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Search of human proteins with 239746363
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo
sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo ... 377 e-105
gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo ... 369 e-102
gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo ... 369 e-102
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 49 3e-06
gi|171543895 ataxin 2 [Homo sapiens] 48 4e-06
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 47 7e-06
gi|153792074 proline rich 12 [Homo sapiens] 46 1e-05
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 44 6e-05
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 44 6e-05
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 44 6e-05
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 44 7e-05
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 44 1e-04
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 44 1e-04
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 43 1e-04
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 43 2e-04
gi|4557595 forkhead box F2 [Homo sapiens] 43 2e-04
gi|47132620 keratin 2 [Homo sapiens] 42 3e-04
gi|40288197 GATA binding protein 6 [Homo sapiens] 42 4e-04
gi|109255251 loricrin [Homo sapiens] 41 5e-04
gi|33620755 YEATS domain containing 2 [Homo sapiens] 41 5e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 41 6e-04
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 41 6e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|84570137 homeobox B3 [Homo sapiens] 40 8e-04
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 40 0.001
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 40 0.001
gi|4758410 fragile X mental retardation syndrome related protein... 40 0.001
gi|110815800 WD repeat domain 32 [Homo sapiens] 39 0.002
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
>gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo
sapiens]
Length = 179
Score = 377 bits (968), Expect = e-105
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG
Sbjct: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
Query: 61 SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS 120
SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS
Sbjct: 61 SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS 120
Query: 121 GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFPFFVF 179
GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFPFFVF
Sbjct: 121 GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFPFFVF 179
>gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo
sapiens]
Length = 330
Score = 369 bits (946), Expect = e-102
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG
Sbjct: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
Query: 61 SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS 120
SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS
Sbjct: 61 SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS 120
Query: 121 GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFP 175
GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFP
Sbjct: 121 GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFP 175
>gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo
sapiens]
Length = 330
Score = 369 bits (946), Expect = e-102
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG
Sbjct: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
Query: 61 SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS 120
SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS
Sbjct: 61 SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPS 120
Query: 121 GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFP 175
GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFP
Sbjct: 121 GAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGRFP 175
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 48.5 bits (114), Expect = 3e-06
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 2 TSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGS 61
+S SS S+ + S+S ++++S ++S + S++SS + +DSS S
Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCS 2680
Query: 62 AGEGAADCGTAGGGGERGAPAGGARGSGGGPP----PWRLRNEVSPKASPPRPTCSVCRK 117
+ + AA TAG + P + +G P P + P+A PP+PT + K
Sbjct: 2681 SDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPPQPTQPLQPK 2740
Query: 118 SPSGAEMDRAPRSG 131
+ +GA+ R G
Sbjct: 2741 AQAGAKSRPKKREG 2754
Score = 35.4 bits (80), Expect = 0.026
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 19/85 (22%)
Query: 60 GSAGEGAADCGTAGGGGERGAPAGGAR----------GSGGGPPPW------RLRNEVSP 103
GS A T GGG GAPA G+ G GG PPP R R E
Sbjct: 174 GSLHSHAPSARTPGGGHSSGAPAKGSSSRDGPAKERAGRGGEPPPLFGKKDPRARGE--- 230
Query: 104 KASPPRPTCSVCRKSPSGAEMDRAP 128
+AS PR + +++ + DR P
Sbjct: 231 EASGPRGVVDLTQEARAEGRQDRGP 255
Score = 30.8 bits (68), Expect = 0.65
Identities = 35/144 (24%), Positives = 49/144 (34%), Gaps = 13/144 (9%)
Query: 31 AAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARGSGG 90
A G S + S++SS S SSGS EG + G GG G+GG
Sbjct: 2549 AEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGG---------CGTGG 2599
Query: 91 GPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCAGPSCFSTGICEGH 150
SP +S + S S S + + S + S S+
Sbjct: 2600 RNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2659
Query: 151 GRVSAAPARGSQPRD----CSKDD 170
S++ + S D CS DD
Sbjct: 2660 SSSSSSSSSSSSTTDEDSSCSSDD 2683
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 48.1 bits (113), Expect = 4e-06
Identities = 49/143 (34%), Positives = 55/143 (38%), Gaps = 13/143 (9%)
Query: 5 SSRSALGRQRAWGGCV-PGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAG 63
S R A R W P R S G AA G PS A GP S S+
Sbjct: 17 SRRFAAARWPGWRSLQRPARRSGRGGGGAAPGPY----PSAAPPPPGPGP--PPSRQSSP 70
Query: 64 EGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAE 123
A+DC + G G G R G G PP + P ASP P + R SP GA
Sbjct: 71 PSASDCFGSNGNGGGAFRPGSRRLLGLGGPPRPFVVLLLPLASPGAPPAAPTRASPLGAR 130
Query: 124 MDRAPRSGRFL-----GCAGPSC 141
PRSG L GC P+C
Sbjct: 131 AS-PPRSGVSLARPAPGCPRPAC 152
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 47.4 bits (111), Expect = 7e-06
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 22 GRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADC-----GTAGGGG 76
GRGS G + G ++ + S EG SR S G G C GTAGG G
Sbjct: 498 GRGSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAGGHG 557
Query: 77 ERGAPA-GGARGSGGGPPP 94
G GG GSGGG P
Sbjct: 558 SGGGQRPGGGHGSGGGQGP 576
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 46.2 bits (108), Expect = 1e-05
Identities = 48/173 (27%), Positives = 64/173 (36%), Gaps = 20/173 (11%)
Query: 9 ALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSA-GEGAA 67
AL + GG P G + LA + G + S GP +SG A G AA
Sbjct: 309 ALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGASGRATGPEAA 368
Query: 68 DCGTAGGGGERGAPA-------------GGARGSGGGPPPWRLRNEVSPKASP---PRPT 111
G AGGGG P G A G PPP R+ +PK P
Sbjct: 369 GGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPP--PRSTATPKCQSLGGPAAA 426
Query: 112 CSVCRKSPSGAEMDRAPRSGRFLGCAGPSCFSTGICEGHGR-VSAAPARGSQP 163
+ + S +G +A G+ G GP + G G + +S AP+ P
Sbjct: 427 YATGKASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKAPSYSGGP 479
Score = 30.0 bits (66), Expect = 1.1
Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 8/111 (7%)
Query: 4 FSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTA----SSMEGPRS-RWKDS 58
F + G A G G+G S L A G A T ++ P R +
Sbjct: 599 FLAPPGAGSYAAGAGGYKGKGDGSELLAGPGGPPAERTEDEEFLIQHLLQAPSPPRTSGA 658
Query: 59 SGSAGE-GAADC--GTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKAS 106
G GE GAAD G G GG G P + P + L++ + AS
Sbjct: 659 DGLVGEDGAADASKGLGGSGGAGGPPGTPYELAKEDPQRYHLQSVIRTSAS 709
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 44.3 bits (103), Expect = 6e-05
Identities = 26/70 (37%), Positives = 31/70 (44%)
Query: 21 PGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGA 80
PG G +AAA+G SM P S P S+ G + GA G GGGG G+
Sbjct: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGS 262
Query: 81 PAGGARGSGG 90
GG G G
Sbjct: 263 GGGGGGGGAG 272
Score = 29.6 bits (65), Expect = 1.4
Identities = 23/91 (25%), Positives = 34/91 (37%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGG 76
GG G A +AAAA+ AA+ G + + S +G GGGG
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Query: 77 ERGAPAGGARGSGGGPPPWRLRNEVSPKASP 107
A + GG + +N+ A+P
Sbjct: 329 AASLSKAAAGSAAGGFQRFAGQNQHPSGATP 359
Score = 29.3 bits (64), Expect = 1.9
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 22 GRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAP 81
G G +G A +G A+ + A++ G S SAG G GGG P
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS-SAGYGVLSSPRQQGGGMMMGP 324
Query: 82 AGGARGS 88
GG S
Sbjct: 325 GGGGAAS 331
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 44.3 bits (103), Expect = 6e-05
Identities = 26/70 (37%), Positives = 31/70 (44%)
Query: 21 PGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGA 80
PG G +AAA+G SM P S P S+ G + GA G GGGG G+
Sbjct: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGS 262
Query: 81 PAGGARGSGG 90
GG G G
Sbjct: 263 GGGGGGGGAG 272
Score = 29.6 bits (65), Expect = 1.4
Identities = 23/91 (25%), Positives = 34/91 (37%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGG 76
GG G A +AAAA+ AA+ G + + S +G GGGG
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Query: 77 ERGAPAGGARGSGGGPPPWRLRNEVSPKASP 107
A + GG + +N+ A+P
Sbjct: 329 AASLSKAAAGSAAGGFQRFAGQNQHPSGATP 359
Score = 29.3 bits (64), Expect = 1.9
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 22 GRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAP 81
G G +G A +G A+ + A++ G S SAG G GGG P
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS-SAGYGVLSSPRQQGGGMMMGP 324
Query: 82 AGGARGS 88
GG S
Sbjct: 325 GGGGAAS 331
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 44.3 bits (103), Expect = 6e-05
Identities = 26/70 (37%), Positives = 31/70 (44%)
Query: 21 PGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGA 80
PG G +AAA+G SM P S P S+ G + GA G GGGG G+
Sbjct: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGS 262
Query: 81 PAGGARGSGG 90
GG G G
Sbjct: 263 GGGGGGGGAG 272
Score = 29.6 bits (65), Expect = 1.4
Identities = 23/91 (25%), Positives = 34/91 (37%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGG 76
GG G A +AAAA+ AA+ G + + S +G GGGG
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Query: 77 ERGAPAGGARGSGGGPPPWRLRNEVSPKASP 107
A + GG + +N+ A+P
Sbjct: 329 AASLSKAAAGSAAGGFQRFAGQNQHPSGATP 359
Score = 29.3 bits (64), Expect = 1.9
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 22 GRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAP 81
G G +G A +G A+ + A++ G S SAG G GGG P
Sbjct: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS-SAGYGVLSSPRQQGGGMMMGP 324
Query: 82 AGGARGS 88
GG S
Sbjct: 325 GGGGAAS 331
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 43.9 bits (102), Expect = 7e-05
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 59 SGSAGEGAADCGTAGGGGERGAPAGGARGSGGG---PPPWRLRNEVSPKAS-PPRPTCSV 114
+G+ G G A G+ GG G G AGGA G GGG PP L P + P SV
Sbjct: 36 NGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASV 95
Query: 115 CRKSPSGAEMDRAPRSGRFL 134
C +++R GRFL
Sbjct: 96 CETLEETGDIERL---GRFL 112
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 29 LAAAASGRAASMTPS---TASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGA 85
L AAA R A+ P+ T ++++GP + + G G + G GGGG G G
Sbjct: 132 LCAAAEARGAATLPAAAATTTALDGPGAGGGAEAQFLGGGRSSAGGGGGGGGGGGGRGSR 191
Query: 86 RGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCA 137
RG GGG P+A R S R + R R+ G A
Sbjct: 192 RGRGGG-------ERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETRGAA 236
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/109 (29%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 32 AASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARGSGGG 91
AA G A + +T E R + + GE AA G G GA G+ G G
Sbjct: 13 AAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGAEGPGSPGVPGS 72
Query: 92 PPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCAGPS 140
PP + SP + C VC + + A R RFLG P+
Sbjct: 73 PPEAASEPPTGLRFSPEQVAC-VCE---ALLQAGHAGRLSRFLGALPPA 117
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 43.1 bits (100), Expect = 1e-04
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 25 SASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGG 84
S+S L+ AA+ AA+ + A+ R S G+ G G+ GGGG G GG
Sbjct: 449 SSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGG 508
Query: 85 ARGSGGG 91
+ G G G
Sbjct: 509 SSGGGSG 515
Score = 37.4 bits (85), Expect = 0.007
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 25 SASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGG 84
+A+ AAAA+ AA+++ G S G +G G G GGG G +GG
Sbjct: 456 AAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGG---GGSSGG 512
Query: 85 ARGSGGG 91
G+ GG
Sbjct: 513 GSGTAGG 519
Score = 34.3 bits (77), Expect = 0.059
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 23 RGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTA---------G 73
+GS S AA+SG +S P S P+S S +A AA A G
Sbjct: 420 QGSESS-PAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGG 478
Query: 74 GGGERGA--PAGGARGSGGG 91
G G GA +GG GSGGG
Sbjct: 479 GSGSGGAGGGSGGGSGSGGG 498
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 42.7 bits (99), Expect = 2e-04
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 29 LAAAASGRAASMTPS---TASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGA 85
L AAA R A+ P+ T ++++GP + G +G +A G GGGG G G
Sbjct: 132 LCAAAEARGAATLPAAAATTTALDGPGAGGGAERGGSGRSSA--GGGGGGGGGGGGRGSR 189
Query: 86 RGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCA 137
RG GGG P+A R S R + R R+ G A
Sbjct: 190 RGRGGG-------ERGGPRAQAVRRRLSALRGRGRRRRLKRLRRAQETSGAA 234
>gi|4557595 forkhead box F2 [Homo sapiens]
Length = 444
Score = 42.7 bits (99), Expect = 2e-04
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 30 AAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARGSG 89
AAAA+ A T S++SS + SS SA +A C +AGGGG GA +GGA+ +
Sbjct: 34 AAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGG-AGAGSGGAKKAS 92
Query: 90 GG 91
G
Sbjct: 93 SG 94
Score = 28.9 bits (63), Expect = 2.5
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 36 RAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARGSGGG 91
+AA M+P A++ + SS S+ A+ ++ AP+ + +GGG
Sbjct: 24 QAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGG 79
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 42.0 bits (97), Expect = 3e-04
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
+TS + S + + A+GG GRGS+SG ++ + + S G S G
Sbjct: 503 VTSSTISSNVASKAAFGGS-GGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGG 561
Query: 61 SAGEGAADCGT--AGGGGERGAPAGGARGSGGG 91
G G G +GGG + G+ +GG GSGGG
Sbjct: 562 GYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGG 594
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 11 GRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSA--GEGAAD 68
G + G + + S ++ S AS S G S SSGS+ G G
Sbjct: 486 GEECRMSGDLSSNVTVSVTSSTISSNVASKAAFGGSGGRGSSSGGGYSSGSSSYGSGGRQ 545
Query: 69 CGTAGGGGERGAPAGGARGSGGG 91
G+ GG G G+ +GG GSGGG
Sbjct: 546 SGSRGGSGGGGSISGGGYGSGGG 568
Score = 38.5 bits (88), Expect = 0.003
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 5 SSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGE 64
SS + GRQ G G GS SG + G + S S G S G G
Sbjct: 537 SSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGG-----SISGGGYGS 591
Query: 65 GAADCGTAGGGGERGAPAGGARGSGGG 91
G ++GGG G+ +GG GSGGG
Sbjct: 592 GGGK-HSSGGGSRGGSSSGGGYGSGGG 617
Score = 32.7 bits (73), Expect = 0.17
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 3 SFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSA 62
S SS S L R GG G G S G T S + S+ G + + G
Sbjct: 36 STSSFSCLSRHGGGGGGFGGGGFGSRSLVGLGG-----TKSISISVAGGGGGFGAAGGFG 90
Query: 63 GEGAADCGTAGGGGERGAPAGGARGSGGG 91
G G G + GG G GG G G G
Sbjct: 91 GRGGGFGGGSSFGGGSGFSGGGFGGGGFG 119
Score = 32.0 bits (71), Expect = 0.29
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTPSTASSMEGP---RSRWKDSSGSAGEGAADCGTAG 73
GG + G G SG + GR S S S+ G K SSG G + G G
Sbjct: 555 GGSISGGGYGSG--GGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSG--G 610
Query: 74 GGGERGAPAGGARGSGG 90
G G G + +GS G
Sbjct: 611 GYGSGGGGSSSVKGSSG 627
Score = 30.0 bits (66), Expect = 1.1
Identities = 29/89 (32%), Positives = 33/89 (37%), Gaps = 17/89 (19%)
Query: 4 FSSRS--ALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGS 61
F SRS LG ++ V G G G A GR G S + SG
Sbjct: 58 FGSRSLVGLGGTKSISISVAGGGGGFGAAGGFGGRGGGF---------GGGSSFGGGSGF 108
Query: 62 AGEGAADCGTAGGGGERGAPAGGARGSGG 90
+G G GGGG G GG G GG
Sbjct: 109 SGGGF------GGGGFGGGRFGGFGGPGG 131
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASG-------RAASMTPSTASSMEGPRS 53
+ + SS+ A GG V +A+ AAAAS R SM P ++G S
Sbjct: 151 LAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQGSGS 210
Query: 54 RWKDSSGSAG------EGAADCGTAGGGGERGAPAGGARGSGG 90
+ +G AG + +AD G GG GA GGA G GG
Sbjct: 211 GPANHAGGAGAHPGWPQASADSPPYGSGG--GAAGGGAAGPGG 251
Score = 32.0 bits (71), Expect = 0.29
Identities = 32/106 (30%), Positives = 38/106 (35%), Gaps = 30/106 (28%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGE----GAADCGT- 71
G C+P R A+G A+ S + PST S P S S GE GA++CGT
Sbjct: 7 GWCLPKRFGAAGADASDSRAFPAREPSTPPS---PISSSSSSCSRGGERGPGGASNCGTP 63
Query: 72 ------AGG----------------GGERGAPAGGARGSGGGPPPW 95
A G G G A G G GG W
Sbjct: 64 QLDTEAAAGPPARSLLLSSYASHPFGAPHGPSAPGVAGPGGNLSSW 109
Score = 29.6 bits (65), Expect = 1.4
Identities = 32/105 (30%), Positives = 38/105 (36%), Gaps = 33/105 (31%)
Query: 17 GGCVPG-----RGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGT 71
G +PG +GS SG A A G A AS+ P + G+AG GAA G
Sbjct: 195 GSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPP---YGSGGGAAGGGAAGPGG 251
Query: 72 AGG-------------------------GGERGAPAGGARGSGGG 91
AG GG A +GGA G GG
Sbjct: 252 AGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGG 296
Score = 28.9 bits (63), Expect = 2.5
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 15 AWGGCVPGRGSASGLAAAASGRAA-SMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAG 73
A GG G G A AA S R S +P A+ ++ G A G+ G
Sbjct: 241 AAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAA------REPGGYAAAGSGGAGGVS 294
Query: 74 GGGERGAPAGG 84
GGG A GG
Sbjct: 295 GGGSSLAAMGG 305
Score = 28.1 bits (61), Expect = 4.2
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTP-STASSMEGPRSRWKDSSGSAGEGAADCGTAGGG 75
GG G + G A +A+ ++ P S + M +R +AG G A G +GGG
Sbjct: 239 GGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAG-GVSGGG 297
Query: 76 GERGAPAG 83
A G
Sbjct: 298 SSLAAMGG 305
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 41.2 bits (95), Expect = 5e-04
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 17 GGCVPG-RGSASGLAAAASGRAASMTPS----TASSMEGPRSRWKDSSGSAGEGAADCGT 71
GG V G G SG +SG + S S T +S S SSG G G + C +
Sbjct: 183 GGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFS 242
Query: 72 AGGGGERGAPAGGARGSGGG 91
+GGGG GG+ G G G
Sbjct: 243 SGGGGGSSGCGGGSSGIGSG 262
Score = 38.1 bits (87), Expect = 0.004
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGG 76
GG G G G+ G S+ S G S S+G G + C ++GGGG
Sbjct: 65 GGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGS----GCFSSGGGGSGCFSSGGGG 120
Query: 77 ERGAPAGGARGSGGG 91
G +G GGG
Sbjct: 121 SSGGGSGCFSSGGGG 135
Score = 38.1 bits (87), Expect = 0.004
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 17 GGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGG 76
GGC G GS + + G ++ SS G + G + G + C ++GGGG
Sbjct: 78 GGC--GGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGG 135
Query: 77 ERGAPAGGARGSGGG 91
G +G GGG
Sbjct: 136 SSGGGSGCFSSGGGG 150
Score = 35.8 bits (81), Expect = 0.020
Identities = 39/147 (26%), Positives = 53/147 (36%), Gaps = 7/147 (4%)
Query: 5 SSRSALGRQRAWGGCVPGRGSA--SGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSA 62
SS G + GG G GS S SG+A S G S
Sbjct: 121 SSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSG 180
Query: 63 GEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGA 122
G G + CG +GGG G + G GSG + +V+ + P+P+ G+
Sbjct: 181 GGGGSVCGYSGGGSGCGGGSSGGSGSG-----YVSSQQVTQTSCAPQPSYGGGSSGGGGS 235
Query: 123 EMDRAPRSGRFLGCAGPSCFSTGICEG 149
SG G +G S+GI G
Sbjct: 236 GGSGCFSSGGGGGSSGCGGGSSGIGSG 262
Score = 34.3 bits (77), Expect = 0.059
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 60 GSAGEGAADCGTAGGGGERGAPAGGARGSGGG 91
GS+G G CG +GGGG G GG GGG
Sbjct: 45 GSSGSG---CGYSGGGGYSGGGCGGGSSGGGG 73
Score = 33.5 bits (75), Expect = 0.100
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 60 GSAGEGAADCGTAGGGGERGAPAGGARGSGGG 91
G G G CG GGGG G +G G GG
Sbjct: 25 GGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGG 56
Score = 33.5 bits (75), Expect = 0.100
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 19 CVP----GRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGG 74
C P G GS+ G + SG +S +S G S +G G+ G + G
Sbjct: 219 CAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSG 278
Query: 75 GGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPT 111
GG G+ GG+ GSG G P + ++ K +P P+
Sbjct: 279 GGGGGSSVGGS-GSGKGVP---ICHQTQQKQAPTWPS 311
Score = 30.8 bits (68), Expect = 0.65
Identities = 36/136 (26%), Positives = 42/136 (30%), Gaps = 28/136 (20%)
Query: 59 SGSAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKAS---PPRPTCSVC 115
SG G CG GG G GG G GG + S S S C
Sbjct: 54 SGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGC 113
Query: 116 RKSPSGAEMDRAPRSGRFLGC----------AGPSCFSTG---------ICEGHGRVSAA 156
S G SG GC G CFS+G C+ +G VS+
Sbjct: 114 FSSGGGGS------SGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSG 167
Query: 157 PARGSQPRDCSKDDGG 172
+ G S GG
Sbjct: 168 GSSGGGSGCFSSGGGG 183
Score = 30.4 bits (67), Expect = 0.85
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Query: 24 GSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGG------- 76
G SG ++ G + + S G + G + G + C ++GGGG
Sbjct: 98 GGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQ 157
Query: 77 -------ERGAPAGGARG---SGGG 91
G +GG G SGGG
Sbjct: 158 CQSYGGVSSGGSSGGGSGCFSSGGG 182
Score = 30.0 bits (66), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 60 GSAGEGAADCGTAGGGGERGAPAGGARGSGGG 91
G +G G G GGG G GG G GGG
Sbjct: 52 GYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGG 83
Score = 28.5 bits (62), Expect = 3.2
Identities = 21/89 (23%), Positives = 32/89 (35%)
Query: 3 SFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSA 62
S+ S+ G GC G + + G + S+ S G S + + S
Sbjct: 160 SYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSC 219
Query: 63 GEGAADCGTAGGGGERGAPAGGARGSGGG 91
+ G + GGG G + G GGG
Sbjct: 220 APQPSYGGGSSGGGGSGGSGCFSSGGGGG 248
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 41.2 bits (95), Expect = 5e-04
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 58 SSGSAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCS--VC 115
S+ S G GA G GGGG G+ GG+ G GGG ++ P T + +
Sbjct: 795 SAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGGISQHLTYTSYIL 854
Query: 116 RKSPSGAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQ 162
+++P G + P +G + + +G VS + A+G Q
Sbjct: 855 KQTPQGTFLVGQPSP----QTSGKQLTTGSVVQGTLGVSTSSAQGQQ 897
Score = 29.3 bits (64), Expect = 1.9
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 8/67 (11%)
Query: 28 GLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGG--GERGAPAGGA 85
G A+ A + S AS G G G G G+ GGG G G AGG
Sbjct: 780 GAILRATNNANLQSGSAASGGSGA------GGGGGGGGGGGSGSGGGGSTGGGGGTAGGG 833
Query: 86 RGSGGGP 92
S GP
Sbjct: 834 TQSTAGP 840
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.8 bits (94), Expect = 6e-04
Identities = 46/147 (31%), Positives = 57/147 (38%), Gaps = 13/147 (8%)
Query: 27 SGLAAAASGR--AASMTPSTASSMEGPRSRWKDS---SGSAGEG-AADCGTAGGGGERGA 80
S LAA+A+ A TP ++ G S +G+AG G AA A G
Sbjct: 31 SQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPP 90
Query: 81 PAGGARGSGGGP----PPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGC 136
PAG AR GGGP PP R V + P P + R P G+ AP
Sbjct: 91 PAGRARPGGGGPQRPGPPSPRRPLV---PAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVA 147
Query: 137 AGPSCFSTGICEGHGRVSAAPARGSQP 163
AGP G + G + A G P
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGP 174
Score = 30.0 bits (66), Expect = 1.1
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 10/98 (10%)
Query: 66 AADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMD 125
A + G+AG AGG G G P P A+ P V +SP +
Sbjct: 303 AQNGGSAGAAPAPAPAAGGPAGVSGQP---------GPGAAAAAPAPGVKAESPKRV-VQ 352
Query: 126 RAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQP 163
AP + + L +GP+ + + G A P+ + P
Sbjct: 353 AAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVP 390
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 40.8 bits (94), Expect = 6e-04
Identities = 35/106 (33%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 60 GSAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSP 119
GS G G G G G+ APA G RG G G P + P R P
Sbjct: 28 GSPGRGRR--GPRPGPGDEAAPALGRRGKGSGGPEAGADGLSRGERGPRRAAVPELSAQP 85
Query: 120 SGAEMDRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPARG-SQPR 164
+G+ RA +G G G S S+GI G+ + +P G S PR
Sbjct: 86 AGS--PRASLAGSDGGGGGGSARSSGISLGYDQRHGSPRSGRSDPR 129
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 40.4 bits (93), Expect = 8e-04
Identities = 46/164 (28%), Positives = 65/164 (39%), Gaps = 27/164 (16%)
Query: 6 SRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEG 65
+R+AL +R+ PG A G A A SG + P+ AS++ P ++W
Sbjct: 101 ARTALWGRRSRRAAGPGLDCA-GSAPAPSGAQSCGGPAPASALRRPLTQWD--------- 150
Query: 66 AADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPT-CSVCRKSPSGAEM 124
A GGG RG+ +G G+ GG S +A R T S+C
Sbjct: 151 ------ASGGGGRGSHSGPRAGTPGGGR--------SSRAGARRKTPLSLCPLKLRKGSS 196
Query: 125 DRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPA--RGSQPRDC 166
R G G +G + HG + A A RGS+ R C
Sbjct: 197 RRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
Score = 28.5 bits (62), Expect = 3.2
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 10/74 (13%)
Query: 23 RGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPA 82
R A L+ + RAA++ P A P W G C GGG + A
Sbjct: 477 RLGAGRLSCPQAPRAAAL-PGIAVLAPSPAHDW---------GGQRCEGCGGGSQPFAGR 526
Query: 83 GGARGSGGGPPPWR 96
RG G PWR
Sbjct: 527 RAERGKRGAGVPWR 540
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 40.4 bits (93), Expect = 8e-04
Identities = 46/164 (28%), Positives = 65/164 (39%), Gaps = 27/164 (16%)
Query: 6 SRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEG 65
+R+AL +R+ PG A G A A SG + P+ AS++ P ++W
Sbjct: 101 ARTALWGRRSRRAAGPGLDCA-GSAPAPSGAQSCGGPAPASALRRPLTQWD--------- 150
Query: 66 AADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPT-CSVCRKSPSGAEM 124
A GGG RG+ +G G+ GG S +A R T S+C
Sbjct: 151 ------ASGGGGRGSHSGPRAGTPGGGR--------SSRAGARRKTPLSLCPLKLRKGSS 196
Query: 125 DRAPRSGRFLGCAGPSCFSTGICEGHGRVSAAPA--RGSQPRDC 166
R G G +G + HG + A A RGS+ R C
Sbjct: 197 RRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
Score = 28.5 bits (62), Expect = 3.2
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 10/74 (13%)
Query: 23 RGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPA 82
R A L+ + RAA++ P A P W G C GGG + A
Sbjct: 477 RLGAGRLSCPQAPRAAAL-PGIAVLAPSPAHDW---------GGQRCEGCGGGSQPFAGR 526
Query: 83 GGARGSGGGPPPWR 96
RG G PWR
Sbjct: 527 RAERGKRGAGVPWR 540
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 40.4 bits (93), Expect = 8e-04
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 10/115 (8%)
Query: 22 GRGSASGLAAAASGRAASMTPSTASSMEGPR--SRWKDSSGSAGEGAADCGTAGGGGERG 79
G S SG G +++T M+ R S+ K++S EG G GGGG G
Sbjct: 107 GGPSKSGPPKCGPGTNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSG 166
Query: 80 APAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFL 134
GG G GGG + SP S S E+++ R+L
Sbjct: 167 GSGGGGGGGGGG--------DKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYL 213
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 40.0 bits (92), Expect = 0.001
Identities = 37/115 (32%), Positives = 44/115 (38%), Gaps = 22/115 (19%)
Query: 28 GLAAAASGRAASMTPSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARG 87
G A + A S + +T+SS P S ++ G GAA G GG G R A G G
Sbjct: 103 GAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAA-AGAVGGPGSRSAGGAGGTG 161
Query: 88 SGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCA-GPSC 141
+G G P C C P DR R GR GCA P C
Sbjct: 162 TGSG-----------ASCCP----CCCCCGCP-----DRPGRRGRRRGCAPSPRC 196
Score = 28.5 bits (62), Expect = 3.2
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
Query: 26 ASGLAAAASGRAASMTPSTASSMEGPR----SRWKDSSGSAGEGAADCGTAGGGGERGAP 81
A G + S + S P A++ P ++ GS G+ + T+ GGG
Sbjct: 4 ALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGS-GDSSTSTSTSRGGG----- 57
Query: 82 AGGARGSGGGPP 93
GG RG GGG P
Sbjct: 58 -GGRRGGGGGSP 68
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 1 MTSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSG 60
M S +S+ A GG + S L + + G +A + PS +S SS
Sbjct: 3 MMSLNSKQAFSMPH--GGSLHVEPKYSALHSTSPGSSAPIAPSASSP---------SSSS 51
Query: 61 SAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSV 114
+AG G G GGGG R + + + SGGG +E +A P P ++
Sbjct: 52 NAGGGGGGGGGGGGGGGRSSSSSSSGSSGGG------GSEAMRRACLPTPPSNI 99
>gi|4758410 fragile X mental retardation syndrome related protein 2
[Homo sapiens]
Length = 673
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/93 (36%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 2 TSFSSRSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWKDSSGS 61
T SS S+L R +GG GRG A G ++ + STAS E S ++
Sbjct: 411 TDESSSSSLHATRTYGGSYGGRGRGRRTGGPAYGPSSDV--STASETE---SEKREEPNR 465
Query: 62 AGEGAADCGTAGGGGERGAPAGGARGSGGGPPP 94
AG G D T G R P G G G GPPP
Sbjct: 466 AGPGDRDPPTRGEESRR-RPTG---GRGRGPPP 494
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 39.3 bits (90), Expect = 0.002
Identities = 34/104 (32%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 70 GTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPR 129
G+AG G E P G + G P P + + PP P S R P + APR
Sbjct: 13 GSAGAGAEEPTPHEGQAAATGPPSP---LHPGADATHPPPPARSPRR--PGAPSLSPAPR 67
Query: 130 SGRFLGCAGPSCFSTGICEGHGRVSAAPARGSQPRDCSKDDGGR 173
SG LG G ST G + P R P DC GR
Sbjct: 68 SGE-LGLPGAPESSTASAPGEPSPPSPPCRRPGP-DCRAKSRGR 109
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 27/146 (18%)
Query: 7 RSALGRQRAWGGCVPGRGSASGLAAAASGRAASMTPSTASSMEGPRSRWK-----DSSGS 61
+ A G +R GG P R G A+ SG TP A++ +G +SR K + +
Sbjct: 204 KGAAGAKRCGGGKQPRR---RGQKASKSGGVRCQTPQKAAA-QGVKSRKKLRQRGQKAAA 259
Query: 62 AGEGAADCGTAGGGGERGAPAGGARGSGGGPP-----PWRLRNEVSPKASPPRPTCSV-- 114
AG+ AA T GGGGE+ RG G P WR + + P+ +
Sbjct: 260 AGQEAAAGKTCGGGGEK------HRGGGDKKPLRKNSRWRGQKAAAAGGKKPQKAAAAGG 313
Query: 115 -----CRKSPSGAEMDRAPRSGRFLG 135
R+ + ++P+ R+ G
Sbjct: 314 ERRKKLRRQKAAVARAKSPKKPRWRG 339
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,822,969
Number of Sequences: 37866
Number of extensions: 645326
Number of successful extensions: 9407
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 832
Number of HSP's that attempted gapping in prelim test: 4569
Number of HSP's gapped (non-prelim): 3587
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.