A P PP N PS R + P PQ
Sbjct: 241 SSSSPFSNRPPLPPTPSRALDDKPPPPPPPVG------NRPS----IHREAVPPPPPQNN 290
Query: 162 RPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPK-AQAQ 220
+P P +P SS + PS RP P SSG+ P+ Q
Sbjct: 291 KPPVPSTPRPSASSQAPPPPPPPS--------RPGPPPLPPSSSGN----DETPRLPQRN 338
Query: 221 LGLKGTRLPLPHNGFG-----PRAEKRIMEDGAQRGRENPSLP------SASLSKHQPLT 269
L L + PLP G P +E+ GR P P + S S+ P T
Sbjct: 339 LSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPAT 398
Query: 270 LQF-----ADFPGHLNRPCQVKE---AGDTPPRKPGATPRLGLQASRC 309
Q D P RP + AG PP P + R G Q S C
Sbjct: 399 PQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPC 446
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 42.0 bits (97), Expect = 7e-04
Identities = 76/288 (26%), Positives = 98/288 (34%), Gaps = 48/288 (16%)
Query: 48 EDVPPKLLRPSTPWDATKHPPGSF-FPSAHERRAVGCS-----GRRGIKRRELRPRRSPA 101
+ +PP + P ++ H GS P + + G + G RG R+SP
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPL 240
Query: 102 EPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVA 161
S NRP P A P PP N PS R + P PQ
Sbjct: 241 SSSSPFSNRPPLPPTPSRALDDKPPPPPPPVG------NRPS----IHREAVPPPPPQNN 290
Query: 162 RPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPK-AQAQ 220
+P P +P SS + PS RP P SSG+ P+ Q
Sbjct: 291 KPPVPSTPRPSASSQAPPPPPPPS--------RPGPPPLPPSSSGN----DETPRLPQRN 338
Query: 221 LGLKGTRLPLPHNGFG-----PRAEKRIMEDGAQRGRENPSLP------SASLSKHQPLT 269
L L + PLP G P +E+ GR P P + S S+ P T
Sbjct: 339 LSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPAT 398
Query: 270 LQF-----ADFPGHLNRPCQVKE---AGDTPPRKPGATPRLGLQASRC 309
Q D P RP + AG PP P + R G Q S C
Sbjct: 399 PQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPC 446
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.0 bits (97), Expect = 7e-04
Identities = 52/188 (27%), Positives = 71/188 (37%), Gaps = 28/188 (14%)
Query: 34 PESQLHGGGDDRTSEDVPPKLLRPSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRE 93
P S G GD SE RPS+P ATK P + +++ ++
Sbjct: 298 PASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKK----------EKSA 347
Query: 94 LRPRRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSA 153
RP SP E S PA P A R G +P P +N PS P R S
Sbjct: 348 TRPSPSP-ERSSTGPEPPAPTP-LLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSP 405
Query: 154 PLLAPQVARPAFPKSPGSL---RSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWA 210
PKSP L SS S P++ R+ + P + +PA + GS
Sbjct: 406 ------------PKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPES-PKPAPAPGSHRE 452
Query: 211 VSGEPKAQ 218
+S P ++
Sbjct: 453 ISSSPTSK 460
Score = 33.5 bits (75), Expect = 0.25
Identities = 57/227 (25%), Positives = 78/227 (34%), Gaps = 33/227 (14%)
Query: 98 RSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLA 157
R PA +A AR P P A A P A A+NL P RT+ A
Sbjct: 2231 RIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAA--AMNLASP-------RTAVAPSA 2281
Query: 158 PQVARPAFPKSPG----SLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSG 213
+A P P +P R+ +LA L+ + P T SS +
Sbjct: 2282 VNLADPRTPTAPAVNLAGARTPAALAALSLTG------SGTPPTAANYPSSSRT------ 2329
Query: 214 EPKAQAQLGLKGTR---LPLPHNGFGPRAEKRIMEDGAQRGRENPSLPSASLSKHQPLTL 270
P+A A L G R P N G R + R P+L A+L+ +
Sbjct: 2330 -PQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLS 2388
Query: 271 QFADFPGHLNRPCQVKEAGDTPPRKPG----ATPRLGLQASRCRTAP 313
+ G + P + TPP P + R +SR AP
Sbjct: 2389 AYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAP 2435
Score = 30.0 bits (66), Expect = 2.8
Identities = 60/256 (23%), Positives = 82/256 (32%), Gaps = 32/256 (12%)
Query: 57 PSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPD 116
P+ T+ P S R G S R RR R+PA G +R PAR
Sbjct: 620 PARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSG 679
Query: 117 -----SPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGS 171
+PA R + P R R S L+ + P+ G
Sbjct: 680 RSRSRTPARRGRSRSRTPRRG----------------RSRSRSLVRRGRSHSRTPQRRGR 723
Query: 172 LRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPLP 231
SS + SQ R N P S S S KA+++L L R L
Sbjct: 724 SGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSL---RRSLS 780
Query: 232 HNGFGPRAEKRIMEDGAQRGRENPSL-----PSASLSKHQPLTLQFADFP---GHLNRPC 283
+ P+ + + ++ G P P S S P Q + P H +
Sbjct: 781 GSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSP 840
Query: 284 QVKEAGDTPPRKPGAT 299
K TPPR+ T
Sbjct: 841 HPKVKSGTPPRQGSIT 856
Score = 29.6 bits (65), Expect = 3.6
Identities = 75/282 (26%), Positives = 104/282 (36%), Gaps = 64/282 (22%)
Query: 86 RRGIKRRELRPR---RSPAEPGSARRNRPARVPDS----PAARPGAAPSPPERWADFAVN 138
RRG R R R RSPA G +R PAR S PA R + +P R +
Sbjct: 550 RRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRS----R 605
Query: 139 LNFPSR------LQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLN 192
P+R P RR S V R + +SP R SG + T P++ R +
Sbjct: 606 SRTPARRGRSRSRTPARRRSR--TRSPVRRRSRSRSPA--RRSGRSRSRT-PARRGRSRS 660
Query: 193 RRPA--------TCLRPAGSSGS------GWAVSGEP-------KAQAQLGLKGTRLPLP 231
R PA T R +G S S G + S P ++ + G +R P
Sbjct: 661 RTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQR 720
Query: 232 HNGFGPRAEKRIMEDGAQRGRENPSLP-----------SASLSKHQPLTLQFADFPGHL- 279
G +E++ +QR + S P S SLS + L
Sbjct: 721 RGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLS 780
Query: 280 -NRPCQVKEAGDTPPRK-------PGATPRLGLQASRCRTAP 313
+ PC K+ TPPR+ P A R + SR ++P
Sbjct: 781 GSSPCP-KQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSP 821
>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
sapiens]
Length = 1781
Score = 40.4 bits (93), Expect = 0.002
Identities = 72/297 (24%), Positives = 104/297 (35%), Gaps = 63/297 (21%)
Query: 53 KLLRPSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRP- 111
K RP+ P PPGS R A G S +RRE+ P +PA G ++ RP
Sbjct: 1327 KAPRPAKP----HKPPGSMGLCGGGREAAGRS-HHADRRREVSP--APAVAGQSKGYRPK 1379
Query: 112 --ARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSP 169
+ +P G + PP + +D + +P+++ P RP+ P
Sbjct: 1380 LYSSGSSTPTGLAGGSRDPPRQPSDMGSRVGYPAQVYKTASAETP-------RPSQLAQP 1432
Query: 170 GSLRSSGSLATLTYPSQ-----HRRYLNRRPATCLRPAGSSGSGWAVS-------GEPKA 217
+ S S+ + Q H R RP S V G+P+
Sbjct: 1433 SPFQLSASVPKSFFSKQPVRNKHPTGWKRTEEPPPRPLPFSDPKKQVDTNTKNVFGQPRL 1492
Query: 218 QAQLGLKGTRLPLPH---------------NGFGPRAEK---RIMEDGAQR--------- 250
+A L+ R P + + GP E+ + + G QR
Sbjct: 1493 RA--SLRDLRSPRKNYKSTIEDDLKKLIIMDNLGPEQERDTGQSPQKGLQRTLSDESLCS 1550
Query: 251 GRENPSLPS-ASLSKHQPLTLQFAD---FPGHLNRPCQVKEAGDTPPRKPGATPRLG 303
GR PS S A L P + F FP P + + PP PGATP G
Sbjct: 1551 GRREPSFASPAGLEPGLPSDVLFTSTCAFPSS-TLPARRQHQHPHPPVGPGATPAAG 1606
>gi|20070376 solute carrier family 38, member 10 isoform b [Homo
sapiens]
Length = 780
Score = 40.0 bits (92), Expect = 0.003
Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 5/150 (3%)
Query: 41 GGDDRTSEDVPPKLLRPSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSP 100
GG ++ PP T A G P E+ A G G R + R+
Sbjct: 621 GGGEKAKGGPPPGNAAGDTGQPAEDSDHGGKPPLPAEKPAPG-PGLPPEPREQRDVERAG 679
Query: 101 AEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQV 160
+++ A PA+ PG+ P+ W D V L P+R P P A Q
Sbjct: 680 GNQAASQLEGKASALQPPASGPGSGSPLPQPWGDAQVILGSPAR--PPFSFQPP--AEQT 735
Query: 161 ARPAFPKSPGSLRSSGSLATLTYPSQHRRY 190
R AF P S SG+L + P +H R+
Sbjct: 736 PRRAFCSLPISSLLSGNLLSALLPFKHLRH 765
>gi|156071474 solute carrier family 4, anion exchanger, member 2
(erythrocyte membrane protein band 3-like 1) [Homo
sapiens]
Length = 1241
Score = 39.7 bits (91), Expect = 0.003
Identities = 55/232 (23%), Positives = 79/232 (34%), Gaps = 35/232 (15%)
Query: 93 ELRPRRSPAEPGSARRNRPARVP--DSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRR 150
+ R R++P PG R RP P ++P G A+ A L PS +
Sbjct: 92 DARRRKTPQGPGRKPRRRPGASPTGETPTIEEGEEDEDEASEAEGARALTQPSPVSTPSS 151
Query: 151 TSAPL----LAPQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSG 206
L A + A P SP L + + +Q + A + A +
Sbjct: 152 VQFFLQEDDSADRKAERTSPSSPAPLPHQEATPRASKGAQAGTQVEEAEAEAVAVASGTA 211
Query: 207 SG--WAVSGEPKAQAQLGLKGTRLPLPHNGFGPRAEKRIMEDGAQRGRENPSLPSASLSK 264
G SG P +AQ G H + + +RI G+ G E LP +
Sbjct: 212 GGDDGGASGRPLPKAQPG---------HRSYNLQERRRI---GSMTGAEQALLPRVPTDE 259
Query: 265 HQPLTL-----------QFADFPGHLNRPCQVKEAGDTPP----RKPGATPR 301
+ TL +F D PG + G T R+PG TPR
Sbjct: 260 IEAQTLATADLDLMKSHRFEDVPGVRRHLVRKNAKGSTQSGREGREPGPTPR 311
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/127 (25%), Positives = 45/127 (35%), Gaps = 3/127 (2%)
Query: 24 HRILYMIKLLPESQLHGGGDDRTSEDVPPKLLRPSTPWDATKHPPGSFFPSAHERRAVGC 83
H L + LP S H T+ P + P P D T PP + S+
Sbjct: 1097 HHSLSSSESLPGSPTHSLSPSPTT---PCRSPAPDVPADTTASPPSASPSSSSPASPAAA 1153
Query: 84 SGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPS 143
R L + P P + RR + +P SP A P + PP + + P+
Sbjct: 1154 GHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSPLPGHPPAPA 1213
Query: 144 RLQPCRR 150
R RR
Sbjct: 1214 RSPRLRR 1220
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 38.9 bits (89), Expect = 0.006
Identities = 63/246 (25%), Positives = 84/246 (34%), Gaps = 18/246 (7%)
Query: 48 EDVPPKLLRPST-------PWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSP 100
+ +P K PST P K P SF SA + R + R RP P
Sbjct: 366 KSLPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAEKP 425
Query: 101 AE--PGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAP 158
+ PG R P+ P P P P A + + RTS P
Sbjct: 426 IQRNPGMPRPPPPSTRPLPPTTSSSKKPIPT--LARTEAKITSHASKPASARTSTHKPPP 483
Query: 159 QVARPAFPK-SPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKA 217
A + P +PGS RS+ AT+ P+ PA + +GS + E A
Sbjct: 484 FTALSSSPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSE--A 541
Query: 218 QAQLGLKGT-RLPLPHNGFGPRAEKRIMEDGAQRGRENPSLPSASLSKHQPLTLQFADFP 276
+ G K + R P+P P R + R +P P S L L A F
Sbjct: 542 SKKAGPKSSPRKPVP---LRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVLAPAQFL 598
Query: 277 GHLNRP 282
RP
Sbjct: 599 SSSPRP 604
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 38.9 bits (89), Expect = 0.006
Identities = 42/116 (36%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 63 ATKHPPGSF--FPSAHERRAVGCSGRRGIKRRELRPRRSPA-EPGSARRNRPARVPDSPA 119
A HP S F SA R A G +RG P SP EP S + PA + PA
Sbjct: 142 APPHPRESTTSFASAPPRPAPGLEPQRG-------PAASPPQEPSSRPPSPPAGLSTEPA 194
Query: 120 ARPGAAPSP--PERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLR 173
PG AP P P + A+ N P AP +P A PA P +PG LR
Sbjct: 195 G-PGTAPRPFLPGQPAEVDGN-------PPPAAPEAPAASPSTASPA-PAAPGDLR 241
Score = 30.0 bits (66), Expect = 2.8
Identities = 31/105 (29%), Positives = 38/105 (36%), Gaps = 7/105 (6%)
Query: 100 PAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAV----NLNFPSRLQPCRRTSAPL 155
P +P N P P++PAA P A P D L S+L C L
Sbjct: 205 PGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPGDLRQEHFDRLIRRSKLW-CYAKGFAL 263
Query: 156 LAPQVAR-PAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCL 199
P + R P P + G R + L P R RRPA L
Sbjct: 264 DTPSLRRGPERPPAKGPARGAAKKRRLPAPPP-RTAQPRRPAPTL 307
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 38.5 bits (88), Expect = 0.008
Identities = 36/120 (30%), Positives = 42/120 (35%), Gaps = 13/120 (10%)
Query: 96 PRRSPAEPGSARRNRPARVPDSPAAR---PGAAPSPPERWADFAVNLNFPSRLQPCRRTS 152
PRR P+ + R P R P P A P PS RWA A P RR
Sbjct: 2044 PRRRPSSFVTVRVKTPRRTPIMPTANIKLPPGLPSHLPRWAPGA-----REAAAPVRRRE 2098
Query: 153 APLLAPQVARPAFPKSPGSLRSSGSLATLTY----PSQHRRYLNRRPATCLRPAGSSGSG 208
P P + L G+L L P RRY + P CL PA +G
Sbjct: 2099 PPARRPDQIHSVYITPGADLPVQGALEPLEEDGQPPGAKRRY-SDPPTYCLPPASGQTNG 2157
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 38.5 bits (88), Expect = 0.008
Identities = 61/235 (25%), Positives = 87/235 (37%), Gaps = 36/235 (15%)
Query: 42 GDDRTSEDVPPKL--LRPSTPWDATKHPPG-SFFPSAHERRAVGCSGRRGIKRRELRPRR 98
G +SED PK ++ +H P S PS +R+ + RG R RR
Sbjct: 497 GSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKE--TSPRG------RRRR 548
Query: 99 SPAEPGSARRNRPA--------RVPDSPAARPGAAPSP------PERWADFAVNLNFPSR 144
SP+ P + RR P+ R P P R +P P P R++ + +
Sbjct: 549 SPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSP-PIQRRYSPS 607
Query: 145 LQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGS 204
P RRT++P P R A P P R S S P Q + +R + L
Sbjct: 608 PPPKRRTASP--PPPPKRRASPSPPPKRRVSHS----PPPKQRSSPVTKRRSPSLSSKHR 661
Query: 205 SGSGWAVSGEPKAQAQLGLKGTRLP---LPHNGFGPRAEKRIMEDGAQRGRENPS 256
GS + S Q + + P P P +R QR R++PS
Sbjct: 662 KGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQR-RQSPS 715
Score = 28.5 bits (62), Expect = 8.0
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 86 RRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRL 145
RR RR PRR P P R+R +R P R A+ S + + + + P +
Sbjct: 319 RRPSPRRRTPPRRMPPPP----RHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKK- 373
Query: 146 QPCRRTSAP-----LLAPQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLR 200
P +RTS+P L+P + P P S ++ T P+ + R+ +
Sbjct: 374 -PPKRTSSPPRKTRRLSPSASPPRRRHRP-SPPATPPPKTRHSPTPQQSNRTRKSRVSVS 431
Query: 201 PAGSSGSGWAVSGEPKAQA 219
P +SG G K ++
Sbjct: 432 PGRTSGKVTKHKGTEKRES 450
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 38.1 bits (87), Expect = 0.010
Identities = 54/232 (23%), Positives = 85/232 (36%), Gaps = 36/232 (15%)
Query: 51 PPKLLRPSTPWDATKHPPG-----SFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGS 105
PP+ + P T + PP S P+ E +G G+ RRE+ P PG+
Sbjct: 1149 PPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEA---PKSPGT 1205
Query: 106 ARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAF 165
R++ R SP A G A P ++ T+ P + P+ +
Sbjct: 1206 TRKDNIGRSQPSPQA--GLAGPGPAGYS-----------------TARPTIPPRAGVISA 1246
Query: 166 PKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGE---PKAQAQLG 222
P+S + S LT SQ + + +T L + + P + Q
Sbjct: 1247 PQS----HARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEP 1302
Query: 223 LKGTRLPLPHNGFGPRAEKRIMEDGAQRGRENPSLPSASLSKHQPLTLQFAD 274
L P+P + GP+ R R + SLPS + S+ Q T +D
Sbjct: 1303 LVPVAAPMPQS--GPQPNLETPPQPPPRSRSSHSLPSEASSQPQVKTNGISD 1352
Score = 30.0 bits (66), Expect = 2.8
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 96 PRRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPL 155
P++ PA+P +R P R P +P RP PP P+R + + P
Sbjct: 1134 PQKDPAQPLEPKRPPPPR-PVAPPTRPAPPQRPP---PPSGARSPAPTRKEFGGIGAPP- 1188
Query: 156 LAPQVARPAF--PKSPGSLR 173
+P VAR PKSPG+ R
Sbjct: 1189 -SPGVARREMEAPKSPGTTR 1207
>gi|38176151 Lunapark [Homo sapiens]
Length = 428
Score = 37.4 bits (85), Expect = 0.017
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 89 IKRRELRPRRSPAEPGSARRNRPARVPDSPA-ARPGAAP-SPPERWADFAVNLNFPSRLQ 146
I++R R P S + P +VP SP + +AP PPER A++ N R
Sbjct: 166 IRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHL 225
Query: 147 PCRRTSAPLL-----APQVARPAFPKSPGSL 172
TS P + P +ARP P+ G+L
Sbjct: 226 GSPATSVPGMGLHPPGPPLARPILPRERGAL 256
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 37.0 bits (84), Expect = 0.023
Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 36/224 (16%)
Query: 51 PPKLLRPSTPWDATKHPPG-----SFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGS 105
PP+ + P T + PP S P+ E +G G+ RRE+ P PG+
Sbjct: 1149 PPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEA---PKSPGT 1205
Query: 106 ARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAF 165
R++ R SP A G A P ++ T+ P + P+ +
Sbjct: 1206 TRKDNIGRSQPSPQA--GLAGPGPAGYS-----------------TARPTIPPRAGVISA 1246
Query: 166 PKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGE---PKAQAQLG 222
P+S + S LT SQ + + +T L + + P + Q
Sbjct: 1247 PQS----HARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEP 1302
Query: 223 LKGTRLPLPHNGFGPRAEKRIMEDGAQRGRENPSLPSASLSKHQ 266
L P+P + GP+ R R + SLPS + S+ Q
Sbjct: 1303 LVPVAAPMPQS--GPQPNLETPPQPPPRSRSSHSLPSEASSQPQ 1344
Score = 30.0 bits (66), Expect = 2.8
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 96 PRRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPL 155
P++ PA+P +R P R P +P RP PP P+R + + P
Sbjct: 1134 PQKDPAQPLEPKRPPPPR-PVAPPTRPAPPQRPP---PPSGARSPAPTRKEFGGIGAPP- 1188
Query: 156 LAPQVARPAF--PKSPGSLR 173
+P VAR PKSPG+ R
Sbjct: 1189 -SPGVARREMEAPKSPGTTR 1207
>gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo
sapiens]
Length = 268
Score = 37.0 bits (84), Expect = 0.023
Identities = 50/199 (25%), Positives = 71/199 (35%), Gaps = 51/199 (25%)
Query: 117 SPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSG 176
SPAA P AAP L P + P R +P +P P F S +L ++G
Sbjct: 85 SPAAEPSAAP------------LRIPEQYSP-SRIKSPRSSPGFRGPVFWVSERALATAG 131
Query: 177 S------LATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPL 230
S L LT+ + A G S P + +G R P
Sbjct: 132 SWCPGPLLTQLTFQNS--------------AAQPGGEDLTPSQSPVRWREGRHRGCRAPF 177
Query: 231 PHNGFGPRAEKRIMEDGAQRGRENPSLPSASLSKH--QPLTLQFADFPGHLNRPCQ---- 284
P G+ P G+ GR P P +L + +P + A + RPC+
Sbjct: 178 PARGYSP---------GSGAGR--PGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTAN 226
Query: 285 -VKEAGDTPPRKPGATPRL 302
+ + + RK A PRL
Sbjct: 227 PISQTANRGARKSSALPRL 245
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 36.6 bits (83), Expect = 0.030
Identities = 59/189 (31%), Positives = 71/189 (37%), Gaps = 35/189 (18%)
Query: 81 VGCSGRRGIKRRELRPRRSPAE-PGSARRNRPARVPDSPAARPGAAPSPPERWADFAVN- 138
VG + RRG R LR R+P+ P R RP R A AA PP+R A
Sbjct: 40 VGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGG 99
Query: 139 ---LNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRP 195
+ R QP RR P AP+ RPA PG +S A L + R R
Sbjct: 100 VEAASGEERSQP-RRPRRPPPAPRRPRPA----PGRRKSLYEAAPLLTREKGGRSGRR-- 152
Query: 196 ATCLRPAGSSGSGWA------VSGEPKAQAQLGLKGTRLP-LPHNGFGPRAEKRIMEDGA 248
GSGW+ V G + A L T P GF R E+
Sbjct: 153 ------GDRGGSGWSHGHTARVGGTGDSSAGL----TTFPGSSRGGFSGR------EEEP 196
Query: 249 QRGRENPSL 257
+R R PSL
Sbjct: 197 RRERRQPSL 205
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 36.6 bits (83), Expect = 0.030
Identities = 59/189 (31%), Positives = 71/189 (37%), Gaps = 35/189 (18%)
Query: 81 VGCSGRRGIKRRELRPRRSPAE-PGSARRNRPARVPDSPAARPGAAPSPPERWADFAVN- 138
VG + RRG R LR R+P+ P R RP R A AA PP+R A
Sbjct: 40 VGRARRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGG 99
Query: 139 ---LNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRP 195
+ R QP RR P AP+ RPA PG +S A L + R R
Sbjct: 100 VEAASGEERSQP-RRPRRPPPAPRRPRPA----PGRRKSLYEAAPLLTREKGGRSGRR-- 152
Query: 196 ATCLRPAGSSGSGWA------VSGEPKAQAQLGLKGTRLP-LPHNGFGPRAEKRIMEDGA 248
GSGW+ V G + A L T P GF R E+
Sbjct: 153 ------GDRGGSGWSHGHTARVGGTGDSSAGL----TTFPGSSRGGFSGR------EEEP 196
Query: 249 QRGRENPSL 257
+R R PSL
Sbjct: 197 RRERRQPSL 205
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.030
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 63 ATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAARP 122
A++H P+A R + G G++R R S A P S+ PAR S P
Sbjct: 203 ASEHSTTEPSPAARRRPSAG----GGLQRPASRSLSSSATPLSS----PARSGPSARGTP 254
Query: 123 GAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARP---AFPKSPGSLRSSGSLA 179
AP+ P + + P ++ P R+ +AP L P + P P +P S + SL
Sbjct: 255 -RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQ 313
Query: 180 TLTYP 184
TL P
Sbjct: 314 TLPSP 318
Score = 32.3 bits (72), Expect = 0.56
Identities = 54/217 (24%), Positives = 76/217 (35%), Gaps = 23/217 (10%)
Query: 97 RRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLL 156
+R A+ G+A R AR P RP +P PP A+ + L L
Sbjct: 4 KRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRV-----LGAAGAVGRKPL 58
Query: 157 APQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPK 216
A + P S +G T P+ R R P G S SG +
Sbjct: 59 AERAGGIGGATIPESAPRAGPTRTSRPPASGRG--ERAPPAKNTSPGPVSSPGRASGTTR 116
Query: 217 AQAQLGLKGTRLPLPH---NGFGPRAEKR-IMEDGAQRGRENPS--LPSASLSKHQPLTL 270
LG KG R+ G A KR + GA+R P+ PS ++++
Sbjct: 117 -PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRS---- 171
Query: 271 QFADFPGHLNRPCQVKEAGDTPPRKPGATPRLGLQAS 307
+ A L RP A PR P PR + ++
Sbjct: 172 RAAGTEVGLPRP-----APSARPRPPTEGPRKSVSSA 203
Score = 28.9 bits (63), Expect = 6.2
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 22/176 (12%)
Query: 51 PPKLLRPSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNR 110
PP + PS P P + P A A L+ + P + A
Sbjct: 438 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAP----------PLQLAKPPPQAPPALATP 487
Query: 111 PAR-VPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLL--------APQVA 161
P + +P PA+ PG AP P + P + P +APLL +P +
Sbjct: 488 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPV--LAAPLLQVPPSPPASPTLQ 545
Query: 162 RPAFPKSPGSLRS-SGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPK 216
P P +PG S SG TL +R P++ L +G + + P+
Sbjct: 546 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPE 601
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 36.6 bits (83), Expect = 0.030
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 199 LRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPLPHNGFGPRAEKRIMEDGAQRGRENPSLP 258
+ P S G G ++ P+ + + G P P+ G P ++++ G Q+G P P
Sbjct: 362 MSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQP 421
Query: 259 SASLS-KHQPLTLQ 271
S + + P+T+Q
Sbjct: 422 YGSQTPQRYPMTMQ 435
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 36.6 bits (83), Expect = 0.030
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 199 LRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPLPHNGFGPRAEKRIMEDGAQRGRENPSLP 258
+ P S G G ++ P+ + + G P P+ G P ++++ G Q+G P P
Sbjct: 362 MSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQP 421
Query: 259 SASLS-KHQPLTLQ 271
S + + P+T+Q
Sbjct: 422 YGSQTPQRYPMTMQ 435
>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
sapiens]
Length = 468
Score = 36.6 bits (83), Expect = 0.030
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 3 PGPP---CPVHL---SALCGLREAHTGHRILYMIKLLPESQLHGGGDDRTSEDVPPKLLR 56
PGPP P +L SAL L EA +LL + + GGG D DVP LL
Sbjct: 119 PGPPIYAAPSNLKRASALLNLYEAPE--------ELLADGE--GGGTDEGIYDVP--LLG 166
Query: 57 PSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPD 116
P P + PPG+ ++H++ + R RPR AE S R VP+
Sbjct: 167 PEAP--PSPEPPGAL--ASHDQDTLAQLLARSPPPPH-RPRLPSAESLSRRPLPALPVPE 221
Query: 117 SPAARPGAAPSP 128
+P+ P +P+P
Sbjct: 222 APSPSPVPSPAP 233
>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
sapiens]
Length = 561
Score = 36.6 bits (83), Expect = 0.030
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 3 PGPP---CPVHL---SALCGLREAHTGHRILYMIKLLPESQLHGGGDDRTSEDVPPKLLR 56
PGPP P +L SAL L EA +LL + + GGG D DVP LL
Sbjct: 212 PGPPIYAAPSNLKRASALLNLYEAPE--------ELLADGE--GGGTDEGIYDVP--LLG 259
Query: 57 PSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPD 116
P P + PPG+ ++H++ + R RPR AE S R VP+
Sbjct: 260 PEAP--PSPEPPGAL--ASHDQDTLAQLLARSPPPPH-RPRLPSAESLSRRPLPALPVPE 314
Query: 117 SPAARPGAAPSP 128
+P+ P +P+P
Sbjct: 315 APSPSPVPSPAP 326
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 36.2 bits (82), Expect = 0.039
Identities = 42/147 (28%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 47 SEDVPPKLLR-PSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGS 105
S PP+ P TP T+ PP S P E A P +PA P S
Sbjct: 181 SSSAPPETTAAPPTPSATTQAPPSSSAPP--ETTAA----------PPTPPATTPAPPSS 228
Query: 106 ARRNRPARVPDSPAA---RPGAAPSPPERWA----DFAVNLNFPSRLQPCRRTSAPLLAP 158
+ P +P+A P ++ +PPE A A L+ S P T+AP P
Sbjct: 229 SAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAP-PTP 287
Query: 159 QVARPAFPKSPGSLRSSGSLATLTYPS 185
PA P SP ++ A +T P+
Sbjct: 288 SATTPAPPSSPAPQETTA--APITTPN 312
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 36.2 bits (82), Expect = 0.039
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 10/145 (6%)
Query: 63 ATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAARP 122
A++H P+A R + G G++R R S A P S+ PAR S P
Sbjct: 212 ASEHSTTEPSPAARRRPSAG----GGLQRPASRSLSSSATPLSS----PARSGPSARGTP 263
Query: 123 GAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSGSLATLT 182
AP+ P + + P ++ P R+ +AP L P + P SP + S + TL
Sbjct: 264 -RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLP 322
Query: 183 YPSQHRRYLNRRPATCLRPAGSSGS 207
+ H L + AT L A S S
Sbjct: 323 -ATPHSSSLTCQLATPLPLAPPSPS 346
Score = 31.6 bits (70), Expect = 0.95
Identities = 53/220 (24%), Positives = 79/220 (35%), Gaps = 20/220 (9%)
Query: 97 RRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWADFAVNLNFPSRL---QPCRRTSA 153
+R A+ G+A R AR P RP +P PP A+ + + +P +
Sbjct: 4 KRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAG 63
Query: 154 PLLAPQVARPAFPKSPGSLRSSGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSG 213
+ + A P + S + P R PA P S G A SG
Sbjct: 64 GIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA-SG 122
Query: 214 EPKAQAQLGLKGTRLPLPH---NGFGPRAEKR-IMEDGAQRGRENPS--LPSASLSKHQP 267
+ LG KG R+ G A KR + GA+R P+ PS ++++
Sbjct: 123 TTR-PGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRS- 180
Query: 268 LTLQFADFPGHLNRPCQVKEAGDTPPRKPGATPRLGLQAS 307
+ A L RP A PR P PR + ++
Sbjct: 181 ---RAAGTEVGLPRP-----APSARPRPPTEGPRKSVSSA 212
Score = 28.9 bits (63), Expect = 6.2
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 22/176 (12%)
Query: 51 PPKLLRPSTPWDATKHPPGSFFPSAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNR 110
PP + PS P P + P A A L+ + P + A
Sbjct: 477 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAP----------PLQLAKPPPQAPPALATP 526
Query: 111 PAR-VPDSPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLL--------APQVA 161
P + +P PA+ PG AP P + P + P +APLL +P +
Sbjct: 527 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPV--LAAPLLQVPPSPPASPTLQ 584
Query: 162 RPAFPKSPGSLRS-SGSLATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPK 216
P P +PG S SG TL +R P++ L +G + + P+
Sbjct: 585 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPE 640
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 36.2 bits (82), Expect = 0.039
Identities = 62/212 (29%), Positives = 75/212 (35%), Gaps = 54/212 (25%)
Query: 76 HERRAVGCSGRRGIKRRELRPRRSPA------EPGSARRNRPARVPDSPAARPGAAPSPP 129
H RR RRG +R L P +PA PG R R ARV + P+PP
Sbjct: 79 HRRR------RRGTRR--LPPALTPAGPYHSARPGGGARARAARV---------SPPTPP 121
Query: 130 ERWADFAVNLNFPSRLQPCRRTSAPL-------LAPQVARPAFP--KSPGSL-------R 173
D AV P+ L CR+T A L L+P + R A K PG L R
Sbjct: 122 RSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGR 181
Query: 174 SSGSLATLTYPSQHR---RYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPL 230
+G P + R R R TC PA G + QA G R L
Sbjct: 182 GAGGARVTHRPGRLRPRGRGRGRARRTC--PARRRGEEDLRVQDSCPQAGCRAMGQRRVL 239
Query: 231 PHNG----------FGPRAEKRIMEDGAQRGR 252
G FGPR + G G+
Sbjct: 240 KAEGARARARGGVCFGPRPGMQKRSGGGSGGQ 271
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 36.2 bits (82), Expect = 0.039
Identities = 62/212 (29%), Positives = 75/212 (35%), Gaps = 54/212 (25%)
Query: 76 HERRAVGCSGRRGIKRRELRPRRSPA------EPGSARRNRPARVPDSPAARPGAAPSPP 129
H RR RRG +R L P +PA PG R R ARV + P+PP
Sbjct: 79 HRRR------RRGTRR--LPPALTPAGPYHSARPGGGARARAARV---------SPPTPP 121
Query: 130 ERWADFAVNLNFPSRLQPCRRTSAPL-------LAPQVARPAFP--KSPGSL-------R 173
D AV P+ L CR+T A L L+P + R A K PG L R
Sbjct: 122 RSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGR 181
Query: 174 SSGSLATLTYPSQHR---RYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPL 230
+G P + R R R TC PA G + QA G R L
Sbjct: 182 GAGGARVTHRPGRLRPRGRGRGRARRTC--PARRRGEEDLRVQDSCPQAGCRAMGQRRVL 239
Query: 231 PHNG----------FGPRAEKRIMEDGAQRGR 252
G FGPR + G G+
Sbjct: 240 KAEGARARARGGVCFGPRPGMQKRSGGGSGGQ 271
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,147,105
Number of Sequences: 37866
Number of extensions: 1004276
Number of successful extensions: 5781
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 409
Number of HSP's that attempted gapping in prelim test: 5215
Number of HSP's gapped (non-prelim): 957
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.