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Search of human proteins with 239745364
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ... 482 e-136
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ... 482 e-136
gi|110832843 TBP-associated factor 4 [Homo sapiens] 57 1e-08
gi|19924099 synapsin I isoform Ia [Homo sapiens] 54 1e-07
gi|19924097 synapsin I isoform Ib [Homo sapiens] 54 1e-07
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 52 3e-07
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 49 5e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 48 6e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 1e-05
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 47 2e-05
gi|239754620 PREDICTED: hypothetical protein [Homo sapiens] 46 2e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 46 3e-05
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 45 4e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 45 4e-05
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 44 1e-04
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 44 1e-04
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 44 1e-04
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 44 1e-04
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 44 1e-04
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 44 2e-04
gi|7706501 WW domain binding protein 11 [Homo sapiens] 44 2e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 43 3e-04
gi|239754468 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|239749023 PREDICTED: hypothetical protein XP_002346884 [Homo ... 43 3e-04
gi|239743042 PREDICTED: hypothetical protein XP_002342725 [Homo ... 43 3e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 3e-04
gi|33286446 opioid growth factor receptor [Homo sapiens] 42 3e-04
>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
sapiens]
Length = 229
Score = 482 bits (1241), Expect = e-136
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP 60
MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP
Sbjct: 1 MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP 60
Query: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA
Sbjct: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
Query: 121 PSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGEL 180
PSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGEL
Sbjct: 121 PSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGEL 180
Query: 181 QAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG 229
QAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG
Sbjct: 181 QAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG 229
>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
Length = 229
Score = 482 bits (1241), Expect = e-136
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP 60
MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP
Sbjct: 1 MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP 60
Query: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA
Sbjct: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
Query: 121 PSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGEL 180
PSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGEL
Sbjct: 121 PSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGEL 180
Query: 181 QAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG 229
QAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG
Sbjct: 181 QAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG 229
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 57.0 bits (136), Expect = 1e-08
Identities = 42/119 (35%), Positives = 48/119 (40%), Gaps = 9/119 (7%)
Query: 14 TPRPLPASAGAQGSQARSGLRL-------CRTTQGRPAGGASPPPSPRSRPEGPGPPRPA 66
TP A+AGA G+ SG +G P PPP+ R+RP G GP RP
Sbjct: 47 TPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPG 106
Query: 67 TPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRGP 125
PS RRP L A PA + RP AP A A A PA GP
Sbjct: 107 PPSPRRP--LVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGP 163
Score = 42.7 bits (99), Expect = 3e-04
Identities = 37/109 (33%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 15 PRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPATPSARRPQ 74
P P PA+ G Q P GA+ PP+P + P P P PA P+A P
Sbjct: 227 PLPKPAAPGT-------------VIQTPPFVGAAAPPAP-AAPSPPAAPAPAAPAAAPPP 272
Query: 75 GLSAGVSAGPAQRSRPL-QLAGPRDRAPARALHARTRMGRAARGPPAPS 122
A PA +RP AGP APA A + G +A PAP+
Sbjct: 273 PPPA-----PATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA 316
Score = 41.2 bits (95), Expect = 7e-04
Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 4 LRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAG--------GASPPPSPRS 55
LRP G+ P+PA+A +G +PAG G P P P
Sbjct: 126 LRPPPEGSAGSCAPVPAAAAVA-----AGPEPAPAGPAKPAGPAALAARAGPGPGPGPGP 180
Query: 56 RPEGPGPPRPATPSARRPQGLSAGV-----SAGPA----QRSRPLQLAGPRDRAPARALH 106
P GPGP +PA P A + SA + +A PA L P+ AP +
Sbjct: 181 GP-GPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ 239
Query: 107 ARTRMGRAARGPPAPS 122
+G AA PPAP+
Sbjct: 240 TPPFVGAAA--PPAPA 253
Score = 32.7 bits (73), Expect = 0.26
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Query: 9 PHQGGTPRPLPASAG---AQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
P GG RP P S A +L +G AG +P P+ + GP P P
Sbjct: 97 PGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGS-AGSCAPVPAAAAVAAGP-EPAP 154
Query: 66 ATPSARRPQGLSA-GVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAA 115
A P+ +P G +A AGP P GP PA A+T G AA
Sbjct: 155 AGPA--KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAA 203
Score = 29.6 bits (65), Expect = 2.2
Identities = 34/124 (27%), Positives = 44/124 (35%), Gaps = 12/124 (9%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGG-----ASPPPSPRSR 56
+P P P P P A A A + L R G PAG A PPP+
Sbjct: 248 APPAPAAPSPPAAPAPA-APAAAPPPPPPAPATLARPP-GHPAGPPTAAPAVPPPAAAQN 305
Query: 57 PEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGR--A 114
G P+A P G+S G A + G + +P R + A + A
Sbjct: 306 GGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAA---PAPGVKAESPKRVVQAAPPAAQTLA 362
Query: 115 ARGP 118
A GP
Sbjct: 363 ASGP 366
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 53.5 bits (127), Expect = 1e-07
Identities = 53/153 (34%), Positives = 63/153 (41%), Gaps = 41/153 (26%)
Query: 3 PLRPRGPHQGGTPRPLPA----------SAGAQGSQARSGLRLCRTTQGRPAGGASPP-- 50
P + R P QGG P+P P QG Q SGL G PAG P
Sbjct: 456 PAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGL-------GPPAGSPLPQRL 508
Query: 51 PSPRSRPEGP----GPP--------RP------ATPSARRPQGLSAGVSAGPAQRSRPLQ 92
PSP S P+ P PP RP A P+AR P S AGP Q +R
Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS 568
Query: 93 LAGPRDRAPARALHARTRMGRAARGPPAPSRGP 125
++GP AP +A A G+ +GPP GP
Sbjct: 569 VSGP---APPKASGAPPG-GQQRQGPPQKPPGP 597
Score = 41.6 bits (96), Expect = 6e-04
Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRP-AGGASPPPSPRSRPEGP 60
SPL R P P+ PAS A +Q + Q RP AGG PP+ R P P
Sbjct: 502 SPLPQRLPSPTSAPQQ-PASQAAPPTQGQG-------RQSRPVAGGPGAPPAARP-PASP 552
Query: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRP--LQLAGPRDRAPARALHARTRMGRAARGP 118
P R A P Q +G + A + P Q GP + P A R +A++
Sbjct: 553 SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTR----QASQAG 608
Query: 119 PAPSRGP 125
P P GP
Sbjct: 609 PVPRTGP 615
Score = 39.3 bits (90), Expect = 0.003
Identities = 57/189 (30%), Positives = 71/189 (37%), Gaps = 33/189 (17%)
Query: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPA 66
RG H G TP P G Q SQ +G P PPP GPGP R
Sbjct: 430 RGSH-GQTPSPGALPLGRQTSQQPAG----------PPAQQRPPPQGGPPQPGPGPQRQG 478
Query: 67 TPSARRP-----QGLSA-GVSAG-PAQRSRPLQLAGPRDRAPARALHARTRMGRAAR--- 116
P +RP Q LS G AG P + P + P+ A ++A GR +R
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPA-SQAAPPTQGQGRQSRPVA 537
Query: 117 -GPPAP-------SRGPLKRVTWTCAVRRLWTSW-AWALRGGTDPVLDRRQQLTPRHRPA 167
GP AP S P ++ A R+ S A G P +RQ P +P
Sbjct: 538 GGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQ--GPPQKPP 595
Query: 168 GETSGARRA 176
G R+A
Sbjct: 596 GPAGPTRQA 604
Score = 37.0 bits (84), Expect = 0.014
Identities = 39/136 (28%), Positives = 48/136 (35%), Gaps = 28/136 (20%)
Query: 2 SPLRPRGPHQG------GTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRS 55
SP R GP Q P P AS G Q R G +P G P P
Sbjct: 553 SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQG------PPQKPPG----PAGPTR 602
Query: 56 RPEGPGP-PRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRA 114
+ GP PR P+ ++P+ GPA R +P P P A A
Sbjct: 603 QASQAGPVPRTGPPTTQQPR----PSGPGPAGRPKPQLAQKPSQDVPPPAT-------AA 651
Query: 115 ARGPPAPSRGPLKRVT 130
A GPP P + +T
Sbjct: 652 AGGPPHPQLNKSQSLT 667
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 53.5 bits (127), Expect = 1e-07
Identities = 53/153 (34%), Positives = 63/153 (41%), Gaps = 41/153 (26%)
Query: 3 PLRPRGPHQGGTPRPLPA----------SAGAQGSQARSGLRLCRTTQGRPAGGASPP-- 50
P + R P QGG P+P P QG Q SGL G PAG P
Sbjct: 456 PAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGL-------GPPAGSPLPQRL 508
Query: 51 PSPRSRPEGP----GPP--------RP------ATPSARRPQGLSAGVSAGPAQRSRPLQ 92
PSP S P+ P PP RP A P+AR P S AGP Q +R
Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS 568
Query: 93 LAGPRDRAPARALHARTRMGRAARGPPAPSRGP 125
++GP AP +A A G+ +GPP GP
Sbjct: 569 VSGP---APPKASGAPPG-GQQRQGPPQKPPGP 597
Score = 41.6 bits (96), Expect = 6e-04
Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRP-AGGASPPPSPRSRPEGP 60
SPL R P P+ PAS A +Q + Q RP AGG PP+ R P P
Sbjct: 502 SPLPQRLPSPTSAPQQ-PASQAAPPTQGQG-------RQSRPVAGGPGAPPAARP-PASP 552
Query: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRP--LQLAGPRDRAPARALHARTRMGRAARGP 118
P R A P Q +G + A + P Q GP + P A R +A++
Sbjct: 553 SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTR----QASQAG 608
Query: 119 PAPSRGP 125
P P GP
Sbjct: 609 PVPRTGP 615
Score = 39.3 bits (90), Expect = 0.003
Identities = 57/189 (30%), Positives = 71/189 (37%), Gaps = 33/189 (17%)
Query: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPA 66
RG H G TP P G Q SQ +G P PPP GPGP R
Sbjct: 430 RGSH-GQTPSPGALPLGRQTSQQPAG----------PPAQQRPPPQGGPPQPGPGPQRQG 478
Query: 67 TPSARRP-----QGLSA-GVSAG-PAQRSRPLQLAGPRDRAPARALHARTRMGRAAR--- 116
P +RP Q LS G AG P + P + P+ A ++A GR +R
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPA-SQAAPPTQGQGRQSRPVA 537
Query: 117 -GPPAP-------SRGPLKRVTWTCAVRRLWTSW-AWALRGGTDPVLDRRQQLTPRHRPA 167
GP AP S P ++ A R+ S A G P +RQ P +P
Sbjct: 538 GGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQ--GPPQKPP 595
Query: 168 GETSGARRA 176
G R+A
Sbjct: 596 GPAGPTRQA 604
Score = 38.1 bits (87), Expect = 0.006
Identities = 34/117 (29%), Positives = 42/117 (35%), Gaps = 17/117 (14%)
Query: 2 SPLRPRGPHQG------GTPRPLPASAGAQGSQARSGLR---------LCRTTQGRPAGG 46
SP R GP Q P P AS G Q R G + +Q P
Sbjct: 553 SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPR 612
Query: 47 ASPPPSPRSRPEGPGPP-RPATPSARRP-QGLSAGVSAGPAQRSRPLQLAGPRDRAP 101
PP + + RP GPGP RP A++P Q + +A P A P P
Sbjct: 613 TGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 52.4 bits (124), Expect = 3e-07
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 24/121 (19%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
+P+GP G P+ P G++ +RS G+P G PPP ++P+GP PP
Sbjct: 273 KPQGPPPPGKPQGPPPQGGSKSRSSRS-------PPGKPQG---PPPQGGNQPQGP-PPP 321
Query: 65 PATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRG 124
P P PQG GP +P GP + +++ R+AR PP +G
Sbjct: 322 PGKPQGPPPQG--GNKPQGPPPPGKP---QGPPPQGGSKS--------RSARSPPGKPQG 368
Query: 125 P 125
P
Sbjct: 369 P 369
Score = 49.7 bits (117), Expect = 2e-06
Identities = 41/127 (32%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 3 PLRPRGPH-QGGT-PRPLPASAGAQGS--QARSGLRLCRTTQGRPAGGASPPPSPRSRPE 58
P +P+GP QGG P+ P QG Q + R R+ G+P G PPP ++P+
Sbjct: 136 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQG---PPPQGGNQPQ 192
Query: 59 GPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGP 118
GP PP P P PQG GP +P GP + ++ AR+ G+ P
Sbjct: 193 GP-PPPPGKPQGPPPQG--GNKPQGPPPPGKP---QGPPPQGDNKSQSARSPPGKPQGPP 246
Query: 119 PAPSRGP 125
P P
Sbjct: 247 PQGGNQP 253
Score = 48.9 bits (115), Expect = 4e-06
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 24/121 (19%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
+P+GP G P+ P + ARS G+P G PPP ++P+GP PP
Sbjct: 211 KPQGPPPPGKPQGPPPQGDNKSQSARS-------PPGKPQG---PPPQGGNQPQGP-PPP 259
Query: 65 PATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRG 124
P P PQG GP +P GP + +++ R++R PP +G
Sbjct: 260 PGKPQGPPPQG--GNKPQGPPPPGKP---QGPPPQGGSKS--------RSSRSPPGKPQG 306
Query: 125 P 125
P
Sbjct: 307 P 307
Score = 46.2 bits (108), Expect = 2e-05
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 31/133 (23%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPEGP- 60
+P+GP G P+ P QG ++RS QG P G + PP P +P+GP
Sbjct: 88 KPQGPPPPGKPQGPPP----QGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 143
Query: 61 --------GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMG 112
GPP P P PQG + S+ RS P + GP + G
Sbjct: 144 PQGGNKPQGPPPPGKPQGPPPQGDNKSRSS----RSPPGKPQGPPPQG-----------G 188
Query: 113 RAARGPPAPSRGP 125
+GPP P P
Sbjct: 189 NQPQGPPPPPGKP 201
Score = 44.3 bits (103), Expect = 9e-05
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
+P+GP G P+ P G++ ARS G+P G PP + P+GP PP
Sbjct: 335 KPQGPPPPGKPQGPPPQGGSKSRSARS-------PPGKPQG---PPQQEGNNPQGPPPPA 384
Query: 65 PATPSARRPQGLSAGVSAGP 84
P ++PQ AG GP
Sbjct: 385 GGNP--QQPQAPPAGQPQGP 402
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 27 SQARSGLRLCRTTQGRPAGGASP---PPSPRSRPEGP----------GPPRPATPSARRP 73
SQ S + QG P G + PPSP +P+GP PP P P P
Sbjct: 24 SQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 83
Query: 74 QGLSAGVSAGPAQRSRPLQLAGPRDRA----PARALHARTRMGRAARGPPAPSRGP 125
QG + P + + G + R+ P + + G +GPP P P
Sbjct: 84 QGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKP 139
Score = 36.2 bits (82), Expect = 0.024
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 21/131 (16%)
Query: 6 PRG-PHQGGT-PRPLPASAGA-QGSQARSGLRLCRTTQGRPAGGASPPPSPRSRP----- 57
P+G P QGG P+ P+ G QG + G +P G PP P+ P
Sbjct: 36 PQGAPPQGGNKPQGPPSPPGKPQGPPPQGG--------NQPQGPPPPPGKPQGPPPQGGN 87
Query: 58 EGPGPPRPATPSARRPQG-LSAGVSAGPAQRSRPLQLAGPRDRA----PARALHARTRMG 112
+ GPP P P PQG S + P + P G + + P + + G
Sbjct: 88 KPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 147
Query: 113 RAARGPPAPSR 123
+GPP P +
Sbjct: 148 NKPQGPPPPGK 158
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 48.5 bits (114), Expect = 5e-06
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 3 PLRPRGPH-QGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPG 61
P +P+GP QGG P+ PA G++ ARS G+P G PP + P+GP
Sbjct: 94 PGKPQGPPPQGGKPQGPPAQGGSKSQSARS-------PPGKPQG---PPQQEGNNPQGPP 143
Query: 62 PPRPATPSARRPQGLSAGVSAGP 84
PP P ++PQ AG GP
Sbjct: 144 PPAGGNP--QQPQAPPAGQPQGP 164
Score = 43.1 bits (100), Expect = 2e-04
Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 17/112 (15%)
Query: 27 SQARSGLRLCRTTQG-RPAGGASP--PPSPRSRPEGP---------GPPRPATPSARRPQ 74
SQ S + QG P GG P PP P +P+GP GPP P P PQ
Sbjct: 24 SQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 83
Query: 75 G-LSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRGP 125
G S + P + P G PA+ ++AR PP +GP
Sbjct: 84 GDKSRSPRSPPGKPQGPPPQGGKPQGPPAQG----GSKSQSARSPPGKPQGP 131
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 48.1 bits (113), Expect = 6e-06
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPA-GGASP--PPSPRSRPEGP- 60
RP+GP G P+ P QG ++RS QG P GG P PP P +P+GP
Sbjct: 128 RPQGPPPPGKPQGPPP----QGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 183
Query: 61 --------GPPRPATPSARRPQG-LSAGVSAGPAQRSRPLQLAGPRDRA----PARALHA 107
GPP P P PQG S + P + P G + + P +
Sbjct: 184 PQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 243
Query: 108 RTRMGRAARGPPAPSR 123
+ G +GPP P +
Sbjct: 244 PPQGGNKPQGPPPPGK 259
Score = 48.1 bits (113), Expect = 6e-06
Identities = 41/139 (29%), Positives = 55/139 (39%), Gaps = 23/139 (16%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPEGP- 60
+P+GP G P+ P QG ++RS QG P G + PP P +P+GP
Sbjct: 189 KPQGPPPPGKPQGPPP----QGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 244
Query: 61 --------GPPRPATPSARRPQGLSAGVSA--GPAQRSRPLQLAGPRDRAPARALHARTR 110
GPP P P QG S SA P + P Q G + P +
Sbjct: 245 PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQ 304
Query: 111 MGRA-----ARGPPAPSRG 124
+A +GPP P +G
Sbjct: 305 QPQAPPAGQPQGPPRPPQG 323
Score = 46.6 bits (109), Expect = 2e-05
Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 21/136 (15%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPEGP- 60
+P+GP G P+ P QG ++RS QG P G + PP P +P+GP
Sbjct: 67 KPQGPPPPGKPQGPPP----QGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 122
Query: 61 --------GPPRPATPSARRPQG-LSAGVSAGPAQRSRPLQLAGPRDRA----PARALHA 107
GPP P P PQG S + P + P G + + P +
Sbjct: 123 PQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 182
Query: 108 RTRMGRAARGPPAPSR 123
+ G+ +GPP P +
Sbjct: 183 PPQGGKKPQGPPPPGK 198
Score = 35.8 bits (81), Expect = 0.031
Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 20/120 (16%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPP--PSPRSRPEGPGPP 63
P+GP G +P QG G QG P G + P P P +P+GP P
Sbjct: 36 PQGPSPQGGNKP-------QGPPPPPG-----KPQGPPPQGGNKPQGPPPPGKPQGPPPQ 83
Query: 64 RPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSR 123
+ S R P G G P Q Q P P + + G +GPP P +
Sbjct: 84 GDKSRSPRSPPGKPQG---PPPQGGNQPQGPPP---PPGKPQGPPPQGGNRPQGPPPPGK 137
Score = 35.0 bits (79), Expect = 0.053
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 41 GRPAGGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRA 100
G P G P P ++P+GP PP P P PQG + P + + G + R+
Sbjct: 34 GNPQG---PSPQGGNKPQGP-PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRS 89
Query: 101 ----PARALHARTRMGRAARGPPAPSRGP 125
P + + G +GPP P P
Sbjct: 90 PRSPPGKPQGPPPQGGNQPQGPPPPPGKP 118
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.0 bits (110), Expect = 1e-05
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPG 61
+P P+G +P+ P + A + GL + +G P A+ PPSP+ P P
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT-PSPKGAPTTPAATPPSPKGGPATPP 1259
Query: 62 PPRPATPSARRPQGLSAGVSAGPAQRS-RPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
P TP A P L G++ P + + P + P + + A PP+
Sbjct: 1260 PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS 1319
Query: 121 PSRGP 125
P P
Sbjct: 1320 PKGSP 1324
Score = 44.3 bits (103), Expect = 9e-05
Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 9 PHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP---GPPRP 65
PH+G + +G A S +G P A+ PPSP+ P P G P P
Sbjct: 1282 PHKGAPNPAVVTPPSPKGGPATS------PPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335
Query: 66 ATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRGP 125
+ P+G + P+ + P + P A + G A PP+P RGP
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA--TPSHKGGPAMTPPSPKRGP 1393
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 16/127 (12%)
Query: 3 PLRPRGPHQGGTPRPLPASA---------GAQGSQARSGLRLCRTTQGRPAGGASPPPSP 53
P GP TP P A A A+ + A G+ + +G P A+ PPSP
Sbjct: 894 PFPKEGP---ATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSP 950
Query: 54 RSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGR 113
+ P P P TP A P G A P+ + P P P+ T +
Sbjct: 951 KGGPATPSPKWAPTPPAATPPSPKGG-PATPSPKGAP---TPPAATPPSPKGGPATPSPK 1006
Query: 114 AARGPPA 120
A PPA
Sbjct: 1007 GAPTPPA 1013
Score = 38.5 bits (88), Expect = 0.005
Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 6/127 (4%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPG 61
+P P+G P+ P + A + GL +G P A+ PPSP+ P
Sbjct: 1132 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT-PPPKGAPTTPAATPPSPKGGLATPS 1190
Query: 62 PP-RPATPSARRPQGLSAGVSAGPAQRSRPLQLAG--PRDRAPARALHARTRMGRAARGP 118
P P TP+A P G A P+ + P A P + + A P
Sbjct: 1191 PKGAPTTPAATPPS--PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1248
Query: 119 PAPSRGP 125
P+P GP
Sbjct: 1249 PSPKGGP 1255
Score = 38.1 bits (87), Expect = 0.006
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPG 61
+P P+G +P+ P A + G + +G P A+ PPSP+ P P
Sbjct: 946 TPPSPKGGPATPSPKWAPTPPAATPPSPKGG-PATPSPKGAPTPPAATPPSPKGGPATPS 1004
Query: 62 PPRPATPSARRPQGLSAGVSAGPAQR--SRPLQLAGPRDR-APARALHARTRMGRAARGP 118
P TP A P +A P + S P P + +PA + A
Sbjct: 1005 PKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATL 1064
Query: 119 PAPSRGP 125
P+P GP
Sbjct: 1065 PSPKGGP 1071
Score = 38.1 bits (87), Expect = 0.006
Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 9 PHQGGTPRPLPASAGAQGSQARS-----GLRLCRTTQGRPAGGASPPPSPRSRPEGPGPP 63
P G+P P GA + A + G + +G P A+ PPSP+ P P P
Sbjct: 1041 PSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPK 1100
Query: 64 RPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMG---RAARGPPA 120
P A P G++ P + + A P +P L G A PP+
Sbjct: 1101 GAPMPPAATPPSPKGGLATPPHKGAPTTPAATP--PSPKGGLATPPPKGAPTTPAATPPS 1158
Query: 121 PSRG 124
P G
Sbjct: 1159 PKGG 1162
Score = 35.4 bits (80), Expect = 0.041
Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 6/126 (4%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPG 61
+P P+G +P+ P A + GL +G P A+ PPSP+ P
Sbjct: 1086 TPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT-PPHKGAPTTPAATPPSPKGGLATPP 1144
Query: 62 PPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMG---RAARGP 118
P T A P G++ P + + A P +P L + G A P
Sbjct: 1145 PKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP--PSPKGGLATPSPKGAPTTPAATP 1202
Query: 119 PAPSRG 124
P+P G
Sbjct: 1203 PSPKGG 1208
Score = 31.2 bits (69), Expect = 0.77
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 8/128 (6%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPG 61
+P P+G +P+ P + +G A+ PPSP+ P
Sbjct: 992 TPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATP 1051
Query: 62 PPR--PATPSARRPQGLSAGVSAGPAQRSRPLQLAG--PRDR-APARALHARTRMGRAAR 116
P+ P TP+A P G A P+ + P A P + PA M AA
Sbjct: 1052 LPKGAPTTPAATLPS--PKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAAT 1109
Query: 117 GPPAPSRG 124
PP+P G
Sbjct: 1110 -PPSPKGG 1116
Score = 30.8 bits (68), Expect = 1.0
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 46 GASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQR------SRPLQLAGPRDR 99
G+ P+ P P P TPSA P GV+ P + + P GP
Sbjct: 845 GSKDSPATTHSPTPPSPKGAPTPSAVTPLS-PKGVTLPPKETPTPSVVNLPFPKEGPATP 903
Query: 100 AP--ARALHARTRMGRAARGPPAPSRGP 125
AP A AL + + AR PAP P
Sbjct: 904 APKQAPALSMTSSSPKKARATPAPKGIP 931
Score = 28.1 bits (61), Expect = 6.5
Identities = 44/167 (26%), Positives = 59/167 (35%), Gaps = 40/167 (23%)
Query: 1 MSPLRPRGPHQGGTPR--PLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRP- 57
++P P+G P+ P P +A + G +G P A PPSP+ P
Sbjct: 1292 VTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTP---PPKGAPTPPAVTPPSPKGTPT 1348
Query: 58 ------------------EGPGPPRPATPSAR-RPQGLSAGVSAGPA------QRSRPLQ 92
EGP PP ATPS + P GPA + P
Sbjct: 1349 LPATTPSSKGGPTTPSSKEGPTPP-AATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAV 1407
Query: 93 LAGPRDRAPARALHARTRMGRAARG-----PPAPSRGPLKRVTWTCA 134
+ +APA + TR G A PPA + LK+ T A
Sbjct: 1408 IPLSPKKAPATPV---TREGAATPSKGDLTPPAVTPVSLKKAPATSA 1451
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 46.6 bits (109), Expect = 2e-05
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
+P+GP G P+ PA G++ ARS G+P G PP + P+GP PP
Sbjct: 117 KPQGPPPPGKPQGPPAQGGSKSQSARS-------PPGKPQG---PPQQEGNNPQGPPPPA 166
Query: 65 PATPSARRPQGLSAGVSAGP 84
P ++PQ AG GP
Sbjct: 167 GGNP--QQPQAPPAGQPQGP 184
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 3 PLRPRGPH-QGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRP---- 57
P +P+GP QGG P+ P QG G QG PA G S S RS P
Sbjct: 94 PGKPQGPPPQGGKPQGPPP----QGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQ 149
Query: 58 -----EGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGP 96
EG P P P+ PQ A + P RP Q P
Sbjct: 150 GPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRP 193
Score = 37.4 bits (85), Expect = 0.011
Identities = 38/137 (27%), Positives = 52/137 (37%), Gaps = 22/137 (16%)
Query: 6 PRGPH-QGGTPR--PLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSP-----RSRP 57
P+GP QGG P P QG + G + QG P G P P RS
Sbjct: 36 PQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNK----PQGPPPPGKPQGPPPQGDKSRSPR 91
Query: 58 EGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHART-------- 109
PG P+ P +PQG P P + GP + +++ AR+
Sbjct: 92 SPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGP 151
Query: 110 --RMGRAARGPPAPSRG 124
+ G +GPP P+ G
Sbjct: 152 PQQEGNNPQGPPPPAGG 168
Score = 33.9 bits (76), Expect = 0.12
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 18/85 (21%)
Query: 41 GRPAGGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRA 100
G P G P P ++P+GP PP P P PQG GP +P GP +
Sbjct: 34 GNPQG---PSPQGGNKPQGPPPP-PGKPQGPPPQG--GNKPQGPPPPGKP---QGPPPQG 84
Query: 101 PARALHARTRMGRAARGPPAPSRGP 125
R+ R PP +GP
Sbjct: 85 D---------KSRSPRSPPGKPQGP 100
>gi|239754620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 551
Score = 46.2 bits (108), Expect = 2e-05
Identities = 51/172 (29%), Positives = 60/172 (34%), Gaps = 22/172 (12%)
Query: 12 GGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRP--EGPGPPRPATPS 69
GGT R A+ GAQ S A L RT PPPSP +GP PP P +
Sbjct: 384 GGTKRGSQAATGAQPSVATWRAVLPRT----------PPPSPPGSQGRQGPEPPSPVGQA 433
Query: 70 ARRPQGLSAGVSAGPAQ---RSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSRGPL 126
+ GV + PL +A P R R H R A P
Sbjct: 434 QALEEACECGVDTARPEVGGPHGPLLVAPPGQRVAVRRRHHEVTAVDDLRAEQAARAAPE 493
Query: 127 KRVTWTCAVRRLWTS---WAWALRGGT----DPVLDRRQQLTPRHRPAGETS 171
RV C R+W RG T RR +L P R AG +S
Sbjct: 494 TRVLRVCVRVRVWAGRDPRDLQARGQTCQRAGHGCRRRNRLVPAPRSAGNSS 545
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 45.8 bits (107), Expect = 3e-05
Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
Query: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPA 66
R P G P+ P G + G + RP PPP ++ +GP PPRP
Sbjct: 39 RRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP-PPRPG 97
Query: 67 TPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA---PSR 123
P + PQG S GP RP + GP + ++ R G+ PP S+
Sbjct: 98 KPEGQPPQG--GNQSQGPP--PRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ 153
Query: 124 GPLKR 128
GP R
Sbjct: 154 GPPPR 158
Score = 41.6 bits (96), Expect = 6e-04
Identities = 41/130 (31%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 3 PLRPRG-PHQGGTPR--PLPASAGAQGSQARSGLRLCRTTQG---RPAGGASPPPSPRSR 56
P +P G P QGG P P +G + G +QG RP PPP ++
Sbjct: 96 PGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGG----NQSQGPPPRPGKPEGPPPQGGNQ 151
Query: 57 PEGPGPPRPATPSARRPQG--LSAGVSAGPAQRSRP-----LQLAGPRDRAPARALHART 109
+GP PPRP P PQG S G P + P Q GP R P +
Sbjct: 152 SQGP-PPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPR-PGKPEGPPP 209
Query: 110 RMGRAARGPP 119
+ G ++GPP
Sbjct: 210 QGGNQSQGPP 219
Score = 37.4 bits (85), Expect = 0.011
Identities = 39/131 (29%), Positives = 50/131 (38%), Gaps = 21/131 (16%)
Query: 3 PLRPRGPH-QGGTPR--PLPASAGAQGSQARSGLRLCRTTQG---RPAGGASPPPSPRSR 56
P +P GP QGG P P +G + G +QG RP PPP ++
Sbjct: 159 PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGG----NQSQGPPPRPGKPEGPPPQGGNQ 214
Query: 57 PEGPGPPRPATPSARRPQG--LSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRA 114
+GP PPRP P QG G P + P G + + P GR
Sbjct: 215 SQGP-PPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPP-------GR- 265
Query: 115 ARGPPAPSRGP 125
+GPP P P
Sbjct: 266 PQGPPPPGGNP 276
Score = 37.0 bits (84), Expect = 0.014
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 3 PLRPRGP-HQGGTPR--PLPASAGAQGSQARSGLRLCRTT-----QGRPAGGASPP---P 51
P +P GP QGG P P QG + G + R QG P G +P P
Sbjct: 222 PGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLP 281
Query: 52 SPRSRPEGPGPPRPATPSARRPQG 75
P +P+GP PP R PQG
Sbjct: 282 PPAGKPQGPPPPPQGGRPHRPPQG 305
Score = 34.7 bits (78), Expect = 0.070
Identities = 41/138 (29%), Positives = 49/138 (35%), Gaps = 37/138 (26%)
Query: 3 PLRPRGP-------HQGGTPRP-----LPASAG--AQGSQARSGLRLCRTTQG--RPAGG 46
P +P GP QG PRP P G +QG R G +QG +P G
Sbjct: 180 PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQG- 238
Query: 47 ASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALH 106
PPP P +P+GP P P P G G P P Q P P
Sbjct: 239 --PPPHP-GKPQGPPPQEGNKPQRPPPPGRPQG---PPPPGGNPQQPLPPPAGKP----- 287
Query: 107 ARTRMGRAARGPPAPSRG 124
+GPP P +G
Sbjct: 288 ---------QGPPPPPQG 296
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 45.4 bits (106), Expect = 4e-05
Identities = 63/182 (34%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 42 RPAGGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPR-DRA 100
RP G PP PR+ GP PA P A G AG +A A R RP AG R R+
Sbjct: 114 RPPPGTPPPRCPRTLAPGPRGLFPAPPPAPARTG-PAGKAA--ADRGRPGPAAGRRVRRS 170
Query: 101 PA--RALHARTRMGRAARGPPAPSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQ 158
P+ L A+TR+GR GPL C + L A L GG+ L +
Sbjct: 171 PSFPPFLLAQTRLGRT---------GPLA----LCLL--LLLHGAMRLGGGSREKLACGR 215
Query: 159 QLTPRHRPAGETSGARRARGELQAWGAWPTWCGAGRGRRGR-GESRGAFFMGGGAGAAGL 217
R G G RRA E AGR RR R G +RG GG AG
Sbjct: 216 --AGRAARTGRGEGGRRAEEE-----------AAGRRRRRRPGRTRGIPRAAGGLSRAGT 262
Query: 218 RL 219
R+
Sbjct: 263 RV 264
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.4 bits (106), Expect = 4e-05
Identities = 37/124 (29%), Positives = 46/124 (37%), Gaps = 13/124 (10%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGP 62
P PR P G TP P P + G + +R + P P P SR P
Sbjct: 207 PGGPRQPSPGPTPPPFPGNRGT--ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKP 264
Query: 63 PRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPS 122
P P P RP V P Q ++P + PR A + +A PP PS
Sbjct: 265 PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASS----------QAPPPPPPPS 314
Query: 123 R-GP 125
R GP
Sbjct: 315 RPGP 318
Score = 37.0 bits (84), Expect = 0.014
Identities = 42/136 (30%), Positives = 49/136 (36%), Gaps = 22/136 (16%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQAR---SGLRLCRTTQGRPAGGAS----PPPSPR 54
+P P P + G P PLP S+ R L L +T P+ G S PPPS R
Sbjct: 306 APPPPPPPSRPGPP-PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 55 -----SRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSR---PLQLAGPRDRAPARALH 106
P G P P P R S + A P SR +GPR P
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPP---- 420
Query: 107 ARTRMGRAARGPPAPS 122
R A PP PS
Sbjct: 421 --DRPSAGAPPPPPPS 434
Score = 35.0 bits (79), Expect = 0.053
Identities = 27/100 (27%), Positives = 30/100 (30%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
P P + P P P S R Q P SPP R PGP P
Sbjct: 161 PPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220
Query: 66 ATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARAL 105
P R + P S P P P+RAL
Sbjct: 221 PFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRAL 260
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP-PPSPRSRPEGPG 61
P+R G P P P S S+A + G + + P PP P RP
Sbjct: 368 PVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGA 427
Query: 62 PPRPATPSARR 72
PP P ++ R
Sbjct: 428 PPPPPPSTSIR 438
Score = 28.1 bits (61), Expect = 6.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Query: 191 GAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG 229
GAG G G G G F GGG G G G G G
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGG 102
Score = 27.7 bits (60), Expect = 8.5
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 39/92 (42%)
Query: 43 PAGGASPPPSPRSRPEGPG----------------------PPR-----------PATPS 69
P GG S P S P GPG PPR P PS
Sbjct: 130 PPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPS 189
Query: 70 ARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAP 101
RP + + P R P GPR +P
Sbjct: 190 TPRP------IQSSPHNRGSPPVPGGPRQPSP 215
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.4 bits (106), Expect = 4e-05
Identities = 37/124 (29%), Positives = 46/124 (37%), Gaps = 13/124 (10%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGP 62
P PR P G TP P P + G + +R + P P P SR P
Sbjct: 207 PGGPRQPSPGPTPPPFPGNRGT--ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKP 264
Query: 63 PRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPS 122
P P P RP V P Q ++P + PR A + +A PP PS
Sbjct: 265 PPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASS----------QAPPPPPPPS 314
Query: 123 R-GP 125
R GP
Sbjct: 315 RPGP 318
Score = 37.0 bits (84), Expect = 0.014
Identities = 42/136 (30%), Positives = 49/136 (36%), Gaps = 22/136 (16%)
Query: 2 SPLRPRGPHQGGTPRPLPASAGAQGSQAR---SGLRLCRTTQGRPAGGAS----PPPSPR 54
+P P P + G P PLP S+ R L L +T P+ G S PPPS R
Sbjct: 306 APPPPPPPSRPGPP-PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 55 -----SRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSR---PLQLAGPRDRAPARALH 106
P G P P P R S + A P SR +GPR P
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPP---- 420
Query: 107 ARTRMGRAARGPPAPS 122
R A PP PS
Sbjct: 421 --DRPSAGAPPPPPPS 434
Score = 35.0 bits (79), Expect = 0.053
Identities = 27/100 (27%), Positives = 30/100 (30%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
P P + P P P S R Q P SPP R PGP P
Sbjct: 161 PPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220
Query: 66 ATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARAL 105
P R + P S P P P+RAL
Sbjct: 221 PFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRAL 260
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP-PPSPRSRPEGPG 61
P+R G P P P S S+A + G + + P PP P RP
Sbjct: 368 PVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGA 427
Query: 62 PPRPATPSARR 72
PP P ++ R
Sbjct: 428 PPPPPPSTSIR 438
Score = 28.1 bits (61), Expect = 6.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Query: 191 GAGRGRRGRGESRGAFFMGGGAGAAGLRLRGIGARSANG 229
GAG G G G G F GGG G G G G G
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGG 102
Score = 27.7 bits (60), Expect = 8.5
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 39/92 (42%)
Query: 43 PAGGASPPPSPRSRPEGPG----------------------PPR-----------PATPS 69
P GG S P S P GPG PPR P PS
Sbjct: 130 PPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPS 189
Query: 70 ARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAP 101
RP + + P R P GPR +P
Sbjct: 190 TPRP------IQSSPHNRGSPPVPGGPRQPSP 215
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 16 RPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPR-SRPEGPGPPRPATPSA-RRP 73
R P G G S L +G PA A+P P P +RP P PPRP+ PS RP
Sbjct: 79 RRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSP-PPRPSLPSGPHRP 137
Query: 74 QGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
+ ++A +RPL P+ AR R R R A P A
Sbjct: 138 VLPPSALAAPRPPLARPL----PQGSVTAREQEQRPRSRRRAGAPEA 180
Score = 35.4 bits (80), Expect = 0.041
Identities = 52/179 (29%), Positives = 66/179 (36%), Gaps = 17/179 (9%)
Query: 12 GGTPRPLPASAGAQGSQARSG--LRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPATPS 69
GG R + G G G L + RPA A+ PP+PR RP A
Sbjct: 17 GGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQ 76
Query: 70 ARR----PQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPS--R 123
RR PQG G A P + + A AP+ R + PP PS
Sbjct: 77 PRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPG----PLPARPSSPPPRPSLPS 132
Query: 124 GPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGELQA 182
GP + V A+ A L G+ V R Q+ PR R +GA A G + A
Sbjct: 133 GPHRPVLPPSALAAPRPPLARPLPQGS--VTAREQEQRPRSR---RRAGAPEALGPVHA 186
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 16 RPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPR-SRPEGPGPPRPATPSA-RRP 73
R P G G S L +G PA A+P P P +RP P PPRP+ PS RP
Sbjct: 79 RRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSP-PPRPSLPSGPHRP 137
Query: 74 QGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
+ ++A +RPL P+ AR R R R A P A
Sbjct: 138 VLPPSALAAPRPPLARPL----PQGSVTAREQEQRPRSRRRAGAPEA 180
Score = 34.7 bits (78), Expect = 0.070
Identities = 56/196 (28%), Positives = 71/196 (36%), Gaps = 23/196 (11%)
Query: 12 GGTPRPLPASAGAQGSQARSG--LRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPATPS 69
GG R + G G G L + RPA A+ PP+PR RP A
Sbjct: 17 GGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQ 76
Query: 70 ARR----PQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPS--R 123
RR PQG G A P + + A AP+ R + PP PS
Sbjct: 77 PRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPG----PLPARPSSPPPRPSLPS 132
Query: 124 GPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGEL--- 180
GP + V A+ A L G+ V R Q+ PR R +GA A G
Sbjct: 133 GPHRPVLPPSALAAPRPPLARPLPQGS--VTAREQEQRPRSR---RRAGAPEALGPALTR 187
Query: 181 --QAWGAWPTW-CGAG 193
G+ +W CG G
Sbjct: 188 IHNVEGSKDSWNCGQG 203
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 40 QGRPAGGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRD- 98
+G P PPP P P P P P+ P+A P+G G S G A+RS LQ G
Sbjct: 88 RGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRG--GGASPG-ARRSDFLQKTGSNSF 144
Query: 99 RAPARALH--ARTRMGRAARGPPAPSRGPLKRV 129
R LH A R+ P P GP R+
Sbjct: 145 TVHPRGLHRGAGARLLSNGHSAPEPRAGPANRL 177
Score = 33.5 bits (75), Expect = 0.16
Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 4 LRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPP 63
+ PRG H+G R L A +A RL + P G P P PP
Sbjct: 146 VHPRGLHRGAGARLLSNGHSAPEPRAGPANRLAGSP---PGSGQWKPKVESGDPSLHPPP 202
Query: 64 RPATPSARRPQGLSAGVSAGPAQR 87
P TPSA S SA P+QR
Sbjct: 203 SPGTPSA---TPASPPASATPSQR 223
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Query: 40 QGRPAGGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRD- 98
+G P PPP P P P P P+ P+A P+G G S G A+RS LQ G
Sbjct: 88 RGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRG--GGASPG-ARRSDFLQKTGSNSF 144
Query: 99 RAPARALH--ARTRMGRAARGPPAPSRGPLKRV 129
R LH A R+ P P GP R+
Sbjct: 145 TVHPRGLHRGAGARLLSNGHSAPEPRAGPANRL 177
Score = 33.5 bits (75), Expect = 0.16
Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 4 LRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPP 63
+ PRG H+G R L A +A RL + P G P P PP
Sbjct: 146 VHPRGLHRGAGARLLSNGHSAPEPRAGPANRLAGSP---PGSGQWKPKVESGDPSLHPPP 202
Query: 64 RPATPSARRPQGLSAGVSAGPAQR 87
P TPSA S SA P+QR
Sbjct: 203 SPGTPSA---TPASPPASATPSQR 223
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 43.9 bits (102), Expect = 1e-04
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
+P+GP Q G P P QG + G R +GRP G PP +GP PP
Sbjct: 90 KPQGPPQQGG-HPPPPQGRPQGPPQQGGHP--RPPRGRPQG----PPQQGGHQQGPPPPP 142
Query: 65 PATPSARRPQGLSAGVSAGPAQRSRP 90
P P PQG G GP Q P
Sbjct: 143 PGKPQGPPPQG---GRPQGPPQGQSP 165
Score = 31.2 bits (69), Expect = 0.77
Identities = 35/125 (28%), Positives = 43/125 (34%), Gaps = 34/125 (27%)
Query: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPEGP--- 60
+GP GG A G Q + QG P G PP P+ +P+GP
Sbjct: 47 QGPPLGGQQSQPSAGDGNQDDGPQ---------QGPPQQGGQQQQGPPPPQGKPQGPPQQ 97
Query: 61 -GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPP 119
G P P PQG GP Q+ G R P + G +GPP
Sbjct: 98 GGHPPP-------PQGR----PQGPPQQ-------GGHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 120 APSRG 124
P G
Sbjct: 140 PPPPG 144
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 43.9 bits (102), Expect = 1e-04
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
+P+GP Q G P P QG + G R +GRP G PP +GP PP
Sbjct: 90 KPQGPPQQGG-HPPPPQGRPQGPPQQGGHP--RPPRGRPQG----PPQQGGHQQGPPPPP 142
Query: 65 PATPSARRPQGLSAGVSAGPAQRSRP 90
P P PQG G GP Q P
Sbjct: 143 PGKPQGPPPQG---GRPQGPPQGQSP 165
Score = 31.6 bits (70), Expect = 0.59
Identities = 35/125 (28%), Positives = 43/125 (34%), Gaps = 34/125 (27%)
Query: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPEGP--- 60
+GP GG A G Q + QG P G PP P+ +P+GP
Sbjct: 47 QGPPLGGQQSQPSAGDGNQNDGPQ---------QGPPQQGGQQQQGPPPPQGKPQGPPQQ 97
Query: 61 -GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPP 119
G P P PQG GP Q+ G R P + G +GPP
Sbjct: 98 GGHPPP-------PQGR----PQGPPQQ-------GGHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 120 APSRG 124
P G
Sbjct: 140 PPPPG 144
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 43.9 bits (102), Expect = 1e-04
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
+P+GP Q G P P QG + G R +GRP G PP +GP PP
Sbjct: 90 KPQGPPQQGG-HPPPPQGRPQGPPQQGGHP--RPPRGRPQG----PPQQGGHQQGPPPPP 142
Query: 65 PATPSARRPQGLSAGVSAGPAQRSRP 90
P P PQG G GP Q P
Sbjct: 143 PGKPQGPPPQG---GRPQGPPQGQSP 165
Score = 31.6 bits (70), Expect = 0.59
Identities = 35/125 (28%), Positives = 43/125 (34%), Gaps = 34/125 (27%)
Query: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPEGP--- 60
+GP GG A G Q + QG P G PP P+ +P+GP
Sbjct: 47 QGPPLGGQQSQPSAGDGNQNDGPQ---------QGPPQQGGQQQQGPPPPQGKPQGPPQQ 97
Query: 61 -GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPP 119
G P P PQG GP Q+ G R P + G +GPP
Sbjct: 98 GGHPPP-------PQGR----PQGPPQQ-------GGHPRPPRGRPQGPPQQGGHQQGPP 139
Query: 120 APSRG 124
P G
Sbjct: 140 PPPPG 144
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 43.5 bits (101), Expect = 2e-04
Identities = 39/131 (29%), Positives = 50/131 (38%), Gaps = 12/131 (9%)
Query: 1 MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP 60
+SPL P P G P P P G+ S S T A G + PR RP
Sbjct: 104 LSPLSPLSPEPPGAPVPQPLQPGSLRSPPDSEAYYGETDS--DADGPATQEKPR-RPRRR 160
Query: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPA 120
GP RP P A + + A PA + GP + +R G A + PPA
Sbjct: 161 GPTRPTPPGAPPDEVYLSDSPAEPAP-----TIPGPPSQGDSRVSSPSWEDGAALQPPPA 215
Query: 121 PS----RGPLK 127
+ GPL+
Sbjct: 216 EALLLPHGPLR 226
Score = 34.7 bits (78), Expect = 0.070
Identities = 32/91 (35%), Positives = 36/91 (39%), Gaps = 19/91 (20%)
Query: 2 SPLRPRGPHQGGTPRP-LPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP 60
+P RP P GG P P P SA A S A L S P P +RPE P
Sbjct: 554 APSRPVTP--GGAPEPPAPPSAAAMTSTASIFL--------------SAPLRPSARPEAP 597
Query: 61 --GPPRPATPSARRPQGLSAGVSAGPAQRSR 89
GP P PSAR + G Q +R
Sbjct: 598 APGPGAPEPPSAREQRISVPAARTGILQEAR 628
Score = 32.7 bits (73), Expect = 0.26
Identities = 46/180 (25%), Positives = 62/180 (34%), Gaps = 23/180 (12%)
Query: 15 PRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPATPSARRP- 73
PR A +G + G C Q P G S P P+ P P P TP P
Sbjct: 663 PRAGGAESGPEEDALSLGAEACNFMQ--PVGARSYKTLPHVTPKTPPPMAPKTPPPMTPK 720
Query: 74 -----------QGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAAR----GP 118
+GL G+ G A + + PR + L A+ R RA R G
Sbjct: 721 TPPPVAPKPPSRGLLDGLVNGAASSAGIPE--PPRLQGRGGELFAK-RQSRADRYVVEGT 777
Query: 119 PAPSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARG 178
P P GP R L SW ++ P + L+P A T +++G
Sbjct: 778 PGPGLGPRPRS--PSPTPSLPPSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPKAQSQG 835
Score = 32.3 bits (72), Expect = 0.35
Identities = 43/160 (26%), Positives = 59/160 (36%), Gaps = 36/160 (22%)
Query: 2 SPLRPRGPHQ--GGTPRPLPA---------SAGAQGSQARSGLRLCRTTQGRPA----GG 46
+P+ P Q GG P P P+ + G QG + + + R + A GG
Sbjct: 442 APVASPRPFQPGGGAPTPAPSIFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGG 501
Query: 47 ASPPPSPRSRPEGPGP------------PRPATPSARRPQG-LSAGVSAGPAQRSRPLQL 93
SP P P +GP P P +PS R G ++A S SRP+
Sbjct: 502 LSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSSLYIPAPSRPVTP 561
Query: 94 AG-PRDRAPARALHARTRMG-------RAARGPPAPSRGP 125
G P AP A + R + P AP+ GP
Sbjct: 562 GGAPEPPAPPSAAAMTSTASIFLSAPLRPSARPEAPAPGP 601
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 43.5 bits (101), Expect = 2e-04
Identities = 39/117 (33%), Positives = 42/117 (35%), Gaps = 22/117 (18%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGP 62
PLRP GP G P P P + GLR P PR P GP P
Sbjct: 420 PLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLR---------------GPLPRLLPPGPPP 464
Query: 63 PRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPP 119
RP P P G G+ GP R P +L P AP R M R PP
Sbjct: 465 GRPPGP----PPGPPPGLPPGPPPRGPPPRLPPP---APPGIPPPRPGMMRPPLVPP 514
Score = 36.6 bits (83), Expect = 0.018
Identities = 29/85 (34%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 40 QGRPAGGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDR 99
Q P PP P P GP P P P P GL G G RP + G R
Sbjct: 395 QSVPPSQIQAPPMPGPPPLGPPPAPPLRPPG-PPTGLPPGPPPGAPPFLRPPGMPGLRGP 453
Query: 100 APARALHARTRMGRAARGPPAPSRG 124
P R L GR PP P G
Sbjct: 454 LP-RLLPPGPPPGRPPGPPPGPPPG 477
Score = 34.3 bits (77), Expect = 0.091
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 49 PPPSPRSRPEG------PGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPA 102
PPP+P RP G PGPP P P RP G+ GP R P R P
Sbjct: 415 PPPAPPLRPPGPPTGLPPGPP-PGAPPFLRPPGMPG--LRGPLPRLLPPGPPPGRPPGPP 471
Query: 103 RALHARTRMGRAARGPP 119
G RGPP
Sbjct: 472 PGPPPGLPPGPPPRGPP 488
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 42.7 bits (99), Expect = 3e-04
Identities = 42/129 (32%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 6 PRGPH-QGGTPRPL-----PASAGAQGSQARSGLRLCRTTQGRPA-GGASPPPSPRSRPE 58
P+GP + G+P P P AG G G + + G P G + PP P +
Sbjct: 504 PKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDG 563
Query: 59 GPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRD-RAPARALHARTRMGRA-AR 116
PGPP P P AR G+ GP + AG R P A+ + G A A+
Sbjct: 564 RPGPPGP--PGARGQAGVMG--FPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQ 619
Query: 117 GPPAPSRGP 125
GPP P+ GP
Sbjct: 620 GPPGPA-GP 627
Score = 39.3 bits (90), Expect = 0.003
Identities = 42/127 (33%), Positives = 50/127 (39%), Gaps = 23/127 (18%)
Query: 3 PLRPRGPHQGGTPRPL-----PASAGAQGSQARSGLRLCRTTQGRP-AGGASPPPSPRSR 56
P P GP G P P+ P + GA+GS G G P A G PP P
Sbjct: 840 PPGPAGP--AGPPGPIGNVGAPGAKGARGSAGPPG------ATGFPGAAGRVGPPGPSGN 891
Query: 57 PEGPGPPRPA-TPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRA- 114
PGPP PA + P+G GPA RP ++ P PA + G A
Sbjct: 892 AGPPGPPGPAGKEGGKGPRG-----ETGPA--GRPGEVGPPGPPGPAGEKGSPGADGPAG 944
Query: 115 ARGPPAP 121
A G P P
Sbjct: 945 APGTPGP 951
Score = 39.3 bits (90), Expect = 0.003
Identities = 36/110 (32%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 23 GAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVS- 81
GA+GS R G + +G G A PP +P + P PGP PA S R + AG +
Sbjct: 1019 GAEGSPGRDGSPGAKGDRGE-TGPAGPPGAPGA-PGAPGPVGPAGKSGDRGETGPAGPAG 1076
Query: 82 -AGPAQRSRPLQLAGPR-DRAPARALHARTRMGR----AARGPPAPSRGP 125
GP P GPR D+ R G +GPP P P
Sbjct: 1077 PVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSP 1126
Score = 37.7 bits (86), Expect = 0.008
Identities = 44/145 (30%), Positives = 53/145 (36%), Gaps = 28/145 (19%)
Query: 6 PRGPH-QGGTPRPLPASAGAQGSQARSGLRLCRTTQGRP--AG--------GASPPPSPR 54
P GP Q G P P P GA+G G + G P AG GA P
Sbjct: 555 PPGPAGQDGRPGP-PGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKD 613
Query: 55 SRPEGPGPPRPATPSARRP----------QGLSAGVSAGPAQRSRPLQLAGPRDRAPARA 104
GPP PA P+ R QGL G + P + +P + P D
Sbjct: 614 GEAGAQGPPGPAGPAGERGEQGPAGSPGFQGL-PGPAGPPGEAGKPGEQGVPGDLGAPGP 672
Query: 105 LHARTRMG----RAARGPPAPSRGP 125
AR G R +GPP P+ GP
Sbjct: 673 SGARGERGFPGERGVQGPPGPA-GP 696
Score = 36.2 bits (82), Expect = 0.024
Identities = 38/126 (30%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 1 MSPLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP 60
+ P+ RGP PR G QG + G R QG P SP S GP
Sbjct: 1078 VGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGP 1137
Query: 61 GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAAR-GPP 119
PR SA P G++ P P+ GPR R G A GPP
Sbjct: 1138 AGPRGPPGSAGAPG--KDGLNGLPG----PIGPPGPRGRT-----------GDAGPVGPP 1180
Query: 120 APSRGP 125
P P
Sbjct: 1181 GPPGPP 1186
Score = 34.3 bits (77), Expect = 0.091
Identities = 60/230 (26%), Positives = 74/230 (32%), Gaps = 46/230 (20%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQG--------RPAGGASPPPSPRS-- 55
P GP P P + GA+G G R QG PAG A P +P +
Sbjct: 333 PPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADG 392
Query: 56 RPEGPG-------PPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHAR 108
+P G P P AR P G G P + + P + A
Sbjct: 393 QPGAKGANGAPGIAGAPGFPGARGPSG-PQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEP 451
Query: 109 TRMGRAARGPPAPSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAG 168
+G +GPP P+ KR RG P T P G
Sbjct: 452 GPVG--VQGPPGPAGEEGKR----------------GARGEPGP--------TGLPGPPG 485
Query: 169 ETSGARRARGELQAWG-AWPTWCGAGRGRRGRGESRGAFFMGGGAGAAGL 217
E G +RG A G A P RG G +G+ G G AGL
Sbjct: 486 ERGGP-GSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGL 534
Score = 33.9 bits (76), Expect = 0.12
Identities = 26/77 (33%), Positives = 28/77 (36%), Gaps = 12/77 (15%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLR--------LCRTTQGRPAGGASPPPSPRSRP 57
P G PR P SAGA G +GL RT P G PP P P
Sbjct: 1131 PSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVG----PPGPPGPP 1186
Query: 58 EGPGPPRPATPSARRPQ 74
PGPP + PQ
Sbjct: 1187 GPPGPPSAGFDFSFLPQ 1203
Score = 33.1 bits (74), Expect = 0.20
Identities = 65/234 (27%), Positives = 81/234 (34%), Gaps = 44/234 (18%)
Query: 15 PRPLPASAGAQGSQARSGLRLCRTTQGRP-------------AGGASPPPSPRSRPEGP- 60
P+ P S G G+ + G R +GRP A GA+ PP P + P GP
Sbjct: 285 PKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGP-TGPAGPP 343
Query: 61 ------GPPRPATPSARR----PQGLSAGVS-AGPAQRSRPLQLAGPRDRAPARALHART 109
G A P R PQG+ GPA + P G + A+ +
Sbjct: 344 GFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAP 403
Query: 110 RMGRA-----ARGPPAPS--RGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTP 162
+ A ARGP P GP + + +G PV +
Sbjct: 404 GIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPV-----GVQG 458
Query: 163 RHRPAGETSGARRARGELQAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAG 216
PAGE G R ARGE PT G RG SRG G AG G
Sbjct: 459 PPGPAGE-EGKRGARGE-----PGPTGLPGPPGERGGPGSRGFPGADGVAGPKG 506
Score = 32.7 bits (73), Expect = 0.26
Identities = 37/118 (31%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
P GP R P G G +G G+P GA P GPP P
Sbjct: 786 PSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQP--GAKGEPGDAGAKGDAGPPGP 843
Query: 66 ATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAAR-GPPAPS 122
A P+ P G V A A+ +R AGP A G A R GPP PS
Sbjct: 844 AGPAG--PPGPIGNVGAPGAKGAR--GSAGPPG--------ATGFPGAAGRVGPPGPS 889
Score = 32.0 bits (71), Expect = 0.45
Identities = 33/124 (26%), Positives = 42/124 (33%), Gaps = 22/124 (17%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
P+G P+ GA GS + G+R G P +P S P GP P
Sbjct: 741 PKGDRGDAGPK------GADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTG 794
Query: 66 A--TPSARRPQGL--SAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAP 121
A P R G AG + P +P P D + GPP P
Sbjct: 795 ARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAG-----------AKGDAGPPGP 843
Query: 122 SRGP 125
+ GP
Sbjct: 844 A-GP 846
Score = 30.0 bits (66), Expect = 1.7
Identities = 39/148 (26%), Positives = 49/148 (33%), Gaps = 33/148 (22%)
Query: 3 PLRPRGPHQGGTPRPLPASA--GAQGSQ---------------------ARSGLRLCRTT 39
P P+GP GG P P S GA GS+ G R R
Sbjct: 417 PSGPQGP--GGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGE 474
Query: 40 QGRPAGGASPP-----PSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLA 94
G P G PP P R P G P P+ R AG P + RP +
Sbjct: 475 PG-PTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAG 533
Query: 95 GPRDRAPARALHARTRMGRAARGPPAPS 122
P + + + G+ GPP P+
Sbjct: 534 LPGAKGLTGSPGSPGPDGKT--GPPGPA 559
Score = 29.3 bits (64), Expect = 2.9
Identities = 37/123 (30%), Positives = 39/123 (31%), Gaps = 26/123 (21%)
Query: 18 LPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPP----RPATPSARRP 73
LP +G G Q SG A G PP P P GPP R P A
Sbjct: 975 LPGPSGEPGKQGPSG-----------ASGERGPPGPMGPPGLAGPPGESGREGAPGAEGS 1023
Query: 74 QGLSAGVSA-------GPA-QRSRPLQLAGPRDRAPARALHARTRMGRAA-RGP--PAPS 122
G A GPA P P PA R G A GP P +
Sbjct: 1024 PGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGA 1083
Query: 123 RGP 125
RGP
Sbjct: 1084 RGP 1086
Score = 28.9 bits (63), Expect = 3.8
Identities = 30/130 (23%), Positives = 43/130 (33%), Gaps = 18/130 (13%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGP-- 60
P +G P P + G QG + G+ +G P PS +GP
Sbjct: 930 PAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSG 989
Query: 61 -----GPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAA 115
GPP P P G++ P + R + A + +P R + R
Sbjct: 990 ASGERGPPGPMGP---------PGLAGPPGESGR--EGAPGAEGSPGRDGSPGAKGDRGE 1038
Query: 116 RGPPAPSRGP 125
GP P P
Sbjct: 1039 TGPAGPPGAP 1048
Score = 28.5 bits (62), Expect = 5.0
Identities = 56/217 (25%), Positives = 65/217 (29%), Gaps = 25/217 (11%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGP 62
P P P G P P P G Q G ++T G G P PR P PG
Sbjct: 138 PGLPGPPGPPGPPGP-PGLGGNFAPQLSYGYDE-KSTGGISVPGPMGPSGPRGLPGPPGA 195
Query: 63 PRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGR-AARGPPAP 121
P P + G S R P D A + GR RGPP P
Sbjct: 196 PGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEA------GKPGRPGERGPPGP 249
Query: 122 --SRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQLTPRHRPAGETSGARRARGE 179
+RG S +G P + + +P A G R GE
Sbjct: 250 QGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGE 309
Query: 180 LQAWGAWPTWCGAGRGRRGRGESRGAFFMGGGAGAAG 216
RGR G GA G GAAG
Sbjct: 310 --------------RGRPGAPGPAGARGNDGATGAAG 332
>gi|239754468 PREDICTED: hypothetical protein [Homo sapiens]
Length = 146
Score = 42.7 bits (99), Expect = 3e-04
Identities = 49/145 (33%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 3 PLRPRGP-HQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPE 58
PL R P HQ + R L G+ S+ SG GR AG +P PP PRS PE
Sbjct: 18 PLARRLPGHQRASGRHLRRRRGSCSSRRLSG-------PGRRAGAPTPRGPPPRPRSFPE 70
Query: 59 GPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALH-ARTRMGRAARG 117
GP R G +AGP+ R+RP + P A R L + G R
Sbjct: 71 -TGPAR-------------LGAAAGPSSRARPSRGERPWLAAQLRGLQVGQCCWGHRRRS 116
Query: 118 PPAPSRGPLKRVTWTCAVRRLWTSW 142
P P P R A RRL W
Sbjct: 117 APEPV--PAVRTRVHGASRRLVCRW 139
>gi|239749023 PREDICTED: hypothetical protein XP_002346884 [Homo
sapiens]
Length = 159
Score = 42.7 bits (99), Expect = 3e-04
Identities = 49/145 (33%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 3 PLRPRGP-HQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPE 58
PL R P HQ + R L G+ S+ SG GR AG +P PP PRS PE
Sbjct: 31 PLARRLPGHQRASGRHLRRRRGSCSSRRLSG-------PGRRAGAPTPRGPPPRPRSFPE 83
Query: 59 GPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALH-ARTRMGRAARG 117
GP R G +AGP+ R+RP + P A R L + G R
Sbjct: 84 -TGPAR-------------LGAAAGPSSRARPSRGERPWLAAQLRGLQVGQCCWGHRRRS 129
Query: 118 PPAPSRGPLKRVTWTCAVRRLWTSW 142
P P P R A RRL W
Sbjct: 130 APEPV--PAVRTRVHGASRRLVCRW 152
>gi|239743042 PREDICTED: hypothetical protein XP_002342725 [Homo
sapiens]
Length = 159
Score = 42.7 bits (99), Expect = 3e-04
Identities = 49/145 (33%), Positives = 58/145 (40%), Gaps = 28/145 (19%)
Query: 3 PLRPRGP-HQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASP---PPSPRSRPE 58
PL R P HQ + R L G+ S+ SG GR AG +P PP PRS PE
Sbjct: 31 PLARRLPGHQRASGRHLRRRRGSCSSRRLSG-------PGRRAGAPTPRGPPPRPRSFPE 83
Query: 59 GPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALH-ARTRMGRAARG 117
GP R G +AGP+ R+RP + P A R L + G R
Sbjct: 84 -TGPAR-------------LGAAAGPSSRARPSRGERPWLAAQLRGLQVGQCCWGHRRRS 129
Query: 118 PPAPSRGPLKRVTWTCAVRRLWTSW 142
P P P R A RRL W
Sbjct: 130 APEPV--PAVRTRVHGASRRLVCRW 152
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 42.7 bits (99), Expect = 3e-04
Identities = 41/132 (31%), Positives = 49/132 (37%), Gaps = 32/132 (24%)
Query: 5 RPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPR 64
R + P +G TP P R +G PA A+ P P P P P
Sbjct: 98 RVQPPRRGATPPAPP-----------------RAPRGAPAAAAAAAPPPTPAPPPPPAPV 140
Query: 65 PATPSARRPQGLSAGVSAGP----------AQRSRPLQLAGPRDRA-PARALHARTRMGR 113
A AR P+ +A +A P AQR+ PL P A PA A A R
Sbjct: 141 AAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAP 200
Query: 114 ----AARGPPAP 121
AAR PP P
Sbjct: 201 PPAVAAREPPLP 212
Score = 40.4 bits (93), Expect = 0.001
Identities = 62/254 (24%), Positives = 87/254 (34%), Gaps = 77/254 (30%)
Query: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
PR P PA A +G R PA A PP P P+ P PP+
Sbjct: 169 PRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPP----PAVAAREPPLPPP-PQPPAPPQQ 223
Query: 66 ATPSARRPQGLSAGVSAGPAQRSRPLQL------------AGPR-----------DRAPA 102
P +PQ G + +RP+ L AG R + A A
Sbjct: 224 QQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAA 283
Query: 103 RALHARTRMG--------RAARGPPAPSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVL 154
R RTR+G R R PPA S P + + RGG + VL
Sbjct: 284 RGRLERTRLGALALPRGDRPGRAPPAASARPSR-----------------SKRGGEERVL 326
Query: 155 DRRQ------------------QLTPRHRPAG----ETSGARRARGELQAWGAWPTWCGA 192
++ + ++ RPAG + +G R + + W T CG
Sbjct: 327 EKEEEEDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGERGPQSAKERVKEW-TPCGP 385
Query: 193 GRGR-RGRGESRGA 205
+G+ GRG + G+
Sbjct: 386 HQGQDEGRGPAPGS 399
Score = 32.0 bits (71), Expect = 0.45
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 45 GGASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARA 104
G S + R +P G PA P A R +A +A P + P A APARA
Sbjct: 89 GSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA 148
Query: 105 LHARTRMGRAARGPPAP 121
A AA PP+P
Sbjct: 149 PRA---AAAAATAPPSP 162
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 42.4 bits (98), Expect = 3e-04
Identities = 39/130 (30%), Positives = 47/130 (36%), Gaps = 11/130 (8%)
Query: 2 SPLRPRG--PHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGA------SPPPSP 53
SP P G P + + P P AG G + T RPAG A SP +P
Sbjct: 525 SPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPS--ETPGPRPAGPAGDEPAESPSETP 582
Query: 54 RSRPEGPGPPRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGR 113
P GP PA + P AG AG P + GPR PA A +
Sbjct: 583 GPSPAGPTRDEPAESPSETPGPRPAG-PAGDEPAESPSETPGPRPAGPAGDEPAESPSET 641
Query: 114 AARGPPAPSR 123
P P+R
Sbjct: 642 PGPSPAGPTR 651
Score = 36.2 bits (82), Expect = 0.024
Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 10/115 (8%)
Query: 13 GTPRPLPASAGAQGSQARSGLRLCRTTQGR--PAGGA--SPPPSPRSRPEGPGPPRPATP 68
G+P P S + + +G+ T+GR P G SP +P P GP PA
Sbjct: 483 GSPAP---SGHPKAGHSENGVE--EDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAES 537
Query: 69 SARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPSR 123
+ P AG AG P + GPR PA A + P P+R
Sbjct: 538 PSETPGPRPAG-PAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTR 591
Score = 35.0 bits (79), Expect = 0.053
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 3 PLRPRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGP 62
P P G +P P + A ++ T RPAG A P+ S E PG
Sbjct: 566 PAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPA-ESPSETPG- 623
Query: 63 PRPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARA 104
PRPA P+ P S + GP+ AGP PA+A
Sbjct: 624 PRPAGPAGDEP-AESPSETPGPSP-------AGPTRDEPAKA 657
Score = 34.7 bits (78), Expect = 0.070
Identities = 34/119 (28%), Positives = 42/119 (35%), Gaps = 21/119 (17%)
Query: 8 GPHQG--GTPR--PLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPP 63
GP +G G+P P P+ AG G + PA S P PR P GP
Sbjct: 509 GPKEGTPGSPSETPGPSPAGPAGDE--------------PAESPSETPGPR--PAGPAGD 552
Query: 64 RPATPSARRPQGLSAGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPPAPS 122
PA + P AG AG P + GP P R A + P P+
Sbjct: 553 EPAESPSETPGPRPAG-PAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPA 610
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,262,270
Number of Sequences: 37866
Number of extensions: 950641
Number of successful extensions: 18331
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 1769
Number of HSP's that attempted gapping in prelim test: 9462
Number of HSP's gapped (non-prelim): 7445
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.