Search of human proteins with 239745831

Search of human proteins with 239745831

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745831 PREDICTED: high mobility group protein B3-like
protein-like [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169212060 PREDICTED: high mobility group protein B3-like prot...   436   e-123
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   436   e-123
gi|71143137 high-mobility group box 3 [Homo sapiens]                  351   2e-97
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   324   4e-89
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   324   4e-89
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   320   5e-88
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          307   4e-84
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          307   4e-84
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   307   4e-84
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   306   6e-84
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   306   6e-84
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   306   6e-84
gi|194688135 high-mobility group box 2 [Homo sapiens]                 273   7e-74
gi|194688133 high-mobility group box 2 [Homo sapiens]                 273   7e-74
gi|11321591 high-mobility group box 2 [Homo sapiens]                  273   7e-74
gi|4504425 high-mobility group box 1 [Homo sapiens]                   268   3e-72
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           259   1e-69
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   243   1e-64
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            199   1e-51
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          192   2e-49
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          192   2e-49
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          192   2e-49
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        140   6e-34
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          128   4e-30
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          128   4e-30
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          114   6e-26
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     77   1e-14
gi|169165476 PREDICTED: similar to high-mobility group box 2 [Ho...    75   5e-14
gi|239748075 PREDICTED: similar to high-mobility group box 2 [Ho...    75   5e-14
gi|239741972 PREDICTED: similar to high-mobility group box 2 [Ho...    75   5e-14

>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  436 bits (1121), Expect = e-123
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
           NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE
Sbjct: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180

Query: 181 EEDEDEEFCILHSVLTFWYVYCLHKTI 207
           EEDEDEEFCILHSVLTFWYVYCLHKTI
Sbjct: 181 EEDEDEEFCILHSVLTFWYVYCLHKTI 207


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  436 bits (1121), Expect = e-123
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
           NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE
Sbjct: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180

Query: 181 EEDEDEEFCILHSVLTFWYVYCLHKTI 207
           EEDEDEEFCILHSVLTFWYVYCLHKTI
Sbjct: 181 EEDEDEEFCILHSVLTFWYVYCLHKTI 207


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  351 bits (901), Expect = 2e-97
 Identities = 170/188 (90%), Positives = 179/188 (95%), Gaps = 1/188 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNP+VP+NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119
           +E+AKADKV YD+E+KDYGPAKGGKKK DPNAPKRPPSGFFLFCSEF PK KSTNPGI I
Sbjct: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120

Query: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179
           GDVAKKLGEMW NLNDSEKQPYIT+AAKLKEKYEKDVA YKSKGK DGAKGPAKVA+KKV
Sbjct: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180

Query: 180 EEEDEDEE 187
           EEEDE+EE
Sbjct: 181 EEEDEEEE 188


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  324 bits (830), Expect = 4e-89
 Identities = 156/187 (83%), Positives = 169/187 (90%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNP+VP+NFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
            E+AKAD+V YD+E+KDYGPAKGGKKKDPNAPKRPPSGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           DVAKKLGEMW NLNDSEKQPY+T+AAKLKEKYEKDV   K KGK  GAK PAKVA+KKVE
Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180

Query: 181 EEDEDEE 187
           EEDE++E
Sbjct: 181 EEDEEDE 187


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  324 bits (830), Expect = 4e-89
 Identities = 156/187 (83%), Positives = 169/187 (90%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNP+VP+NFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
            E+AKAD+V YD+E+KDYGPAKGGKKKDPNAPKRPPSGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           DVAKKLGEMW NLNDSEKQPY+T+AAKLKEKYEKDV   K KGK  GAK PAKVA+KKVE
Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180

Query: 181 EEDEDEE 187
           EEDE++E
Sbjct: 181 EEDEEDE 187


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  320 bits (820), Expect = 5e-88
 Identities = 155/187 (82%), Positives = 168/187 (89%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKP+GKMSAYAF VQTC +EHKKKNP+V +NFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
            E+AKAD+V YD+E+KDYGPAKGGKKKDPNAPKRPPSGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           DVAKKLGEMW NLNDSEKQPY+T+AAKLKEKYEKDV   K KGK  GAK PAKVA+KKVE
Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180

Query: 181 EEDEDEE 187
           EEDE++E
Sbjct: 181 EEDEEDE 187


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  307 bits (787), Expect = 4e-84
 Identities = 147/187 (78%), Positives = 165/187 (88%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MA+GD KKPKGKMSAYAFF QTCREEHKKKNP+VP+NF EFSKKCSE+ KTMS KEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
           +E+AK DKVHYDQE+KD GP +GGKKKDPNA KRP SGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           D+AKKLGEMW N +D EKQPYIT+AA LKEKYEKDVA YKSKGK D AKGP K+A KKV+
Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180

Query: 181 EEDEDEE 187
           E+D+++E
Sbjct: 181 EKDKEDE 187


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  307 bits (787), Expect = 4e-84
 Identities = 147/187 (78%), Positives = 165/187 (88%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MA+GD KKPKGKMSAYAFF QTCREEHKKKNP+VP+NF EFSKKCSE+ KTMS KEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
           +E+AK DKVHYDQE+KD GP +GGKKKDPNA KRP SGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           D+AKKLGEMW N +D EKQPYIT+AA LKEKYEKDVA YKSKGK D AKGP K+A KKV+
Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180

Query: 181 EEDEDEE 187
           E+D+++E
Sbjct: 181 EKDKEDE 187


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  307 bits (787), Expect = 4e-84
 Identities = 147/187 (78%), Positives = 165/187 (88%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MA+GD KKPKGKMSAYAFF QTCREEHKKKNP+VP+NF EFSKKCSE+ KTMS KEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120
           +E+AK DKVHYDQE+KD GP +GGKKKDPNA KRP SGFFLFCSEF PK KSTNPGI IG
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120

Query: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180
           D+AKKLGEMW N +D EKQPYIT+AA LKEKYEKDVA YKSKGK D AKGP K+A KKV+
Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180

Query: 181 EEDEDEE 187
           E+D+++E
Sbjct: 181 EKDKEDE 187


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  306 bits (785), Expect = 6e-84
 Identities = 157/188 (83%), Positives = 165/188 (87%), Gaps = 6/188 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119
           +E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSGFFLF SE  PK KSTNPGI I
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179
           GDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA  KSKGK DG+K PAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 180 EEEDEDEE 187
           EEEDEDEE
Sbjct: 176 EEEDEDEE 183


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  306 bits (785), Expect = 6e-84
 Identities = 157/188 (83%), Positives = 165/188 (87%), Gaps = 6/188 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119
           +E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSGFFLF SE  PK KSTNPGI I
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179
           GDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA  KSKGK DG+K PAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 180 EEEDEDEE 187
           EEEDEDEE
Sbjct: 176 EEEDEDEE 183


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  306 bits (785), Expect = 6e-84
 Identities = 157/188 (83%), Positives = 165/188 (87%), Gaps = 6/188 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119
           +E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSGFFLF SE  PK KSTNPGI I
Sbjct: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115

Query: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179
           GDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA  KSKGK DG+K PAKVA KKV
Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175

Query: 180 EEEDEDEE 187
           EEEDEDEE
Sbjct: 176 EEEDEDEE 183


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  273 bits (698), Expect = 7e-74
 Identities = 133/193 (68%), Positives = 156/193 (80%), Gaps = 6/193 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117
            ++AK+DK  YD+E+K+Y P KG   GKKKDPNAPKRPPS FFLFCSE  PK KS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSD-GAKGPAKV-- 174
            IGD AKKLGEMW   +  +KQPY  +AAKLKEKYEKD+A Y++KGKS+ G KGP +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 175 AQKKVEEEDEDEE 187
           ++KK E EDE+EE
Sbjct: 181 SKKKNEPEDEEEE 193


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  273 bits (698), Expect = 7e-74
 Identities = 133/193 (68%), Positives = 156/193 (80%), Gaps = 6/193 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117
            ++AK+DK  YD+E+K+Y P KG   GKKKDPNAPKRPPS FFLFCSE  PK KS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSD-GAKGPAKV-- 174
            IGD AKKLGEMW   +  +KQPY  +AAKLKEKYEKD+A Y++KGKS+ G KGP +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 175 AQKKVEEEDEDEE 187
           ++KK E EDE+EE
Sbjct: 181 SKKKNEPEDEEEE 193


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  273 bits (698), Expect = 7e-74
 Identities = 133/193 (68%), Positives = 156/193 (80%), Gaps = 6/193 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117
            ++AK+DK  YD+E+K+Y P KG   GKKKDPNAPKRPPS FFLFCSE  PK KS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSD-GAKGPAKV-- 174
            IGD AKKLGEMW   +  +KQPY  +AAKLKEKYEKD+A Y++KGKS+ G KGP +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 175 AQKKVEEEDEDEE 187
           ++KK E EDE+EE
Sbjct: 181 SKKKNEPEDEEEE 193


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  268 bits (684), Expect = 3e-72
 Identities = 130/194 (67%), Positives = 151/194 (77%), Gaps = 7/194 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           M KGDPKKP+GKMS+YAFFVQTCREEHKKK+P   +NF+EFSKKCSERWKTMS KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117
            ++AKADK  Y++E+K Y P KG  KK   DPNAPKRPPS FFLFCSE+ PK K  +PG+
Sbjct: 61  EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120

Query: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPA----K 173
            IGDVAKKLGEMW N    +KQPY  +AAKLKEKYEKD+A Y++KGK D AK       K
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 180

Query: 174 VAQKKVEEEDEDEE 187
             +KK EEEDE++E
Sbjct: 181 SKKKKEEEEDEEDE 194


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  259 bits (661), Expect = 1e-69
 Identities = 126/194 (64%), Positives = 149/194 (76%), Gaps = 7/194 (3%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           M KGDPKKP+GKMS+YAFFVQTCREEHKKK+    +NF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60

Query: 61  NELAKADKVHYDQEIKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117
            ++AKADK HY++++K Y P KG  KK   DPNAPKRPPS FFLFCSE+ PK K  +PG+
Sbjct: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120

Query: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPA----K 173
            IGDVAKKLGEMW N    +KQP   +AAKLKEKYEKD+A Y++KGK + AK       K
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180

Query: 174 VAQKKVEEEDEDEE 187
             +KK EEEDE++E
Sbjct: 181 SKKKKEEEEDEEDE 194


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  243 bits (619), Expect = 1e-64
 Identities = 124/149 (83%), Positives = 131/149 (87%), Gaps = 3/149 (2%)

Query: 40  EFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSG 98
           EFSKKCSERWKTMS KEKSKF+E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSG
Sbjct: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76

Query: 99  FFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAV 158
           FFLF SE  PK KSTNPGI IGDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA 
Sbjct: 77  FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136

Query: 159 YKSKGKSDGAKGPAKVAQKKVEEEDEDEE 187
            KSKGK DG+K PAKVA KKVEEEDEDEE
Sbjct: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEE 165



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62
           K DP  PK   S +  F    R + K  NP + I   + +KK  E W  ++  EK  +  
Sbjct: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121

Query: 63  LAKADKVHYDQEIKD 77
                K  Y++++ D
Sbjct: 122 KTAKLKEKYEKDVAD 136


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  199 bits (506), Expect = 1e-51
 Identities = 99/168 (58%), Positives = 121/168 (72%), Gaps = 5/168 (2%)

Query: 25  EEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGG 84
           EEHKKKNP   + F+EF KKCSE WKT+  KEK KF ++AKADK HY++E+K Y P KG 
Sbjct: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758

Query: 85  KKK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPY 141
           KKK   DPNAPKRPP  FFLFCSE+ PK K  +PG+ I DV KKL  MW N   ++KQ Y
Sbjct: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818

Query: 142 ITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQ--KKVEEEDEDEE 187
             +AAKLKEKY+KD+A Y++KGK + AK     A+  KK +EE+EDEE
Sbjct: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEE 866



 Score = 32.0 bits (71), Expect = 0.38
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK    A+  F    R + K ++P + I+  +  KK +  W   +  +K  + + A
Sbjct: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822

Query: 65  KADKVHYDQEIKDY---GPAKGGKKKDPNAPK 93
              K  Y ++I  Y   G     KK+   A K
Sbjct: 823 AKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEK 854


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  192 bits (487), Expect = 2e-49
 Identities = 98/169 (57%), Positives = 118/169 (69%), Gaps = 14/169 (8%)

Query: 33  KVPINFAEFSKKCSERWKTMSKKEKSKFN-------ELAKADKVHYDQEIKDYGPAKGGK 85
           +V +NF+EFSKKCSERWK MS KEK KF        ++AKADK HY +E+K Y P KG  
Sbjct: 162 RVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGET 221

Query: 86  KK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYI 142
           KK   DPNAPKRPPS FFL+ SE+ PK K   PG+  GDVAKKLGEMW N    +KQPY 
Sbjct: 222 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYE 281

Query: 143 TQAAKLKEKYEKDVAVYKSKGKSDGAKG----PAKVAQKKVEEEDEDEE 187
            ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+E++E
Sbjct: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDE 330



 Score = 35.4 bits (80), Expect = 0.034
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK   SA  FF+       K K  +  ++F + +KK  E W   +  +K  + + +
Sbjct: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKVHYDQEIKDYGPAKG 83
              K  Y+++I  Y  AKG
Sbjct: 285 AKLKEKYEKDIAAY-RAKG 302


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  192 bits (487), Expect = 2e-49
 Identities = 98/169 (57%), Positives = 118/169 (69%), Gaps = 14/169 (8%)

Query: 33  KVPINFAEFSKKCSERWKTMSKKEKSKFN-------ELAKADKVHYDQEIKDYGPAKGGK 85
           +V +NF+EFSKKCSERWK MS KEK KF        ++AKADK HY +E+K Y P KG  
Sbjct: 162 RVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGET 221

Query: 86  KK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYI 142
           KK   DPNAPKRPPS FFL+ SE+ PK K   PG+  GDVAKKLGEMW N    +KQPY 
Sbjct: 222 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYE 281

Query: 143 TQAAKLKEKYEKDVAVYKSKGKSDGAKG----PAKVAQKKVEEEDEDEE 187
            ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+E++E
Sbjct: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDE 330



 Score = 35.4 bits (80), Expect = 0.034
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK   SA  FF+       K K  +  ++F + +KK  E W   +  +K  + + +
Sbjct: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKVHYDQEIKDYGPAKG 83
              K  Y+++I  Y  AKG
Sbjct: 285 AKLKEKYEKDIAAY-RAKG 302


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  192 bits (487), Expect = 2e-49
 Identities = 98/169 (57%), Positives = 118/169 (69%), Gaps = 14/169 (8%)

Query: 33  KVPINFAEFSKKCSERWKTMSKKEKSKFN-------ELAKADKVHYDQEIKDYGPAKGGK 85
           +V +NF+EFSKKCSERWK MS KEK KF        ++AKADK HY +E+K Y P KG  
Sbjct: 162 RVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGET 221

Query: 86  KK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYI 142
           KK   DPNAPKRPPS FFL+ SE+ PK K   PG+  GDVAKKLGEMW N    +KQPY 
Sbjct: 222 KKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYE 281

Query: 143 TQAAKLKEKYEKDVAVYKSKGKSDGAKG----PAKVAQKKVEEEDEDEE 187
            ++AKLKEKYEKD+A Y++KGK D A       AK  +KK EEE+E++E
Sbjct: 282 KRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDE 330



 Score = 35.4 bits (80), Expect = 0.034
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK   SA  FF+       K K  +  ++F + +KK  E W   +  +K  + + +
Sbjct: 227 DPNAPKRPPSA--FFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKVHYDQEIKDYGPAKG 83
              K  Y+++I  Y  AKG
Sbjct: 285 AKLKEKYEKDIAAY-RAKG 302


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  140 bits (354), Expect = 6e-34
 Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 1/163 (0%)

Query: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
           M K    KPK  +S+Y  F+   R + K++ P   + F EFS+KCSE+W+++SK EK+K+
Sbjct: 1   MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60

Query: 61  NELAKADKVHYDQEIKDY-GPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119
             LAK DK  Y +E+ +Y G  K  +K+DP  P+RPPS F LFC +   + K  NP   +
Sbjct: 61  EALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV 120

Query: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSK 162
             VAK  G+MW    D EK PY  + A L+ KY +++ +Y+ +
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQ 163



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 3   KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62
           K DP++P+   S++  F Q    + K++NP   +   + +K   + W T +  EK  + +
Sbjct: 87  KRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV--VQVAKATGKMWSTATDLEKHPYEQ 144

Query: 63  LAKADKVHYDQEIKDYGPAKGGKKK 87
                +  Y +E++ Y      +KK
Sbjct: 145 RVALLRAKYFEELELYRKQCNARKK 169



 Score = 36.2 bits (82), Expect = 0.020
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 92  PKRPPSGFFLFCSEFCPKSKSTNPGIPIG--DVAKKLGEMWKNLNDSEKQPYITQAAKLK 149
           PK   S +  F   +  K K   P   +G  + ++K  E W++++  EK  Y   A   K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 150 EKYEKDVAVYKSKGKSDGAKGP 171
            +Y++++  Y  K K    + P
Sbjct: 69  ARYQEEMMNYVGKRKKRRKRDP 90


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  128 bits (321), Expect = 4e-30
 Identities = 65/125 (52%), Positives = 84/125 (67%), Gaps = 4/125 (3%)

Query: 65  KADKVHYDQEIKDYGPAKGGKK---KDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGD 121
           K D  HY++E+K Y P K   K   +DPNAPK PP  FF+F SE CPK K  +PG+ I D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISD 92

Query: 122 VAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVEE 181
           VAKKLGEMW  + + +K PY  +A KLKEKYEKD+A +  KGK D AK  A  A+K  ++
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 182 EDEDE 186
           ++ED+
Sbjct: 153 KEEDK 157



 Score = 33.9 bits (76), Expect = 0.100
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  +++ +K  + + A
Sbjct: 60  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 116

Query: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94
              K  Y+++I     A GGK K P+A K+
Sbjct: 117 VKLKEKYEKDI----AAFGGKGK-PDAAKK 141


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  128 bits (321), Expect = 4e-30
 Identities = 65/125 (52%), Positives = 84/125 (67%), Gaps = 4/125 (3%)

Query: 65  KADKVHYDQEIKDYGPAKGGKK---KDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGD 121
           K D  HY++E+K Y P K   K   +DPNAPK PP  FF+F SE CPK K  +PG+ I D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISD 92

Query: 122 VAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVEE 181
           VAKKLGEMW  + + +K PY  +A KLKEKYEKD+A +  KGK D AK  A  A+K  ++
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 182 EDEDE 186
           ++ED+
Sbjct: 153 KEEDK 157



 Score = 33.9 bits (76), Expect = 0.100
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  +++ +K  + + A
Sbjct: 60  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 116

Query: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94
              K  Y+++I     A GGK K P+A K+
Sbjct: 117 VKLKEKYEKDI----AAFGGKGK-PDAAKK 141


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  114 bits (285), Expect = 6e-26
 Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 85  KKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQ 144
           K +DPNAPK PP  FF+F SE CPK K  +PG+ I DVAKKLGEMW  + + +K PY  +
Sbjct: 84  KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142

Query: 145 AAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVEEEDEDE 186
           A KLKEKYEKD+A +  KGK D AK  A  A+K  ++++ED+
Sbjct: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184



 Score = 33.9 bits (76), Expect = 0.100
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK    A+  F     E+  K      ++ ++ +KK  E W  +++ +K  + + A
Sbjct: 87  DPNAPKSPPLAFFMFSS---EDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKA 143

Query: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94
              K  Y+++I     A GGK K P+A K+
Sbjct: 144 VKLKEKYEKDI----AAFGGKGK-PDAAKK 168


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 3/132 (2%)

Query: 53  SKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKS 112
           S +++ K  +L KA K+  D++ +   P +  K KDPNAPKRP S + L+ +    K KS
Sbjct: 510 SDRDEKKRKQLKKA-KMAKDRKSRKK-PVEVKKGKDPNAPKRPMSAYMLWLNASREKIKS 567

Query: 113 TNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPA 172
            +PGI I D++KK GE+WK ++  +K+ +  +A   +  YEK +  Y+  G+ + +K   
Sbjct: 568 DHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEG-GRGESSKRDK 626

Query: 173 KVAQKKVEEEDE 184
              +KKV+ + E
Sbjct: 627 SKKKKKVKVKME 638



 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)

Query: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELA 64
           DP  PK  MSAY  ++   RE+ K  +P + I   + SKK  E WK MSK++K +++  A
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISIT--DLSKKAGEIWKGMSKEKKEEWDRKA 600

Query: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKR 94
           +  +  Y++ +K+Y   +G   K   + K+
Sbjct: 601 EDARRDYEKAMKEYEGGRGESSKRDKSKKK 630


>gi|169165476 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
          MAKGD + PKGKMSA  FFV+TCREEHKK  P  P++F    K    R +    KEK   
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59

Query: 61 NELAKADKVHYDQEIKDYGPAKGGKKK 87
           +  +  K   D E+KDY PAKG KKK
Sbjct: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85


>gi|239748075 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
          MAKGD + PKGKMSA  FFV+TCREEHKK  P  P++F    K    R +    KEK   
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59

Query: 61 NELAKADKVHYDQEIKDYGPAKGGKKK 87
           +  +  K   D E+KDY PAKG KKK
Sbjct: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85


>gi|239741972 PREDICTED: similar to high-mobility group box 2
          [Homo sapiens]
          Length = 91

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1  MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60
          MAKGD + PKGKMSA  FFV+TCREEHKK  P  P++F    K    R +    KEK   
Sbjct: 1  MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59

Query: 61 NELAKADKVHYDQEIKDYGPAKGGKKK 87
           +  +  K   D E+KDY PAKG KKK
Sbjct: 60 IKSQRWVK-DADWEMKDYDPAKGHKKK 85


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.131    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,387,884
Number of Sequences: 37866
Number of extensions: 443844
Number of successful extensions: 2321
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 1868
Number of HSP's gapped (non-prelim): 382
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.