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Search of human proteins with 239746566
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo
sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752069 PREDICTED: hypothetical protein [Homo sapiens] 440 e-124
gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo ... 440 e-124
gi|239757559 PREDICTED: hypothetical protein [Homo sapiens] 358 1e-99
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 52 5e-07
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 47 1e-05
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 47 1e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 1e-04
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 44 1e-04
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 44 1e-04
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 44 1e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 44 1e-04
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 43 2e-04
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|169171690 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|169171833 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|169171083 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239508966 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 42 3e-04
gi|112421108 capicua homolog [Homo sapiens] 42 4e-04
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo ... 42 5e-04
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 41 7e-04
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|148727370 immediate early response 5-like [Homo sapiens] 41 9e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.001
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.001
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
>gi|239752069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 440 bits (1132), Expect = e-124
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ 60
MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ
Sbjct: 1 MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ 60
Query: 61 AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK 120
AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK
Sbjct: 61 AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK 120
Query: 121 LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAAC 180
LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAAC
Sbjct: 121 LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAAC 180
Query: 181 TPRAPSAPRPTAHLGFVNSGRESLGPGEGRCRIRER 216
TPRAPSAPRPTAHLGFVNSGRESLGPGEGRCRIRER
Sbjct: 181 TPRAPSAPRPTAHLGFVNSGRESLGPGEGRCRIRER 216
>gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo
sapiens]
Length = 216
Score = 440 bits (1132), Expect = e-124
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ 60
MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ
Sbjct: 1 MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ 60
Query: 61 AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK 120
AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK
Sbjct: 61 AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK 120
Query: 121 LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAAC 180
LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAAC
Sbjct: 121 LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAAC 180
Query: 181 TPRAPSAPRPTAHLGFVNSGRESLGPGEGRCRIRER 216
TPRAPSAPRPTAHLGFVNSGRESLGPGEGRCRIRER
Sbjct: 181 TPRAPSAPRPTAHLGFVNSGRESLGPGEGRCRIRER 216
>gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 358 bits (920), Expect = 1e-99
Identities = 180/190 (94%), Positives = 180/190 (94%), Gaps = 4/190 (2%)
Query: 1 MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ 60
MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ
Sbjct: 1 MPSLVSMQVLVPDGSESHFPFWTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQ 60
Query: 61 AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK 120
AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK
Sbjct: 61 AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRK 120
Query: 121 LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAAC 180
LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGA A
Sbjct: 121 LTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGA----APL 176
Query: 181 TPRAPSAPRP 190
P AP AP P
Sbjct: 177 APPAPHAPPP 186
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 51.6 bits (122), Expect = 5e-07
Identities = 46/148 (31%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 49 GAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPC----SARAATAAVSRG 104
G+ +A VQ R + P RGAP+A PP P A A AA +R
Sbjct: 89 GSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA 148
Query: 105 PRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREG 164
PRA ++A + P P P + G +A+ L P P P APP G
Sbjct: 149 PRAAAAAATAPPSP----GPAQPGPRAQRAAPLAAPPP-APAAPPAVAPPA--------G 195
Query: 165 PSRPAPTGARALGAACTPRAPSAPRPTA 192
P R P AA P P P+P A
Sbjct: 196 PRRAPPPAV----AAREPPLPPPPQPPA 219
Score = 37.7 bits (86), Expect = 0.007
Identities = 40/150 (26%), Positives = 52/150 (34%), Gaps = 35/150 (23%)
Query: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVS 102
P P AAP + RA AA+ + PG P +P
Sbjct: 136 PPAPVAAAAPARAPRAAAAAATAPPSPG-----------------PAQP----------- 167
Query: 103 RGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRR 162
GPRA+ +A P P P A + P + RE PL PP A ++
Sbjct: 168 -GPRAQRAAPLAAPPPAPAAPP---AVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQ 223
Query: 163 EGPSRPAPTGARALGAACTPRAPSAPRPTA 192
+ P P P GA RA A RP +
Sbjct: 224 QQPPPPQPQPPPEGGAV---RAGGAARPVS 250
>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 47.0 bits (110), Expect = 1e-05
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 39 SASRPALPSVGAAP--TSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARA 96
S R LP+V + T S ++ RS+ + GS+ LR RP + +
Sbjct: 122 SPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGK--------RPSNMKR 173
Query: 97 ATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGN 156
+ + P ++S A S PL R T P RG S + PTP+ R + AP +
Sbjct: 174 ESPTCNLFPASKSPASS--PLTRS-TPPVRGRAGPSGRAAASPPTPI----RSVLAPQPS 226
Query: 157 CARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLGPGEG 209
+ S+R P P GA A ++ P + PRP + + + S+ PG G
Sbjct: 227 TSNSQR----LPRPQGAAAKSSSQLPIPSAIPRPASRMPLTS---RSVPPGRG 272
Score = 32.0 bits (71), Expect = 0.41
Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 39 SASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAAT 98
S S + P + P RA + +++ P I ++ + PRP A A +
Sbjct: 184 SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKS 243
Query: 99 AAVSRGPRARSSACSRLPLPRKLTEPERGG---GAQSQASQLIRPTPLGTRERP------ 149
++ P A SR+PL + P RG + S L RP+ G R R
Sbjct: 244 SSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303
Query: 150 ----LAAPPGNCARSRREGPSR---PAPT 171
L P RS + P + P PT
Sbjct: 304 VSQRLNLPVMGATRSNLQPPRKVAVPGPT 332
>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 47.0 bits (110), Expect = 1e-05
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 39 SASRPALPSVGAAP--TSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARA 96
S R LP+V + T S ++ RS+ + GS+ LR RP + +
Sbjct: 122 SPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGK--------RPSNMKR 173
Query: 97 ATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGN 156
+ + P ++S A S PL R T P RG S + PTP+ R + AP +
Sbjct: 174 ESPTCNLFPASKSPASS--PLTRS-TPPVRGRAGPSGRAAASPPTPI----RSVLAPQPS 226
Query: 157 CARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLGPGEG 209
+ S+R P P GA A ++ P + PRP + + + S+ PG G
Sbjct: 227 TSNSQR----LPRPQGAAAKSSSQLPIPSAIPRPASRMPLTS---RSVPPGRG 272
Score = 32.0 bits (71), Expect = 0.41
Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 39 SASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAAT 98
S S + P + P RA + +++ P I ++ + PRP A A +
Sbjct: 184 SKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKS 243
Query: 99 AAVSRGPRARSSACSRLPLPRKLTEPERGG---GAQSQASQLIRPTPLGTRERP------ 149
++ P A SR+PL + P RG + S L RP+ G R R
Sbjct: 244 SSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303
Query: 150 ----LAAPPGNCARSRREGPSR---PAPT 171
L P RS + P + P PT
Sbjct: 304 VSQRLNLPVMGATRSNLQPPRKVAVPGPT 332
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.9 bits (102), Expect = 1e-04
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 20/171 (11%)
Query: 42 RPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAV 101
+PA P GAA T + A S +A P +++ + P+ALL P AA V
Sbjct: 188 KPAGP--GAAQTLNGSAALLNSHHAAAP-AVSLVNNGPAALL-------PLPKPAAPGTV 237
Query: 102 SRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSR 161
+ P +A P P + P A + A+ P P LA PPG+ A
Sbjct: 238 IQTPPFVGAAAP--PAPAAPSPP----AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291
Query: 162 REGPSRPAPTGAR---ALGAACTPRAPSAPRPTAHLGFVNSGRESLGPGEG 209
P+ P P A+ + GAA P AP+A P G G + P G
Sbjct: 292 TAAPAVPPPAAAQNGGSAGAAPAP-APAAGGPAGVSGQPGPGAAAAAPAPG 341
Score = 33.9 bits (76), Expect = 0.11
Identities = 44/138 (31%), Positives = 49/138 (35%), Gaps = 22/138 (15%)
Query: 89 PRPCSARAATAA------VSRGPRARSSACSRLPL---PRKLTEPERGGGAQSQASQLIR 139
PR RAA A VS P + A P P EP G A+ R
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQR 104
Query: 140 PTPLGTRERPLA----APPGNCARSRREGPS---RPAPTGAR-ALGAACTPRAPSAPRPT 191
P P R RPL APP R EG + P P A A G P P+ P
Sbjct: 105 PGPPSPR-RPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGP 163
Query: 192 AHLGFVNSGRESLGPGEG 209
A L + R GPG G
Sbjct: 164 AAL----AARAGPGPGPG 177
Score = 30.0 bits (66), Expect = 1.6
Identities = 37/142 (26%), Positives = 51/142 (35%), Gaps = 11/142 (7%)
Query: 42 RPALP-SVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAA 100
+PA P +V P A A + + P + A AP+A PP P A A A
Sbjct: 230 KPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAP--AAPAAA-----PPPPPPAPATLAR 282
Query: 101 VSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARS 160
P +A +P P G A + A P + + P AA
Sbjct: 283 PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGV 342
Query: 161 RREGPSR---PAPTGARALGAA 179
+ E P R AP A+ L A+
Sbjct: 343 KAESPKRVVQAAPPAAQTLAAS 364
Score = 28.5 bits (62), Expect = 4.5
Identities = 32/105 (30%), Positives = 36/105 (34%), Gaps = 17/105 (16%)
Query: 93 SARAATAA-----VSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRE 147
S AA+AA R P R++A L P GA A P G
Sbjct: 31 SQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAP---GAAP 87
Query: 148 RPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPTA 192
P PP AR GP RP P R P P+ P P A
Sbjct: 88 EP---PPAGRARPGGGGPQRPGPPSPR------RPLVPAGPAPPA 123
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 43.5 bits (101), Expect = 1e-04
Identities = 48/190 (25%), Positives = 72/190 (37%), Gaps = 18/190 (9%)
Query: 40 ASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATA 99
A AL A +S+ + ++ KP A +PS L R +AA
Sbjct: 487 ARSEALGKEAACESSTPSWASDHNYNAVKPEKTAA--PSPSLLYKSTKEDRRSEEKAAAM 544
Query: 100 AVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTR----ERP--LAAP 153
A S+ SA + P PR L + + A+ I+ P G + +RP A P
Sbjct: 545 AASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWLSATP 604
Query: 154 PGNCARSRREGP--------SRPAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLG 205
+ +R+ GP S+ P A +GA P PS P + G G S
Sbjct: 605 SSGASAARQAGPAPAAATAASKKFPGSAALVGAVRKPVVPSVPMASPAPG--RLGAMSAA 662
Query: 206 PGEGRCRIRE 215
P + +IR+
Sbjct: 663 PSQPNSQIRQ 672
Score = 29.3 bits (64), Expect = 2.7
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 20/133 (15%)
Query: 39 SASRPA-LPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAA 97
SA +PA LP A+ S+ R + A R +A+ G E +P SAR A
Sbjct: 1541 SADKPASLPP--ASQASNHRDPRQARRLAAETGE------------GEGEPLSRLSARGA 1586
Query: 98 TAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNC 157
A+ +R + P+P PE A S + +P P G+ + A PG
Sbjct: 1587 QGALPERDASRGGLVGQAPMP----VPEEKEPASSPWASGEKP-PAGSEQDGWKAEPGEG 1641
Query: 158 ARSRREGPSRPAP 170
R G S P
Sbjct: 1642 TRPATVGDSSARP 1654
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 43.5 bits (101), Expect = 1e-04
Identities = 48/190 (25%), Positives = 72/190 (37%), Gaps = 18/190 (9%)
Query: 40 ASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATA 99
A AL A +S+ + ++ KP A +PS L R +AA
Sbjct: 487 ARSEALGKEAACESSTPSWASDHNYNAVKPEKTAA--PSPSLLYKSTKEDRRSEEKAAAM 544
Query: 100 AVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTR----ERP--LAAP 153
A S+ SA + P PR L + + A+ I+ P G + +RP A P
Sbjct: 545 AASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWLSATP 604
Query: 154 PGNCARSRREGP--------SRPAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLG 205
+ +R+ GP S+ P A +GA P PS P + G G S
Sbjct: 605 SSGASAARQAGPAPAAATAASKKFPGSAALVGAVRKPVVPSVPMASPAPG--RLGAMSAA 662
Query: 206 PGEGRCRIRE 215
P + +IR+
Sbjct: 663 PSQPNSQIRQ 672
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 43.5 bits (101), Expect = 1e-04
Identities = 54/187 (28%), Positives = 72/187 (38%), Gaps = 24/187 (12%)
Query: 22 WTFMCMFSLPQNMAIWGSASRPALPSVGAAPTSSARAVQAASRSSAK--PGSIATLRGAP 79
W +C + ++ A S P LP P +S + + S+K P +A+ +
Sbjct: 1312 WFIIC--PVAEHPAPEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQ--- 1366
Query: 80 SALLCEWDPPRPCSARAATAAVSRGP------RARSSACSRLPLPRKLTEPERGGGAQSQ 133
LL + P P A A A S P + A S +P P T + GG Q
Sbjct: 1367 --LLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQ 1424
Query: 134 A--SQLIRPTPLG-TRERPLAAPPGNCARSRREGPSRPAPTGA--RALGAACTPRAPSAP 188
S+L PL T E PLA P + P PAP A R A P P AP
Sbjct: 1425 GLTSELETSQPLAETHEAPLAVQPLVVGLA----PCTPAPEAASTRDASAPREPLPPPAP 1480
Query: 189 RPTAHLG 195
P+ H G
Sbjct: 1481 EPSPHSG 1487
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 43.5 bits (101), Expect = 1e-04
Identities = 49/162 (30%), Positives = 65/162 (40%), Gaps = 19/162 (11%)
Query: 40 ASRPALPSVGAA--PTSSARAVQAASRSSAKPGSIATL--RGAPSALLCEWDPPRPCSAR 95
A+ P P G A P A AA+ S K G +AT +GAP+ + PP P
Sbjct: 1245 AATPPSPKGGPATPPPKGAPTPPAATPPSLK-GGLATPPHKGAPNPAVVT--PPSPKGGP 1301
Query: 96 AATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPP- 154
A + +G +A P T P +G + P+P GT P P
Sbjct: 1302 ATSPP--KGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTP---PSPKGTPTLPATTPSS 1356
Query: 155 --GNCARSRREGPSRPAPTGARALGAACTP----RAPSAPRP 190
G S +EGP+ PA T + G A TP R P+ P P
Sbjct: 1357 KGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP 1398
Score = 43.1 bits (100), Expect = 2e-04
Identities = 42/151 (27%), Positives = 56/151 (37%), Gaps = 26/151 (17%)
Query: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVS 102
PA P+ AP A+ S S K + +G P++ P P A AA
Sbjct: 900 PATPAPKQAP-----ALSMTSSSPKKARATPAPKGIPAS-------PSPKGAPTPPAATP 947
Query: 103 RGPRARSSACSR--LPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARS 160
P+ + S P P T P GG + P+P G P A PP S
Sbjct: 948 PSPKGGPATPSPKWAPTPPAATPPSPKGGPAT-------PSPKGAPTPPAATPP-----S 995
Query: 161 RREGPSRPAPTGARALGAACTPRAPSAPRPT 191
+ GP+ P+P GA A P +P T
Sbjct: 996 PKGGPATPSPKGAPTPPAVTPPSPKGSPAAT 1026
Score = 43.1 bits (100), Expect = 2e-04
Identities = 42/154 (27%), Positives = 51/154 (33%), Gaps = 27/154 (17%)
Query: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVS 102
PA PS APT A + A P +GAP+ PP P + AAT
Sbjct: 977 PATPSPKGAPTPPAATPPSPKGGPATPSP----KGAPTPPAVT--PPSPKGSPAAT---- 1026
Query: 103 RGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPP----GNCA 158
P P+ + P + S P P G P A P G
Sbjct: 1027 -------------PFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPAT 1073
Query: 159 RSRREGPSRPAPTGARALGAACTPRAPSAPRPTA 192
S + P+ PA T G TP AP P A
Sbjct: 1074 PSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPA 1107
Score = 42.0 bits (97), Expect = 4e-04
Identities = 50/170 (29%), Positives = 61/170 (35%), Gaps = 25/170 (14%)
Query: 40 ASRPALPSVGAA--PTSSARAVQAASRSSAKPGSIATL--RGAPSALLCEWDPPR----- 90
A+ P P G A P A AA+ S K G +AT +GAP+ P+
Sbjct: 1107 AATPPSPKGGLATPPHKGAPTTPAATPPSPK-GGLATPPPKGAPTTPAATPPSPKGGLAT 1165
Query: 91 --PCSARAATAAVSRGPRARSSACSR--LPLPRKLTEPERGGGAQSQASQLIRPTPLGTR 146
P A AA P+ + S P T P GG L P+P G
Sbjct: 1166 PPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG-------LATPSPKGAP 1218
Query: 147 ERPLAAPP----GNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPTA 192
P A PP G S + P+ PA T G TP AP P A
Sbjct: 1219 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPA 1268
Score = 40.4 bits (93), Expect = 0.001
Identities = 50/172 (29%), Positives = 61/172 (35%), Gaps = 26/172 (15%)
Query: 40 ASRPALPSVGAA--PTSSARAVQAASRSSAKPGSIATL--RGAPSALLCEWDPPR----- 90
A+ P P G A P A AA+ S K G +AT +GAP+ P+
Sbjct: 1130 AATPPSPKGGLATPPPKGAPTTPAATPPSPK-GGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Query: 91 --PCSARAATAAVSRGPRARSSACSR--LPLPRKLTEPERGGGAQSQASQLIRPTPLGTR 146
P A AA P+ + S P T P GG L P+P G
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG-------LATPSPKGAP 1241
Query: 147 ERPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVN 198
P A PP S + GP+ P P GA AA P H G N
Sbjct: 1242 TTPAATPP-----SPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPN 1288
Score = 40.0 bits (92), Expect = 0.002
Identities = 46/163 (28%), Positives = 64/163 (39%), Gaps = 24/163 (14%)
Query: 38 GSASRPAL--PSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSAR 95
G+ + PA+ PS +P ++ A++ +A P S +G+P+A P P A
Sbjct: 1007 GAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP---KGSPAAT------PLPKGAP 1057
Query: 96 AATAAVSRGPRARSSACSR--LPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAP 153
AA P+ + S P P T P GG + P+P G P A P
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPAT-------PSPKGAPMPPAATP 1110
Query: 154 P---GNCARSRREG-PSRPAPTGARALGAACTPRAPSAPRPTA 192
P G A +G P+ PA T G TP AP A
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPA 1153
Score = 39.3 bits (90), Expect = 0.003
Identities = 50/189 (26%), Positives = 66/189 (34%), Gaps = 37/189 (19%)
Query: 30 LPQN-MAIWGSASRPAL------PSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSAL 82
LP+N ++ GS PA PS APT SA + + P T PS +
Sbjct: 836 LPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPT----PSVV 891
Query: 83 LCEWDP-----PRPCSARAATAAVSRGPRARSSACSR----------LPLPRKLTEPERG 127
+ P P A A + S +AR++ + P P T P
Sbjct: 892 NLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPK 951
Query: 128 GGAQSQASQLIRPTPLGTRERPLAAPP----GNCARSRREGPSRPAPTGARALGAACTPR 183
GG + P+P P A PP G S + P+ PA T G TP
Sbjct: 952 GGPAT-------PSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPS 1004
Query: 184 APSAPRPTA 192
AP P A
Sbjct: 1005 PKGAPTPPA 1013
Score = 33.9 bits (76), Expect = 0.11
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 18/137 (13%)
Query: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPP--RPCSAR--AAT 98
PA+PS PTS A + ++ A P T GA + + PP P S + AT
Sbjct: 1393 PAIPSPKGDPTSPAVIPLSPKKAPATP---VTREGAATPSKGDLTPPAVTPVSLKKAPAT 1449
Query: 99 AAVSRGPRARSS------ACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAA 152
+A GP SS P P++ P++ + S P P+G P
Sbjct: 1450 SAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVI 1509
Query: 153 PPGNCARSRREGPSRPA 169
P S +E P+ P+
Sbjct: 1510 P-----SSPKEVPATPS 1521
Score = 33.9 bits (76), Expect = 0.11
Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 3/133 (2%)
Query: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEW---DPPRPCSARAATA 99
P LP+V + A ++ R P + + P+ L + P + T
Sbjct: 1503 PTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTP 1562
Query: 100 AVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCAR 159
A+ A ++ S+ P GA S LI P + PP
Sbjct: 1563 AIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPP 1622
Query: 160 SRREGPSRPAPTG 172
S +GP+ PAP G
Sbjct: 1623 SPEKGPATPAPKG 1635
Score = 33.5 bits (75), Expect = 0.14
Identities = 33/145 (22%), Positives = 51/145 (35%), Gaps = 17/145 (11%)
Query: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGA--------------PSALLCEWDP 88
PA P+ PTS + S P S+ GA P+AL
Sbjct: 1628 PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Query: 89 PRPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRER 148
P P S TA +GP+ + S+ + P+ +P G++ S + L ++
Sbjct: 1688 PAPESTPIITAPTRKGPQTKKSSATSPPI---CPDPSAKNGSKGPLSTVAPAPLLPVQKD 1744
Query: 149 PLAAPPGNCARSRREGPSRPAPTGA 173
G A +GP P + A
Sbjct: 1745 SSKTAKGKDASHSPKGPLAPPESKA 1769
Score = 31.2 bits (69), Expect = 0.70
Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 15/167 (8%)
Query: 44 ALPSVG--AAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRP----CSARAA 97
A PS G P + +++ A +SA G AT L PP P + A
Sbjct: 1426 ATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVA 1485
Query: 98 TAAVSRGPRARSSACSRLPLPRKL---------TEPERGGGAQSQASQLIRPTPLGTRER 148
T++ + A + LP + T R A+ L + TP +
Sbjct: 1486 TSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPK 1545
Query: 149 PLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLG 195
PP S ++ P+ P P A A ++ +P A P+ + G
Sbjct: 1546 EALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKG 1592
Score = 29.6 bits (65), Expect = 2.0
Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 7/161 (4%)
Query: 31 PQNMAIWGSASR-PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPP 89
P+ +A S + PA P+ APT A + A P S + LL + P
Sbjct: 1481 PKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPA 1540
Query: 90 RPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERP 149
A P + + +P P++ P ++ + + P+ P
Sbjct: 1541 TLAPKEALIPPAMTVPSPKKTPA--IPTPKEA--PATPSSKEASSPPAVTPSTYKGAPSP 1596
Query: 150 --LAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAP 188
L PP + S +E P+ PA T TP P
Sbjct: 1597 KELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTP 1637
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 43.1 bits (100), Expect = 2e-04
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 38 GSASRPAL-PSVGAA--PTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSA 94
G AS P P VGA P ++ V + S+S + ++ R L C+ P S
Sbjct: 960 GQASSPTPEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASR 1019
Query: 95 RAATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPP 154
A VSRG + AC +P P++ +QSQ + + P PL + P P
Sbjct: 1020 IRAAEKVSRGDQESPDACLPPTVPEAPAPPQKPLNSQSQ--KHLAPPPLLSPLLPSIKP- 1076
Query: 155 GNCARSRREGPSRPAP 170
R R+ S+ AP
Sbjct: 1077 --TVRKTRQDGSQEAP 1090
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 43.1 bits (100), Expect = 2e-04
Identities = 57/190 (30%), Positives = 73/190 (38%), Gaps = 52/190 (27%)
Query: 37 WGSASRPALPSVGAAPTSSARAVQAASRSSAKPGSI----------ATLRGAPSA---LL 83
WGS + P P S++ A AAS S PG I + LR AP+A LL
Sbjct: 29 WGSRAHPN-------PRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPRLL 81
Query: 84 CEWDPPRPCSARAATAAVSRGPRARSSACS---------------RLPLPRKLTEPERGG 128
PR + A G R R++A + R P P +P
Sbjct: 82 -----PRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPR--- 133
Query: 129 GAQSQASQLIRPTPLGTRERPLAAPPGNC--ARSRREGPSRPAPTGARALGAACTPRA-- 184
++ ++ R P T PL PPG A+SR S P P +R G A PR
Sbjct: 134 -SRHPHTRYPRAVPEAT---PLRPPPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDP 189
Query: 185 -PSAPRPTAH 193
P APRP H
Sbjct: 190 RPRAPRPGDH 199
>gi|169171690 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/151 (29%), Positives = 56/151 (37%), Gaps = 18/151 (11%)
Query: 41 SRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAA 100
S P +G +P R ++ RS A+PG P L+ PP P AAT A
Sbjct: 13 SEPLTCPMGVSPAPWGRPLR---RSRARPGPCP-----PEGLVPRAPPPGPRPTAAATRA 64
Query: 101 VSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARS 160
R P R+ P PR+ P + A + L+ P +RP C
Sbjct: 65 TFRVPERRTVP----PCPRRPARPSQPPSAARRERALLANPP----QRPRGDAGALCVSR 116
Query: 161 RREGPSRPAPTGA--RALGAACTPRAPSAPR 189
R R AP GA R G R P PR
Sbjct: 117 PRGACPRRAPAGAPWRLGGEFRKQRPPQQPR 147
>gi|169171833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/151 (29%), Positives = 56/151 (37%), Gaps = 18/151 (11%)
Query: 41 SRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAA 100
S P +G +P R ++ RS A+PG P L+ PP P AAT A
Sbjct: 13 SEPLTCPMGVSPAPWGRPLR---RSRARPGPCP-----PEGLVPRAPPPGPRPTAAATRA 64
Query: 101 VSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARS 160
R P R+ P PR+ P + A + L+ P +RP C
Sbjct: 65 TFRVPERRTVP----PCPRRPARPSQPPSAARRERALLANPP----QRPRGDAGALCVSR 116
Query: 161 RREGPSRPAPTGA--RALGAACTPRAPSAPR 189
R R AP GA R G R P PR
Sbjct: 117 PRGACPRRAPAGAPWRLGGEFRKQRPPQQPR 147
>gi|169171083 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/151 (29%), Positives = 56/151 (37%), Gaps = 18/151 (11%)
Query: 41 SRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAA 100
S P +G +P R ++ RS A+PG P L+ PP P AAT A
Sbjct: 13 SEPLTCPMGVSPAPWGRPLR---RSRARPGPCP-----PEGLVPRAPPPGPRPTAAATRA 64
Query: 101 VSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARS 160
R P R+ P PR+ P + A + L+ P +RP C
Sbjct: 65 TFRVPERRTVP----PCPRRPARPSQPPSAARRERALLANPP----QRPRGDAGALCVSR 116
Query: 161 RREGPSRPAPTGA--RALGAACTPRAPSAPR 189
R R AP GA R G R P PR
Sbjct: 117 PRGACPRRAPAGAPWRLGGEFRKQRPPQQPR 147
>gi|239508966 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/151 (29%), Positives = 56/151 (37%), Gaps = 18/151 (11%)
Query: 41 SRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAA 100
S P +G +P R ++ RS A+PG P L+ PP P AAT A
Sbjct: 13 SEPLTCPMGVSPAPWGRPLR---RSRARPGPCP-----PEGLVPRAPPPGPRPTAAATRA 64
Query: 101 VSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARS 160
R P R+ P PR+ P + A + L+ P +RP C
Sbjct: 65 TFRVPERRTVP----PCPRRPARPSQPPSAARRERALLANPP----QRPRGDAGALCVSR 116
Query: 161 RREGPSRPAPTGA--RALGAACTPRAPSAPR 189
R R AP GA R G R P PR
Sbjct: 117 PRGACPRRAPAGAPWRLGGEFRKQRPPQQPR 147
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 42.4 bits (98), Expect = 3e-04
Identities = 46/157 (29%), Positives = 58/157 (36%), Gaps = 25/157 (15%)
Query: 43 PALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVS 102
PA G +P + A A A S+ G +A W PP S A A
Sbjct: 45 PAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAA----WGPPARASRAAGRRAGP 100
Query: 103 RGP------RARSSACSRLPLPRKL----TEPERGGGAQSQASQLIRPTPLGTRERPLAA 152
GP R R++A R P P ER GGA + +S GTR P
Sbjct: 101 AGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASS-------AGTRSVPARR 153
Query: 153 PPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPR 189
P C + SR R G+A PR+PS+ R
Sbjct: 154 LPPPCGGTSLGAGSR----ALRRPGSAALPRSPSSSR 186
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 42.4 bits (98), Expect = 3e-04
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 42 RPALPSVGAAPTSSARAVQAASRSSAKPGSIAT-----LRGAPSALLCEWDPPRPCSARA 96
R +LP+ A S++ A + + +S A+P S +T PS PP+P S R
Sbjct: 440 RQSLPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRG 499
Query: 97 ATAA----VSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAA 152
TA+ V R A+ S + P + ++ +S A P+P + P A
Sbjct: 500 TTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPS---PTPA 556
Query: 153 PPGNCARSRREGPSRPAPTGARALGAACTPRAPSAP 188
PP ++E P PT A L + P P P
Sbjct: 557 PP------QKEQPPAETPTDAAVLTSPPAPAPPVTP 586
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 42.0 bits (97), Expect = 4e-04
Identities = 45/157 (28%), Positives = 59/157 (37%), Gaps = 5/157 (3%)
Query: 30 LPQNMAIWGSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPP 89
LP A G A S APTSSA Q + + ++AT P+A + PP
Sbjct: 1080 LPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPP 1139
Query: 90 RPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERP 149
P A A A S P A + + + + K P A + I P+G+ E
Sbjct: 1140 AP--ATATPAPTSPFPSATAGSMTYSLVAPKAQRP--SPKAPQKVKAAIASIPVGSFEAG 1195
Query: 150 LAAPPGNCARSRRE-GPSRPAPTGARALGAACTPRAP 185
+ PG R E GP R L TP AP
Sbjct: 1196 ASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAP 1232
Score = 40.4 bits (93), Expect = 0.001
Identities = 52/184 (28%), Positives = 69/184 (37%), Gaps = 33/184 (17%)
Query: 49 GAAPTSSARAVQAASRSSAKPGSI--ATLRGAPSALLCEWDPPRPCSARAATAAVSRGPR 106
G+AP+SSA + ++S S+A S+ T + S P RP A GP
Sbjct: 529 GSAPSSSASSPASSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAG------GPA 582
Query: 107 ARSSACSRLPLPR---KLTEPERGGGAQSQASQLIRPTPLGTRE--RPLAAPPGNCARSR 161
S A LP+ + PE GG + +I P G + L PP +
Sbjct: 583 TPSKATRFLPMDPATFRRKRPESVGGLEPPGPSVIAAPPSGGGNILQTLVLPPN---KEE 639
Query: 162 REG-----PSRPAPTGARALGAACTPR------------APSAPRPTAHLGFVNSGRESL 204
+EG PS PAP+ A AA R S P P A F SGR
Sbjct: 640 QEGGGARVPSAPAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEA 699
Query: 205 GPGE 208
P +
Sbjct: 700 SPND 703
Score = 28.1 bits (61), Expect = 5.9
Identities = 39/161 (24%), Positives = 58/161 (36%), Gaps = 20/161 (12%)
Query: 48 VGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRA 107
VG+ ++ A R +PG + S L + PP P P A
Sbjct: 1189 VGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWT-----PTA 1243
Query: 108 RSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSR 167
RSS PLP E G ++ AS+ P + + + PG +R E P+
Sbjct: 1244 RSSP----PLPPPAEERTSAKGPETMASKF----PSSSSDWRV---PGQGLENRGEPPTP 1292
Query: 168 PAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLGPGE 208
P+P A A+ P S G +E+ G G+
Sbjct: 1293 PSPAPAPAV----APGGSSESSSGRAAGDTPERKEAAGTGK 1329
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 41.6 bits (96), Expect = 5e-04
Identities = 57/191 (29%), Positives = 72/191 (37%), Gaps = 27/191 (14%)
Query: 40 ASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATA 99
A P LP+ PT AR + A+ ++ G A L P + P + R A+
Sbjct: 42 APPPILPAPQRPPTR-AREWEGAAWAAGATGVGAALLALPGSRRLG---RVPLTFREASP 97
Query: 100 AVSRG-PRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLA----APP 154
+ G PRAR S C R P PR+ P G + A++ P R+R LA
Sbjct: 98 GPAPGAPRARGS-CGREPGPRRRRAPSSAGKRPAAAARAAPP-----RQRSLARCLPRSV 151
Query: 155 GNCARSRREGPSRPAPTGARALGAAC-----------TPRAPSAPRPTAHLGFVNSGRES 203
G+C R GPS P R C PR SA P S S
Sbjct: 152 GSCVRP-SVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSRAPS 210
Query: 204 LGPGEGRCRIR 214
L P RCR R
Sbjct: 211 LSPFPRRCRRR 221
>gi|239748995 PREDICTED: hypothetical protein XP_002346877 [Homo
sapiens]
Length = 326
Score = 41.6 bits (96), Expect = 5e-04
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 14/160 (8%)
Query: 40 ASRPALPSVGAAPTSSARAVQAAS----RSSAKPGSIA--TLRGAPSALLCEWDPPRPCS 93
A PA A + S + + +A R +AK ++A T + +P AL D PRP
Sbjct: 172 AQSPAEADAAARASKSLKLLSSALPPHLRPAAKTRAVAGPTAKESPPALRTVGDGPRPGP 231
Query: 94 ARAATAAVSRGPRARSSACSRLPLPRKLTEP---ERGGGAQSQASQLIRPTPLGTRERPL 150
R A P + A PLP +L E GGG A ++ P +RE+
Sbjct: 232 KRPDPAPSRLPPPPHAGALRGPPLPHRLRRSHFREVGGGC---ADSVVLAEP--SREQAH 286
Query: 151 AAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRP 190
AAPP R GP+ P + P S+P P
Sbjct: 287 AAPPAWRTRVPGAGPAPPLGLPSLLCADPHRPAFGSSPLP 326
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 41.2 bits (95), Expect = 7e-04
Identities = 44/141 (31%), Positives = 58/141 (41%), Gaps = 16/141 (11%)
Query: 56 ARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRL 115
AR+ QAA S A PG+ L G P L PP S ++ + + P S +
Sbjct: 933 ARSPQAAQPSPAPPGARGGL-GLPEHFLPP--PPSSRSPSSSPGQLGQPPGELSLGLATG 989
Query: 116 PL------PRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPA 169
PL PR+ P GA AS P+G R +PPG+ R PS P
Sbjct: 990 PLSTPETPPRQPEPPSLVAGASGGAS------PVGFTPRGGLSPPGHSPGPPRTFPSAP- 1042
Query: 170 PTGARALGAACTPRAPSAPRP 190
P + + G+ P A S P P
Sbjct: 1043 PRASGSHGSLLLPPASSPPPP 1063
Score = 35.4 bits (80), Expect = 0.037
Identities = 48/171 (28%), Positives = 64/171 (37%), Gaps = 27/171 (15%)
Query: 38 GSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAA 97
GSAS + PS P+SS+ +Q + SA G L + S+ PP C + +A
Sbjct: 838 GSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSS-----PPPGACGSPSA 892
Query: 98 TAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNC 157
P A +A + GG S S L+ P G R P AA P
Sbjct: 893 PT-----PSAGVAATTIAGFGH--FHKALGGSLSSSDSPLLTPLQPGARS-PQAAQPS-- 942
Query: 158 ARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVNSGRESLGPGE 208
PAP GAR G P P P++ + G+ PGE
Sbjct: 943 ----------PAPPGAR--GGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGE 981
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 41.2 bits (95), Expect = 7e-04
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Query: 79 PSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLI 138
P+ ++ D RP A A A P A + PR+ + +GGG AS L
Sbjct: 38 PALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPL- 96
Query: 139 RPTPLGTRERPL--AAP-----PGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPT 191
P L R P AAP P + PS P PT +L A P+ P +P P+
Sbjct: 97 -PPALQPRGAPAVPAAPSPGPLPARPSSPPPSPPSPPVPTAQSSLPAPWPPQGPRSPAPS 155
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 40.8 bits (94), Expect = 9e-04
Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 89 PRPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTR-E 147
PR C+A AA A P + A S LP L +P G + Q + ++P P
Sbjct: 134 PRGCAAAAAAGA----PAGGAGALSELPGCAAL-QPPHGAPHRGQPLEPLQPGPAPLPLP 188
Query: 148 RPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGF 196
P AP C R R + AP GA AA +P A +P P + GF
Sbjct: 189 LPPPAPAALCPRDPRAPAACSAPPGAAPPAAAASPPA--SPAPASSPGF 235
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.4 bits (93), Expect = 0.001
Identities = 48/166 (28%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 31 PQNMAIWGSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPR 90
P+ A+ A R + PT + A RS A + R APSA PR
Sbjct: 151 PKRSALSAGARRDT-----SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR------PR 199
Query: 91 PCSARAATAAVSRGPRARSSACSRL----PLPRKLTEPERGGGAQSQASQLI--RPTPLG 144
P + GPR S+ S P P P GGG Q AS+ + TPL
Sbjct: 200 P---------PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS 250
Query: 145 TRERPLAAPPGNCARSRREGPSRPAPTGARAL--GAACTPRAPSAP 188
+ R + P PS+P P G +AL PR +AP
Sbjct: 251 SPAR--SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 294
Score = 33.9 bits (76), Expect = 0.11
Identities = 45/148 (30%), Positives = 56/148 (37%), Gaps = 11/148 (7%)
Query: 42 RPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAV 101
RP P AA R + AA KP +A G PR R+A +
Sbjct: 34 RPPPPVTPAA----LRVLGAAGAVGRKP--LAERAGGIGGATIPESAPRAGPTRSAGTS- 86
Query: 102 SRGPRARSSACSR--LPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCAR 159
SR P +R A R P K T P + +AS RP PLG + ++A
Sbjct: 87 SRNPASRPPASGRGERAPPAKNTSPGPVS-SPGRASGTTRPGPLGQKGLRISAEETVARG 145
Query: 160 SRREGPSRPA-PTGARALGAACTPRAPS 186
E P R A GAR + TP PS
Sbjct: 146 KATEAPKRSALSAGARRDTSGPTPGTPS 173
Score = 29.3 bits (64), Expect = 2.7
Identities = 48/185 (25%), Positives = 67/185 (36%), Gaps = 28/185 (15%)
Query: 44 ALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSR 103
A P + P+ A A R PG ++ G L PP P S R+ ++ +S
Sbjct: 567 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS-RSPSSTLS- 624
Query: 104 GPRARSSACSRLPLPRKLTEPERG--GGAQSQA---SQLIRPTPLGTRERPLAAPPGNCA 158
GP + S P +L + G GGA + ++L P P APP
Sbjct: 625 GPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP--APP---- 678
Query: 159 RSRREGPSRPAP----TGARALGAACT----------PRAPSAPRPTAHLGFVNSGRESL 204
+ R P P P TG + CT AP A P G + G+ +
Sbjct: 679 LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG-TSGGKAAA 737
Query: 205 GPGEG 209
G G G
Sbjct: 738 GAGAG 742
Score = 28.1 bits (61), Expect = 5.9
Identities = 43/161 (26%), Positives = 58/161 (36%), Gaps = 16/161 (9%)
Query: 44 ALPSVGAAPTSSARAVQA--ASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAV 101
ALP + A P+ A + A+ S P ++A L + PP P A +
Sbjct: 401 ALPPLQAPPSPPASPPLSPLATPSPQAPNALAV-----HLLQAPFSPP-PSPPVQAPFSP 454
Query: 102 SRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRP--TPLGTRERPLAAPPGNCAR 159
P SA P L P AS + P TP PLAAPP A+
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 160 SRREGPSRPAPTGARALGA------ACTPRAPSAPRPTAHL 194
+ P A +AL + P +PSA P + L
Sbjct: 515 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPL 555
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.4 bits (93), Expect = 0.001
Identities = 48/166 (28%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 31 PQNMAIWGSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPR 90
P+ A+ A R + PT + A RS A + R APSA PR
Sbjct: 151 PKRSALSAGARRDT-----SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR------PR 199
Query: 91 PCSARAATAAVSRGPRARSSACSRL----PLPRKLTEPERGGGAQSQASQLI--RPTPLG 144
P + GPR S+ S P P P GGG Q AS+ + TPL
Sbjct: 200 P---------PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS 250
Query: 145 TRERPLAAPPGNCARSRREGPSRPAPTGARAL--GAACTPRAPSAP 188
+ R + P PS+P P G +AL PR +AP
Sbjct: 251 SPAR--SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 294
Score = 33.9 bits (76), Expect = 0.11
Identities = 45/148 (30%), Positives = 56/148 (37%), Gaps = 11/148 (7%)
Query: 42 RPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAV 101
RP P AA R + AA KP +A G PR R+A +
Sbjct: 34 RPPPPVTPAA----LRVLGAAGAVGRKP--LAERAGGIGGATIPESAPRAGPTRSAGTS- 86
Query: 102 SRGPRARSSACSR--LPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCAR 159
SR P +R A R P K T P + +AS RP PLG + ++A
Sbjct: 87 SRNPASRPPASGRGERAPPAKNTSPGPVS-SPGRASGTTRPGPLGQKGLRISAEETVARG 145
Query: 160 SRREGPSRPA-PTGARALGAACTPRAPS 186
E P R A GAR + TP PS
Sbjct: 146 KATEAPKRSALSAGARRDTSGPTPGTPS 173
Score = 31.6 bits (70), Expect = 0.54
Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 1/151 (0%)
Query: 38 GSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAA 97
G RPA S+ ++ T + ++ + P + A L PP+ R
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRK- 290
Query: 98 TAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNC 157
AA + GP + S + P K A + + P+P PLA P +
Sbjct: 291 DAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSA 350
Query: 158 ARSRREGPSRPAPTGARALGAACTPRAPSAP 188
S + PS PA ++A + TP + P
Sbjct: 351 PPSLQTLPSPPATPPSQAPPSMTTPPMQAPP 381
Score = 29.3 bits (64), Expect = 2.7
Identities = 48/185 (25%), Positives = 67/185 (36%), Gaps = 28/185 (15%)
Query: 44 ALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSR 103
A P + P+ A A R PG ++ G L PP P S R+ ++ +S
Sbjct: 836 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS-RSPSSTLS- 893
Query: 104 GPRARSSACSRLPLPRKLTEPERG--GGAQSQA---SQLIRPTPLGTRERPLAAPPGNCA 158
GP + S P +L + G GGA + ++L P P APP
Sbjct: 894 GPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP--APP---- 947
Query: 159 RSRREGPSRPAP----TGARALGAACT----------PRAPSAPRPTAHLGFVNSGRESL 204
+ R P P P TG + CT AP A P G + G+ +
Sbjct: 948 LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG-TSGGKAAA 1006
Query: 205 GPGEG 209
G G G
Sbjct: 1007 GAGAG 1011
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.4 bits (93), Expect = 0.001
Identities = 48/166 (28%), Positives = 62/166 (37%), Gaps = 30/166 (18%)
Query: 31 PQNMAIWGSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPR 90
P+ A+ A R + PT + A RS A + R APSA PR
Sbjct: 142 PKRSALSAGARRDT-----SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR------PR 190
Query: 91 PCSARAATAAVSRGPRARSSACSRL----PLPRKLTEPERGGGAQSQASQLI--RPTPLG 144
P + GPR S+ S P P P GGG Q AS+ + TPL
Sbjct: 191 P---------PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS 241
Query: 145 TRERPLAAPPGNCARSRREGPSRPAPTGARAL--GAACTPRAPSAP 188
+ R + P PS+P P G +AL PR +AP
Sbjct: 242 SPAR--SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAP 285
Score = 29.3 bits (64), Expect = 2.7
Identities = 48/185 (25%), Positives = 67/185 (36%), Gaps = 28/185 (15%)
Query: 44 ALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSR 103
A P + P+ A A R PG ++ G L PP P S R+ ++ +S
Sbjct: 528 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS-RSPSSTLS- 585
Query: 104 GPRARSSACSRLPLPRKLTEPERG--GGAQSQA---SQLIRPTPLGTRERPLAAPPGNCA 158
GP + S P +L + G GGA + ++L P P APP
Sbjct: 586 GPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP--APP---- 639
Query: 159 RSRREGPSRPAP----TGARALGAACT----------PRAPSAPRPTAHLGFVNSGRESL 204
+ R P P P TG + CT AP A P G + G+ +
Sbjct: 640 LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG-TSGGKAAA 698
Query: 205 GPGEG 209
G G G
Sbjct: 699 GAGAG 703
Score = 28.9 bits (63), Expect = 3.5
Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 95 RAATAAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPP 154
RA SR P S R P P K T P + +AS RP PLG + ++A
Sbjct: 76 RAGPTRTSRPPA--SGRGERAP-PAKNTSPGPVS-SPGRASGTTRPGPLGQKGLRISAEE 131
Query: 155 GNCARSRREGPSRPA-PTGARALGAACTPRAPS 186
E P R A GAR + TP PS
Sbjct: 132 TVARGKATEAPKRSALSAGARRDTSGPTPGTPS 164
Score = 28.1 bits (61), Expect = 5.9
Identities = 43/161 (26%), Positives = 58/161 (36%), Gaps = 16/161 (9%)
Query: 44 ALPSVGAAPTSSARAVQA--ASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAV 101
ALP + A P+ A + A+ S P ++A L + PP P A +
Sbjct: 362 ALPPLQAPPSPPASPPLSPLATPSPQAPNALAV-----HLLQAPFSPP-PSPPVQAPFSP 415
Query: 102 SRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRP--TPLGTRERPLAAPPGNCAR 159
P SA P L P AS + P TP PLAAPP A+
Sbjct: 416 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 475
Query: 160 SRREGPSRPAPTGARALGA------ACTPRAPSAPRPTAHL 194
+ P A +AL + P +PSA P + L
Sbjct: 476 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPL 516
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 40.0 bits (92), Expect = 0.002
Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 88 PPRPCSARAATAAVSRGPR-ARSSAC---SRLPLPRKLTEPER---GGGAQSQASQLIRP 140
P P SA+ +A RG +RS C +L T R G S+A + RP
Sbjct: 53 PRAPGSAQPISAPEGRGGAGSRSRYCHGDGKLAAAAAGTVGPRWLPAGQCLSEAERPRRP 112
Query: 141 TPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAP--SAPRP 190
P G R RP+AA P +R+R S P G+ A P P +APRP
Sbjct: 113 EPGGARSRPVAASPAASSRARSRPESSPGAPGSSV--PALLPSLPPLAAPRP 162
Score = 33.1 bits (74), Expect = 0.18
Identities = 32/91 (35%), Positives = 38/91 (41%), Gaps = 22/91 (24%)
Query: 38 GSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDP---PRPCSA 94
G+ SRP V A+P +S+RA S PGS + ALL P PRP SA
Sbjct: 116 GARSRP----VAASPAASSRARSRPESSPGAPGS------SVPALLPSLPPLAAPRPLSA 165
Query: 95 R---------AATAAVSRGPRARSSACSRLP 116
R V GPRA + SR P
Sbjct: 166 RPRLRPPQPQPLALTVGNGPRAPPAGGSRQP 196
Score = 32.3 bits (72), Expect = 0.31
Identities = 38/138 (27%), Positives = 47/138 (34%), Gaps = 11/138 (7%)
Query: 61 AASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSR--GPRARSSACSRLPLP 118
A SRS G A + W P C + A G R+R A S
Sbjct: 71 AGSRSRYCHGDGKLAAAAAGTVGPRWLPAGQCLSEAERPRRPEPGGARSRPVAASPAASS 130
Query: 119 RKLTEPERGGGAQSQA--------SQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAP 170
R + PE GA + L P PL R R P A + GP P
Sbjct: 131 RARSRPESSPGAPGSSVPALLPSLPPLAAPRPLSARPRLRPPQPQPLALTVGNGPRAPPA 190
Query: 171 TGAR-ALGAACTPRAPSA 187
G+R G+ PRA +A
Sbjct: 191 GGSRQPRGSVRGPRARAA 208
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 39.7 bits (91), Expect = 0.002
Identities = 49/177 (27%), Positives = 68/177 (38%), Gaps = 24/177 (13%)
Query: 39 SASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATLRGAPSALLCEWDPPRPCSARAAT 98
S+S + ++G P VQ +R+ +AT +G PP P RAA
Sbjct: 10 SSSSLSRETIGVQPGWGGEEVQGLARAG-----LATGKGQR--------PPGPGRVRAAQ 56
Query: 99 AAVSRGPRARSSACSRLPLPRKLTEPERGGGAQSQASQLIRPTPLGTRERPLAAPPGNCA 158
A RG AR PR RGG ++A+ + P G E P P +
Sbjct: 57 ARARRGGGARERPAEGARGPR----AARGG---ARAAPMPSSAPRGPTE-PALRRPSSAE 108
Query: 159 RSRREGPSRPAPTGARALGAACTPRAPS--APRPTAHLGFVNSGRESLGPGEGRCRI 213
R + PS A G RA GA +P S +P G + + P E R R+
Sbjct: 109 RPLAQAPSSSASVG-RAPGAMASPSRSSEATGKPRGRDGRPRREEDDVPPEEKRLRL 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.129 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,804,781
Number of Sequences: 37866
Number of extensions: 651073
Number of successful extensions: 5535
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 715
Number of HSP's that attempted gapping in prelim test: 4578
Number of HSP's gapped (non-prelim): 1555
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.